Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0011925

Physical Location & Seq

Genomic Coordinates Reverse (-)

27203034 .. 27206227

Gene Structure 3194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g25910.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGACCTCGCGTCGTTCTTGACGTCCTTGGGGACCTCCTTCCTCATATTTGTGGCTCTGATGCTTTTGTTCTCATGGCTTTCGAGAAAGCCTGGAAACACTGTGATTTACTATCCGAATCGGATCTTGAGAGGGTTGGATCCATGGGAGGGCGGGTCCATGACCCGGAACCCATTTGCTTGGATCAAGGAGGCTCTGTCTTCCACCGAGCAGGAAGTTATATCCATGTCAGGGGTCGACACTGCTGTGTACTTCGTGTTCTTGAGCACTGTGTTGGGTATATTGGTTTTGTCTAGCCTTGTTCTGCTACCGATTCTTCTGCCAGTTGCTGCCACCGAAGTCGGGCAGAAGTTAACCAACGCAACCATAAGCAATGGCACTTTCAGTGACCTTGACAAGTTATCCATGGGACATCTCAAGGAGAAGAGTCCTAGGTTGTGGGCATTTCTCTTGGGTGTCTACTGGGTTTCTTTCGTCACGTATTTCTTGCTGTGGAAGGCATATAAACATGCCTCCAACCTGAGAGCCACTGCTTTAATGTCTCCTCAAGCGAAGCCTGAACAATTTGCCATTCTTGTCAGAGACATACCTAACTCCCTCGAAGGTCAAATTAGGAAGGAACAGGTCGATTCTTATTTCAAGACCGTCTACCCTGATACATTTTATAGATCATTGGTTGTCACAGACAACAAAGAGGTGGACAAAATTTGGGAAGAGTTGGAAGGGTTTAAGAAGAAGCTTGTACGCGCTGAAGCAGTCTATGCATTATCGAAGAAAACTGGCAACTCAGAAGGAATAAGACCCACTAACAAAACCGGTTTCCTTGGTCTTTGTGGGGCAAAAGTAGACAGTATTGAGTACTACACGGAGAAGATTAATGAATTAACCCCAAAACTGGAGGCTGAACAGAAAGCCACTCTCAGAGAGAAGCAGCAAAATGCCGCTCTAGTTTTTTTCACCAGTAGGGTGACTGCAGCTGCTGCAGCTCAGACTCTACATGCCCAACTTGTTGACACATGGACAGTCACCGATGCTCCTGAGCCTCGTCAAGTACTTTGGCCTAGTCTCAAAATCAAGTTTTTTCAGAGACAGGTGCGGCAGAATGTTGTGTATATCATCGTGGCTCTGACTGTAGTGTTTTATATGATTCCAATTGCTGCCATCTCTGCATTCACAACTCTGGACAACCTGAAGAAACTTCTTCCATTTCTAAAGCCAATTTTGAAGCAAGATGCGATTAGGACAGTGCTGGAGGCTTATCTACCTCAAATTGCACTCATAGTCTTTCTGGCTATGTTGCCAAAGTTCCTGCTGTTTTTGTCCAAGGCTGAGGGAATTCCTTCCCAGAGCCATGCAATAAGGGCTGCTTCCGGGAAATACTTCTACTTCACTATCTTCAATGTTTTTCTTGGAGTTACGGTAGGTGGAACCTTATTCAGTACATTCAAGACCATCGAGAAGGATCCTAACTCTCTTGTTGACTTACTCGCAACTAGCCTCCCTGCCAATGCAACTTACTTCCTCACCTTTGTGGCCCTAAAGTTTTTCGTTGGATATGGTCTTGAACTGTCCCGACTAGTTCCTCTGATCATTTTCCATATAAAGAGGAAGTACCTCTGTAAGACCGAAGCTGAGGTGAAAGCAGCTTGGCTTCCCAGTGATCTTGGATACGGGACTAGAGTACCTAGTGATCTGCTCATCATTACGATTGTCCTCTGCTACTCTGTTATTGCTCCACTGATTCTTCCATTTGGTGTGCTGTACTTTGGCCTTGGATGGCTTATCCTTCGAAATCAGGCACTCAAAGTTTATATTCCAGCATACGAAAGCTATGGAAGGATGTGGCCGCACATGCAAATTCGAATCATTGCATCTCTGATATTGTACCAAGTTACCATGTTTGGTTACTTTGGGGTGAAGAGATTCTACTATGCACCATTCTTAATTCCACTTCCTATCATGTCCTTGCTTTTCAGTTTCATCTGCAGCAAGAAATTCTACCGGTTTTTCCAACACACCGCGCTTGAAGTAGCTGCACACGAACTCAAGGAAATTCCGAACATGGAGCAAGTTTACAGAGCTTTCATCCCACCAAGCCTGAGCTCCGAGAAGATAGACGATGATCAATTTGAAGACGCTCAATCTAGTGTTTCGAGAACAGCCTCGTTCGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0030054 GO:0031090 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

725

Amino Acids

81.75

Weight (kDa)

9.27

Isoelectric Point (pI)

32.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30360
fragaria_vesca	FvH4_3g04980 FvH4_3g04980
malus_domestica	MD05G1278500.v1.1 MD10G1257300.v1.1
prunus_persica	Prupe.4G086300_v2.0.a1
pyrus_communis	pycom05g25910 pycom10g21280 pycom10g21310 pycom10g21330
rosa_chinensis	RchiOBHm_Chr5g0015001
rosa_laevigata	RLG00000032159
rosa_multiflora	Rmu_sc0004889.1_g000022
rosa_roxburghii	Rroxscaffold_1G00061540
rosa_rugosa	Rorug05G0022600 Rorug05G0022700
rosa_samantha	Rh5AG117900 Rh5BG115100
rosa_wichuraiana	Rw5G010160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	26
AccBSI	CCGCTC	1 cut(s)	944
AccI	GTMKAC	4 cut(s)	237, 459, 648, 846
AccII	CGCG	3 cut(s)	11, 747, 2021
AciI	CCGC	5 cut(s)	153, 942, 1096, 1847, 2019
AclWI	GGATC	6 cut(s)	131, 134, 147, 191, 1457, 1470
AcoI	YGGCCR	1 cut(s)	1844
AcsI	RAATTY	5 cut(s)	705, 1335, 1857, 1994, 2052
AcuI	CTGAAG	2 cut(s)	771, 1211
AcyI	GRCGYC	1 cut(s)	23
AfaI	GTAC	9 cut(s)	251, 744, 860, 1053, 1441, 1613, 1683, 1763, 1886
AfiI	CCNNNNNNNGG	5 cut(s)	149, 165, 231, 342, 895
AgeI	ACCGGT	2 cut(s)	815, 2001
AgsI	TTSAA	7 cut(s)	640, 1225, 1399, 1447, 1565, 2027, 2132
AhdI	GACNNNNNGTC	1 cut(s)	10
AhlI	ACTAGT	1 cut(s)	1576
AjnI	CCWGG	1 cut(s)	91
AleI	CACNNNNGTG	2 cut(s)	245, 1529
AluBI	AGCT	9 cut(s)	739, 977, 986, 1631, 1646, 1830, 2033, 2081, 2103
AluI	AGCT	9 cut(s)	739, 977, 986, 1631, 1646, 1830, 2033, 2081, 2103
Alw21I	GWGCWC	2 cut(s)	269, 2105
