pycom10g21310

CSC1-like protein ERD4

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0011925
Physical Location & Seq
Reverse (-)
23976552 .. 23980651
4100 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g21310.3

Sequence Viewer

Length: 2202 bp
ATGGATCTCTCTTCGTTCTTGACGTCCTTAGGGACTTCCTTCCTCATATTTGTGGTTCTGATGTTTTTGTTTGCATGGCTTTCGAGAAAGCCTGGGAACGCTGTAGTTTACTATCCGAATCGGATCTCGAGACGGTTGGATCCTTGGGAGGGCGGGTCCATGACCCGGAACCCGTTTGCATCGATCAAAGAGGCTCTGTATTCCACTGAGCAGGAAGTTATTTCCATGTCAGGGGTCGACACTGCTGTGTACTTTGTGTTCTTGAGCACTGTGTTGGGTATATTGGTTTTATCTAGCATTGTTCTGCTACCAATTCTTCTGCCAGTTGCTACCACCGAAGAAGTGACGAAGTTAACCAATATAACCGTAAGCAATGGCACTTATAGTGACCTTGACAAGTTATCCATGGGACATCTCAAGGAGATGAGTTCTAGGTTGTGGGCATTTCTATTTGGTGTCTACTGGGTTTCTTTCGTCACATATTTCTTTCTGTGGAAGGCATGTAAACATGCCTCCGACCTGAGAGCCAGTGCTTTAATGTCTCCTCAAGCGAAGCCTGAACAATTTGCCGTTCTTGTCAGAGACATACCTAACGCCCCCGAAGGTCAAACTATAGGGGAACAGGTCGATTCTTATTTTAAGACCGTCTACCCTGATACATTTTACAGATCGTTGGTTGTCACAGACAACAAAGAGGTGAACAAAATTTGGGAAGAGTTAGAAGGGTGTAAGAAAAAGCTTGCGCACGCTGAAGCAGTTTATGCACTATCGAAGAAAACTGGCAACTCAGAAGGAACAAAACCCACTAACAAAACTGGGTTCCTTGGTCTATGTGGGGAAAAAGTAGACAGTATTGAGTACTACACTGAGAAGATTAATGAATTAACCACGAAACTCGAGGCTGAACAGGAAATCACTCTCAAAGATAAGCAGCAAAATGCCGCGCTAGTTTTTTTCACCAGTAGGGTGACTGCAGCTGCTGCAGCTCAGACTCTACATGCCCAACTTGTTGACACATGGACCGTCACAGATGCTCCTGAACCTCGTCAACTACTTTGGCGTAACCTCAAAATCAAGTTTTTTCAGAGACAGGTGCGGCAGTATGTTGTGTACATCATTGTGGCTCTGACCGTATTATTTTTTATGGTTCCAATTGCTTTTATCTCTGCATTCACAACCCTGGACAATCTGAAGAAACTTCTTCCGTTTCTAAAGCCAATTTTGAAGCAAGAGGCGATTAAGACAGTGCTAGAGGCTTATCTACCTCAAATTGCACTCTTACTCTTTCTAGCTTTCTTGCCAAAGTTCCTTCTGTTTTTGTCTAAGGCTGAGGGAATCCCTTCCCAGAGCCATGCAGTAAGGGCTACTTCCGGGAAATACTTCTACTTCATTATCTTCAATGTTTTTCTTGGAGTTACGGTGGGTGGAACCTTATTCAGTACATTGAAGACAATCCAGAAGAATCCTAACTGTCTCGTTGACTTACTCGCAACTAGCCTCCCCGCCAATTCAACTTACTTCCTCACCTTTGTGGCCCTGAAGTTTTTCGTTGGATATGGTCTTGAACTGTCCCGACTGGTTCCTCTGATCATTTTCCATATAAAGAGGAAGTATTTCTGTAAGTCCGAAGATGAGGTGAAAGCAGCTTGGCTTCCTCGTGGTCTTGGATATGGGACTAGAGTACCCAGTGATATGCTCATGATTACAATTGTCCTCTGCTACTCCGTTATTGCTCCGCTGATTCTTCCATTTGGTGTGCTTTACTTTGGCCTTGGATGGCTTGTCCTTCGAAATCAGGCACTCAAAGTTTACATTCCATCGTATGAAAGCTATGGAAGGATGTGGCCGCACATCCAAGTTCGACTCATTGCATCTCTGATACTGTACCAAGTTACCATGTTTGGTTACTTTGGGGTGAAGAAATTCTACTATGCACCATTCTTACTTCCACTTCCTGTCGTGTCATTGCTTTTTAGTTTCATCTGCAGCAAGAAATTCTACCATTTTTTCCAACACACTGCGCTTGAAGTTGCTGCCCACGAACTCAAGGAGATTCCTAACATGGAGCAAGTTTACAGAGCTTTCATCCCACCAAGCCTGAGCTCCAAGAAGCTAGACGATGATCTATGCGAAGACGCTGCACCGGACAGAATCGTTGGCCAAATTAGTGAAACTGTGGAGTCTCATGATCTGTTCCCATAA

