MD10G1257300.v1.1

CSC1-like protein ERD4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0011925
Physical Location & Seq
Reverse (-)
35151193 .. 35155260
4068 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1257300.v1.1.491

Sequence Viewer

Length: 2178 bp
ATGGATCTCAGTTCGTTCTTGACGTCCTTAGGGACTTCCTTCCTCATATTTGTGGTTCTGATGTTTTTGTTCACATGGCTTTCGAGAAAGCCTGGGAACACTGTGGTTTACTATCCGAATCGGATCTTGAGAGGGTTGGATCCATGGGAGGGCGGGTCCATGACCCGGAACCCGTTTGCTTGGATCAAAGAGGCTCTGTATTCCACTGAGCAGGAAATTATTTCCGTGTCAGGGGTCGACACTGCTGTGTACTTTGTGTTCATGAGCACTGTGTTGGGTATATTGGTTTTATCTAGCATTGTTCTGCTACCAATTCTTCTGTCAGTTGCTGCCACCGAAGAAGCGCATAAGTTAGCCGACGCAAGCGTAAGCAATGGCACTTTTAGTGACCTTGACCACTTATCCATGGGACATCTCAAGGAGAAGAGTCCTAGGTTGTGGGCATTTCTAGTTGGTGTCTACTGGGTTTCTTTTGTCACATACGTCTTGCTGTGGAAGGCATATAAACATGCCTCCAACCTGAGAGCCAGTGCTCTAATGTCTCCTCAAGCGAAGCCAGAACAATTTGCCATTCTTGTCAGAGACATACCTGACGTCCCCGAAGGTCAAATTAGAAAGGAACAGGTCGATTCTTATTTTAAGACCATCTACCCTGATACATTTTACAGATCATTGGTTGTCACAGACAACAAAGAGGTGAACAAAATTTGGAAAGAGTTAGAAGGGTATAAGAAGAAGCTTGCGCGCGCTGAAGCAGTTTATGCAATATCGAAGGACACTGGCAAATCAGAAGGAACAAGACCCACTAACAAAACCGGGTTCCTTGGTCTTTGTGGGGCAAAAGTAGACAGTATTGATTACTACACTAAGAAGATTAATGAATTAACCCCAAAACTGGAGGCTGAACAGAAAGCCACTCTCAGAGAGAAGCAGCAAAATGCCGCTCTAGTTTTTTTCACCAGTAGGGTGACTGCAGCTGCTGCAGCTCAGACTCTACATGCCCAACTTGTTGACACGTGGATAGTCACAGAGGCTCCTGAACCTCGTCAACTACTTTGGCGTAATCTCAAAATCAAGTTTTTTCAGAGACAGGTGCGGCAATATGTTGTGTATATCATTGTGGCTCTGACCGTTTTGTTTTTTATGGTTCCCATTGCCGCTATCTCTGCATTCACAACTCTGGAGAATCTGAAGAAACTTCTTCCGTTTCTAAAGCCAATTTTGAAGCAAAAGGCGATTAGGACAGTGCTAGAGGCTTATCTACCTCAAATTGCACTCATACTCTTTCTAGCTTTCTTGCCAAAGTTCCTTCTGTTTTTGTCTAAGACTGAGGGAATCCCTTCCCTGAGCCATGCAGTAAGGGCTTCTTCCGGGAAATACTTCTACTTCACTGTCTTCAATGTTTTTATTGGAGTTACCGTAGGTGGAACCTTATTCAGTACATTCAAGACTATCGAGAAGGATCCTAACTCTATTGTTGACTTACTTGCAACCAGCCTCCCTGCCAATGCAACTTACTTCCTCACCTTTGTGGCCCTGAAGTTTTTCGTTGGATATGGTCTTGAACTGTTCCGACTAGTTCCTCTGATCATTTTCCATATAAAGAGGAAGTATGTCTGTAAGACCGAAGCTGAGGTGAAGGCAGCTTGGTTTCCTAGTGATCTTGGATATGGGACTAGAGTACCTGGTGATATGCTCATCATTACAATTGTCCTCTGCTACTCTGTTATTGCTCCGCTGATTCTTCCATTTGGTGTGCTTTACTTCGGCCTTGGATGGCTTGTCCTTCGAAATCAGGCACTCAAAGTTTACGTTCCATCGTATGAAAGCTATGGCAGGATGTGGCCGCACATCCAAGTTCGACTCATTGCATCTCTGATACTGTACCAAGTTACCATGTTTGGTTATTTTGGGGTGAAGAAATTCGTCTATGCACCATTCTTACTTCCACTTCCTATCTTGTCCTTGCTTTATATCTTCATCTGCAGCAAAAAATTCTACCATTTTTTCCAACACACTGCGCTTGAAGTTGCCGCACACGAACTCAAGGAGATTCCTAACATGGAGCAAGTTTACAGAGCTTTCATCCCACCGAGCCTGAGCTCCGAGAAGCTAAACCATGATCAATTCGAAGACGCTCAATCCAACGTTTCGAGGACAGCAGCATCGTTGGCCTAA