Alw26I	GTCTC	4 cut(s)	546, 576, 1070, 1081
AlwI	GGATC	6 cut(s)	131, 134, 147, 191, 1457, 1470
AlwNI	CAGNNNCTG	2 cut(s)	329, 980
AoxI	GGCC	4 cut(s)	1058, 1533, 1768, 1844
ApoI	RAATTY	5 cut(s)	705, 1335, 1857, 1994, 2052
AseI	ATTAAT	1 cut(s)	876
AsiGI	ACCGGT	2 cut(s)	815, 2001
Asp700I	GAANNNNTTC	3 cut(s)	1339, 1379, 1922
AspA2I	CCTAGG	1 cut(s)	431
AspLEI	GCGC	2 cut(s)	749, 2023
AspS9I	GGNCC	4 cut(s)	4, 33, 156, 1534
AsuC2I	CCSGG	2 cut(s)	166, 1372
AsuHPI	GGTGA	6 cut(s)	949, 979, 1018, 1516, 1648, 1927
AsuII	TTCGAA	2 cut(s)	1789, 1861
AvaII	GGWCC	3 cut(s)	4, 33, 156
AvrII	CCTAGG	1 cut(s)	431
BaeI	ACNNNNGTAYC	2 cut(s)	1665, 1698
BamHI	GGATCC	2 cut(s)	139, 1462
BanII	GRGCYC	1 cut(s)	2105
BarI	GAAGNNNNNNTAC	2 cut(s)	1910, 1942
BbsI	GAAGAC	2 cut(s)	192, 2139
Bbv12I	GWGCWC	2 cut(s)	269, 2105
BbvCI	CCTCAGC	2 cut(s)	1329, 1632
BccI	CCATC	3 cut(s)	1169, 1460, 1770
BcgI	CGANNNNNNTGC	2 cut(s)	301, 335
BciT130I	CCWGG	1 cut(s)	93
BciVI	GTATCC	1 cut(s)	1661
BclI	TGATCA	2 cut(s)	1587, 2122
BcnI	CCSGG	2 cut(s)	166, 1372
BcoDI	GTCTC	4 cut(s)	546, 576, 1070, 1081
BcuI	ACTAGT	1 cut(s)	1576
BfaI	CTAG	9 cut(s)	294, 432, 947, 1062, 1494, 1577, 1677, 1686, 2145
BfmI	CTRYAG	4 cut(s)	972, 981, 1131, 1984
BfuI	GTATCC	1 cut(s)	1661
BlnI	CCTAGG	1 cut(s)	431
BmcAI	AGTACT	2 cut(s)	860, 1053
Bme1390I	CCNGG	3 cut(s)	93, 166, 1372
Bme18I	GGWCC	3 cut(s)	4, 33, 156
BmeRI	GACNNNNNGTC	1 cut(s)	10
BmgT120I	GGNCC	4 cut(s)	4, 33, 156, 1534
BmiI	GGNNCC	6 cut(s)	34, 141, 157, 170, 1429, 1464
BmrFI	CCNGG	3 cut(s)	93, 166, 1372
BmrI	ACTGGG	2 cut(s)	472, 1650
BmsI	GCATC	4 cut(s)	51, 1021, 1222, 1880
BmuI	ACTGGG	2 cut(s)	472, 1650
BpiI	GAAGAC	2 cut(s)	192, 2139
BpmI	CTGGAG	2 cut(s)	917, 1271
Bpu10I	CCTNAGC	4 cut(s)	1038, 1329, 1632, 2099
Bpu14I	TTCGAA	2 cut(s)	1789, 1861
BpuEI	CTTGAG	5 cut(s)	148, 283, 401, 531, 2030
BpuMI	CCSGG	2 cut(s)	166, 1372
BsaAI	YACGTR	1 cut(s)	480
BsaHI	GRCGYC	1 cut(s)	23
BsaJI	CCNNGG	7 cut(s)	27, 143, 405, 431, 823, 1323, 1771
BsaWI	WCCGGW	2 cut(s)	815, 2001
BsaXI	ACNNNNNCTCC	8 cut(s)	140, 170, 182, 212, 1018, 1048, 1404, 1434
