RchiOBHm_Chr5g0002401

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0015053
Physical Location & Seq
Reverse (-)
1398730 .. 1401080
2351 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28378

Sequence Viewer

Length: 2241 bp
ATGAACAAGCTAAACAGCTCCTTCTTAAAACCCCAACCTCAGCCTACACCAACTGCCACCACCACCAGAGCTTTCAACGCTATCATCAACCGTCTCTCTTCTCAAGGCTCTCACCATGAAGTCCTTGCCACATACTCCTCTATGCTCAAAACCCACATAGCTCCGGATACCCACACCTTCCCTAATCTGCTCAAAGCTTGCACCTCCCTGAACCTCTTTTGTTATGGTGTCTCGTGTCATCAATGCATTGTTGTTAACGGGTTTTCTTCGGATGCTTACATTGCCTCTTCATTGATCAACTTCTATGCGAAATTTGGTTATGCCCAAAATGCACGCAAGGTGTTTGATACAATGGCGGAAAGAAACGTTGTTCCTTGGACTTCCATTATCGGATGCTATTCGCGTGCCGCAAGTGTTGGAGTCGCGTTTGAGATGTTTGGTGATATGCGGCGTGAGGGAGTTCAACCCAGTTCGGTTACTCTGCTCAGCTTGCTCTCTGGAGCTCTGGAACTTGCCCATGTGCAGTGTTTGCATGGTTGTGCTGTGTTGTATGGTTTTGAGTCTGATATGTCTTTGATGAATTCCATGTTGAATGTGTATTGTAAATGTGGGAGAGTTGAAGATGCTAGGGACTTGTTTGAGTATTTGAATCGAAGAGACATTGTTTCGTGGAACTCATTGATTTCAGGCTATGCACAGAGTGGAAATATCAGAGAAGTATTCCAGCTTTTATTTAAGATGAGGGTTGAAGGTGTGGAACCTGATAAGCAGACATACGCGACTGCGGTGTCTGTGGCCGCAACACAGAGTAATCTTAAATTGGGAAAGTCTGTGCATGGACAGATTTTGAGAACAGGATTTGAATTGGATTCCCACGTCGAAACAGCGCTTATTGTTATGTACTTGAAGTGCAGGAATATTGATCTTGCGTTTCGTGTATTTGAAAGGACAATTCAGAAGGATGTGGTTCTGTGGACGGCTATGATCTCAGGGCTTGCGCAAAATGATTCTGCAGACAGGGCTCTAATGGTTTTCTCTCAGATGTTGGAATCGAGAACAGAACCGTCTAGTTCTACCATAGCTAGTGCTCTTGCAGCTTGTGCGCAACTAGGTTCTATTGATTTAGGAACCTCAATTCACGGTTATGTGTTGAGGCAAGGAATGAGACTTGACATTCCTGCCCAAAACTCCCTTGTCACCATGTATGCAAAGTGTGCACGTTTGGATCATTGTCGCGCTGTTTTCGAAAATATGAGCAAAAGAGATTTGGTTTCTTGGAATGCAATAGTTGCTGGATATGCTCAAAATGGTCATATATGCGAGGCTCTGGTACTTTTCTCCGAGATGAGGGCAACTCTTCAGAAGCCTGATTCGTTAACTGTGGTCTCCCTTCTCCAAGCTTGTGCTTCCACTGGGGCTCTCCATCAAGGAAAGTGGATCCACAACTTCATTATTAGAAGTTGCCTCAGACCATGCATCTTGGTAGACACAGCTCTGGTCGACATGTACTCAAAATGCGGCGACATTGATAAAGCTCACAAGTGCTTTGTTGAGATGTCTGACCGGGATCTGGTGTCATGGAGCACTATTATTTCTGGTTATGGTTGTCATGGCAAAACAGAGACTGCTTTGGAGTTGTATGCAGAGCTTCTGCAGACTGGAATCAAACCAAATCATGTCATTTTCCTCTCAATTCTTTCAGCTTGTAGTCATAATGGTCTTGTCGACAAGGGTTTGAGCATATACCAGTCGATGACTGAAGATTTTGGTATTGCACCAAGCCTTGAACATCGAGCTTGCATTGTTGATCTCCTCAGTCGAGCTGGAAGGGTGGAAAAGGCATATGATTTCTACAAGAGGGTGTTTCCAGAGCCTGCAGTTGACGTCTTAGGCATACTTCTCGATGCCTGTCGAACCAAGGGCAATGAGTTTCTCGTGGACATTATCGCAGGAGAAATTTTGAGGCTGAGACCTGTGGATGCTGGAAACTATGTGCAATTGGCGCATACCTATGCTTCGATGAACAGATGGGATGGCGTTGGTGAAGCATGGAACCAAATGAAGTCTCTTGGCTTGAAAAAACTCCCTGGTTGGAGTTTTATCGAATTACATGGGACTATCACTACATTCTTCACAGATCACAATTCAAATCCTCAGATTGATGATATAGTGTCACTACTGAAAATTTTGAGCAAGGAAATGAGGAAATCAAGCCTCCGCAGTTGGGATGGCGTTGAATAA

