FvH4_3g04980

CSC1-like protein ERD4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0011925
Physical Location & Seq
Reverse (-)
2859687 .. 2865442
5756 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g04980.t3

Sequence Viewer

Length: 2181 bp
ATGGATCTCAGTTCGTTCCTGACATCGTTAGGGACCTCGTTTCTGATATTTTTTATTCTTATGTTGCTGTTCGCGTGGCTTTCGAAGAAGCCTGGGAACGCGGTGGTGTACTATCCGAATCGGATCCTCAAGGGTTTGGATCCGTGGGAGGGCGGGTCCAAGACCCGGAACCCGTTTGCTTGGATCAAAGAAGCTCTGACTTCAACAGAGCAGGAAGTTATAGCTCTCTCTGGGGTTGACACTGCTGTCTACTTCGTCTTCTTGAGCACTGTGTTGGGAATACTGGTTTTGTCCAGTTTGATACTGCTACCAGTGCTTCTGCCAGTTTCTGCTACCGACATTGGAGACGCCATAACAAACACCACCACAAGCAACGGGACTTTCTCTGACCTTGACAAGTTATCCATAGGACATGTCCAGGCGAAGAGTCCAAGGCTGTGGGCGTATCTCCTAGGTGTCTACTGGGTTTCTTTTGTTTCATATTTCTTGTTGTGGAAGGCGTATAAACATGTCTCCGATCTGAGATCCAACGCTTTAATGACTCCTGATATCAAGCCTGAACAATTTGCTGTTGTTGTTAGAGACATACCTGCTGTCCCTGAAGGTCCAAATAGAAAGGAACAGGTGGATTCATATTTCAGGGCCATCTACCCCGAGACATATTACAAATCAATGATTGTTACAAATAATAAAGAGGTGAACAAACTCTGGAAAGAATTAGAAGGGTTTAGGAAAAAGCTTGAACGTGCTGAAGCAGTTTATGCAGCATCCAAAACAACAGGCAGTCCAGAAGGAACAAGACCCACCAATAAAACTGGCTTCCTTGGTCTTTGTGGGGCAAAGGTTGATAGTATAGAGTACTACACTAAGAAGATTAATGAAACAATCCCAAAATTGGAAGCTGAACAGAAAGTCACTCTCAGAGAGAAGCAGCTAAATGCTGCTCTAGTTTTCTTCACTAATAGGGTGACTGCAGCTTCTGCAGCACAGACTCTACATGCCCGAATGGTTGACACATGGACAGTCATGGCTGCTCCTGAACCTCGTCAAGTACTTTGGCCTAATCTGAAAATCAAGTTTTTCCAGAGGCAAGTGCGGCAGTATGTTGTGTATATCATTGTGGCTCTGACCGTAGTATTTTATATGATCCCAATTGGATTCATCTCTGCAGTCACAACTCTGGATAATCTGGTAAAATTTATCCCATTTATCAAGCCAGTTGTGAATCAATCTGCGCTGAAGACGGTACTGGAGGCATATCTTCCTCAGCTTGCACTTATAATCTTCTTAGCTTTGTTGCCAAAGCTCCTTCTTGCTCTATCTAAAGCTGAGGGAATTCCTTCTCAGAGCCATGCAATAAGGGCTGCAGCTGGAAAATATTTCTACTTCATTGTGTTCAATGTTTTCCTTGGAGTTACAGTGGGTGGAGCCTTGTTCAGTACATTCAAGGAAATAGAGGATGATCCTAATAAACTTGTTCCCTTACTGGCAACGAGCCTCCCAGGAAGTGCAACCTACTTCATCACTTTTGTGGCACTGAAGTTTTTTGTTGGCTATGGTCTCGAACTATCCCGAATAGTTCCTCTGATTATTTTCCATCTGAAAAGGAAGTATCTTTGTAAGACTGAAGGCGAGTTGAAAGCAGCTTGGCAACCTAGTGATCTTGGGTATGGGACTAGAGTTCCAGGTGATATGCTAATCATAACAGTTGCTCTCTGCTACTCTGTTATAGCTCCACTGATCCTTCCATTTGGTGTGCTGTACTTTGGCATCGGATGGCTTGTCCTTAGAAACCAGGCACTTAAAGTGTATTGTCCAGCGTATGAAAGCAATGGAAAGTTCTGGCCACACATGCAGCTCCGGATTCTTGCAGCTCTGATATTGTACCAAGTTACAATGGTTGGTTTCTTGGGGGTAAAGAAATTCGTCTATGCGCCGCTCTTGATTCCACTTCCTATCCTCTCCTTGATCTTCGGTTACATCTGTAGCAAGAAATTCTACCGGTTTTTCCAAGACACAGCTCTTGAAGTTGCTTCTCACGAACTAAAGGAGATTCCTAACATGGAGCAAATCTATAAAGCTTACCTCCCACAAAGCCTGTGCTCTGGGAAGGTACTACTAGATGATGATCAATTCGAAGATGCCAAGTCAAATGTGTCCAGAACAGCATCATTTGCCTGA