Bsc4I	CCNNNNNNNGG	5 cut(s)	149, 165, 231, 342, 895
Bse118I	RCCGGY	2 cut(s)	815, 2001
Bse1I	ACTGG	6 cut(s)	323, 467, 784, 900, 960, 1656
Bse3DI	GCAATG	2 cut(s)	379, 1866
BseBI	CCWGG	1 cut(s)	93
BseDI	CCNNGG	7 cut(s)	27, 143, 405, 431, 823, 1323, 1771
BseGI	GGATG	3 cut(s)	1781, 1845, 2085
BseLI	CCNNNNNNNGG	5 cut(s)	149, 165, 231, 342, 895
BseMI	GCAATG	2 cut(s)	379, 1866
BseMII	CTCAG	8 cut(s)	512, 801, 934, 1001, 1029, 1320, 1623, 2090
BseNI	ACTGG	6 cut(s)	323, 467, 784, 900, 960, 1656
BseRI	GAGGAG	1 cut(s)	534
BsgI	GTGCAG	1 cut(s)	2019
Bsh1236I	CGCG	3 cut(s)	11, 747, 2021
BshFI	GGCC	4 cut(s)	1060, 1535, 1770, 1846
BshTI	ACCGGT	2 cut(s)	815, 2001
BsiHKAI	GWGCWC	2 cut(s)	269, 2105
BsiSI	CCGG	4 cut(s)	166, 816, 1371, 2002
BslFI	GGGAC	4 cut(s)	46, 423, 1555, 1687
BslI	CCNNNNNNNGG	5 cut(s)	149, 165, 231, 342, 895
BsmAI	GTCTC	4 cut(s)	546, 576, 1070, 1081
BsmFI	GGGAC	4 cut(s)	46, 423, 1555, 1687
BsmI	GAATGC	1 cut(s)	1169
BsnI	GGCC	4 cut(s)	1060, 1535, 1770, 1846
Bsp119I	TTCGAA	2 cut(s)	1789, 1861
Bsp1286I	GDGCHC	2 cut(s)	269, 2105
Bsp143I	GATC	9 cut(s)	123, 139, 183, 668, 1462, 1587, 1660, 1690, 2122
Bsp19I	CCATGG	2 cut(s)	143, 405
BspACI	CCGC	5 cut(s)	153, 942, 1096, 1847, 2019
BspANI	GGCC	4 cut(s)	1060, 1535, 1770, 1846
BspCNI	CTCAG	8 cut(s)	513, 800, 933, 1000, 1030, 1321, 1624, 2091
BspFNI	CGCG	3 cut(s)	11, 747, 2021
BspLI	GGNNCC	6 cut(s)	34, 141, 157, 170, 1429, 1464
BspMAI	CTGCAG	3 cut(s)	976, 985, 1988
BspPI	GGATC	6 cut(s)	131, 134, 147, 191, 1457, 1470
BspT104I	TTCGAA	2 cut(s)	1789, 1861
BsrBI	CCGCTC	1 cut(s)	944
BsrDI	GCAATG	2 cut(s)	379, 1866
BsrFI	RCCGGY	2 cut(s)	815, 2001
BsrI	ACTGG	6 cut(s)	323, 467, 784, 900, 960, 1656
BssAI	RCCGGY	2 cut(s)	815, 2001
BssECI	CCNNGG	7 cut(s)	27, 143, 405, 431, 823, 1323, 1771
BssMI	GATC	9 cut(s)	123, 139, 183, 668, 1462, 1587, 1660, 1690, 2122
BssNI	GRCGYC	1 cut(s)	23
BssT1I	CCWWGG	7 cut(s)	27, 143, 405, 431, 823, 1323, 1771
Bst2UI	CCWGG	1 cut(s)	93
Bst4CI	ACNGT	9 cut(s)	103, 271, 646, 851, 1024, 1132, 1246, 1420, 1569
