Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0015053

Physical Location & Seq

Genomic Coordinates Reverse (-)

1582273 .. 1584372

Gene Structure 2100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG021600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGCTCAAAACCCACATAGCTCCGGATACCCACACCTTCCCTAATCTGCTCAAAGCTTGCACCTCCCTGAACCTCTTTTGTTATGGTGTCTCGTGTCATCAATGCATTGTTGTTAACGGGTTTTCTTCGGATGCTTACATTGCCTCTTCATTGATCAACTTCTATGCGAAATTTGGTTATGCCCAAAATGCACGCAAGGTGTTCGATACAATGGCGGAAAGAAACGTTGTTCCTTGGACTTCCATTATCGGATGCTATTCGCGTGCCGGAAGTGTTGGAGTTGCGTTTGAGATGTTTGGTGATATGCGGCGTGAGGGAGTTCAACCCAGTTCGGTTACTCTGCTCAGCTTGCTCTCTGGAGCTTCGGAACTTGCCCATGTGCAGTGTTTGCATGGTTGTGCTGTGTTGTATGGTTTTGAGTCTGATATGTCTTTGATGAATTCCATGTTGAATGTGTATTGTAAATGTGGGAGAGTTGAAGATGGTAGGGACTTGTTTGAGTATTTGAATCGAAGAGACATTGTTTCGTGGAACTCATTGATTTCAGGCTATGCACAGAGTGGAAATATCAGAGAAGTGTTCCAGCTTTTATTTAAGATGAGGGCTGAAGGTGCGGAACCTGATAAGCAGACATATGCGACTGCGGTGTCTGTGGCCGCAACACAGAGTAATCTTAAATGGGGAAAGTCTGTGCATGGACAGATTTTGAGAACAGGATTTGAATTGGATTCCCATGTCGAAACAGCTCTTATTGTTATGTACTTGAAGTGCAGGAATATTGATCTTGCGTTTCAGATATTTGAAAGGACAATGCATAAGGATGTGGTTCTGTGGACGGCCATGATCTCAGGGCTTGTGCAAAATGATTCTGCAGACAGGGCTCTAATGGTTTTCTGTCAGATGTTGGAATCGAGAACAGAACCGTCTAGTGCCACCATAGCTAGTGCTCTTGCAGCTTGTGCGCAACTAGGTTCTATTGATTTAGGAACCTCAATTCATGGTTATGTGTTGAGGCAAGGAATGAGACTTGACATTCCTGCCCAAAACTCCCTTGTTACCATGTATGCAAAGTGTGCACGTTTGGATCGAAGTCGCGCTATTTTCGAAAATATGAGCAAAAGAGATTTGGTTTCTTGGAATGCTATAGTTGCTGGATATGCTCAAAATGGTCATATATGCGAGGCTCTGGTACTTTTCTCCGAGATGAGGGCAACTCTTCAGAAGCCTGATTCGTTAACTGTGGTCTCCCTTCTCCAAGCTTGTGCTTCCACTGGGGCTCTCCATCAAGGAAAGTGGATCCACAACTTCATTATTAGAAGTTGCCTCAGACCATGCATCTTGGTAGACACAACTCTGGTCGACATGTACTCAAAATGCGGCGACATGGATAAAGCTCACAAGTGCTTTGTTGAGATGTCTGACCGGGATCTGGTGTCATGGAGCACTATTATTTCTGGTTATGGTTGTCATGGCAAAGCAGAGACTGCTTTGGAGTTGTATGCAGAGCTTCTGCAGACTGGAATCAAACCAAATCATGTCATTTTCCTCTCAATTCTTTCAGCTTGTAGTCATAATGGTCTTGTCGACAAGGGTTTGAGCATATACCAGTCGATGACTGAAGATTTTGGTATTGCACCAAGCCTTGAACATCGAGCTTGCATTGTTGATCTCCTCAGTCGAGCTGGAAGGGTGGAAGAGGCATATGATTTCTACAAGAGGGTGTTTCCGGAGCCTGCAGTTGATGTCTTGGGCATACTTCTCGATGCCTGTCGAACCAAGGGCAATGAGGTTCTCGTGGACATTATCGCAGGAGAAATTTTGAGGCTGAGACCTGTGGATGCTGGAAACTATGTGCAATTGGCGCATACCTATGCTTCGATGAACAGATGGGATGGCGTTGGTGAAGCATGGAACCAAATGAAGTCTCTTGGCTTGAAAAAACTCCCTGGTTGGAGTTTTATCGAATTACATGGGACTATCACTACATTCTTCACAGATCACAATTCAAATCCTCAGATTGATGATATAGTGTCACTATTGAAAATTTTGAGCGAGGAAATGAGGAAATCAAGCCTCCGCAGTTGGGATGGCGTTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1068 PPR PPR_2

Protein Analysis

699

Amino Acids

77.47

Weight (kDa)

6.22

Isoelectric Point (pI)

42.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	74 - 120	2.7e-09	PPR repeat family
PPR_2	PF13041	172 - 214	2.9e-10	PPR repeat family
PPR	PF01535	175 - 204	1.5e-07	PPR repeat
PPR_2	PF13041	273 - 321	4.1e-07	PPR repeat family
PPR_2	PF13041	375 - 422	3.3e-09	PPR repeat family
PPR_2	PF13041	476 - 523	5.8e-07	PPR repeat family
E_motif	PF20431	605 - 655	2.5e-07	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04370
fragaria_vesca	FvH4_3g01610
malus_domestica	MD10G1325500.v1.1
prunus_persica	Prupe.4G016600_v2.0.a1
pyrus_communis	pycom10g27520
rosa_chinensis	RchiOBHm_Chr5g0002401
rosa_laevigata	RLG00000031029
rosa_multiflora	Rmu_co8285719.1_g000001 Rmu_sc0001717.1_g000003
rosa_roxburghii	Rroxscaffold_1G00073450
rosa_rugosa	Rorug04G0396000
rosa_samantha	Rh5AG018800 Rh5BG021600 Rh5CG020700 Rh5DG019800
rosa_wichuraiana	Rw5G001760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	646
Acc16I	TGCGCA	1 cut(s)	963
AccI	GTMKAC	3 cut(s)	1344, 1359, 1584
AccII	CGCG	2 cut(s)	262, 1095
AccIII	TCCGGA	2 cut(s)	22, 1726
AciI	CCGC	7 cut(s)	215, 307, 614, 644, 657, 1377, 2077
AclI	AACGTT	1 cut(s)	225
AclWI	GGATC	4 cut(s)	1092, 1291, 1304, 1434
AcoI	YGGCCR	2 cut(s)	654, 837
AcsI	RAATTY	4 cut(s)	170, 439, 1815, 2043
AcuI	CTGAAG	3 cut(s)	627, 1202, 1638
AdeI	CACNNNGTG	1 cut(s)	560
AfaI	GTAC	3 cut(s)	761, 1191, 1367
AfiI	CCNNNNNNNGG	3 cut(s)	1206, 1429, 2083
AflIII	ACRYGT	1 cut(s)	1362
AjnI	CCWGG	1 cut(s)	1945
Alw21I	GWGCWC	3 cut(s)	949, 1078, 1445