Protein Analysis

727

Amino Acids

81.33

Weight (kDa)

9.27

Isoelectric Point (pI)

28.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 41 - 114 3.9e-11 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 136 - 303 2.1e-37 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 314 - 584 8.2e-80 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011925)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30360
fragaria_vesca FvH4_3g04980 FvH4_3g04980
malus_domestica MD05G1278500.v1.1 MD10G1257300.v1.1
prunus_persica Prupe.4G086300_v2.0.a1
pyrus_communis pycom05g25910 pycom10g21280 pycom10g21310 pycom10g21330
rosa_chinensis RchiOBHm_Chr5g0015001
rosa_laevigata RLG00000032159
rosa_multiflora Rmu_sc0004889.1_g000022
rosa_roxburghii Rroxscaffold_1G00061540
rosa_rugosa Rorug05G0022600 Rorug05G0022700
rosa_samantha Rh5AG117900 Rh5BG115100
rosa_wichuraiana Rw5G010160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1280
AasI GACNNNNNNGTC 1 cut(s) 245
Acc36I ACCTGC 1 cut(s) 598
AccBSI CCGCTC 1 cut(s) 1939
AccI GTMKAC 2 cut(s) 249, 459
AccII CGCG 2 cut(s) 74, 101
AccIII TCCGGA 1 cut(s) 1860
AciI CCGC 4 cut(s) 101, 153, 1096, 1937
AcoI YGGCCR 1 cut(s) 1844
AcsI RAATTY 4 cut(s) 1196, 1335, 1922, 1994
AcuI CTGAAG 5 cut(s) 621, 771, 1259, 1559, 1647
AcyI GRCGYC 1 cut(s) 348
AfaI GTAC 8 cut(s) 110, 860, 1053, 1248, 1441, 1763, 1886, 2115
AfiI CCNNNNNNNGG 3 cut(s) 149, 165, 895
AflIII ACRYGT 2 cut(s) 412, 508
AgeI ACCGGT 1 cut(s) 2001
AgsI TTSAA 6 cut(s) 204, 743, 1399, 1447, 1639, 2027
AjnI CCWGG 5 cut(s) 91, 417, 1501, 1684, 1794
AleI CACNNNNGTG 1 cut(s) 1529
Alw21I GWGCWC 2 cut(s) 269, 2105
Alw26I GTCTC 5 cut(s) 339, 517, 576, 650, 1565
AlwNI CAGNNNCTG 2 cut(s) 329, 980
Ama87I CYCGRG 1 cut(s) 653
Aor13HI TCCGGA 1 cut(s) 1860
AoxI GGCC 3 cut(s) 642, 1058, 1844
ApoI RAATTY 4 cut(s) 1196, 1335, 1922, 1994
AseI ATTAAT 1 cut(s) 876
AsiGI ACCGGT 1 cut(s) 2001
Asp700I GAANNNNTTC 1 cut(s) 1339
AspA2I CCTAGG 1 cut(s) 451