Protein Analysis

726

Amino Acids

82.04

Weight (kDa)

9.38

Isoelectric Point (pI)

30.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 5 - 166 7.4e-31 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 188 - 355 1.6e-36 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 366 - 637 9.8e-81 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011925)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30360
fragaria_vesca FvH4_3g04980 FvH4_3g04980
malus_domestica MD05G1278500.v1.1 MD10G1257300.v1.1
prunus_persica Prupe.4G086300_v2.0.a1
pyrus_communis pycom05g25910 pycom10g21280 pycom10g21310 pycom10g21330
rosa_chinensis RchiOBHm_Chr5g0015001
rosa_laevigata RLG00000032159
rosa_multiflora Rmu_sc0004889.1_g000022
rosa_roxburghii Rroxscaffold_1G00061540
rosa_rugosa Rorug05G0022600 Rorug05G0022700
rosa_samantha Rh5AG117900 Rh5BG115100
rosa_wichuraiana Rw5G010160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 26, 597
AccBSI CCGCTC 1 cut(s) 944
AccI GTMKAC 3 cut(s) 237, 459, 846
AccII CGCG 2 cut(s) 745, 747
AciI CCGC 7 cut(s) 153, 942, 1096, 1158, 1736, 1847, 2034
AclI AACGTT 1 cut(s) 2148
AclWI GGATC 7 cut(s) 12, 131, 134, 147, 191, 1457, 1470
AcoI YGGCCR 1 cut(s) 1844
AcsI RAATTY 3 cut(s) 705, 1922, 1994
AcuI CTGAAG 3 cut(s) 771, 1211, 1559
AcvI CACGTG 1 cut(s) 1017
AcyI GRCGYC 2 cut(s) 23, 594
AfaI GTAC 4 cut(s) 251, 1441, 1683, 1886
AfiI CCNNNNNNNGG 4 cut(s) 149, 165, 231, 895
AflIII ACRYGT 1 cut(s) 1014
AgsI TTSAA 5 cut(s) 1225, 1399, 1447, 1565, 2027
AhlI ACTAGT 1 cut(s) 1576
AjnI CCWGG 2 cut(s) 91, 1684
AleI CACNNNNGTG 2 cut(s) 245, 1529
Alw21I GWGCWC 3 cut(s) 269, 535, 2105
Alw26I GTCTC 3 cut(s) 546, 576, 1081
AlwI GGATC 7 cut(s) 12, 131, 134, 147, 191, 1457, 1470
AlwNI CAGNNNCTG 2 cut(s) 329, 980
AoxI GGCC 4 cut(s) 1533, 1768, 1844, 2172
ApeKI GCWGC 9 cut(s) 329, 931, 974, 977, 980, 983, 1643, 1986, 2162
ApoI RAATTY 3 cut(s) 705, 1922, 1994
AseI ATTAAT 1 cut(s) 876
Asp700I GAANNNNTTC 4 cut(s) 1339, 1379, 1544, 1922
AspA2I CCTAGG 1 cut(s) 431
AspLEI GCGC 5 cut(s) 346, 745, 747, 749, 2023
AspS9I GGNCC 2 cut(s) 156, 1534
AsuC2I CCSGG 3 cut(s) 166, 817, 1372
AsuHPI GGTGA 7 cut(s) 709, 949, 979, 1516, 1648, 1700, 1927