Alw26I	GTCTC	7 cut(s)	94, 510, 1018, 1249, 1475, 1822, 1929
Alw44I	GTGCAC	1 cut(s)	1074
AlwI	GGATC	4 cut(s)	1092, 1291, 1304, 1434
AlwNI	CAGNNNCTG	1 cut(s)	1484
Aor13HI	TCCGGA	2 cut(s)	22, 1726
AoxI	GGCC	2 cut(s)	654, 837
ApaLI	GTGCAC	1 cut(s)	1074
ApeKI	GCWGC	1 cut(s)	953
ApoI	RAATTY	4 cut(s)	170, 439, 1815, 2043
AspLEI	GCGC	3 cut(s)	964, 1097, 1864
AsuC2I	CCSGG	1 cut(s)	1424
AsuHPI	GGTGA	2 cut(s)	311, 1913
AsuII	TTCGAA	1 cut(s)	1104
BaeGI	GKGCMC	1 cut(s)	1078
BamHI	GGATCC	1 cut(s)	1296
BanII	GRGCYC	2 cut(s)	883, 1279
BauI	CACGAG	2 cut(s)	91, 1793
Bbv12I	GWGCWC	3 cut(s)	949, 1078, 1445
BbvI	GCAGC	1 cut(s)	965
BccI	CCATC	5 cut(s)	476, 1290, 1881, 1886, 2081
BceAI	ACGGC	1 cut(s)	852
BcgI	CGANNNNNNTGC	4 cut(s)	184, 218, 1741, 1775
BciT130I	CCWGG	1 cut(s)	1947
BciVI	GTATCC	1 cut(s)	19
BclI	TGATCA	1 cut(s)	153
BcnI	CCSGG	1 cut(s)	1424
BcoDI	GTCTC	7 cut(s)	94, 510, 1018, 1249, 1475, 1822, 1929
BfaI	CTAG	3 cut(s)	927, 942, 968
BfmI	CTRYAG	4 cut(s)	870, 1143, 1511, 1734
BfuI	GTATCC	1 cut(s)	19
BisI	GCNGC	4 cut(s)	308, 657, 954, 1378
BlpI	GCTNAGC	1 cut(s)	344
BlsI	GCNGC	4 cut(s)	309, 658, 955, 1379
Bme1390I	CCNGG	2 cut(s)	1424, 1947
BmiI	GGNNCC	5 cut(s)	618, 988, 1298, 1731, 1913
BmrFI	CCNGG	2 cut(s)	1424, 1947
BmrI	ACTGGG	2 cut(s)	321, 1281
BmsI	GCATC	5 cut(s)	121, 242, 1344, 1753, 1828
BmuI	ACTGGG	2 cut(s)	321, 1281
BplI	GAGNNNNNCTC	2 cut(s)	1198, 1230
BpmI	CTGGAG	1 cut(s)	378
Bpu1102I	GCTNAGC	1 cut(s)	344
Bpu14I	TTCGAA	1 cut(s)	1104
BpuMI	CCSGG	1 cut(s)	1424
BsaI	GGTCTC	2 cut(s)	1249, 1822
BsaJI	CCNNGG	3 cut(s)	233, 1776, 1945
BsaWI	WCCGGW	2 cut(s)	22, 1726
Bsc4I	CCNNNNNNNGG	3 cut(s)	1206, 1429, 2083
Bse1I	ACTGG	4 cut(s)	327, 1276, 1522, 1606
Bse3DI	GCAATG	2 cut(s)	138, 1789
BseAI	TCCGGA	2 cut(s)	22, 1726
BseBI	CCWGG	1 cut(s)	1947
BseDI	CCNNGG	3 cut(s)	233, 1776, 1945
BseGI	GGATG	6 cut(s)	136, 257, 826, 1843, 1897, 2092
BseLI	CCNNNNNNNGG	3 cut(s)	1206, 1429, 2083
BseMI	GCAATG	2 cut(s)	138, 1789
BseMII	CTCAG	6 cut(s)	358, 861, 1339, 1687, 1817, 2027
BseNI	ACTGG	4 cut(s)	327, 1276, 1522, 1606