Bst6I	CTCTTC	3 cut(s)	419, 708, 1913
BstACI	GRCGYC	1 cut(s)	23
BstAPI	GCANNNNNTGC	2 cut(s)	761, 980
BstBAI	YACGTR	1 cut(s)	480
BstBI	TTCGAA	2 cut(s)	1789, 1861
BstDEI	CTNAG	8 cut(s)	521, 787, 920, 987, 1038, 1329, 1632, 2099
BstDSI	CCRYGG	2 cut(s)	143, 405
BstF5I	GGATG	3 cut(s)	1781, 1845, 2085
BstFNI	CGCG	3 cut(s)	11, 747, 2021
BstHHI	GCGC	2 cut(s)	749, 2023
BstKTI	GATC	9 cut(s)	126, 142, 186, 671, 1465, 1590, 1663, 1693, 2125
BstMAI	GTCTC	4 cut(s)	546, 576, 1070, 1081
BstMBI	GATC	9 cut(s)	123, 139, 183, 668, 1462, 1587, 1660, 1690, 2122
BstMWI	GCNNNNNNNGC	7 cut(s)	761, 980, 983, 1166, 1361, 1852, 2168
BstNI	CCWGG	1 cut(s)	93
BstNSI	RCATGY	3 cut(s)	512, 1001, 1855
BstSCI	CCNGG	3 cut(s)	91, 164, 1370
BstSFI	CTRYAG	4 cut(s)	972, 981, 1131, 1984
BstUI	CGCG	3 cut(s)	11, 747, 2021
BstV2I	GAAGAC	2 cut(s)	192, 2139
BstX2I	RGATCY	3 cut(s)	123, 139, 1462
BstXI	CCANNNNNNTGG	1 cut(s)	180
BstYI	RGATCY	3 cut(s)	123, 139, 1462
BsuI	GTATCC	1 cut(s)	1661
BsuRI	GGCC	4 cut(s)	1060, 1535, 1770, 1846
BtgI	CCRYGG	2 cut(s)	143, 405
BtsCI	GGATG	3 cut(s)	1781, 1845, 2085
BtsI	GCAGTG	2 cut(s)	240, 528
BtsIMutI	CAGTG	8 cut(s)	99, 240, 267, 391, 528, 1251, 1663, 1736
CaiI	CAGNNNCTG	2 cut(s)	329, 980
CfoI	GCGC	2 cut(s)	749, 2023
Cfr10I	RCCGGY	2 cut(s)	815, 2001
Cfr13I	GGNCC	4 cut(s)	4, 33, 156, 1534
CseI	GACGC	1 cut(s)	2144
Csp6I	GTAC	9 cut(s)	250, 743, 859, 1052, 1440, 1612, 1682, 1762, 1885
CspAI	ACCGGT	2 cut(s)	815, 2001
CviQI	GTAC	9 cut(s)	250, 743, 859, 1052, 1440, 1612, 1682, 1762, 1885
DdeI	CTNAG	8 cut(s)	521, 787, 920, 987, 1038, 1329, 1632, 2099
DpnI	GATC	9 cut(s)	125, 141, 185, 670, 1464, 1589, 1662, 1692, 2124
DpnII	GATC	9 cut(s)	123, 139, 183, 668, 1462, 1587, 1660, 1690, 2122
DriI	GACNNNNNGTC	1 cut(s)	10
EaeI	YGGCCR	1 cut(s)	1844
Eam1104I	CTCTTC	3 cut(s)	419, 708, 1913
Eam1105I	GACNNNNNGTC	1 cut(s)	10
EarI	CTCTTC	3 cut(s)	419, 708, 1913
Ecl136II	GAGCTC	1 cut(s)	2103
Eco130I	CCWWGG	7 cut(s)	27, 143, 405, 431, 823, 1323, 1771
Eco24I	GRGCYC	1 cut(s)	2105
Eco47I	GGWCC	3 cut(s)	4, 33, 156