AspLEI GCGC 2 cut(s) 1237, 1936
AspS9I GGNCC 4 cut(s) 33, 156, 605, 642
AsuC2I CCSGG 1 cut(s) 166
AsuHPI GGTGA 3 cut(s) 709, 979, 1700
AsuII TTCGAA 2 cut(s) 83, 2136
AvaI CYCGRG 1 cut(s) 653
AvaII GGWCC 3 cut(s) 33, 156, 605
AvrII CCTAGG 1 cut(s) 451
BalI TGGCCA 1 cut(s) 1846
BamHI GGATCC 2 cut(s) 123, 139
BbsI GAAGAC 2 cut(s) 250, 1247
Bbv12I GWGCWC 2 cut(s) 269, 2105
BbvCI CCTCAGC 2 cut(s) 1266, 1329
BccI CCATC 3 cut(s) 653, 1605, 1770
BciT130I CCWGG 5 cut(s) 93, 419, 1503, 1686, 1796
BclI TGATCA 1 cut(s) 2128
BcnI CCSGG 1 cut(s) 166
BcoDI GTCTC 5 cut(s) 339, 517, 576, 650, 1565
BfaI CTAG 5 cut(s) 452, 947, 1656, 1677, 2120
BfmI CTRYAG 5 cut(s) 972, 981, 1167, 1365, 1984
BfuAI ACCTGC 1 cut(s) 598
BlnI CCTAGG 1 cut(s) 451
BmcAI AGTACT 2 cut(s) 860, 1053
Bme1390I CCNGG 6 cut(s) 93, 166, 419, 1503, 1686, 1796
Bme18I GGWCC 3 cut(s) 33, 156, 605
BmeT110I CYCGRG 1 cut(s) 653
BmgT120I GGNCC 4 cut(s) 33, 156, 605, 642
BmiI GGNNCC 6 cut(s) 34, 125, 141, 157, 170, 1429
BmrFI CCNGG 6 cut(s) 93, 166, 419, 1503, 1686, 1796
BmrI ACTGGG 1 cut(s) 472
BmsI GCATC 4 cut(s) 776, 1779, 2131, 2177
BmuI ACTGGG 1 cut(s) 472
BpiI GAAGAC 2 cut(s) 250, 1247
BpmI CTGGAG 1 cut(s) 1271
Bpu10I CCTNAGC 2 cut(s) 1266, 1329
Bpu14I TTCGAA 2 cut(s) 83, 2136
BpuEI CTTGAG 2 cut(s) 113, 283
BpuMI CCSGG 1 cut(s) 166
BsaBI GATNNNNATC 1 cut(s) 2127
BsaHI GRCGYC 1 cut(s) 348
BsaI GGTCTC 1 cut(s) 1565
BsaJI CCNNGG 7 cut(s) 92, 143, 431, 451, 823, 1408, 1501
BsaWI WCCGGW 2 cut(s) 1860, 2001
BsaXI ACNNNNNCTCC 4 cut(s) 140, 170, 1404, 1434
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 165, 895
Bse118I RCCGGY 1 cut(s) 2001
Bse1I ACTGG 9 cut(s) 288, 294, 311, 323, 467, 820, 1217, 1254, 1491
Bse3DI GCAATG 1 cut(s) 1837
Bse8I GATNNNNATC 1 cut(s) 2127
BseAI TCCGGA 1 cut(s) 1860
BseBI CCWGG 5 cut(s) 93, 419, 1503, 1686, 1796
BseDI CCNNGG 7 cut(s) 92, 143, 431, 451, 823, 1408, 1501
BseGI GGATG 3 cut(s) 767, 1465, 1781
BseJI GATNNNNATC 1 cut(s) 2127
BseLI CCNNNNNNNGG 3 cut(s) 149, 165, 895
BseMI GCAATG 1 cut(s) 1837
BseMII CTCAG 6 cut(s) 22, 512, 934, 1280, 1320, 1358
BseNI ACTGG 9 cut(s) 288, 294, 311, 323, 467, 820, 1217, 1254, 1491
Bsh1236I CGCG 2 cut(s) 74, 101
BshFI GGCC 3 cut(s) 644, 1060, 1846