BseRI	GAGGAG	1 cut(s)	1661
BseSI	GKGCMC	1 cut(s)	1078
BseXI	GCAGC	1 cut(s)	965
BsgI	GTGCAG	2 cut(s)	401, 790
Bsh1236I	CGCG	2 cut(s)	262, 1095
BshFI	GGCC	2 cut(s)	656, 839
BsiHKAI	GWGCWC	3 cut(s)	949, 1078, 1445
BsiSI	CCGG	4 cut(s)	23, 267, 1423, 1727
BslFI	GGGAC	2 cut(s)	503, 1987
BslI	CCNNNNNNNGG	3 cut(s)	1206, 1429, 2083
BsmAI	GTCTC	7 cut(s)	94, 510, 1018, 1249, 1475, 1822, 1929
BsmFI	GGGAC	2 cut(s)	503, 1987
BsmI	GAATGC	1 cut(s)	1144
BsnI	GGCC	2 cut(s)	656, 839
Bso31I	GGTCTC	2 cut(s)	1249, 1822
Bsp119I	TTCGAA	1 cut(s)	1104
Bsp1286I	GDGCHC	5 cut(s)	883, 949, 1078, 1279, 1445
Bsp13I	TCCGGA	2 cut(s)	22, 1726
Bsp143I	GATC	8 cut(s)	153, 781, 843, 1084, 1296, 1426, 1666, 1996
Bsp1720I	GCTNAGC	1 cut(s)	344
BspACI	CCGC	7 cut(s)	215, 307, 614, 644, 657, 1377, 2077
BspANI	GGCC	2 cut(s)	656, 839
BspCNI	CTCAG	6 cut(s)	357, 860, 1338, 1686, 1818, 2026
BspEI	TCCGGA	2 cut(s)	22, 1726
BspFNI	CGCG	2 cut(s)	262, 1095
BspLI	GGNNCC	5 cut(s)	618, 988, 1298, 1731, 1913
BspMAI	CTGCAG	3 cut(s)	874, 1515, 1738
BspPI	GGATC	4 cut(s)	1092, 1291, 1304, 1434
BspT104I	TTCGAA	1 cut(s)	1104
BspTNI	GGTCTC	2 cut(s)	1249, 1822
BsrDI	GCAATG	2 cut(s)	138, 1789
BsrI	ACTGG	4 cut(s)	327, 1276, 1522, 1606
BssECI	CCNNGG	3 cut(s)	233, 1776, 1945
BssMI	GATC	8 cut(s)	153, 781, 843, 1084, 1296, 1426, 1666, 1996
BssSI	CACGAG	2 cut(s)	91, 1793
BssT1I	CCWWGG	2 cut(s)	233, 1776
Bst2BI	CACGAG	2 cut(s)	91, 1793
Bst2UI	CCWGG	1 cut(s)	1947
Bst4CI	ACNGT	2 cut(s)	924, 1240
Bst6I	CTCTTC	4 cut(s)	151, 508, 1221, 1689
BstAPI	GCANNNNNTGC	4 cut(s)	388, 959, 1073, 1484
BstBI	TTCGAA	1 cut(s)	1104
BstC8I	GCNNGC	6 cut(s)	58, 193, 264, 350, 1657, 1734
BstDEI	CTNAG	6 cut(s)	344, 847, 1325, 1673, 1826, 2013
BstF5I	GGATG	6 cut(s)	136, 257, 826, 1843, 1897, 2092
BstFNI	CGCG	2 cut(s)	262, 1095
BstHHI	GCGC	3 cut(s)	964, 1097, 1864
BstKTI	GATC	8 cut(s)	156, 784, 846, 1087, 1299, 1429, 1669, 1999
BstMAI	GTCTC	7 cut(s)	94, 510, 1018, 1249, 1475, 1822, 1929
BstMBI	GATC	8 cut(s)	153, 781, 843, 1084, 1296, 1426, 1666, 1996
BstNI	CCWGG	1 cut(s)	1947