Eco53kI	GAGCTC	1 cut(s)	2103
Eco57I	CTGAAG	2 cut(s)	771, 1211
EcoICRI	GAGCTC	1 cut(s)	2103
EcoO109I	RGGNCCY	1 cut(s)	33
EcoRI	GAATTC	1 cut(s)	1335
EcoRII	CCWGG	1 cut(s)	91
EcoT14I	CCWWGG	7 cut(s)	27, 143, 405, 431, 823, 1323, 1771
EcoT22I	ATGCAT	1 cut(s)	766
EcoT38I	GRGCYC	1 cut(s)	2105
ErhI	CCWWGG	7 cut(s)	27, 143, 405, 431, 823, 1323, 1771
FalI	AAGNNNNNCTT	2 cut(s)	1351, 1383
FaqI	GGGAC	4 cut(s)	46, 423, 1555, 1687
FauI	CCCGC	1 cut(s)	146
FbaI	TGATCA	2 cut(s)	1587, 2122
FblI	GTMKAC	4 cut(s)	237, 459, 648, 846
FokI	GGATG	3 cut(s)	1788, 1852, 2072
FriOI	GRGCYC	1 cut(s)	2105
FspBI	CTAG	9 cut(s)	294, 432, 947, 1062, 1494, 1577, 1677, 1686, 2145
GlaI	GCGC	2 cut(s)	748, 2022
GsuI	CTGGAG	2 cut(s)	917, 1271
HaeIII	GGCC	4 cut(s)	1060, 1535, 1770, 1846
HapII	CCGG	4 cut(s)	166, 816, 1371, 2002
HgaI	GACGC	1 cut(s)	2144
HhaI	GCGC	2 cut(s)	749, 2023
Hin1I	GRCGYC	1 cut(s)	23
Hin6I	GCGC	2 cut(s)	747, 2021
HinP1I	GCGC	2 cut(s)	747, 2021
HincII	GTYRAC	4 cut(s)	238, 354, 1012, 1480
HindII	GTYRAC	4 cut(s)	238, 354, 1012, 1480
HindIII	AAGCTT	1 cut(s)	737
HinfI	GANTC	9 cut(s)	118, 313, 427, 629, 991, 1147, 1741, 1863, 1923
HpaI	GTTAAC	1 cut(s)	354
HpaII	CCGG	4 cut(s)	166, 816, 1371, 2002
HphI	GGTGA	6 cut(s)	949, 979, 1018, 1516, 1648, 1927
Hpy99I	CGWCG	1 cut(s)	16
HpyCH4III	ACNGT	9 cut(s)	103, 271, 646, 851, 1024, 1132, 1246, 1420, 1569
HpyCH4IV	ACGT	2 cut(s)	23, 479
HpyF10VI	GCNNNNNNNGC	7 cut(s)	761, 980, 983, 1166, 1361, 1852, 2168
HpyF3I	CTNAG	8 cut(s)	521, 787, 920, 987, 1038, 1329, 1632, 2099
HpySE526I	ACGT	2 cut(s)	23, 479
Hsp92I	GRCGYC	1 cut(s)	23
HspAI	GCGC	2 cut(s)	747, 2021
Ksp22I	TGATCA	2 cut(s)	1587, 2122
KspAI	GTTAAC	1 cut(s)	354
Kzo9I	GATC	9 cut(s)	123, 139, 183, 668, 1462, 1587, 1660, 1690, 2122
LmnI	GCTCC	4 cut(s)	1039, 1738, 2065, 2108
LweI	GCATC	4 cut(s)	51, 1021, 1222, 1880
MaeI	CTAG	9 cut(s)	294, 432, 947, 1062, 1494, 1577, 1677, 1686, 2145
MaeII	ACGT	2 cut(s)	23, 479
MaeIII	GTNAC	8 cut(s)	386, 475, 679, 967, 1024, 1414, 1891, 1904
MalI	GATC	9 cut(s)	125, 141, 185, 670, 1464, 1589, 1662, 1692, 2124