Protein Analysis

746

Amino Acids

82.6

Weight (kDa)

7.05

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 23 - 67 3.2e-06 PPR repeat family
PPR_2 PF13041 121 - 167 5.3e-08 PPR repeat family
PPR_2 PF13041 219 - 261 6.8e-11 PPR repeat family
PPR PF01535 222 - 252 6.3e-08 PPR repeat
PPR_2 PF13041 320 - 368 7.4e-07 PPR repeat family
PPR_2 PF13041 422 - 469 3.6e-09 PPR repeat family
PPR_2 PF13041 523 - 560 2.6e-06 PPR repeat family
E_motif PF20431 653 - 702 2.8e-07 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015053)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G04370
fragaria_vesca FvH4_3g01610
malus_domestica MD10G1325500.v1.1
prunus_persica Prupe.4G016600_v2.0.a1
pyrus_communis pycom10g27520
rosa_chinensis RchiOBHm_Chr5g0002401
rosa_laevigata RLG00000031029
rosa_multiflora Rmu_co8285719.1_g000001 Rmu_sc0001717.1_g000003
rosa_roxburghii Rroxscaffold_1G00073450
rosa_rugosa Rorug04G0396000
rosa_samantha Rh5AG018800 Rh5BG021600 Rh5CG020700 Rh5DG019800
rosa_wichuraiana Rw5G001760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 787
AatII GACGTC 1 cut(s) 1887
Acc16I TGCGCA 2 cut(s) 999, 1104
AccI GTMKAC 3 cut(s) 1485, 1500, 1725
AccII CGCG 4 cut(s) 403, 425, 779, 1236
AccIII TCCGGA 1 cut(s) 163
AciI CCGC 7 cut(s) 356, 408, 448, 785, 798, 1518, 2218
AclI AACGTT 1 cut(s) 366
AclWI GGATC 4 cut(s) 1233, 1432, 1445, 1575
AcoI YGGCCR 1 cut(s) 795
AcsI RAATTY 4 cut(s) 311, 580, 1956, 2184
AcuI CTGAAG 2 cut(s) 1343, 1779
AcyI GRCGYC 1 cut(s) 1884
AdeI CACNNNGTG 1 cut(s) 701
AfaI GTAC 3 cut(s) 902, 1332, 1508
AfeI AGCGCT 1 cut(s) 888
AfiI CCNNNNNNNGG 3 cut(s) 1347, 1570, 2224
AflIII ACRYGT 1 cut(s) 1503
AjiI CACGTC 1 cut(s) 877
AjnI CCWGG 1 cut(s) 2086
Alw21I GWGCWC 4 cut(s) 505, 1090, 1219, 1586
Alw26I GTCTC 8 cut(s) 98, 235, 651, 1159, 1390, 1616, 1963, 2070
Alw44I GTGCAC 1 cut(s) 1215
AlwI GGATC 4 cut(s) 1233, 1432, 1445, 1575
AlwNI CAGNNNCTG 2 cut(s) 1625, 1874
Aor13HI TCCGGA 1 cut(s) 163