BstNSI	RCATGY	1 cut(s)	1366
BstSCI	CCNGG	2 cut(s)	1422, 1945
BstSFI	CTRYAG	4 cut(s)	870, 1143, 1511, 1734
BstSLI	GKGCMC	1 cut(s)	1078
BstUI	CGCG	2 cut(s)	262, 1095
BstV1I	GCAGC	1 cut(s)	965
BstX2I	RGATCY	2 cut(s)	1296, 1426
BstYI	RGATCY	2 cut(s)	1296, 1426
BsuI	GTATCC	1 cut(s)	19
BsuRI	GGCC	2 cut(s)	656, 839
BtsCI	GGATG	6 cut(s)	136, 257, 826, 1843, 1897, 2092
BtsI	GCAGTG	1 cut(s)	389
BtsIMutI	CAGTG	2 cut(s)	389, 1269
Cac8I	GCNNGC	6 cut(s)	58, 193, 264, 350, 1657, 1734
CaiI	CAGNNNCTG	1 cut(s)	1484
CfoI	GCGC	3 cut(s)	964, 1097, 1864
Csp6I	GTAC	3 cut(s)	760, 1190, 1366
CspCI	CAANNNNNGTGG	2 cut(s)	1274, 1309
CviQI	GTAC	3 cut(s)	760, 1190, 1366
DdeI	CTNAG	6 cut(s)	344, 847, 1325, 1673, 1826, 2013
DpnI	GATC	8 cut(s)	155, 783, 845, 1086, 1298, 1428, 1668, 1998
DpnII	GATC	8 cut(s)	153, 781, 843, 1084, 1296, 1426, 1666, 1996
DraIII	CACNNNGTG	1 cut(s)	560
DrdI	GACNNNNNNGTC	1 cut(s)	646
DseDI	GACNNNNNNGTC	1 cut(s)	646
EaeI	YGGCCR	2 cut(s)	654, 837
Eam1104I	CTCTTC	4 cut(s)	151, 508, 1221, 1689
EarI	CTCTTC	4 cut(s)	151, 508, 1221, 1689
EciI	GGCGGA	1 cut(s)	230
Eco130I	CCWWGG	2 cut(s)	233, 1776
Eco24I	GRGCYC	2 cut(s)	883, 1279
Eco31I	GGTCTC	2 cut(s)	1249, 1822
Eco57I	CTGAAG	3 cut(s)	627, 1202, 1638
EcoRI	GAATTC	1 cut(s)	439
EcoRII	CCWGG	1 cut(s)	1945
EcoT14I	CCWWGG	2 cut(s)	233, 1776
EcoT22I	ATGCAT	3 cut(s)	107, 816, 1337
EcoT38I	GRGCYC	2 cut(s)	883, 1279
ErhI	CCWWGG	2 cut(s)	233, 1776
FaqI	GGGAC	2 cut(s)	503, 1987
FauNDI	CATATG	2 cut(s)	634, 1702
FbaI	TGATCA	1 cut(s)	153
FblI	GTMKAC	3 cut(s)	1344, 1359, 1584
Fnu4HI	GCNGC	4 cut(s)	308, 657, 954, 1378
FokI	GGATG	5 cut(s)	143, 264, 833, 1850, 1904
FriOI	GRGCYC	2 cut(s)	883, 1279
Fsp4HI	GCNGC	4 cut(s)	308, 657, 954, 1378
FspBI	CTAG	3 cut(s)	927, 942, 968
FspI	TGCGCA	1 cut(s)	963
GlaI	GCGC	3 cut(s)	963, 1096, 1863
GluI	GCNGC	4 cut(s)	308, 657, 954, 1378
GsuI	CTGGAG	1 cut(s)	378
HaeIII	GGCC	2 cut(s)	656, 839
HapII	CCGG	4 cut(s)	23, 267, 1423, 1727
HhaI	GCGC	3 cut(s)	964, 1097, 1864
Hin6I	GCGC	3 cut(s)	962, 1095, 1862
HinP1I	GCGC	3 cut(s)	962, 1095, 1862