BshTI ACCGGT 1 cut(s) 2001
BsiHKAI GWGCWC 2 cut(s) 269, 2105
BsiHKCI CYCGRG 1 cut(s) 653
BsiSI CCGG 3 cut(s) 166, 1861, 2002
BslFI GGGAC 4 cut(s) 46, 391, 581, 1687
BslI CCNNNNNNNGG 3 cut(s) 149, 165, 895
BsmAI GTCTC 5 cut(s) 339, 517, 576, 650, 1565
BsmBI CGTCTC 1 cut(s) 339
BsmFI GGGAC 4 cut(s) 46, 391, 581, 1687
BsnI GGCC 3 cut(s) 644, 1060, 1846
Bso31I GGTCTC 1 cut(s) 1565
BsoBI CYCGRG 1 cut(s) 653
Bsp119I TTCGAA 2 cut(s) 83, 2136
Bsp1286I GDGCHC 2 cut(s) 269, 2105
Bsp13I TCCGGA 1 cut(s) 1860
BspACI CCGC 4 cut(s) 101, 153, 1096, 1937
BspANI GGCC 3 cut(s) 644, 1060, 1846
BspCNI CTCAG 6 cut(s) 21, 513, 933, 1279, 1321, 1357
BspEI TCCGGA 1 cut(s) 1860
BspFNI CGCG 2 cut(s) 74, 101
BspLI GGNNCC 6 cut(s) 34, 125, 141, 157, 170, 1429
BspMAI CTGCAG 4 cut(s) 976, 985, 1171, 1369
BspMI ACCTGC 1 cut(s) 598
BspT104I TTCGAA 2 cut(s) 83, 2136
BspTNI GGTCTC 1 cut(s) 1565
BsrBI CCGCTC 1 cut(s) 1939
BsrDI GCAATG 1 cut(s) 1837
BsrFI RCCGGY 1 cut(s) 2001
BsrI ACTGG 9 cut(s) 288, 294, 311, 323, 467, 820, 1217, 1254, 1491
BssAI RCCGGY 1 cut(s) 2001
BssECI CCNNGG 7 cut(s) 92, 143, 431, 451, 823, 1408, 1501
BssNI GRCGYC 1 cut(s) 348
BssT1I CCWWGG 4 cut(s) 431, 451, 823, 1408
Bst2UI CCWGG 5 cut(s) 93, 419, 1503, 1686, 1796
Bst4CI ACNGT 6 cut(s) 271, 1024, 1132, 1246, 1420, 1708
Bst6I CTCTTC 1 cut(s) 419
BstACI GRCGYC 1 cut(s) 348
BstAPI GCANNNNNTGC 3 cut(s) 761, 980, 2174
BstBI TTCGAA 2 cut(s) 83, 2136
BstC8I GCNNGC 1 cut(s) 1272
BstDEI CTNAG 9 cut(s) 8, 521, 867, 920, 1266, 1288, 1329, 1344, 1787
BstDSI CCRYGG 1 cut(s) 143
BstF5I GGATG 3 cut(s) 767, 1465, 1781
BstFNI CGCG 2 cut(s) 74, 101
BstHHI GCGC 2 cut(s) 1237, 1936
BstMAI GTCTC 5 cut(s) 339, 517, 576, 650, 1565
BstMWI GCNNNNNNNGC 8 cut(s) 313, 761, 980, 983, 1096, 1361, 1852, 2174
BstNI CCWGG 5 cut(s) 93, 419, 1503, 1686, 1796
BstNSI RCATGY 4 cut(s) 416, 512, 1001, 1855
BstSCI CCNGG 6 cut(s) 91, 164, 417, 1501, 1684, 1794
BstSFI CTRYAG 5 cut(s) 972, 981, 1167, 1365, 1984
BstUI CGCG 2 cut(s) 74, 101
BstV2I GAAGAC 2 cut(s) 250, 1247
BstX2I RGATCY 4 cut(s) 4, 123, 139, 524
BstXI CCANNNNNNTGG 1 cut(s) 438
BstYI RGATCY 4 cut(s) 4, 123, 139, 524
BsuRI GGCC 3 cut(s) 644, 1060, 1846
BtgI CCRYGG 1 cut(s) 143
BtsCI GGATG 3 cut(s) 767, 1465, 1781