Protein Analysis

734

Amino Acids

82.93

Weight (kDa)

8.87

Isoelectric Point (pI)

33.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011925)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30360
fragaria_vesca FvH4_3g04980 FvH4_3g04980
malus_domestica MD05G1278500.v1.1 MD10G1257300.v1.1
prunus_persica Prupe.4G086300_v2.0.a1
pyrus_communis pycom05g25910 pycom10g21280 pycom10g21310 pycom10g21330
rosa_chinensis RchiOBHm_Chr5g0015001
rosa_laevigata RLG00000032159
rosa_multiflora Rmu_sc0004889.1_g000022
rosa_roxburghii Rroxscaffold_1G00061540
rosa_rugosa Rorug05G0022600 Rorug05G0022700
rosa_samantha Rh5AG117900 Rh5BG115100
rosa_wichuraiana Rw5G010160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 26
Acc16I TGCGCA 1 cut(s) 744
AccI GTMKAC 4 cut(s) 237, 459, 648, 846
AccII CGCG 1 cut(s) 944
AciI CCGC 6 cut(s) 153, 942, 1096, 1503, 1736, 1847
AclWI GGATC 4 cut(s) 12, 131, 134, 147
AcoI YGGCCR 2 cut(s) 1844, 2158
AcsI RAATTY 3 cut(s) 705, 1922, 1994
AcuI CTGAAG 3 cut(s) 771, 1211, 1559
AcyI GRCGYC 1 cut(s) 23
AfaI GTAC 6 cut(s) 251, 860, 1112, 1441, 1683, 1886
AfiI CCNNNNNNNGG 3 cut(s) 149, 165, 231
AgsI TTSAA 6 cut(s) 1225, 1399, 1447, 1512, 1565, 2027
AjnI CCWGG 2 cut(s) 91, 1179
AleI CACNNNNGTG 2 cut(s) 245, 1529
AluBI AGCT 9 cut(s) 739, 977, 986, 1292, 1646, 1830, 2081, 2103, 2113
AluI AGCT 9 cut(s) 739, 977, 986, 1292, 1646, 1830, 2081, 2103, 2113
Alw21I GWGCWC 2 cut(s) 269, 2105
Alw26I GTCTC 6 cut(s) 124, 546, 576, 1081, 1478, 2187
AlwI GGATC 4 cut(s) 12, 131, 134, 147
AlwNI CAGNNNCTG 1 cut(s) 980
Ama87I CYCGRG 2 cut(s) 127, 896
AoxI GGCC 4 cut(s) 1533, 1768, 1844, 2158
ApeKI GCWGC 9 cut(s) 931, 974, 977, 980, 983, 1643, 1986, 2033, 2138
ApoI RAATTY 3 cut(s) 705, 1922, 1994
AseI ATTAAT 1 cut(s) 876
Asp700I GAANNNNTTC 5 cut(s) 1339, 1379, 1544, 1613, 1922
AspLEI GCGC 3 cut(s) 745, 946, 2023
AspS9I GGNCC 3 cut(s) 156, 1020, 1534
AsuC2I CCSGG 2 cut(s) 166, 1372
AsuHPI GGTGA 6 cut(s) 709, 949, 979, 1516, 1648, 1927
AsuII TTCGAA 1 cut(s) 1789
AvaI CYCGRG 2 cut(s) 127, 896
AvaII GGWCC 2 cut(s) 156, 1020
AxyI CCTNAGG 1 cut(s) 28
BaeI ACNNNNGTAYC 2 cut(s) 1665, 1698