Aor51HI AGCGCT 1 cut(s) 888
AoxI GGCC 1 cut(s) 795
ApaLI GTGCAC 1 cut(s) 1215
ApeKI GCWGC 1 cut(s) 1094
ApoI RAATTY 4 cut(s) 311, 580, 1956, 2184
AspLEI GCGC 5 cut(s) 889, 1000, 1105, 1238, 2005
AsuC2I CCSGG 1 cut(s) 1565
AsuHPI GGTGA 4 cut(s) 104, 452, 1189, 2054
AsuII TTCGAA 1 cut(s) 1245
BaeGI GKGCMC 1 cut(s) 1219
BamHI GGATCC 1 cut(s) 1437
BanII GRGCYC 3 cut(s) 505, 1024, 1420
BauI CACGAG 2 cut(s) 232, 1934
Bbv12I GWGCWC 4 cut(s) 505, 1090, 1219, 1586
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 1 cut(s) 1106
BccI CCATC 4 cut(s) 1431, 2022, 2027, 2222
BceAI ACGGC 1 cut(s) 993
BcgI CGANNNNNNTGC 2 cut(s) 1882, 1916
BciT130I CCWGG 1 cut(s) 2088
BciVI GTATCC 1 cut(s) 160
BclI TGATCA 1 cut(s) 294
BcnI CCSGG 1 cut(s) 1565
BcoDI GTCTC 8 cut(s) 98, 235, 651, 1159, 1390, 1616, 1963, 2070
BfaI CTAG 4 cut(s) 627, 1068, 1083, 1109
BfmI CTRYAG 3 cut(s) 1011, 1652, 1875
BfoI RGCGCY 1 cut(s) 890
BfuI GTATCC 1 cut(s) 160
BisI GCNGC 5 cut(s) 408, 449, 798, 1095, 1519
BlpI GCTNAGC 1 cut(s) 485
BlsI GCNGC 5 cut(s) 409, 450, 799, 1096, 1520
Bme1390I CCNGG 2 cut(s) 1565, 2088
BmgBI CACGTC 1 cut(s) 877
BmiI GGNNCC 4 cut(s) 759, 1129, 1439, 2054
BmrFI CCNGG 2 cut(s) 1565, 2088
BmrI ACTGGG 2 cut(s) 462, 1422
BmsI GCATC 6 cut(s) 262, 383, 613, 1485, 1894, 1969
BmuI ACTGGG 2 cut(s) 462, 1422
BplI GAGNNNNNCTC 2 cut(s) 1339, 1371
BpmI CTGGAG 1 cut(s) 519
Bpu10I CCTNAGC 1 cut(s) 39
Bpu1102I GCTNAGC 1 cut(s) 485
Bpu14I TTCGAA 1 cut(s) 1245
BpuEI CTTGAG 1 cut(s) 87
BpuMI CCSGG 1 cut(s) 1565
BsaHI GRCGYC 1 cut(s) 1884
BsaI GGTCTC 2 cut(s) 1390, 1963
BsaJI CCNNGG 3 cut(s) 374, 1917, 2086
BsaWI WCCGGW 1 cut(s) 163
Bsc4I CCNNNNNNNGG 3 cut(s) 1347, 1570, 2224
Bse1I ACTGG 4 cut(s) 468, 1417, 1663, 1747
Bse3DI GCAATG 2 cut(s) 279, 1930
BseAI TCCGGA 1 cut(s) 163
BseBI CCWGG 1 cut(s) 2088
BseDI CCNNGG 3 cut(s) 374, 1917, 2086
BseGI GGATG 6 cut(s) 277, 398, 967, 1984, 2038, 2233
BseLI CCNNNNNNNGG 3 cut(s) 1347, 1570, 2224
BseMI GCAATG 2 cut(s) 279, 1930
BseMII CTCAG 8 cut(s) 53, 499, 1002, 1052, 1480, 1828, 1958, 2168
BseNI ACTGG 4 cut(s) 468, 1417, 1663, 1747
BseRI GAGGAG 2 cut(s) 127, 1802
BseSI GKGCMC 1 cut(s) 1219
BseXI GCAGC 1 cut(s) 1106
BsgI GTGCAG 2 cut(s) 542, 931