AsuII TTCGAA 2 cut(s) 1789, 2130
AvaII GGWCC 1 cut(s) 156
AvrII CCTAGG 1 cut(s) 431
AxyI CCTNAGG 1 cut(s) 28
BaeI ACNNNNGTAYC 2 cut(s) 1665, 1698
BamHI GGATCC 2 cut(s) 139, 1462
BanII GRGCYC 1 cut(s) 2105
BbrPI CACGTG 1 cut(s) 1017
BbsI GAAGAC 2 cut(s) 1387, 2139
Bbv12I GWGCWC 3 cut(s) 269, 535, 2105
BbvCI CCTCAGC 1 cut(s) 1632
BbvI GCAGC 9 cut(s) 316, 943, 964, 967, 986, 995, 1655, 1998, 2174
BccI CCATC 3 cut(s) 653, 1770, 1825
BciT130I CCWGG 2 cut(s) 93, 1686
BclI TGATCA 2 cut(s) 1587, 2122
BcnI CCSGG 3 cut(s) 166, 817, 1372
BcoDI GTCTC 3 cut(s) 546, 576, 1081
BcuI ACTAGT 1 cut(s) 1576
BfaI CTAG 9 cut(s) 294, 432, 449, 947, 1250, 1289, 1577, 1656, 1677
BfmI CTRYAG 3 cut(s) 972, 981, 1984
BlnI CCTAGG 1 cut(s) 431
Bme1390I CCNGG 5 cut(s) 93, 166, 817, 1372, 1686
Bme18I GGWCC 1 cut(s) 156
BmgT120I GGNCC 2 cut(s) 156, 1534
BmiI GGNNCC 8 cut(s) 141, 157, 170, 821, 1035, 1149, 1429, 1464
BmrFI CCNGG 5 cut(s) 93, 166, 817, 1372, 1686
BmrI ACTGGG 1 cut(s) 472
BmsI GCATC 2 cut(s) 1880, 2174
BmuI ACTGGG 1 cut(s) 472
BpiI GAAGAC 2 cut(s) 1387, 2139
BpmI CTGGAG 2 cut(s) 917, 1202
Bpu10I CCTNAGC 3 cut(s) 1346, 1632, 2099
Bpu14I TTCGAA 2 cut(s) 1789, 2130
BpuEI CTTGAG 4 cut(s) 148, 401, 531, 2030
BpuMI CCSGG 3 cut(s) 166, 817, 1372
BsaAI YACGTR 1 cut(s) 1017
BsaHI GRCGYC 2 cut(s) 23, 594
BsaJI CCNNGG 6 cut(s) 92, 143, 405, 431, 823, 1771
BsaXI ACNNNNNCTCC 6 cut(s) 140, 170, 1018, 1048, 1404, 1434
Bsc4I CCNNNNNNNGG 4 cut(s) 149, 165, 231, 895
Bse1I ACTGG 5 cut(s) 467, 528, 784, 900, 960
Bse21I CCTNAGG 1 cut(s) 28
Bse3DI GCAATG 3 cut(s) 379, 1152, 1866
BseBI CCWGG 2 cut(s) 93, 1686
BseDI CCNNGG 6 cut(s) 92, 143, 405, 431, 823, 1771
BseGI GGATG 4 cut(s) 1781, 1845, 1851, 2085
BseLI CCNNNNNNNGG 4 cut(s) 149, 165, 231, 895
BseMI GCAATG 3 cut(s) 379, 1152, 1866
BseMII CTCAG 9 cut(s) 22, 198, 512, 934, 1001, 1320, 1337, 1623, 2090
BseNI ACTGG 5 cut(s) 467, 528, 784, 900, 960
BsePI GCGCGC 2 cut(s) 743, 745
BseRI GAGGAG 1 cut(s) 534
BseXI GCAGC 9 cut(s) 316, 943, 964, 967, 986, 995, 1655, 1998, 2174
Bsh1236I CGCG 2 cut(s) 745, 747
BshFI GGCC 4 cut(s) 1535, 1770, 1846, 2174
BsiHKAI GWGCWC 3 cut(s) 269, 535, 2105
BsiSI CCGG 3 cut(s) 166, 816, 1371
BslFI GGGAC 4 cut(s) 46, 423, 581, 1687
BslI CCNNNNNNNGG 4 cut(s) 149, 165, 231, 895
BsmAI GTCTC 3 cut(s) 546, 576, 1081
