Domain of unknown function (DUF4408)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61260 |
| fragaria_vesca | FvH4_3g04160 |
| malus_domestica | MD05G1324300.v1.1 MD10G1302100.v1.1 |
| prunus_persica | Prupe.4G035700_v2.0.a1 |
| pyrus_communis | pycom05g29850 pycom10g25460 |
| rosa_chinensis | RchiOBHm_Chr5g0006611 |
| rosa_laevigata | RLG00000031406 |
| rosa_multiflora | Rmu_co8099104.1_g000001 Rmu_sc0001972.1_g000005 Rmu_sc0011154.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00069400 |
| rosa_rugosa | Rorug04G0423100 |
| rosa_samantha | Rh5AG050500 Rh5BG049600 Rh5CG058100 Rh5DG049000 |
| rosa_wichuraiana | Rw5G005030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 833 |
| AccB1I | GGYRCC | 3 cut(s) | 343, 385, 667 |
| AccI | GTMKAC | 1 cut(s) | 279 |
| AciI | CCGC | 6 cut(s) | 152, 311, 383, 578, 731, 923 |
| AclWI | GGATC | 3 cut(s) | 488, 621, 774 |
| AcoI | YGGCCR | 2 cut(s) | 63, 775 |
| AcsI | RAATTY | 2 cut(s) | 554, 907 |
| AcuI | CTGAAG | 1 cut(s) | 657 |
| AcvI | CACGTG | 1 cut(s) | 762 |
| AcyI | GRCGYC | 4 cut(s) | 344, 386, 668, 830 |
| AfaI | GTAC | 4 cut(s) | 320, 359, 401, 447 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 147, 229, 412, 619, 641, 883, 979 |
| AflIII | ACRYGT | 1 cut(s) | 759 |
| AgeI | ACCGGT | 2 cut(s) | 349, 391 |
| AgsI | TTSAA | 6 cut(s) | 454, 600, 862, 970, 1003, 1039 |
| AjiI | CACGTC | 1 cut(s) | 340 |
| AleI | CACNNNNGTG | 1 cut(s) | 777 |
| AluBI | AGCT | 5 cut(s) | 73, 197, 238, 902, 934 |
| AluI | AGCT | 5 cut(s) | 73, 197, 238, 902, 934 |
| Alw21I | GWGCWC | 1 cut(s) | 846 |
| Alw26I | GTCTC | 3 cut(s) | 109, 520, 821 |
| Alw44I | GTGCAC | 1 cut(s) | 842 |
| AlwI | GGATC | 3 cut(s) | 488, 621, 774 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 254, 473 |
| Ama87I | CYCGRG | 1 cut(s) | 517 |
| AoxI | GGCC | 6 cut(s) | 63, 149, 224, 647, 718, 775 |
| ApaLI | GTGCAC | 1 cut(s) | 842 |
| ApeKI | GCWGC | 2 cut(s) | 197, 899 |
| ApoI | RAATTY | 2 cut(s) | 554, 907 |
| AsiGI | ACCGGT | 2 cut(s) | 349, 391 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1043 |
| AspLEI | GCGC | 4 cut(s) | 346, 366, 388, 670 |
| AspS9I | GGNCC | 2 cut(s) | 126, 718 |
| AsuHPI | GGTGA | 4 cut(s) | 181, 445, 602, 901 |
| AvaI | CYCGRG | 1 cut(s) | 517 |
| AvaII | GGWCC | 1 cut(s) | 126 |
| AxyI | CCTNAGG | 2 cut(s) | 228, 498 |
| BaeGI | GKGCMC | 1 cut(s) | 846 |