MbiI	CCGCTC	1 cut(s)	944
MboI	GATC	9 cut(s)	123, 139, 183, 668, 1462, 1587, 1660, 1690, 2122
MfeI	CAATTG	1 cut(s)	1152
MflI	RGATCY	3 cut(s)	123, 139, 1462
MhlI	GDGCHC	2 cut(s)	269, 2105
MlyI	GAGTC	2 cut(s)	436, 985
MmeI	TCCRAC	5 cut(s)	117, 540, 699, 1531, 2035
Mph1103I	ATGCAT	1 cut(s)	766
MroXI	GAANNNNTTC	3 cut(s)	1339, 1379, 1922
MseI	TTAA	6 cut(s)	353, 536, 729, 876, 884, 1943
MslI	CAYNNNNRTG	3 cut(s)	50, 245, 1529
MspA1I	CMGCKG	1 cut(s)	977
MspI	CCGG	4 cut(s)	166, 816, 1371, 2002
MspR9I	CCNGG	3 cut(s)	93, 166, 1372
MunI	CAATTG	1 cut(s)	1152
Mva1269I	GAATGC	1 cut(s)	1169
MvaI	CCWGG	1 cut(s)	93
MvnI	CGCG	3 cut(s)	11, 747, 2021
MwoI	GCNNNNNNNGC	7 cut(s)	761, 980, 983, 1166, 1361, 1852, 2168
NciI	CCSGG	2 cut(s)	166, 1372
NcoI	CCATGG	2 cut(s)	143, 405
NdeII	GATC	9 cut(s)	123, 139, 183, 668, 1462, 1587, 1660, 1690, 2122
NlaIV	GGNNCC	6 cut(s)	34, 141, 157, 170, 1429, 1464
NmuCI	GTSAC	5 cut(s)	386, 475, 679, 967, 1024
NsiI	ATGCAT	1 cut(s)	766
NspI	RCATGY	3 cut(s)	512, 1001, 1855
NspV	TTCGAA	2 cut(s)	1789, 1861
OliI	CACNNNNGTG	2 cut(s)	245, 1529
PcsI	WCGNNNNNNNCGW	1 cut(s)	20
PctI	GAATGC	1 cut(s)	1169
PdmI	GAANNNNTTC	3 cut(s)	1339, 1379, 1922
PfeI	GAWTC	7 cut(s)	118, 313, 629, 1147, 1741, 1863, 1923
PfoI	TCCNGGA	1 cut(s)	1370
PinAI	ACCGGT	2 cut(s)	815, 2001
PleI	GAGTC	2 cut(s)	435, 985
PpsI	GAGTC	2 cut(s)	435, 985
Ppu21I	YACGTR	1 cut(s)	480
PpuMI	RGGWCCY	1 cut(s)	33
PshBI	ATTAAT	1 cut(s)	876
Psp124BI	GAGCTC	1 cut(s)	2105
Psp5II	RGGWCCY	1 cut(s)	33
Psp6I	CCWGG	1 cut(s)	91
PspGI	CCWGG	1 cut(s)	91
PspN4I	GGNNCC	6 cut(s)	34, 141, 157, 170, 1429, 1464
PspPI	GGNCC	4 cut(s)	4, 33, 156, 1534
PspPPI	RGGWCCY	1 cut(s)	33
PsrI	GAACNNNNNNTAC	2 cut(s)	242, 274
PstI	CTGCAG	3 cut(s)	976, 985, 1988
PstNI	CAGNNNCTG	2 cut(s)	329, 980
PsuI	RGATCY	3 cut(s)	123, 139, 1462
PvuII	CAGCTG	1 cut(s)	977
RsaI	GTAC	9 cut(s)	251, 744, 860, 1053, 1441, 1613, 1683, 1763, 1886
RsaNI	GTAC	9 cut(s)	250, 743, 859, 1052, 1440, 1612, 1682, 1762, 1885
RseI	CAYNNNNRTG	3 cut(s)	50, 245, 1529
SacI	GAGCTC	1 cut(s)	2105