BsmFI GGGAC 4 cut(s) 46, 423, 581, 1687
BsmI GAATGC 1 cut(s) 1169
BsnI GGCC 4 cut(s) 1535, 1770, 1846, 2174
Bsp119I TTCGAA 2 cut(s) 1789, 2130
Bsp1286I GDGCHC 3 cut(s) 269, 535, 2105
Bsp143I GATC 9 cut(s) 4, 123, 139, 183, 668, 1462, 1587, 1660, 2122
Bsp19I CCATGG 2 cut(s) 143, 405
BspACI CCGC 7 cut(s) 153, 942, 1096, 1158, 1736, 1847, 2034
BspANI GGCC 4 cut(s) 1535, 1770, 1846, 2174
BspCNI CTCAG 9 cut(s) 21, 199, 513, 933, 1000, 1321, 1338, 1624, 2091
BspFNI CGCG 2 cut(s) 745, 747
BspHI TCATGA 1 cut(s) 261
BspLI GGNNCC 8 cut(s) 141, 157, 170, 821, 1035, 1149, 1429, 1464
BspMAI CTGCAG 3 cut(s) 976, 985, 1988
BspPI GGATC 7 cut(s) 12, 131, 134, 147, 191, 1457, 1470
BspT104I TTCGAA 2 cut(s) 1789, 2130
BsrBI CCGCTC 1 cut(s) 944
BsrDI GCAATG 3 cut(s) 379, 1152, 1866
BsrI ACTGG 5 cut(s) 467, 528, 784, 900, 960
BssECI CCNNGG 6 cut(s) 92, 143, 405, 431, 823, 1771
BssHII GCGCGC 2 cut(s) 743, 745
BssMI GATC 9 cut(s) 4, 123, 139, 183, 668, 1462, 1587, 1660, 2122
BssNI GRCGYC 2 cut(s) 23, 594
BssT1I CCWWGG 5 cut(s) 143, 405, 431, 823, 1771
Bst2UI CCWGG 2 cut(s) 93, 1686
Bst4CI ACNGT 9 cut(s) 103, 271, 851, 1132, 1246, 1393, 1420, 1569, 1884
Bst6I CTCTTC 1 cut(s) 419
BstACI GRCGYC 2 cut(s) 23, 594
BstAPI GCANNNNNTGC 2 cut(s) 761, 980
BstBAI YACGTR 1 cut(s) 1017
BstBI TTCGAA 2 cut(s) 1789, 2130
BstC8I GCNNGC 4 cut(s) 364, 741, 745, 747
BstDSI CCRYGG 2 cut(s) 143, 405
BstF5I GGATG 4 cut(s) 1781, 1845, 1851, 2085
BstFNI CGCG 2 cut(s) 745, 747
BstHHI GCGC 5 cut(s) 346, 745, 747, 749, 2023
BstKTI GATC 9 cut(s) 7, 126, 142, 186, 671, 1465, 1590, 1663, 2125
BstMAI GTCTC 3 cut(s) 546, 576, 1081
BstMBI GATC 9 cut(s) 4, 123, 139, 183, 668, 1462, 1587, 1660, 2122
BstMWI GCNNNNNNNGC 6 cut(s) 761, 980, 983, 1166, 1361, 2171
BstNI CCWGG 2 cut(s) 93, 1686
BstNSI RCATGY 2 cut(s) 512, 1001
BstSCI CCNGG 5 cut(s) 91, 164, 815, 1370, 1684
BstSFI CTRYAG 3 cut(s) 972, 981, 1984
BstUI CGCG 2 cut(s) 745, 747
BstV1I GCAGC 9 cut(s) 316, 943, 964, 967, 986, 995, 1655, 1998, 2174
BstV2I GAAGAC 2 cut(s) 1387, 2139
BstX2I RGATCY 4 cut(s) 4, 123, 139, 1462
BstYI RGATCY 4 cut(s) 4, 123, 139, 1462
Bsu36I CCTNAGG 1 cut(s) 28
BsuRI GGCC 4 cut(s) 1535, 1770, 1846, 2174
BtgI CCRYGG 2 cut(s) 143, 405
BtsCI GGATG 4 cut(s) 1781, 1845, 1851, 2085
BtsI GCAGTG 2 cut(s) 240, 2016
BtsIMutI CAGTG 9 cut(s) 99, 204, 240, 267, 535, 777, 1251, 1389, 2016