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 6 cut(s) 240, 267, 318, 1425, 1535, 1736
BveI ACCTGC 1 cut(s) 598
Cac8I GCNNGC 1 cut(s) 1272
CaiI CAGNNNCTG 2 cut(s) 329, 980
CfoI GCGC 2 cut(s) 1237, 1936
Cfr10I RCCGGY 1 cut(s) 2001
Cfr13I GGNCC 4 cut(s) 33, 156, 605, 642
CseI GACGC 1 cut(s) 356
Csp6I GTAC 8 cut(s) 109, 859, 1052, 1247, 1440, 1762, 1885, 2114
CspAI ACCGGT 1 cut(s) 2001
CviAII CATG 8 cut(s) 413, 509, 998, 1017, 1027, 1352, 1852, 2062
CviQI GTAC 8 cut(s) 109, 859, 1052, 1247, 1440, 1762, 1885, 2114
DdeI CTNAG 9 cut(s) 8, 521, 867, 920, 1266, 1288, 1329, 1344, 1787
DrdI GACNNNNNNGTC 1 cut(s) 245
DseDI GACNNNNNNGTC 1 cut(s) 245
EaeI YGGCCR 1 cut(s) 1844
Eam1104I CTCTTC 1 cut(s) 419
EarI CTCTTC 1 cut(s) 419
Eco130I CCWWGG 4 cut(s) 431, 451, 823, 1408
Eco31I GGTCTC 1 cut(s) 1565
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 3 cut(s) 33, 156, 605
Eco57I CTGAAG 5 cut(s) 621, 771, 1259, 1559, 1647
Eco88I CYCGRG 1 cut(s) 653
EcoO109I RGGNCCY 1 cut(s) 33
EcoRI GAATTC 1 cut(s) 1335
EcoRII CCWGG 5 cut(s) 91, 417, 1501, 1684, 1794
EcoRV GATATC 1 cut(s) 550
EcoT14I CCWWGG 4 cut(s) 431, 451, 823, 1408
ErhI CCWWGG 4 cut(s) 431, 451, 823, 1408
Esp3I CGTCTC 1 cut(s) 339
FaeI CATG 8 cut(s) 416, 512, 1001, 1020, 1030, 1355, 1855, 2065
FaqI GGGAC 4 cut(s) 46, 391, 581, 1687
FatI CATG 8 cut(s) 412, 508, 997, 1016, 1026, 1351, 1851, 2061
FauI CCCGC 1 cut(s) 146
FbaI TGATCA 1 cut(s) 2128
FblI GTMKAC 2 cut(s) 249, 459
FokI GGATG 3 cut(s) 754, 1472, 1788
FspBI CTAG 5 cut(s) 452, 947, 1656, 1677, 2120
GlaI GCGC 2 cut(s) 1236, 1935
GsuI CTGGAG 1 cut(s) 1271
HaeIII GGCC 3 cut(s) 644, 1060, 1846
HapII CCGG 3 cut(s) 166, 1861, 2002
HgaI GACGC 1 cut(s) 356
HhaI GCGC 2 cut(s) 1237, 1936
Hin1I GRCGYC 1 cut(s) 348
Hin1II CATG 8 cut(s) 416, 512, 1001, 1020, 1030, 1355, 1855, 2065
Hin6I GCGC 2 cut(s) 1235, 1934
HinP1I GCGC 2 cut(s) 1235, 1934
HincII GTYRAC 2 cut(s) 238, 1012
HindII GTYRAC 2 cut(s) 238, 1012
HindIII AAGCTT 2 cut(s) 737, 2079
HpaII CCGG 3 cut(s) 166, 1861, 2002
HphI GGTGA 3 cut(s) 709, 979, 1700
Hpy166II GTNNAC 6 cut(s) 109, 238, 250, 460, 700, 1012
Hpy8I GTNNAC 6 cut(s) 109, 238, 250, 460, 700, 1012