| BalI | TGGCCA | 1 cut(s) | 65 |
| BanI | GGYRCC | 3 cut(s) | 343, 385, 667 |
| BbrPI | CACGTG | 1 cut(s) | 762 |
| BbsI | GAAGAC | 2 cut(s) | 710, 1014 |
| Bbv12I | GWGCWC | 1 cut(s) | 846 |
| BbvCI | CCTCAGC | 2 cut(s) | 480, 935 |
| BbvI | GCAGC | 2 cut(s) | 184, 911 |
| BccI | CCATC | 1 cut(s) | 188 |
| BceAI | ACGGC | 8 cut(s) | 86, 139, 634, 692, 705, 762, 790, 931 |
| BclI | TGATCA | 1 cut(s) | 487 |
| BcoDI | GTCTC | 3 cut(s) | 109, 520, 821 |
| BfaI | CTAG | 1 cut(s) | 624 |
| BfmI | CTRYAG | 1 cut(s) | 465 |
| BfoI | RGCGCY | 3 cut(s) | 347, 389, 671 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 676 |
| BisI | GCNGC | 5 cut(s) | 152, 198, 384, 900, 924 |
| BlpI | GCTNAGC | 1 cut(s) | 734 |
| BlsI | GCNGC | 5 cut(s) | 153, 199, 385, 901, 925 |
| Bme18I | GGWCC | 1 cut(s) | 126 |
| BmeT110I | CYCGRG | 1 cut(s) | 517 |
| BmgBI | CACGTC | 1 cut(s) | 340 |
| BmgT120I | GGNCC | 2 cut(s) | 126, 718 |
| BmiI | GGNNCC | 5 cut(s) | 306, 345, 387, 523, 669 |
| BpiI | GAAGAC | 2 cut(s) | 710, 1014 |
| BpmI | CTGGAG | 1 cut(s) | 710 |
| Bpu10I | CCTNAGC | 3 cut(s) | 146, 480, 935 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 734 |
| BsaAI | YACGTR | 2 cut(s) | 699, 762 |
| BsaBI | GATNNNNATC | 1 cut(s) | 492 |
| BsaHI | GRCGYC | 4 cut(s) | 344, 386, 668, 830 |
| BsaI | GGTCTC | 1 cut(s) | 520 |
| BsaJI | CCNNGG | 4 cut(s) | 663, 778, 894, 1063 |
| BsaWI | WCCGGW | 4 cut(s) | 271, 349, 391, 612 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 253, 283, 683, 713, 783, 801, 813, 831 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 147, 229, 412, 619, 641, 883, 979 |
| Bse118I | RCCGGY | 6 cut(s) | 41, 222, 349, 391, 738, 919 |
| Bse1I | ACTGG | 2 cut(s) | 624, 693 |
| Bse21I | CCTNAGG | 2 cut(s) | 228, 498 |
| Bse8I | GATNNNNATC | 1 cut(s) | 492 |
| BseDI | CCNNGG | 4 cut(s) | 663, 778, 894, 1063 |
| BseGI | GGATG | 3 cut(s) | 382, 508, 537 |
| BseJI | GATNNNNATC | 1 cut(s) | 492 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 147, 229, 412, 619, 641, 883, 979 |
| BseMII | CTCAG | 7 cut(s) | 160, 242, 471, 489, 725, 926, 944 |
| BseNI | ACTGG | 2 cut(s) | 624, 693 |
| BseRI | GAGGAG | 8 cut(s) | 193, 428, 798, 801, 804, 807, 810, 839 |
| BseSI | GKGCMC | 1 cut(s) | 846 |
| BseX3I | CGGCCG | 1 cut(s) | 775 |
| BseXI | GCAGC | 2 cut(s) | 184, 911 |
| Bsh1285I | CGRYCG | 3 cut(s) | 42, 223, 778 |