Cac8I GCNNGC 4 cut(s) 364, 741, 745, 747
CaiI CAGNNNCTG 2 cut(s) 329, 980
CciI TCATGA 1 cut(s) 261
CfoI GCGC 5 cut(s) 346, 745, 747, 749, 2023
Cfr13I GGNCC 2 cut(s) 156, 1534
CseI GACGC 2 cut(s) 368, 2144
CsiI ACCWGGT 1 cut(s) 1684
Csp6I GTAC 4 cut(s) 250, 1440, 1682, 1885
CviQI GTAC 4 cut(s) 250, 1440, 1682, 1885
DpnI GATC 9 cut(s) 6, 125, 141, 185, 670, 1464, 1589, 1662, 2124
DpnII GATC 9 cut(s) 4, 123, 139, 183, 668, 1462, 1587, 1660, 2122
EaeI YGGCCR 1 cut(s) 1844
Eam1104I CTCTTC 1 cut(s) 419
EarI CTCTTC 1 cut(s) 419
Ecl136II GAGCTC 1 cut(s) 2103
Eco130I CCWWGG 5 cut(s) 143, 405, 431, 823, 1771
Eco24I GRGCYC 1 cut(s) 2105
Eco47I GGWCC 1 cut(s) 156
Eco53kI GAGCTC 1 cut(s) 2103
Eco57I CTGAAG 3 cut(s) 771, 1211, 1559
Eco72I CACGTG 1 cut(s) 1017
Eco81I CCTNAGG 1 cut(s) 28
EcoICRI GAGCTC 1 cut(s) 2103
EcoRII CCWGG 2 cut(s) 91, 1684
EcoT14I CCWWGG 5 cut(s) 143, 405, 431, 823, 1771
EcoT38I GRGCYC 1 cut(s) 2105
ErhI CCWWGG 5 cut(s) 143, 405, 431, 823, 1771
FalI AAGNNNNNCTT 2 cut(s) 1351, 1383
FaqI GGGAC 4 cut(s) 46, 423, 581, 1687
FauI CCCGC 1 cut(s) 146
FbaI TGATCA 2 cut(s) 1587, 2122
FblI GTMKAC 3 cut(s) 237, 459, 846
FokI GGATG 4 cut(s) 1788, 1838, 1852, 2072
FriOI GRGCYC 1 cut(s) 2105
FspBI CTAG 9 cut(s) 294, 432, 449, 947, 1250, 1289, 1577, 1656, 1677
GlaI GCGC 5 cut(s) 345, 744, 746, 748, 2022
GsuI CTGGAG 2 cut(s) 917, 1202
HaeIII GGCC 4 cut(s) 1535, 1770, 1846, 2174
HapII CCGG 3 cut(s) 166, 816, 1371
HgaI GACGC 2 cut(s) 368, 2144
HhaI GCGC 5 cut(s) 346, 745, 747, 749, 2023
Hin1I GRCGYC 2 cut(s) 23, 594
Hin6I GCGC 5 cut(s) 344, 743, 745, 747, 2021
HinP1I GCGC 5 cut(s) 344, 743, 745, 747, 2021
HincII GTYRAC 4 cut(s) 238, 1012, 1049, 1480
HindII GTYRAC 4 cut(s) 238, 1012, 1049, 1480
HindIII AAGCTT 1 cut(s) 737
HinfI GANTC 9 cut(s) 118, 427, 629, 991, 1186, 1335, 1741, 1863, 2053
HpaII CCGG 3 cut(s) 166, 816, 1371
HphI GGTGA 7 cut(s) 709, 949, 979, 1516, 1648, 1700, 1927
Hpy188III TCNNGA 9 cut(s) 19, 84, 127, 262, 1037, 1181, 1447, 1456, 1562
Hpy99I CGWCG 1 cut(s) 362
HpyCH4III ACNGT 9 cut(s) 103, 271, 851, 1132, 1246, 1393, 1420, 1569, 1884
HpyCH4IV ACGT 6 cut(s) 23, 483, 594, 1016, 1812, 2148
HpyF10VI GCNNNNNNNGC 6 cut(s) 761, 980, 983, 1166, 1361, 2171
HpySE526I ACGT 6 cut(s) 23, 483, 594, 1016, 1812, 2148
Hsp92I GRCGYC 2 cut(s) 23, 594