SalI	GTCGAC	1 cut(s)	236
SaqAI	TTAA	6 cut(s)	353, 536, 729, 876, 884, 1943
Sau3AI	GATC	9 cut(s)	123, 139, 183, 668, 1462, 1587, 1660, 1690, 2122
Sau96I	GGNCC	4 cut(s)	4, 33, 156, 1534
ScaI	AGTACT	2 cut(s)	860, 1053
SchI	GAGTC	2 cut(s)	436, 985
ScrFI	CCNGG	3 cut(s)	93, 166, 1372
SduI	GDGCHC	2 cut(s)	269, 2105
SfaNI	GCATC	4 cut(s)	51, 1021, 1222, 1880
SfcI	CTRYAG	4 cut(s)	972, 981, 1131, 1984
SfuI	TTCGAA	2 cut(s)	1789, 1861
SinI	GGWCC	3 cut(s)	4, 33, 156
SmiMI	CAYNNNNRTG	3 cut(s)	50, 245, 1529
SmlI	CTYRAG	5 cut(s)	127, 262, 416, 546, 2045
SmoI	CTYRAG	5 cut(s)	127, 262, 416, 546, 2045
SpeI	ACTAGT	1 cut(s)	1576
SsiI	CCGC	5 cut(s)	153, 942, 1096, 1847, 2019
SspMI	CTAG	9 cut(s)	294, 432, 947, 1062, 1494, 1577, 1677, 1686, 2145
SstI	GAGCTC	1 cut(s)	2105
StyD4I	CCNGG	3 cut(s)	91, 164, 1370
StyI	CCWWGG	7 cut(s)	27, 143, 405, 431, 823, 1323, 1771
TaaI	ACNGT	9 cut(s)	103, 271, 646, 851, 1024, 1132, 1246, 1420, 1569
TaiI	ACGT	2 cut(s)	26, 482
TaqI	TCGA	9 cut(s)	83, 237, 600, 627, 770, 1455, 1789, 1861, 2153
TaqII	GACCGA	1 cut(s)	1640
TatI	WGTACW	5 cut(s)	249, 858, 1051, 1439, 1761
TauI	GCSGC	3 cut(s)	944, 1099, 1849
TfiI	GAWTC	7 cut(s)	118, 313, 629, 1147, 1741, 1863, 1923
Tru1I	TTAA	6 cut(s)	353, 536, 729, 876, 884, 1943
Tru9I	TTAA	6 cut(s)	353, 536, 729, 876, 884, 1943
TscAI	CASTG	8 cut(s)	106, 247, 274, 391, 535, 1251, 1663, 1743
TseFI	GTSAC	5 cut(s)	386, 475, 679, 967, 1024
Tsp45I	GTSAC	5 cut(s)	386, 475, 679, 967, 1024
TspDTI	ATGAA	3 cut(s)	894, 1969, 2074
TspGWI	ACGGA	1 cut(s)	881
TspRI	CASTG	8 cut(s)	106, 247, 274, 391, 535, 1251, 1663, 1743
VpaK11BI	GGWCC	3 cut(s)	4, 33, 156
VspI	ATTAAT	1 cut(s)	876
XapI	RAATTY	5 cut(s)	705, 1335, 1857, 1994, 2052
XceI	RCATGY	3 cut(s)	512, 1001, 1855
XmaJI	CCTAGG	1 cut(s)	431
XmiI	GTMKAC	4 cut(s)	237, 459, 648, 846
XmnI	GAANNNNTTC	3 cut(s)	1339, 1379, 1922
XspI	CTAG	9 cut(s)	294, 432, 947, 1062, 1494, 1577, 1677, 1686, 2145
ZraI	GACGTC	1 cut(s)	24
ZrmI	AGTACT	2 cut(s)	860, 1053
Zsp2I	ATGCAT	1 cut(s)	766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.