| BshFI | GGCC | 6 cut(s) | 65, 151, 226, 649, 720, 777 |
| BshNI | GGYRCC | 3 cut(s) | 343, 385, 667 |
| BshTI | ACCGGT | 2 cut(s) | 349, 391 |
| BsiEI | CGRYCG | 3 cut(s) | 42, 223, 778 |
| BsiHKAI | GWGCWC | 1 cut(s) | 846 |
| BsiHKCI | CYCGRG | 1 cut(s) | 517 |
| BsiSI | CCGG | 8 cut(s) | 42, 223, 272, 350, 392, 613, 739, 920 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 147, 229, 412, 619, 641, 883, 979 |
| BsmAI | GTCTC | 3 cut(s) | 109, 520, 821 |
| BsmBI | CGTCTC | 2 cut(s) | 109, 821 |
| BsnI | GGCC | 6 cut(s) | 65, 151, 226, 649, 720, 777 |
| Bso31I | GGTCTC | 1 cut(s) | 520 |
| BsoBI | CYCGRG | 1 cut(s) | 517 |
| Bsp1286I | GDGCHC | 1 cut(s) | 846 |
| Bsp1407I | TGTACA | 1 cut(s) | 318 |
| Bsp143I | GATC | 6 cut(s) | 120, 487, 493, 507, 626, 766 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 734 |
| Bsp19I | CCATGG | 1 cut(s) | 894 |
| BspACI | CCGC | 6 cut(s) | 152, 311, 383, 578, 731, 923 |
| BspANI | GGCC | 6 cut(s) | 65, 151, 226, 649, 720, 777 |
| BspCNI | CTCAG | 7 cut(s) | 159, 241, 472, 490, 726, 927, 945 |
| BspHI | TCATGA | 1 cut(s) | 490 |
| BspLI | GGNNCC | 5 cut(s) | 306, 345, 387, 523, 669 |
| BspMAI | CTGCAG | 1 cut(s) | 469 |
| BspPI | GGATC | 3 cut(s) | 488, 621, 774 |
| BspT107I | GGYRCC | 3 cut(s) | 343, 385, 667 |
| BspTNI | GGTCTC | 1 cut(s) | 520 |
| BsrFI | RCCGGY | 6 cut(s) | 41, 222, 349, 391, 738, 919 |
| BsrGI | TGTACA | 1 cut(s) | 318 |
| BsrI | ACTGG | 2 cut(s) | 624, 693 |
| BssAI | RCCGGY | 6 cut(s) | 41, 222, 349, 391, 738, 919 |
| BssECI | CCNNGG | 4 cut(s) | 663, 778, 894, 1063 |
| BssMI | GATC | 6 cut(s) | 120, 487, 493, 507, 626, 766 |
| BssNAI | GTATAC | 1 cut(s) | 280 |
| BssNI | GRCGYC | 4 cut(s) | 344, 386, 668, 830 |
| BssT1I | CCWWGG | 2 cut(s) | 663, 894 |
| Bst1107I | GTATAC | 1 cut(s) | 280 |
| Bst4CI | ACNGT | 2 cut(s) | 806, 1064 |
| Bst6I | CTCTTC | 2 cut(s) | 601, 746 |
| BstACI | GRCGYC | 4 cut(s) | 344, 386, 668, 830 |
| BstAUI | TGTACA | 1 cut(s) | 318 |
| BstBAI | YACGTR | 2 cut(s) | 699, 762 |
| BstC8I | GCNNGC | 4 cut(s) | 309, 576, 740, 921 |
| BstDEI | CTNAG | 8 cut(s) | 146, 228, 480, 498, 540, 734, 935, 953 |
| BstDSI | CCRYGG | 3 cut(s) | 778, 894, 1063 |
| BstEII | GGTNACC | 1 cut(s) | 889 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 145 |
| BstF5I | GGATG | 3 cut(s) | 382, 508, 537 |
| BstH2I | RGCGCY | 3 cut(s) | 347, 389, 671 |