HspAI GCGC 5 cut(s) 344, 743, 745, 747, 2021
Ksp22I TGATCA 2 cut(s) 1587, 2122
Kzo9I GATC 9 cut(s) 4, 123, 139, 183, 668, 1462, 1587, 1660, 2122
LmnI GCTCC 4 cut(s) 1039, 1738, 2065, 2108
Lsp1109I GCAGC 9 cut(s) 316, 943, 964, 967, 986, 995, 1655, 1998, 2174
LweI GCATC 2 cut(s) 1880, 2174
MabI ACCWGGT 1 cut(s) 1684
MaeI CTAG 9 cut(s) 294, 432, 449, 947, 1250, 1289, 1577, 1656, 1677
MaeII ACGT 6 cut(s) 23, 483, 594, 1016, 1812, 2148
MaeIII GTNAC 7 cut(s) 386, 475, 679, 967, 1024, 1414, 1891
MalI GATC 9 cut(s) 6, 125, 141, 185, 670, 1464, 1589, 1662, 2124
MbiI CCGCTC 1 cut(s) 944
MboI GATC 9 cut(s) 4, 123, 139, 183, 668, 1462, 1587, 1660, 2122
MfeI CAATTG 1 cut(s) 1707
MflI RGATCY 4 cut(s) 4, 123, 139, 1462
MhlI GDGCHC 3 cut(s) 269, 535, 2105
MlyI GAGTC 3 cut(s) 436, 985, 1857
MmeI TCCRAC 6 cut(s) 117, 540, 1531, 1597, 2035, 2169
MroXI GAANNNNTTC 4 cut(s) 1339, 1379, 1544, 1922
MseI TTAA 3 cut(s) 639, 876, 884
MslI CAYNNNNRTG 3 cut(s) 50, 245, 1529
MspA1I CMGCKG 2 cut(s) 977, 1738
MspI CCGG 3 cut(s) 166, 816, 1371
MspR9I CCNGG 5 cut(s) 93, 166, 817, 1372, 1686
MunI CAATTG 1 cut(s) 1707
Mva1269I GAATGC 1 cut(s) 1169
MvaI CCWGG 2 cut(s) 93, 1686
MvnI CGCG 2 cut(s) 745, 747
MwoI GCNNNNNNNGC 6 cut(s) 761, 980, 983, 1166, 1361, 2171
NciI CCSGG 3 cut(s) 166, 817, 1372
NcoI CCATGG 2 cut(s) 143, 405
NdeII GATC 9 cut(s) 4, 123, 139, 183, 668, 1462, 1587, 1660, 2122
NlaIV GGNNCC 8 cut(s) 141, 157, 170, 821, 1035, 1149, 1429, 1464
NmuCI GTSAC 5 cut(s) 386, 475, 679, 967, 1024
NspI RCATGY 2 cut(s) 512, 1001
NspV TTCGAA 2 cut(s) 1789, 2130
OliI CACNNNNGTG 2 cut(s) 245, 1529
PagI TCATGA 1 cut(s) 261
PauI GCGCGC 2 cut(s) 743, 745
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 1169
PdmI GAANNNNTTC 4 cut(s) 1339, 1379, 1544, 1922
PfeI GAWTC 6 cut(s) 118, 629, 1186, 1335, 1741, 2053
PfoI TCCNGGA 1 cut(s) 1370
PleI GAGTC 3 cut(s) 435, 985, 1857
PmaCI CACGTG 1 cut(s) 1017
PmlI CACGTG 1 cut(s) 1017
PpsI GAGTC 3 cut(s) 435, 985, 1857
Ppu21I YACGTR 1 cut(s) 1017
PshBI ATTAAT 1 cut(s) 876
Psp124BI GAGCTC 1 cut(s) 2105
Psp1406I AACGTT 1 cut(s) 2148
Psp6I CCWGG 2 cut(s) 91, 1684
PspCI CACGTG 1 cut(s) 1017
PspGI CCWGG 2 cut(s) 91, 1684
PspN4I GGNNCC 8 cut(s) 141, 157, 170, 821, 1035, 1149, 1429, 1464
PspPI GGNCC 2 cut(s) 156, 1534
PsrI GAACNNNNNNTAC 2 cut(s) 242, 274