BalI TGGCCA 1 cut(s) 2160
BamHI GGATCC 1 cut(s) 139
BanII GRGCYC 1 cut(s) 2105
BarI GAAGNNNNNNTAC 2 cut(s) 1910, 1942
BauI CACGAG 1 cut(s) 1656
BbsI GAAGAC 2 cut(s) 1454, 2139
Bbv12I GWGCWC 2 cut(s) 269, 2105
BbvCI CCTCAGC 1 cut(s) 1329
BbvI GCAGC 9 cut(s) 943, 964, 967, 986, 995, 1655, 1998, 2020, 2125
BccI CCATC 2 cut(s) 1770, 1825
BceAI ACGGC 1 cut(s) 554
BcgI CGANNNNNNTGC 4 cut(s) 63, 97, 2120, 2154
BciT130I CCWGG 2 cut(s) 93, 1181
BclI TGATCA 1 cut(s) 1587
BcnI CCSGG 2 cut(s) 166, 1372
BcoDI GTCTC 6 cut(s) 124, 546, 576, 1081, 1478, 2187
BfaI CTAG 8 cut(s) 294, 432, 947, 1250, 1289, 1494, 1677, 2114
BfmI CTRYAG 5 cut(s) 102, 612, 972, 981, 1984
BmcAI AGTACT 1 cut(s) 860
Bme1390I CCNGG 4 cut(s) 93, 166, 1181, 1372
Bme18I GGWCC 2 cut(s) 156, 1020
BmeT110I CYCGRG 2 cut(s) 127, 896
BmgT120I GGNCC 3 cut(s) 156, 1020, 1534
BmiI GGNNCC 7 cut(s) 141, 157, 170, 821, 1149, 1429, 1581
BmrFI CCNGG 4 cut(s) 93, 166, 1181, 1372
BmrI ACTGGG 3 cut(s) 472, 825, 1680
BmsI GCATC 3 cut(s) 188, 1021, 1880
BmuI ACTGGG 3 cut(s) 472, 825, 1680
BpiI GAAGAC 2 cut(s) 1454, 2139
Bpu10I CCTNAGC 2 cut(s) 1329, 2099
Bpu14I TTCGAA 1 cut(s) 1789
BpuEI CTTGAG 4 cut(s) 283, 401, 531, 2030
BpuMI CCSGG 2 cut(s) 166, 1372
Bsa29I ATCGAT 1 cut(s) 182
BsaHI GRCGYC 1 cut(s) 23
BsaJI CCNNGG 6 cut(s) 92, 143, 405, 823, 1179, 1771
BsaWI WCCGGW 1 cut(s) 2143
BsaXI ACNNNNNCTCC 6 cut(s) 140, 170, 1018, 1048, 1404, 1434
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 165, 231
Bse1I ACTGG 8 cut(s) 323, 467, 528, 784, 820, 960, 1581, 1686
Bse21I CCTNAGG 1 cut(s) 28
Bse3DI GCAATG 3 cut(s) 379, 1866, 1964
BseBI CCWGG 2 cut(s) 93, 1181
BseCI ATCGAT 1 cut(s) 182
BseDI CCNNGG 6 cut(s) 92, 143, 405, 823, 1179, 1771
BseGI GGATG 4 cut(s) 1781, 1845, 1851, 2085
BseLI CCNNNNNNNGG 3 cut(s) 149, 165, 231
BseMI GCAATG 3 cut(s) 379, 1866, 1964
BseMII CTCAG 7 cut(s) 198, 512, 801, 858, 1001, 1320, 2090
BseNI ACTGG 8 cut(s) 323, 467, 528, 784, 820, 960, 1581, 1686
BseRI GAGGAG 1 cut(s) 534
BseXI GCAGC 9 cut(s) 943, 964, 967, 986, 995, 1655, 1998, 2020, 2125
BsgI GTGCAG 1 cut(s) 2124
Bsh1236I CGCG 1 cut(s) 944
BshFI GGCC 4 cut(s) 1535, 1770, 1846, 2160
BshVI ATCGAT 1 cut(s) 182
BsiHKAI GWGCWC 2 cut(s) 269, 2105
BsiHKCI CYCGRG 2 cut(s) 127, 896
BsiSI CCGG 3 cut(s) 166, 1371, 2144
BslFI GGGAC 4 cut(s) 46, 423, 1555, 1687