| BstHHI | GCGC | 4 cut(s) | 346, 366, 388, 670 |
| BstKTI | GATC | 6 cut(s) | 123, 490, 496, 510, 629, 769 |
| BstMAI | GTCTC | 3 cut(s) | 109, 520, 821 |
| BstMBI | GATC | 6 cut(s) | 120, 487, 493, 507, 626, 766 |
| BstMCI | CGRYCG | 3 cut(s) | 42, 223, 778 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 151, 676, 739 |
| BstPI | GGTNACC | 1 cut(s) | 889 |
| BstSFI | CTRYAG | 1 cut(s) | 465 |
| BstSLI | GKGCMC | 1 cut(s) | 846 |
| BstV1I | GCAGC | 2 cut(s) | 184, 911 |
| BstV2I | GAAGAC | 2 cut(s) | 710, 1014 |
| BstX2I | RGATCY | 1 cut(s) | 626 |
| BstYI | RGATCY | 1 cut(s) | 626 |
| BstZ17I | GTATAC | 1 cut(s) | 280 |
| BstZI | CGGCCG | 1 cut(s) | 775 |
| Bsu36I | CCTNAGG | 2 cut(s) | 228, 498 |
| BsuRI | GGCC | 6 cut(s) | 65, 151, 226, 649, 720, 777 |
| BtgI | CCRYGG | 3 cut(s) | 778, 894, 1063 |
| BtrI | CACGTC | 1 cut(s) | 340 |
| BtsCI | GGATG | 3 cut(s) | 382, 508, 537 |
| BtsI | GCAGTG | 1 cut(s) | 846 |
| BtsIMutI | CAGTG | 2 cut(s) | 686, 846 |
| Cac8I | GCNNGC | 4 cut(s) | 309, 576, 740, 921 |
| CaiI | CAGNNNCTG | 2 cut(s) | 254, 473 |
| CciI | TCATGA | 1 cut(s) | 490 |
| CfoI | GCGC | 4 cut(s) | 346, 366, 388, 670 |
| Cfr10I | RCCGGY | 6 cut(s) | 41, 222, 349, 391, 738, 919 |
| Cfr13I | GGNCC | 2 cut(s) | 126, 718 |
| Csp6I | GTAC | 4 cut(s) | 319, 358, 400, 446 |
| CspAI | ACCGGT | 2 cut(s) | 349, 391 |
| CviAII | CATG | 7 cut(s) | 67, 132, 491, 745, 895, 1012, 1048 |
| CviQI | GTAC | 4 cut(s) | 319, 358, 400, 446 |
| DdeI | CTNAG | 8 cut(s) | 146, 228, 480, 498, 540, 734, 935, 953 |
| DinI | GGCGCC | 3 cut(s) | 345, 387, 669 |
| DpnI | GATC | 6 cut(s) | 122, 489, 495, 509, 628, 768 |
| DpnII | GATC | 6 cut(s) | 120, 487, 493, 507, 626, 766 |
| EaeI | YGGCCR | 2 cut(s) | 63, 775 |
| EagI | CGGCCG | 1 cut(s) | 775 |
| Eam1104I | CTCTTC | 2 cut(s) | 601, 746 |
| EarI | CTCTTC | 2 cut(s) | 601, 746 |
| EciI | GGCGGA | 1 cut(s) | 593 |
| EclXI | CGGCCG | 1 cut(s) | 775 |
| Eco130I | CCWWGG | 2 cut(s) | 663, 894 |
| Eco31I | GGTCTC | 1 cut(s) | 520 |
| Eco47I | GGWCC | 1 cut(s) | 126 |
| Eco52I | CGGCCG | 1 cut(s) | 775 |
| Eco57I | CTGAAG | 1 cut(s) | 657 |
| Eco72I | CACGTG | 1 cut(s) | 762 |
| Eco81I | CCTNAGG | 2 cut(s) | 228, 498 |
| Eco88I | CYCGRG | 1 cut(s) | 517 |
| Eco91I | GGTNACC | 1 cut(s) | 889 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 145 |
| EcoO65I | GGTNACC | 1 cut(s) | 889 |
| EcoRI | GAATTC | 1 cut(s) | 907 |