PstI CTGCAG 3 cut(s) 976, 985, 1988
PstNI CAGNNNCTG 2 cut(s) 329, 980
PsuI RGATCY 4 cut(s) 4, 123, 139, 1462
PteI GCGCGC 2 cut(s) 743, 745
PvuII CAGCTG 1 cut(s) 977
RsaI GTAC 4 cut(s) 251, 1441, 1683, 1886
RsaNI GTAC 4 cut(s) 250, 1440, 1682, 1885
RseI CAYNNNNRTG 3 cut(s) 50, 245, 1529
SacI GAGCTC 1 cut(s) 2105
SalI GTCGAC 1 cut(s) 236
SaqAI TTAA 3 cut(s) 639, 876, 884
Sau3AI GATC 9 cut(s) 4, 123, 139, 183, 668, 1462, 1587, 1660, 2122
Sau96I GGNCC 2 cut(s) 156, 1534
SchI GAGTC 3 cut(s) 436, 985, 1857
ScrFI CCNGG 5 cut(s) 93, 166, 817, 1372, 1686
SduI GDGCHC 3 cut(s) 269, 535, 2105
SexAI ACCWGGT 1 cut(s) 1684
SfaNI GCATC 2 cut(s) 1880, 2174
SfcI CTRYAG 3 cut(s) 972, 981, 1984
SfuI TTCGAA 2 cut(s) 1789, 2130
SinI GGWCC 1 cut(s) 156
SmiMI CAYNNNNRTG 3 cut(s) 50, 245, 1529
SmlI CTYRAG 4 cut(s) 127, 416, 546, 2045
SmoI CTYRAG 4 cut(s) 127, 416, 546, 2045
SpeI ACTAGT 1 cut(s) 1576
SsiI CCGC 7 cut(s) 153, 942, 1096, 1158, 1736, 1847, 2034
SspMI CTAG 9 cut(s) 294, 432, 449, 947, 1250, 1289, 1577, 1656, 1677
SstI GAGCTC 1 cut(s) 2105
StyD4I CCNGG 5 cut(s) 91, 164, 815, 1370, 1684
StyI CCWWGG 5 cut(s) 143, 405, 431, 823, 1771
TaaI ACNGT 9 cut(s) 103, 271, 851, 1132, 1246, 1393, 1420, 1569, 1884
TaiI ACGT 6 cut(s) 26, 486, 597, 1019, 1815, 2151
TaqI TCGA 9 cut(s) 83, 237, 627, 770, 1455, 1789, 1861, 2130, 2153
TaqII GACCGA 1 cut(s) 1640
TatI WGTACW 2 cut(s) 249, 1439
TauI GCSGC 5 cut(s) 944, 1099, 1160, 1849, 2036
TfiI GAWTC 6 cut(s) 118, 629, 1186, 1335, 1741, 2053
Tru1I TTAA 3 cut(s) 639, 876, 884
Tru9I TTAA 3 cut(s) 639, 876, 884
TscAI CASTG 9 cut(s) 106, 211, 247, 274, 535, 784, 1251, 1396, 2023
TseFI GTSAC 5 cut(s) 386, 475, 679, 967, 1024
TseI GCWGC 9 cut(s) 329, 931, 974, 977, 980, 983, 1643, 1986, 2162
Tsp45I GTSAC 5 cut(s) 386, 475, 679, 967, 1024
TspDTI ATGAA 5 cut(s) 250, 894, 1839, 1969, 2074
TspGWI ACGGA 2 cut(s) 214, 1194
TspRI CASTG 9 cut(s) 106, 211, 247, 274, 535, 784, 1251, 1396, 2023
VpaK11BI GGWCC 1 cut(s) 156
VspI ATTAAT 1 cut(s) 876
XapI RAATTY 3 cut(s) 705, 1922, 1994
XceI RCATGY 2 cut(s) 512, 1001
XmaJI CCTAGG 1 cut(s) 431
XmiI GTMKAC 3 cut(s) 237, 459, 846
XmnI GAANNNNTTC 4 cut(s) 1339, 1379, 1544, 1922
XspI CTAG 9 cut(s) 294, 432, 449, 947, 1250, 1289, 1577, 1656, 1677
ZraI GACGTC 2 cut(s) 24, 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.