BslI CCNNNNNNNGG 3 cut(s) 149, 165, 231
BsmAI GTCTC 6 cut(s) 124, 546, 576, 1081, 1478, 2187
BsmBI CGTCTC 1 cut(s) 124
BsmFI GGGAC 4 cut(s) 46, 423, 1555, 1687
BsmI GAATGC 1 cut(s) 1169
BsnI GGCC 4 cut(s) 1535, 1770, 1846, 2160
BsoBI CYCGRG 2 cut(s) 127, 896
Bsp119I TTCGAA 1 cut(s) 1789
Bsp1286I GDGCHC 2 cut(s) 269, 2105
Bsp1407I TGTACA 1 cut(s) 1110
Bsp143I GATC 8 cut(s) 4, 123, 139, 183, 668, 1587, 2122, 2188
Bsp19I CCATGG 1 cut(s) 405
BspACI CCGC 6 cut(s) 153, 942, 1096, 1503, 1736, 1847
BspANI GGCC 4 cut(s) 1535, 1770, 1846, 2160
BspCNI CTCAG 7 cut(s) 199, 513, 800, 859, 1000, 1321, 2091
BspDI ATCGAT 1 cut(s) 182
BspFNI CGCG 1 cut(s) 944
BspHI TCATGA 2 cut(s) 1698, 2185
BspLI GGNNCC 7 cut(s) 141, 157, 170, 821, 1149, 1429, 1581
BspMAI CTGCAG 3 cut(s) 976, 985, 1988
BspPI GGATC 4 cut(s) 12, 131, 134, 147
BspT104I TTCGAA 1 cut(s) 1789
BsrDI GCAATG 3 cut(s) 379, 1866, 1964
BsrGI TGTACA 1 cut(s) 1110
BsrI ACTGG 8 cut(s) 323, 467, 528, 784, 820, 960, 1581, 1686
BssECI CCNNGG 6 cut(s) 92, 143, 405, 823, 1179, 1771
BssMI GATC 8 cut(s) 4, 123, 139, 183, 668, 1587, 2122, 2188
BssNI GRCGYC 1 cut(s) 23
BssSI CACGAG 1 cut(s) 1656
BssT1I CCWWGG 4 cut(s) 143, 405, 823, 1771
Bst2BI CACGAG 1 cut(s) 1656
Bst2UI CCWGG 2 cut(s) 93, 1181
Bst6I CTCTTC 2 cut(s) 16, 708
BstACI GRCGYC 1 cut(s) 23
BstAPI GCANNNNNTGC 2 cut(s) 761, 980
BstAUI TGTACA 1 cut(s) 1110
BstBI TTCGAA 1 cut(s) 1789
BstC8I GCNNGC 2 cut(s) 741, 747
BstDEI CTNAG 9 cut(s) 28, 207, 521, 787, 867, 987, 1323, 1329, 2099
BstDSI CCRYGG 1 cut(s) 405
BstF5I GGATG 4 cut(s) 1781, 1845, 1851, 2085
BstFNI CGCG 1 cut(s) 944
BstHHI GCGC 3 cut(s) 745, 946, 2023
BstKTI GATC 8 cut(s) 7, 126, 142, 186, 671, 1590, 2125, 2191
BstMAI GTCTC 6 cut(s) 124, 546, 576, 1081, 1478, 2187
BstMBI GATC 8 cut(s) 4, 123, 139, 183, 668, 1587, 2122, 2188
BstMWI GCNNNNNNNGC 4 cut(s) 761, 980, 983, 1361
BstNI CCWGG 2 cut(s) 93, 1181
BstNSI RCATGY 3 cut(s) 504, 512, 1001
BstSCI CCNGG 4 cut(s) 91, 164, 1179, 1370
BstSFI CTRYAG 5 cut(s) 102, 612, 972, 981, 1984
BstUI CGCG 1 cut(s) 944
BstV1I GCAGC 9 cut(s) 943, 964, 967, 986, 995, 1655, 1998, 2020, 2125
BstV2I GAAGAC 2 cut(s) 1454, 2139
BstX2I RGATCY 3 cut(s) 4, 123, 139
BstYI RGATCY 3 cut(s) 4, 123, 139
Bsu15I ATCGAT 1 cut(s) 182
Bsu36I CCTNAGG 1 cut(s) 28
BsuRI GGCC 4 cut(s) 1535, 1770, 1846, 2160