| EcoT14I | CCWWGG | 2 cut(s) | 663, 894 |
| EgeI | GGCGCC | 3 cut(s) | 345, 387, 669 |
| EheI | GGCGCC | 3 cut(s) | 345, 387, 669 |
| ErhI | CCWWGG | 2 cut(s) | 663, 894 |
| Esp3I | CGTCTC | 2 cut(s) | 109, 821 |
| FaeI | CATG | 7 cut(s) | 70, 135, 494, 748, 898, 1015, 1051 |
| FatI | CATG | 7 cut(s) | 66, 131, 490, 744, 894, 1011, 1047 |
| FbaI | TGATCA | 1 cut(s) | 487 |
| FblI | GTMKAC | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 5 cut(s) | 152, 198, 384, 900, 924 |
| FokI | GGATG | 3 cut(s) | 389, 515, 544 |
| Fsp4HI | GCNGC | 5 cut(s) | 152, 198, 384, 900, 924 |
| FspBI | CTAG | 1 cut(s) | 624 |
| GlaI | GCGC | 4 cut(s) | 345, 365, 387, 669 |
| GluI | GCNGC | 5 cut(s) | 152, 198, 384, 900, 924 |
| GsuI | CTGGAG | 1 cut(s) | 710 |
| HaeII | RGCGCY | 3 cut(s) | 347, 389, 671 |
| HaeIII | GGCC | 6 cut(s) | 65, 151, 226, 649, 720, 777 |
| HapII | CCGG | 8 cut(s) | 42, 223, 272, 350, 392, 613, 739, 920 |
| HhaI | GCGC | 4 cut(s) | 346, 366, 388, 670 |
| Hin1I | GRCGYC | 4 cut(s) | 344, 386, 668, 830 |
| Hin1II | CATG | 7 cut(s) | 70, 135, 494, 748, 898, 1015, 1051 |
| Hin6I | GCGC | 4 cut(s) | 344, 364, 386, 668 |
| HinP1I | GCGC | 4 cut(s) | 344, 364, 386, 668 |
| HincII | GTYRAC | 2 cut(s) | 175, 802 |
| HindII | GTYRAC | 2 cut(s) | 175, 802 |
| HindIII | AAGCTT | 1 cut(s) | 236 |
| HpaII | CCGG | 8 cut(s) | 42, 223, 272, 350, 392, 613, 739, 920 |
| HphI | GGTGA | 4 cut(s) | 181, 445, 602, 901 |
| Hpy166II | GTNNAC | 8 cut(s) | 175, 280, 319, 358, 400, 802, 820, 844 |
| Hpy188I | TCNGA | 3 cut(s) | 120, 250, 256 |
| Hpy188III | TCNNGA | 6 cut(s) | 124, 491, 497, 519, 600, 959 |
| Hpy8I | GTNNAC | 8 cut(s) | 175, 280, 319, 358, 400, 802, 820, 844 |
| Hpy99I | CGWCG | 5 cut(s) | 170, 173, 916, 919, 952 |
| HpyAV | CCTTC | 4 cut(s) | 122, 252, 632, 877 |
| HpyCH4III | ACNGT | 2 cut(s) | 806, 1064 |
| HpyCH4IV | ACGT | 7 cut(s) | 78, 165, 339, 698, 761, 830, 857 |
| HpyCH4V | TGCA | 4 cut(s) | 135, 467, 844, 1021 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 151, 676, 739 |
| HpyF3I | CTNAG | 8 cut(s) | 146, 228, 480, 498, 540, 734, 935, 953 |
| HpySE526I | ACGT | 7 cut(s) | 78, 165, 339, 698, 761, 830, 857 |
| Hsp92I | GRCGYC | 4 cut(s) | 344, 386, 668, 830 |
| Hsp92II | CATG | 7 cut(s) | 70, 135, 494, 748, 898, 1015, 1051 |
| HspAI | GCGC | 4 cut(s) | 344, 364, 386, 668 |
| KasI | GGCGCC | 3 cut(s) | 343, 385, 667 |