Bsh1236I CGCG 4 cut(s) 403, 425, 779, 1236
BshFI GGCC 1 cut(s) 797
BsiHKAI GWGCWC 4 cut(s) 505, 1090, 1219, 1586
BsiSI CCGG 2 cut(s) 164, 1564
BslFI GGGAC 2 cut(s) 644, 2128
BslI CCNNNNNNNGG 3 cut(s) 1347, 1570, 2224
BsmAI GTCTC 8 cut(s) 98, 235, 651, 1159, 1390, 1616, 1963, 2070
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 2 cut(s) 644, 2128
BsmI GAATGC 1 cut(s) 1285
BsnI GGCC 1 cut(s) 797
Bso31I GGTCTC 2 cut(s) 1390, 1963
Bsp119I TTCGAA 1 cut(s) 1245
Bsp1286I GDGCHC 6 cut(s) 505, 1024, 1090, 1219, 1420, 1586
Bsp13I TCCGGA 1 cut(s) 163
Bsp143I GATC 8 cut(s) 294, 922, 984, 1225, 1437, 1567, 1807, 2137
Bsp1720I GCTNAGC 1 cut(s) 485
BspACI CCGC 7 cut(s) 356, 408, 448, 785, 798, 1518, 2218
BspANI GGCC 1 cut(s) 797
BspCNI CTCAG 8 cut(s) 52, 498, 1001, 1051, 1479, 1827, 1959, 2167
BspEI TCCGGA 1 cut(s) 163
BspFNI CGCG 4 cut(s) 403, 425, 779, 1236
BspLI GGNNCC 4 cut(s) 759, 1129, 1439, 2054
BspMAI CTGCAG 3 cut(s) 1015, 1656, 1879
BspPI GGATC 4 cut(s) 1233, 1432, 1445, 1575
BspT104I TTCGAA 1 cut(s) 1245
BspTNI GGTCTC 2 cut(s) 1390, 1963
BsrDI GCAATG 2 cut(s) 279, 1930
BsrI ACTGG 4 cut(s) 468, 1417, 1663, 1747
BssECI CCNNGG 3 cut(s) 374, 1917, 2086
BssMI GATC 8 cut(s) 294, 922, 984, 1225, 1437, 1567, 1807, 2137
BssNI GRCGYC 1 cut(s) 1884
BssSI CACGAG 2 cut(s) 232, 1934
BssT1I CCWWGG 2 cut(s) 374, 1917
Bst2BI CACGAG 2 cut(s) 232, 1934
Bst2UI CCWGG 1 cut(s) 2088
Bst4CI ACNGT 4 cut(s) 92, 1065, 1142, 1381
Bst6I CTCTTC 4 cut(s) 103, 292, 649, 1362
BstACI GRCGYC 1 cut(s) 1884
BstAPI GCANNNNNTGC 4 cut(s) 529, 1100, 1214, 1289
BstBI TTCGAA 1 cut(s) 1245
BstC8I GCNNGC 7 cut(s) 199, 334, 405, 491, 996, 1798, 1875
BstDEI CTNAG 9 cut(s) 39, 485, 988, 1038, 1466, 1814, 1888, 1967, 2154
BstF5I GGATG 6 cut(s) 277, 398, 967, 1984, 2038, 2233
BstFNI CGCG 4 cut(s) 403, 425, 779, 1236
BstH2I RGCGCY 1 cut(s) 890
BstHHI GCGC 5 cut(s) 889, 1000, 1105, 1238, 2005
BstKTI GATC 8 cut(s) 297, 925, 987, 1228, 1440, 1570, 1810, 2140
BstMAI GTCTC 8 cut(s) 98, 235, 651, 1159, 1390, 1616, 1963, 2070
BstMBI GATC 8 cut(s) 294, 922, 984, 1225, 1437, 1567, 1807, 2137
BstNI CCWGG 1 cut(s) 2088
BstNSI RCATGY 1 cut(s) 1507
BstSCI CCNGG 2 cut(s) 1563, 2086
BstSFI CTRYAG 3 cut(s) 1011, 1652, 1875
BstSLI GKGCMC 1 cut(s) 1219