BsuTUI ATCGAT 1 cut(s) 182
BtgI CCRYGG 1 cut(s) 405
BtsCI GGATG 4 cut(s) 1781, 1845, 1851, 2085
BtsI GCAGTG 2 cut(s) 240, 2016
BtsIMutI CAGTG 8 cut(s) 204, 240, 267, 535, 864, 1251, 1693, 2016
Cac8I GCNNGC 2 cut(s) 741, 747
CaiI CAGNNNCTG 1 cut(s) 980
CciI TCATGA 2 cut(s) 1698, 2185
CfoI GCGC 3 cut(s) 745, 946, 2023
Cfr13I GGNCC 3 cut(s) 156, 1020, 1534
ClaI ATCGAT 1 cut(s) 182
CseI GACGC 1 cut(s) 2144
Csp6I GTAC 6 cut(s) 250, 859, 1111, 1440, 1682, 1885
CviQI GTAC 6 cut(s) 250, 859, 1111, 1440, 1682, 1885
DdeI CTNAG 9 cut(s) 28, 207, 521, 787, 867, 987, 1323, 1329, 2099
DpnI GATC 8 cut(s) 6, 125, 141, 185, 670, 1589, 2124, 2190
DpnII GATC 8 cut(s) 4, 123, 139, 183, 668, 1587, 2122, 2188
EaeI YGGCCR 2 cut(s) 1844, 2158
Eam1104I CTCTTC 2 cut(s) 16, 708
EarI CTCTTC 2 cut(s) 16, 708
Ecl136II GAGCTC 1 cut(s) 2103
Eco130I CCWWGG 4 cut(s) 143, 405, 823, 1771
Eco24I GRGCYC 1 cut(s) 2105
Eco47I GGWCC 2 cut(s) 156, 1020
Eco53kI GAGCTC 1 cut(s) 2103
Eco57I CTGAAG 3 cut(s) 771, 1211, 1559
Eco81I CCTNAGG 1 cut(s) 28
Eco88I CYCGRG 2 cut(s) 127, 896
EcoICRI GAGCTC 1 cut(s) 2103
EcoRII CCWGG 2 cut(s) 91, 1179
EcoT14I CCWWGG 4 cut(s) 143, 405, 823, 1771
EcoT38I GRGCYC 1 cut(s) 2105
ErhI CCWWGG 4 cut(s) 143, 405, 823, 1771
Esp3I CGTCTC 1 cut(s) 124
FalI AAGNNNNNCTT 2 cut(s) 1351, 1383
FaqI GGGAC 4 cut(s) 46, 423, 1555, 1687
FauI CCCGC 2 cut(s) 146, 1510
FbaI TGATCA 1 cut(s) 1587
FblI GTMKAC 4 cut(s) 237, 459, 648, 846
FokI GGATG 4 cut(s) 1788, 1838, 1852, 2072
FriOI GRGCYC 1 cut(s) 2105
FspBI CTAG 8 cut(s) 294, 432, 947, 1250, 1289, 1494, 1677, 2114
FspI TGCGCA 1 cut(s) 744
GlaI GCGC 3 cut(s) 744, 945, 2022
HaeIII GGCC 4 cut(s) 1535, 1770, 1846, 2160
HapII CCGG 3 cut(s) 166, 1371, 2144
HgaI GACGC 1 cut(s) 2144
HhaI GCGC 3 cut(s) 745, 946, 2023
Hin1I GRCGYC 1 cut(s) 23
Hin6I GCGC 3 cut(s) 743, 944, 2021
HinP1I GCGC 3 cut(s) 743, 944, 2021
HincII GTYRAC 5 cut(s) 238, 354, 1012, 1049, 1480
HindII GTYRAC 5 cut(s) 238, 354, 1012, 1049, 1480
HindIII AAGCTT 1 cut(s) 737
HpaI GTTAAC 1 cut(s) 354
HpaII CCGG 3 cut(s) 166, 1371, 2144
HphI GGTGA 6 cut(s) 709, 949, 979, 1516, 1648, 1927
HpyAV CCTTC 9 cut(s) 49, 490, 596, 716, 785, 1319, 1350, 1796, 1830
HpyCH4IV ACGT 1 cut(s) 23
HpyF10VI GCNNNNNNNGC 4 cut(s) 761, 980, 983, 1361
HpyF3I CTNAG 9 cut(s) 28, 207, 521, 787, 867, 987, 1323, 1329, 2099