| KroI | GCCGGC | 2 cut(s) | 738, 919 |
| KroNI | GCCGGC | 2 cut(s) | 740, 921 |
| Ksp22I | TGATCA | 1 cut(s) | 487 |
| Kzo9I | GATC | 6 cut(s) | 120, 487, 493, 507, 626, 766 |
| LmnI | GCTCC | 2 cut(s) | 304, 521 |
| Lsp1109I | GCAGC | 2 cut(s) | 184, 911 |
| MaeI | CTAG | 1 cut(s) | 624 |
| MaeII | ACGT | 7 cut(s) | 78, 165, 339, 698, 761, 830, 857 |
| MaeIII | GTNAC | 7 cut(s) | 433, 547, 608, 651, 755, 831, 889 |
| MalI | GATC | 6 cut(s) | 122, 489, 495, 509, 628, 768 |
| MboI | GATC | 6 cut(s) | 120, 487, 493, 507, 626, 766 |
| MboII | GAAGA | 6 cut(s) | 305, 588, 715, 760, 763, 1019 |
| MflI | RGATCY | 1 cut(s) | 626 |
| MhlI | GDGCHC | 1 cut(s) | 846 |
| MlsI | TGGCCA | 1 cut(s) | 65 |
| MluCI | AATT | 4 cut(s) | 33, 554, 907, 1072 |
| MluNI | TGGCCA | 1 cut(s) | 65 |
| Mly113I | GGCGCC | 3 cut(s) | 344, 386, 668 |
| MlyI | GAGTC | 5 cut(s) | 260, 455, 807, 964, 1040 |
| Mox20I | TGGCCA | 1 cut(s) | 65 |
| MreI | CGCCGGCG | 1 cut(s) | 919 |
| MroNI | GCCGGC | 2 cut(s) | 738, 919 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1043 |
| MscI | TGGCCA | 1 cut(s) | 65 |
| MseI | TTAA | 3 cut(s) | 32, 426, 930 |
| MslI | CAYNNNNRTG | 2 cut(s) | 777, 1052 |
| Msp20I | TGGCCA | 1 cut(s) | 65 |
| MspA1I | CMGCKG | 3 cut(s) | 311, 733, 902 |
| MspI | CCGG | 8 cut(s) | 42, 223, 272, 350, 392, 613, 739, 920 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 151, 676, 739 |
| NaeI | GCCGGC | 2 cut(s) | 740, 921 |
| NarI | GGCGCC | 3 cut(s) | 344, 386, 668 |
| NcoI | CCATGG | 1 cut(s) | 894 |
| NdeII | GATC | 6 cut(s) | 120, 487, 493, 507, 626, 766 |
| NgoMIV | GCCGGC | 2 cut(s) | 738, 919 |
| NlaIII | CATG | 7 cut(s) | 70, 135, 494, 748, 898, 1015, 1051 |
| NlaIV | GGNNCC | 5 cut(s) | 306, 345, 387, 523, 669 |
| NmuCI | GTSAC | 5 cut(s) | 433, 608, 755, 831, 889 |
| OliI | CACNNNNGTG | 1 cut(s) | 777 |
| PagI | TCATGA | 1 cut(s) | 490 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 704, 923 |
| PdiI | GCCGGC | 2 cut(s) | 740, 921 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1043 |
| PfeI | GAWTC | 5 cut(s) | 25, 257, 603, 727, 1039 |
| PinAI | ACCGGT | 2 cut(s) | 349, 391 |
| PkrI | GCNGC | 5 cut(s) | 153, 199, 385, 901, 925 |
| PleI | GAGTC | 5 cut(s) | 259, 455, 806, 963, 1039 |
| PluTI | GGCGCC | 3 cut(s) | 347, 389, 671 |
| PmaCI | CACGTG | 1 cut(s) | 762 |
| PmlI | CACGTG | 1 cut(s) | 762 |