HpyAV CCTTC 9 cut(s) 490, 596, 716, 785, 1319, 1350, 1622, 1754, 2104
HpyCH4III ACNGT 6 cut(s) 271, 1024, 1132, 1246, 1420, 1708
HpyCH4IV ACGT 1 cut(s) 745
HpyF10VI GCNNNNNNNGC 8 cut(s) 313, 761, 980, 983, 1096, 1361, 1852, 2174
HpyF3I CTNAG 9 cut(s) 8, 521, 867, 920, 1266, 1288, 1329, 1344, 1787
HpySE526I ACGT 1 cut(s) 745
Hsp92I GRCGYC 1 cut(s) 348
Hsp92II CATG 8 cut(s) 416, 512, 1001, 1020, 1030, 1355, 1855, 2065
HspAI GCGC 2 cut(s) 1235, 1934
Kpn2I TCCGGA 1 cut(s) 1860
Ksp22I TGATCA 1 cut(s) 2128
LmnI GCTCC 6 cut(s) 1039, 1311, 1427, 1738, 1863, 2065
LweI GCATC 4 cut(s) 776, 1779, 2131, 2177
MaeI CTAG 5 cut(s) 452, 947, 1656, 1677, 2120
MaeII ACGT 1 cut(s) 745
MaeIII GTNAC 7 cut(s) 679, 913, 967, 1171, 1414, 1891, 1976
MbiI CCGCTC 1 cut(s) 1939
MfeI CAATTG 1 cut(s) 1152
MflI RGATCY 4 cut(s) 4, 123, 139, 524
MhlI GDGCHC 2 cut(s) 269, 2105
MlsI TGGCCA 1 cut(s) 1846
MluCI AATT 9 cut(s) 563, 716, 893, 1152, 1196, 1335, 1922, 1994, 2132
MluNI TGGCCA 1 cut(s) 1846
MlyI GAGTC 3 cut(s) 436, 535, 985
MmeI TCCRAC 1 cut(s) 552
Mox20I TGGCCA 1 cut(s) 1846
MroI TCCGGA 1 cut(s) 1860
MroXI GAANNNNTTC 1 cut(s) 1339
MscI TGGCCA 1 cut(s) 1846
MseI TTAA 3 cut(s) 536, 876, 1803
MslI CAYNNNNRTG 1 cut(s) 1529
Msp20I TGGCCA 1 cut(s) 1846
MspA1I CMGCKG 1 cut(s) 1370
MspI CCGG 3 cut(s) 166, 1861, 2002
MspR9I CCNGG 6 cut(s) 93, 166, 419, 1503, 1686, 1796
MunI CAATTG 1 cut(s) 1152
MvaI CCWGG 5 cut(s) 93, 419, 1503, 1686, 1796
MvnI CGCG 2 cut(s) 74, 101
MwoI GCNNNNNNNGC 8 cut(s) 313, 761, 980, 983, 1096, 1361, 1852, 2174
NciI CCSGG 1 cut(s) 166
NlaIII CATG 8 cut(s) 416, 512, 1001, 1020, 1030, 1355, 1855, 2065
NlaIV GGNNCC 6 cut(s) 34, 125, 141, 157, 170, 1429
NmuCI GTSAC 3 cut(s) 913, 967, 1171
NspI RCATGY 4 cut(s) 416, 512, 1001, 1855
NspV TTCGAA 2 cut(s) 83, 2136
OliI CACNNNNGTG 1 cut(s) 1529
PciI ACATGT 2 cut(s) 412, 508
PdmI GAANNNNTTC 1 cut(s) 1339
PfeI GAWTC 7 cut(s) 118, 629, 1158, 1225, 1864, 1945, 2053
PinAI ACCGGT 1 cut(s) 2001
PleI GAGTC 3 cut(s) 435, 535, 985
PpsI GAGTC 3 cut(s) 435, 535, 985
PpuMI RGGWCCY 1 cut(s) 33
PscI ACATGT 2 cut(s) 412, 508
PshBI ATTAAT 1 cut(s) 876
PsiI TTATAA 1 cut(s) 1280
Psp5II RGGWCCY 1 cut(s) 33
Psp6I CCWGG 5 cut(s) 91, 417, 1501, 1684, 1794
PspGI CCWGG 5 cut(s) 91, 417, 1501, 1684, 1794