BstUI CGCG 4 cut(s) 403, 425, 779, 1236
BstV1I GCAGC 1 cut(s) 1106
BstX2I RGATCY 2 cut(s) 1437, 1567
BstYI RGATCY 2 cut(s) 1437, 1567
BsuI GTATCC 1 cut(s) 160
BsuRI GGCC 1 cut(s) 797
BtrI CACGTC 1 cut(s) 877
BtsCI GGATG 6 cut(s) 277, 398, 967, 1984, 2038, 2233
BtsI GCAGTG 1 cut(s) 530
BtsIMutI CAGTG 2 cut(s) 530, 1410
Cac8I GCNNGC 7 cut(s) 199, 334, 405, 491, 996, 1798, 1875
CaiI CAGNNNCTG 2 cut(s) 1625, 1874
CfoI GCGC 5 cut(s) 889, 1000, 1105, 1238, 2005
Csp6I GTAC 3 cut(s) 901, 1331, 1507
CspCI CAANNNNNGTGG 2 cut(s) 1415, 1450
CviQI GTAC 3 cut(s) 901, 1331, 1507
DdeI CTNAG 9 cut(s) 39, 485, 988, 1038, 1466, 1814, 1888, 1967, 2154
DpnI GATC 8 cut(s) 296, 924, 986, 1227, 1439, 1569, 1809, 2139
DpnII GATC 8 cut(s) 294, 922, 984, 1225, 1437, 1567, 1807, 2137
DraIII CACNNNGTG 1 cut(s) 701
DrdI GACNNNNNNGTC 1 cut(s) 787
DseDI GACNNNNNNGTC 1 cut(s) 787
EaeI YGGCCR 1 cut(s) 795
Eam1104I CTCTTC 4 cut(s) 103, 292, 649, 1362
EarI CTCTTC 4 cut(s) 103, 292, 649, 1362
EciI GGCGGA 1 cut(s) 371
Ecl136II GAGCTC 1 cut(s) 503
Eco130I CCWWGG 2 cut(s) 374, 1917
Eco24I GRGCYC 3 cut(s) 505, 1024, 1420
Eco31I GGTCTC 2 cut(s) 1390, 1963
Eco47III AGCGCT 1 cut(s) 888
Eco53kI GAGCTC 1 cut(s) 503
Eco57I CTGAAG 2 cut(s) 1343, 1779
EcoICRI GAGCTC 1 cut(s) 503
EcoRI GAATTC 1 cut(s) 580
EcoRII CCWGG 1 cut(s) 2086
EcoT14I CCWWGG 2 cut(s) 374, 1917
EcoT22I ATGCAT 2 cut(s) 248, 1478
EcoT38I GRGCYC 3 cut(s) 505, 1024, 1420
ErhI CCWWGG 2 cut(s) 374, 1917
Esp3I CGTCTC 1 cut(s) 98
FaqI GGGAC 2 cut(s) 644, 2128
FauNDI CATATG 1 cut(s) 1843
FbaI TGATCA 1 cut(s) 294
FblI GTMKAC 3 cut(s) 1485, 1500, 1725
Fnu4HI GCNGC 5 cut(s) 408, 449, 798, 1095, 1519
FokI GGATG 5 cut(s) 284, 405, 974, 1991, 2045
FriOI GRGCYC 3 cut(s) 505, 1024, 1420
Fsp4HI GCNGC 5 cut(s) 408, 449, 798, 1095, 1519
FspBI CTAG 4 cut(s) 627, 1068, 1083, 1109
FspI TGCGCA 2 cut(s) 999, 1104
GlaI GCGC 5 cut(s) 888, 999, 1104, 1237, 2004
GluI GCNGC 5 cut(s) 408, 449, 798, 1095, 1519
GsuI CTGGAG 1 cut(s) 519
HaeII RGCGCY 1 cut(s) 890
HaeIII GGCC 1 cut(s) 797
HapII CCGG 2 cut(s) 164, 1564
HhaI GCGC 5 cut(s) 889, 1000, 1105, 1238, 2005
Hin1I GRCGYC 1 cut(s) 1884
Hin6I GCGC 5 cut(s) 887, 998, 1103, 1236, 2003
HinP1I GCGC 5 cut(s) 887, 998, 1103, 1236, 2003