| PpsI | GAGTC | 5 cut(s) | 259, 455, 806, 963, 1039 |
| Ppu21I | YACGTR | 2 cut(s) | 699, 762 |
| PspCI | CACGTG | 1 cut(s) | 762 |
| PspEI | GGTNACC | 1 cut(s) | 889 |
| PspN4I | GGNNCC | 5 cut(s) | 306, 345, 387, 523, 669 |
| PspPI | GGNCC | 2 cut(s) | 126, 718 |
| PstI | CTGCAG | 1 cut(s) | 469 |
| PstNI | CAGNNNCTG | 2 cut(s) | 254, 473 |
| PsuI | RGATCY | 1 cut(s) | 626 |
| PvuII | CAGCTG | 1 cut(s) | 902 |
| RsaI | GTAC | 4 cut(s) | 320, 359, 401, 447 |
| RsaNI | GTAC | 4 cut(s) | 319, 358, 400, 446 |
| RseI | CAYNNNNRTG | 2 cut(s) | 777, 1052 |
| SaqAI | TTAA | 3 cut(s) | 32, 426, 930 |
| SatI | GCNGC | 5 cut(s) | 152, 198, 384, 900, 924 |
| Sau3AI | GATC | 6 cut(s) | 120, 487, 493, 507, 626, 766 |
| Sau96I | GGNCC | 2 cut(s) | 126, 718 |
| SchI | GAGTC | 5 cut(s) | 260, 455, 807, 964, 1040 |
| SduI | GDGCHC | 1 cut(s) | 846 |
| SfcI | CTRYAG | 1 cut(s) | 465 |
| SfoI | GGCGCC | 3 cut(s) | 345, 387, 669 |
| SgrAI | CRCCGGYG | 2 cut(s) | 349, 919 |
| SinI | GGWCC | 1 cut(s) | 126 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 777, 1052 |
| Sse9I | AATT | 4 cut(s) | 33, 554, 907, 1072 |
| SsiI | CCGC | 6 cut(s) | 152, 311, 383, 578, 731, 923 |
| SspDI | GGCGCC | 3 cut(s) | 343, 385, 667 |
| SspMI | CTAG | 1 cut(s) | 624 |
| StyI | CCWWGG | 2 cut(s) | 663, 894 |
| TaaI | ACNGT | 2 cut(s) | 806, 1064 |
| TaiI | ACGT | 7 cut(s) | 81, 168, 342, 701, 764, 833, 860 |
| TaqI | TCGA | 3 cut(s) | 38, 510, 725 |
| TasI | AATT | 4 cut(s) | 33, 554, 907, 1072 |
| TatI | WGTACW | 1 cut(s) | 318 |
| TauI | GCSGC | 3 cut(s) | 154, 386, 926 |
| TfiI | GAWTC | 5 cut(s) | 25, 257, 603, 727, 1039 |
| Tru1I | TTAA | 3 cut(s) | 32, 426, 930 |
| Tru9I | TTAA | 3 cut(s) | 32, 426, 930 |
| TscAI | CASTG | 2 cut(s) | 693, 846 |
| TseFI | GTSAC | 5 cut(s) | 433, 608, 755, 831, 889 |
| TseI | GCWGC | 2 cut(s) | 197, 899 |
| Tsp45I | GTSAC | 5 cut(s) | 433, 608, 755, 831, 889 |
| TspDTI | ATGAA | 6 cut(s) | 83, 312, 761, 1020, 1036, 1070 |
| TspGWI | ACGGA | 1 cut(s) | 728 |
| TspRI | CASTG | 2 cut(s) | 693, 846 |
| VneI | GTGCAC | 1 cut(s) | 842 |
| VpaK11BI | GGWCC | 1 cut(s) | 126 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 145 |
| XapI | RAATTY | 2 cut(s) | 554, 907 |
| XmiI | GTMKAC | 1 cut(s) | 279 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1043 |
| XspI | CTAG | 1 cut(s) | 624 |
| ZraI | GACGTC | 1 cut(s) | 831 |