HincII	GTYRAC	4 cut(s)	115, 1236, 1360, 1585
HindII	GTYRAC	4 cut(s)	115, 1236, 1360, 1585
HindIII	AAGCTT	2 cut(s)	54, 1257
HinfI	GANTC	7 cut(s)	419, 508, 728, 866, 908, 1229, 1521
HpaI	GTTAAC	2 cut(s)	115, 1236
HpaII	CCGG	4 cut(s)	23, 267, 1423, 1727
HphI	GGTGA	2 cut(s)	311, 1913
Hpy166II	GTNNAC	8 cut(s)	115, 834, 1076, 1236, 1345, 1360, 1585, 1798
Hpy188III	TCNNGA	5 cut(s)	23, 357, 912, 1727, 1760
Hpy8I	GTNNAC	8 cut(s)	115, 834, 1076, 1236, 1345, 1360, 1585, 1798
HpyAV	CCTTC	4 cut(s)	46, 602, 1259, 1680
HpyCH4III	ACNGT	2 cut(s)	924, 1240
HpyCH4IV	ACGT	2 cut(s)	225, 1078
HpyF3I	CTNAG	6 cut(s)	344, 847, 1325, 1673, 1826, 2013
HpySE526I	ACGT	2 cut(s)	225, 1078
HspAI	GCGC	3 cut(s)	962, 1095, 1862
Kpn2I	TCCGGA	2 cut(s)	22, 1726
Ksp22I	TGATCA	1 cut(s)	153
KspAI	GTTAAC	2 cut(s)	115, 1236
Kzo9I	GATC	8 cut(s)	153, 781, 843, 1084, 1296, 1426, 1666, 1996
LmnI	GCTCC	4 cut(s)	25, 359, 1440, 1729
Lsp1109I	GCAGC	1 cut(s)	965
LweI	GCATC	5 cut(s)	121, 242, 1344, 1753, 1828
MaeI	CTAG	3 cut(s)	927, 942, 968
MaeII	ACGT	2 cut(s)	225, 1078
MaeIII	GTNAC	3 cut(s)	334, 1054, 2031
MalI	GATC	8 cut(s)	155, 783, 845, 1086, 1298, 1428, 1668, 1998
MboI	GATC	8 cut(s)	153, 781, 843, 1084, 1296, 1426, 1666, 1996
MboII	GAAGA	8 cut(s)	117, 138, 491, 525, 1208, 1631, 1706, 1981
MfeI	CAATTG	1 cut(s)	1856
MflI	RGATCY	2 cut(s)	1296, 1426
MhlI	GDGCHC	5 cut(s)	883, 949, 1078, 1279, 1445
MlyI	GAGTC	1 cut(s)	428
MmeI	TCCRAC	3 cut(s)	256, 885, 1931
Mph1103I	ATGCAT	3 cut(s)	107, 816, 1337
MroI	TCCGGA	2 cut(s)	22, 1726
MseI	TTAA	4 cut(s)	114, 594, 675, 1235
MslI	CAYNNNNRTG	4 cut(s)	396, 819, 1002, 1869
MspI	CCGG	4 cut(s)	23, 267, 1423, 1727
MspR9I	CCNGG	2 cut(s)	1424, 1947
MunI	CAATTG	1 cut(s)	1856
Mva1269I	GAATGC	1 cut(s)	1144
MvaI	CCWGG	1 cut(s)	1947
MvnI	CGCG	2 cut(s)	262, 1095
NciI	CCSGG	1 cut(s)	1424
NdeI	CATATG	2 cut(s)	634, 1702
NdeII	GATC	8 cut(s)	153, 781, 843, 1084, 1296, 1426, 1666, 1996
NlaIV	GGNNCC	5 cut(s)	618, 988, 1298, 1731, 1913
NmuCI	GTSAC	1 cut(s)	2031
NsbI	TGCGCA	1 cut(s)	963