HincII GTYRAC 5 cut(s) 256, 1377, 1501, 1726, 1882
HindII GTYRAC 5 cut(s) 256, 1377, 1501, 1726, 1882
HindIII AAGCTT 2 cut(s) 195, 1398
HinfI GANTC 8 cut(s) 420, 560, 649, 869, 1007, 1049, 1370, 1662
HpaI GTTAAC 2 cut(s) 256, 1377
HpaII CCGG 2 cut(s) 164, 1564
HphI GGTGA 4 cut(s) 104, 452, 1189, 2054
Hpy166II GTNNAC 9 cut(s) 256, 975, 1217, 1377, 1486, 1501, 1726, 1882, 1939
Hpy188III TCNNGA 6 cut(s) 164, 498, 506, 1053, 1868, 1901
Hpy8I GTNNAC 9 cut(s) 256, 975, 1217, 1377, 1486, 1501, 1726, 1882, 1939
Hpy99I CGWCG 1 cut(s) 881
HpyAV CCTTC 6 cut(s) 31, 187, 743, 952, 1400, 1821
HpyCH4III ACNGT 4 cut(s) 92, 1065, 1142, 1381
HpyCH4IV ACGT 4 cut(s) 366, 876, 1219, 1884
HpyF3I CTNAG 9 cut(s) 39, 485, 988, 1038, 1466, 1814, 1888, 1967, 2154
HpySE526I ACGT 4 cut(s) 366, 876, 1219, 1884
Hsp92I GRCGYC 1 cut(s) 1884
HspAI GCGC 5 cut(s) 887, 998, 1103, 1236, 2003
Kpn2I TCCGGA 1 cut(s) 163
Ksp22I TGATCA 1 cut(s) 294
KspAI GTTAAC 2 cut(s) 256, 1377
Kzo9I GATC 8 cut(s) 294, 922, 984, 1225, 1437, 1567, 1807, 2137
LmnI GCTCC 4 cut(s) 23, 166, 500, 1581
Lsp1109I GCAGC 1 cut(s) 1106
LweI GCATC 6 cut(s) 262, 383, 613, 1485, 1894, 1969
MaeI CTAG 4 cut(s) 627, 1068, 1083, 1109
MaeII ACGT 4 cut(s) 366, 876, 1219, 1884
MaeIII GTNAC 3 cut(s) 475, 1195, 2172
MalI GATC 8 cut(s) 296, 924, 986, 1227, 1439, 1569, 1809, 2139
MboI GATC 8 cut(s) 294, 922, 984, 1225, 1437, 1567, 1807, 2137
MboII GAAGA 8 cut(s) 90, 258, 279, 632, 666, 1349, 1772, 2122
MfeI CAATTG 1 cut(s) 1997
MflI RGATCY 2 cut(s) 1437, 1567
MhlI GDGCHC 6 cut(s) 505, 1024, 1090, 1219, 1420, 1586
MlyI GAGTC 2 cut(s) 429, 569
MmeI TCCRAC 3 cut(s) 397, 1026, 2072
Mph1103I ATGCAT 2 cut(s) 248, 1478
MroI TCCGGA 1 cut(s) 163
MseI TTAA 5 cut(s) 26, 255, 735, 816, 1376
MslI CAYNNNNRTG 3 cut(s) 537, 1143, 2010
MspI CCGG 2 cut(s) 164, 1564
MspR9I CCNGG 2 cut(s) 1565, 2088
MunI CAATTG 1 cut(s) 1997
Mva1269I GAATGC 1 cut(s) 1285
MvaI CCWGG 1 cut(s) 2088
MvnI CGCG 4 cut(s) 403, 425, 779, 1236
NciI CCSGG 1 cut(s) 1565
NdeI CATATG 1 cut(s) 1843
NdeII GATC 8 cut(s) 294, 922, 984, 1225, 1437, 1567, 1807, 2137
NlaIV GGNNCC 4 cut(s) 759, 1129, 1439, 2054
NmuCI GTSAC 2 cut(s) 1195, 2172
NsbI TGCGCA 2 cut(s) 999, 1104
NsiI ATGCAT 2 cut(s) 248, 1478