HpySE526I ACGT 1 cut(s) 23
Hsp92I GRCGYC 1 cut(s) 23
HspAI GCGC 3 cut(s) 743, 944, 2021
Ksp22I TGATCA 1 cut(s) 1587
KspAI GTTAAC 1 cut(s) 354
Kzo9I GATC 8 cut(s) 4, 123, 139, 183, 668, 1587, 2122, 2188
LmnI GCTCC 4 cut(s) 1039, 1738, 2065, 2108
Lsp1109I GCAGC 9 cut(s) 943, 964, 967, 986, 995, 1655, 1998, 2020, 2125
LweI GCATC 3 cut(s) 188, 1021, 1880
MaeI CTAG 8 cut(s) 294, 432, 947, 1250, 1289, 1494, 1677, 2114
MaeII ACGT 1 cut(s) 23
MalI GATC 8 cut(s) 6, 125, 141, 185, 670, 1589, 2124, 2190
MboI GATC 8 cut(s) 4, 123, 139, 183, 668, 1587, 2122, 2188
MfeI CAATTG 2 cut(s) 1152, 1707
MflI RGATCY 3 cut(s) 4, 123, 139
MhlI GDGCHC 2 cut(s) 269, 2105
MlsI TGGCCA 1 cut(s) 2160
MluNI TGGCCA 1 cut(s) 2160
MlyI GAGTC 3 cut(s) 985, 1857, 2189
MmeI TCCRAC 4 cut(s) 117, 540, 1531, 2035
Mox20I TGGCCA 1 cut(s) 2160
MroXI GAANNNNTTC 5 cut(s) 1339, 1379, 1544, 1613, 1922
MscI TGGCCA 1 cut(s) 2160
MseI TTAA 6 cut(s) 353, 536, 639, 876, 884, 1239
MslI CAYNNNNRTG 4 cut(s) 50, 245, 1118, 1529
Msp20I TGGCCA 1 cut(s) 2160
MspA1I CMGCKG 2 cut(s) 977, 1738
MspI CCGG 3 cut(s) 166, 1371, 2144
MspR9I CCNGG 4 cut(s) 93, 166, 1181, 1372
MunI CAATTG 2 cut(s) 1152, 1707
Mva1269I GAATGC 1 cut(s) 1169
MvaI CCWGG 2 cut(s) 93, 1181
MvnI CGCG 1 cut(s) 944
MwoI GCNNNNNNNGC 4 cut(s) 761, 980, 983, 1361
NciI CCSGG 2 cut(s) 166, 1372
NcoI CCATGG 1 cut(s) 405
NdeII GATC 8 cut(s) 4, 123, 139, 183, 668, 1587, 2122, 2188
NlaIV GGNNCC 7 cut(s) 141, 157, 170, 821, 1149, 1429, 1581
NmuCI GTSAC 6 cut(s) 343, 386, 475, 679, 967, 1024
NsbI TGCGCA 1 cut(s) 744
NspI RCATGY 3 cut(s) 504, 512, 1001
NspV TTCGAA 1 cut(s) 1789
OliI CACNNNNGTG 2 cut(s) 245, 1529
PaeR7I CTCGAG 2 cut(s) 127, 896
PagI TCATGA 2 cut(s) 1698, 2185
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 1169
PdmI GAANNNNTTC 5 cut(s) 1339, 1379, 1544, 1613, 1922
PfeI GAWTC 7 cut(s) 118, 629, 1335, 1462, 1741, 2053, 2151
PfoI TCCNGGA 1 cut(s) 1370
PleI GAGTC 3 cut(s) 985, 1857, 2188
PpsI GAGTC 3 cut(s) 985, 1857, 2188
PshBI ATTAAT 1 cut(s) 876
Psp124BI GAGCTC 1 cut(s) 2105
Psp6I CCWGG 2 cut(s) 91, 1179
PspGI CCWGG 2 cut(s) 91, 1179
PspN4I GGNNCC 7 cut(s) 141, 157, 170, 821, 1149, 1429, 1581
PspPI GGNCC 3 cut(s) 156, 1020, 1534
PspXI VCTCGAGB 1 cut(s) 896
PsrI GAACNNNNNNTAC 2 cut(s) 242, 274