NsiI	ATGCAT	3 cut(s)	107, 816, 1337
NspI	RCATGY	1 cut(s)	1366
NspV	TTCGAA	1 cut(s)	1104
PciI	ACATGT	1 cut(s)	1362
PcsI	WCGNNNNNNNCGW	1 cut(s)	1084
PctI	GAATGC	1 cut(s)	1144
PfeI	GAWTC	6 cut(s)	508, 728, 866, 908, 1229, 1521
PkrI	GCNGC	4 cut(s)	309, 658, 955, 1379
PleI	GAGTC	1 cut(s)	427
PpsI	GAGTC	1 cut(s)	427
PscI	ACATGT	1 cut(s)	1362
Psp1406I	AACGTT	1 cut(s)	225
Psp6I	CCWGG	1 cut(s)	1945
PspGI	CCWGG	1 cut(s)	1945
PspN4I	GGNNCC	5 cut(s)	618, 988, 1298, 1731, 1913
PstI	CTGCAG	3 cut(s)	874, 1515, 1738
PstNI	CAGNNNCTG	1 cut(s)	1484
PsuI	RGATCY	2 cut(s)	1296, 1426
RsaI	GTAC	3 cut(s)	761, 1191, 1367
RsaNI	GTAC	3 cut(s)	760, 1190, 1366
RseI	CAYNNNNRTG	4 cut(s)	396, 819, 1002, 1869
SalI	GTCGAC	2 cut(s)	1358, 1583
SaqAI	TTAA	4 cut(s)	114, 594, 675, 1235
SatI	GCNGC	4 cut(s)	308, 657, 954, 1378
Sau3AI	GATC	8 cut(s)	153, 781, 843, 1084, 1296, 1426, 1666, 1996
SchI	GAGTC	1 cut(s)	428
ScrFI	CCNGG	2 cut(s)	1424, 1947
SduI	GDGCHC	5 cut(s)	883, 949, 1078, 1279, 1445
SfaNI	GCATC	5 cut(s)	121, 242, 1344, 1753, 1828
SfcI	CTRYAG	4 cut(s)	870, 1143, 1511, 1734
SfuI	TTCGAA	1 cut(s)	1104
SmiMI	CAYNNNNRTG	4 cut(s)	396, 819, 1002, 1869
SsiI	CCGC	7 cut(s)	215, 307, 614, 644, 657, 1377, 2077
SspI	AATATT	1 cut(s)	778
SspMI	CTAG	3 cut(s)	927, 942, 968
StyD4I	CCNGG	2 cut(s)	1422, 1945
StyI	CCWWGG	2 cut(s)	233, 1776
TaaI	ACNGT	2 cut(s)	924, 1240
TaiI	ACGT	2 cut(s)	228, 1081
TatI	WGTACW	2 cut(s)	759, 1365
TauI	GCSGC	3 cut(s)	310, 659, 1380
TfiI	GAWTC	6 cut(s)	508, 728, 866, 908, 1229, 1521
Tru1I	TTAA	4 cut(s)	114, 594, 675, 1235
Tru9I	TTAA	4 cut(s)	114, 594, 675, 1235
TscAI	CASTG	2 cut(s)	389, 1276
TseFI	GTSAC	1 cut(s)	2031
TseI	GCWGC	1 cut(s)	953
Tsp45I	GTSAC	1 cut(s)	2031
TspDTI	ATGAA	6 cut(s)	138, 452, 986, 1297, 1895, 1934
TspRI	CASTG	2 cut(s)	389, 1276
VneI	GTGCAC	1 cut(s)	1074
XapI	RAATTY	4 cut(s)	170, 439, 1815, 2043
XceI	RCATGY	1 cut(s)	1366
XmiI	GTMKAC	3 cut(s)	1344, 1359, 1584
XspI	CTAG	3 cut(s)	927, 942, 968
Zsp2I	ATGCAT	3 cut(s)	107, 816, 1337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.