NspI RCATGY 1 cut(s) 1507
NspV TTCGAA 1 cut(s) 1245
PciI ACATGT 1 cut(s) 1503
PctI GAATGC 1 cut(s) 1285
PfeI GAWTC 6 cut(s) 649, 869, 1007, 1049, 1370, 1662
PkrI GCNGC 5 cut(s) 409, 450, 799, 1096, 1520
PleI GAGTC 2 cut(s) 428, 568
PpsI GAGTC 2 cut(s) 428, 568
PscI ACATGT 1 cut(s) 1503
Psp124BI GAGCTC 1 cut(s) 505
Psp1406I AACGTT 1 cut(s) 366
Psp6I CCWGG 1 cut(s) 2086
PspGI CCWGG 1 cut(s) 2086
PspN4I GGNNCC 4 cut(s) 759, 1129, 1439, 2054
PstI CTGCAG 3 cut(s) 1015, 1656, 1879
PstNI CAGNNNCTG 2 cut(s) 1625, 1874
PsuI RGATCY 2 cut(s) 1437, 1567
RsaI GTAC 3 cut(s) 902, 1332, 1508
RsaNI GTAC 3 cut(s) 901, 1331, 1507
RseI CAYNNNNRTG 3 cut(s) 537, 1143, 2010
SacI GAGCTC 1 cut(s) 505
SalI GTCGAC 2 cut(s) 1499, 1724
SaqAI TTAA 5 cut(s) 26, 255, 735, 816, 1376
SatI GCNGC 5 cut(s) 408, 449, 798, 1095, 1519
Sau3AI GATC 8 cut(s) 294, 922, 984, 1225, 1437, 1567, 1807, 2137
SchI GAGTC 2 cut(s) 429, 569
ScrFI CCNGG 2 cut(s) 1565, 2088
SduI GDGCHC 6 cut(s) 505, 1024, 1090, 1219, 1420, 1586
SfaNI GCATC 6 cut(s) 262, 383, 613, 1485, 1894, 1969
SfcI CTRYAG 3 cut(s) 1011, 1652, 1875
SfuI TTCGAA 1 cut(s) 1245
SmiMI CAYNNNNRTG 3 cut(s) 537, 1143, 2010
SmlI CTYRAG 1 cut(s) 102
SmoI CTYRAG 1 cut(s) 102
SsiI CCGC 7 cut(s) 356, 408, 448, 785, 798, 1518, 2218
SspI AATATT 1 cut(s) 919
SspMI CTAG 4 cut(s) 627, 1068, 1083, 1109
SstI GAGCTC 1 cut(s) 505
StyD4I CCNGG 2 cut(s) 1563, 2086
StyI CCWWGG 2 cut(s) 374, 1917
TaaI ACNGT 4 cut(s) 92, 1065, 1142, 1381
TaiI ACGT 4 cut(s) 369, 879, 1222, 1887
TatI WGTACW 2 cut(s) 900, 1506
TauI GCSGC 4 cut(s) 410, 451, 800, 1521
TfiI GAWTC 6 cut(s) 649, 869, 1007, 1049, 1370, 1662
Tru1I TTAA 5 cut(s) 26, 255, 735, 816, 1376
Tru9I TTAA 5 cut(s) 26, 255, 735, 816, 1376
TscAI CASTG 2 cut(s) 530, 1417
TseFI GTSAC 2 cut(s) 1195, 2172
TseI GCWGC 1 cut(s) 1094
Tsp45I GTSAC 2 cut(s) 1195, 2172
TspDTI ATGAA 7 cut(s) 17, 132, 279, 593, 1438, 2036, 2075
TspRI CASTG 2 cut(s) 530, 1417
VneI GTGCAC 1 cut(s) 1215
XapI RAATTY 4 cut(s) 311, 580, 1956, 2184
XceI RCATGY 1 cut(s) 1507
XmiI GTMKAC 3 cut(s) 1485, 1500, 1725
XspI CTAG 4 cut(s) 627, 1068, 1083, 1109
ZraI GACGTC 1 cut(s) 1885
Zsp2I ATGCAT 2 cut(s) 248, 1478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.