PstI CTGCAG 3 cut(s) 976, 985, 1988
PstNI CAGNNNCTG 1 cut(s) 980
PsuI RGATCY 3 cut(s) 4, 123, 139
PvuII CAGCTG 1 cut(s) 977
RsaI GTAC 6 cut(s) 251, 860, 1112, 1441, 1683, 1886
RsaNI GTAC 6 cut(s) 250, 859, 1111, 1440, 1682, 1885
RseI CAYNNNNRTG 4 cut(s) 50, 245, 1118, 1529
SacI GAGCTC 1 cut(s) 2105
SalI GTCGAC 1 cut(s) 236
SaqAI TTAA 6 cut(s) 353, 536, 639, 876, 884, 1239
Sau3AI GATC 8 cut(s) 4, 123, 139, 183, 668, 1587, 2122, 2188
Sau96I GGNCC 3 cut(s) 156, 1020, 1534
ScaI AGTACT 1 cut(s) 860
SchI GAGTC 3 cut(s) 985, 1857, 2189
ScrFI CCNGG 4 cut(s) 93, 166, 1181, 1372
SduI GDGCHC 2 cut(s) 269, 2105
SfaNI GCATC 3 cut(s) 188, 1021, 1880
SfcI CTRYAG 5 cut(s) 102, 612, 972, 981, 1984
Sfr274I CTCGAG 2 cut(s) 127, 896
SfuI TTCGAA 1 cut(s) 1789
SinI GGWCC 2 cut(s) 156, 1020
SlaI CTCGAG 2 cut(s) 127, 896
SmiMI CAYNNNNRTG 4 cut(s) 50, 245, 1118, 1529
SmlI CTYRAG 6 cut(s) 127, 262, 416, 546, 896, 2045
SmoI CTYRAG 6 cut(s) 127, 262, 416, 546, 896, 2045
SsiI CCGC 6 cut(s) 153, 942, 1096, 1503, 1736, 1847
SspMI CTAG 8 cut(s) 294, 432, 947, 1250, 1289, 1494, 1677, 2114
SstI GAGCTC 1 cut(s) 2105
StyD4I CCNGG 4 cut(s) 91, 164, 1179, 1370
StyI CCWWGG 4 cut(s) 143, 405, 823, 1771
TaiI ACGT 1 cut(s) 26
TaqI TCGA 9 cut(s) 83, 128, 182, 237, 627, 770, 897, 1789, 1861
TatI WGTACW 4 cut(s) 249, 858, 1110, 1439
TauI GCSGC 3 cut(s) 944, 1099, 1849
TfiI GAWTC 7 cut(s) 118, 629, 1335, 1462, 1741, 2053, 2151
Tru1I TTAA 6 cut(s) 353, 536, 639, 876, 884, 1239
Tru9I TTAA 6 cut(s) 353, 536, 639, 876, 884, 1239
TscAI CASTG 8 cut(s) 211, 247, 274, 535, 871, 1251, 1693, 2023
TseFI GTSAC 6 cut(s) 343, 386, 475, 679, 967, 1024
TseI GCWGC 9 cut(s) 931, 974, 977, 980, 983, 1643, 1986, 2033, 2138
Tsp45I GTSAC 6 cut(s) 343, 386, 475, 679, 967, 1024
TspDTI ATGAA 5 cut(s) 894, 1378, 1839, 1969, 2074
TspGWI ACGGA 2 cut(s) 1194, 1714
TspRI CASTG 8 cut(s) 211, 247, 274, 535, 871, 1251, 1693, 2023
VpaK11BI GGWCC 2 cut(s) 156, 1020
VspI ATTAAT 1 cut(s) 876
XapI RAATTY 3 cut(s) 705, 1922, 1994
XceI RCATGY 3 cut(s) 504, 512, 1001
XhoI CTCGAG 2 cut(s) 127, 896
XmiI GTMKAC 4 cut(s) 237, 459, 648, 846
XmnI GAANNNNTTC 5 cut(s) 1339, 1379, 1544, 1613, 1922
XspI CTAG 8 cut(s) 294, 432, 947, 1250, 1289, 1494, 1677, 2114
ZraI GACGTC 1 cut(s) 24
ZrmI AGTACT 1 cut(s) 860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.