PspN4I GGNNCC 6 cut(s) 34, 125, 141, 157, 170, 1429
PspPI GGNCC 4 cut(s) 33, 156, 605, 642
PspPPI RGGWCCY 1 cut(s) 33
PstI CTGCAG 4 cut(s) 976, 985, 1171, 1369
PstNI CAGNNNCTG 2 cut(s) 329, 980
PsuI RGATCY 4 cut(s) 4, 123, 139, 524
PvuII CAGCTG 1 cut(s) 1370
RsaI GTAC 8 cut(s) 110, 860, 1053, 1248, 1441, 1763, 1886, 2115
RsaNI GTAC 8 cut(s) 109, 859, 1052, 1247, 1440, 1762, 1885, 2114
RseI CAYNNNNRTG 1 cut(s) 1529
SaqAI TTAA 3 cut(s) 536, 876, 1803
Sau96I GGNCC 4 cut(s) 33, 156, 605, 642
ScaI AGTACT 2 cut(s) 860, 1053
SchI GAGTC 3 cut(s) 436, 535, 985
ScrFI CCNGG 6 cut(s) 93, 166, 419, 1503, 1686, 1796
SduI GDGCHC 2 cut(s) 269, 2105
SfaNI GCATC 4 cut(s) 776, 1779, 2131, 2177
SfcI CTRYAG 5 cut(s) 972, 981, 1167, 1365, 1984
SfuI TTCGAA 2 cut(s) 83, 2136
SinI GGWCC 3 cut(s) 33, 156, 605
SmiMI CAYNNNNRTG 1 cut(s) 1529
SmlI CTYRAG 2 cut(s) 128, 262
SmoI CTYRAG 2 cut(s) 128, 262
Sse9I AATT 9 cut(s) 563, 716, 893, 1152, 1196, 1335, 1922, 1994, 2132
SsiI CCGC 4 cut(s) 101, 153, 1096, 1937
SspI AATATT 1 cut(s) 1379
SspMI CTAG 5 cut(s) 452, 947, 1656, 1677, 2120
StyD4I CCNGG 6 cut(s) 91, 164, 417, 1501, 1684, 1794
StyI CCWWGG 4 cut(s) 431, 451, 823, 1408
TaaI ACNGT 6 cut(s) 271, 1024, 1132, 1246, 1420, 1708
TaiI ACGT 1 cut(s) 748
TaqI TCGA 3 cut(s) 83, 1563, 2136
TasI AATT 9 cut(s) 563, 716, 893, 1152, 1196, 1335, 1922, 1994, 2132
TatI WGTACW 5 cut(s) 108, 858, 1051, 1439, 1761
TauI GCSGC 2 cut(s) 1099, 1939
TfiI GAWTC 7 cut(s) 118, 629, 1158, 1225, 1864, 1945, 2053
Tru1I TTAA 3 cut(s) 536, 876, 1803
Tru9I TTAA 3 cut(s) 536, 876, 1803
TscAI CASTG 6 cut(s) 247, 274, 318, 1425, 1542, 1743
TseFI GTSAC 3 cut(s) 913, 967, 1171
Tsp45I GTSAC 3 cut(s) 913, 967, 1171
TspDTI ATGAA 7 cut(s) 468, 621, 894, 1150, 1378, 1510, 1839
TspGWI ACGGA 1 cut(s) 132
TspRI CASTG 6 cut(s) 247, 274, 318, 1425, 1542, 1743
VpaK11BI GGWCC 3 cut(s) 33, 156, 605
VspI ATTAAT 1 cut(s) 876
XapI RAATTY 4 cut(s) 1196, 1335, 1922, 1994
XceI RCATGY 4 cut(s) 416, 512, 1001, 1855
XmaJI CCTAGG 1 cut(s) 451
XmiI GTMKAC 2 cut(s) 249, 459
XmnI GAANNNNTTC 1 cut(s) 1339
XspI CTAG 5 cut(s) 452, 947, 1656, 1677, 2120
ZrmI AGTACT 2 cut(s) 860, 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.