Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0011925

Physical Location & Seq

Genomic Coordinates Reverse (-)

83636862 .. 83641831

Gene Structure 4970 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00061540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGATCTCAGTTCGTTCTTGACATCGTTAGGGACCTCGTTTGCGATATTTGTGATTCTGATGTTTCTGTTCGCGTGGCTTTCAACAAAGCCCGGGAACGCGGTGGTGTACTATCCGAATCGGATCCTCAAGGGTATGGATCCGTGGGAGGGCGGGTCCAAGACCCGGAACCCGTTTGCCTGGATCAAAGAGGCTCTGAATTCCACAGAGCAGGAAGTTATAGCCATTTCTGGGGTTGACACTGCTGTCTACTTTGTCTTCTTAAGCACTGTGTTGGGAATACTGGTTTTGTCCAGCTTGATACTGCTACCAATGCTTCTGCCAGTTTCTGCCACTGACACTGGAGACACCACAACAAACACCACCACCAGCAATGGGACTTTCTCTGACCTTGACAAGTTATCCATAGGAAATGTCCAGGCGAAGAGTCCAAGGCTGTGGGCGTTTCTCCTAGGTGTCTACTGGGTTTCTTTTGTTACATATATCTTGTTGTGGAAGGCGTATAAACATGTCTCCGATCTGAGAGCCAATGCTTTAATGTCTCCTGATGTCAAGCCTGAACAATTTGCTATTCTTGTTAGAGACATACCTGCTGTGCCTGAAGGTCCAAATAGAAAGGACCAGGTTGATTCATATTTCAGGGCCATCTACCCCGAGACCTATTACAAATCACTGATTGTTACAGACAATAAAGAGGTGAACAAACTTTGGAAAGAGTTAGAAGGGTTTAGGAAGAAGCTTGAACGTGCTGAAGCAGTTTATGCAGCATCCAAAACAACAGGCAGTCCAGAAGGAACAAGACCCACTAACAAAACTGGCTTCCTTGGTCTTTGTGGGGCAAAGGTTGATAGTATAGAGTACTACACTAAGAAGATTAATGAAACAATCCCAAAATTGGAAGCTGAACAAAAAGCCACTCTCAGAGAGAAGCAGCTAAATGCTGCTATAGTTTTCTTCACTAGTAGGGTGGCTGCAGCTTCTGCAGCACAAAGTCTACATGCCCAAATGGGTGACAAATGGACAGTCACGGATGCTCCTGAACCTCGTCAAGTTCTTTGGCCTAATCTCAAAATCAAGTTTTTCCAAAGGCAAGTGCGGCAGTATGTTGTGTATATCATTGTGGCTCTGACCGTGGTGTTTTATATGATCCCAATTGCATTCATCTCTGCATTCACAACTCTGGATAATCTGGTGAAATTTATCCCATTTATCAAGCCAGTTGTGCATCAATCTGCGCTCAAGACGGTGCTGGAGGCATTTCTTCCTCAGCTTGCACTTATAATCTTCTTAGCTTTGTTGCCAAAGCTACTTTTCGCTCTGTCTAAAGCCGAGGGAATTCCTTCTCAGAGCCATGCAGTACGGTCTGCCTCTGGAAAATATTTCTATTTCACTGTGTTCAATGTTTTTCTTGGAGTTACTTTAGGTGGAACGTTGTTCAGTACATTCAAGGAAATCGAGAAGGATCCCAATTTCAATAAAATTGTTACCTTACTGGCAACTAGCCTCCCAGGAAGTGCAACTTACTTCGTCACCTTTGTGGCTCTGAAGTTTTTTATTGGCTATGGTCTTGAACTATCCCGATTAGTTCCTCTGATCATTTTCCATCTGAAAAGGAAGTATCTTTGTAAGACTGAAGGCGAGTTGAAAGCAGCTTGGCAACCTAGTGATCTGGGGTATGGGACTAGAGTTCCTGGTGATTTGCTCATCATAACAGTTGTTCTCTGCTACTCTGTCATTGCTCCACTGATCATTCCATTTGGTGTGCTGTACTTTGGCATCGGATGGCTTGTCCTTCGAAACCAGGCACTCAAAGTGTATTGTCCAGCGTATGAAAGTTATGGAAGGTTCTGGCCACACATGCAGGTCCGGATTCTTGCAGCTCTGCTATTGTACCAAGTTACCATGCTTGGTTTCTTTGGGGTAAAGAAATTTGTATATGCACCGTTTGTGATCCCACTTCCTATCCTCTCCTTGATCTTCTGTTACGTCTGTAGCAAGAAATTCTACCGATTTTTCAAAGACGCTTCTCTTGAAGCTGCGTCTCACGAACTGAAAGACATTCCTAACATGGAGCAAATTTATAAATCTTACCTCCCACCAAGCCTGAGCTCTGAGAAAGTACTACTAGATGATGATCAATTCGAAGATGCCAAGTCAAATGTGTCCCGAACAACATCATTTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0030054 GO:0031090 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

728

Amino Acids

81.7

Weight (kDa)

9.23

Isoelectric Point (pI)

29.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RSN1_TM	PF13967	5 - 166	1.3e-34	Late exocytosis, associated with Golgi transport
PHM7_cyt	PF14703	188 - 355	1.3e-38	Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM	PF02714	366 - 639	1.7e-78	Calcium-dependent channel, 7TM region, putative phosphate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30360
fragaria_vesca	FvH4_3g04980 FvH4_3g04980
malus_domestica	MD05G1278500.v1.1 MD10G1257300.v1.1
prunus_persica	Prupe.4G086300_v2.0.a1
pyrus_communis	pycom05g25910 pycom10g21280 pycom10g21310 pycom10g21330
rosa_chinensis	RchiOBHm_Chr5g0015001
rosa_laevigata	RLG00000032159
rosa_multiflora	Rmu_sc0004889.1_g000022
rosa_roxburghii	Rroxscaffold_1G00061540
rosa_rugosa	Rorug05G0022600 Rorug05G0022700
rosa_samantha	Rh5AG117900 Rh5BG115100
rosa_wichuraiana	Rw5G010160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1280, 2082
AasI	GACNNNNNNGTC	1 cut(s)	245
Acc36I	ACCTGC	2 cut(s)	598, 1852
AccI	GTMKAC	3 cut(s)	249, 459, 994
AccII	CGCG	2 cut(s)	74, 101
AccIII	TCCGGA	1 cut(s)	1866
AciI	CCGC	3 cut(s)	101, 153, 1096
AclI	AACGTT	1 cut(s)	1430
AcoI	YGGCCR	1 cut(s)	1850
AcsI	RAATTY	6 cut(s)	199, 1196, 1335, 1928, 2000, 2076
AcuI	CTGAAG	4 cut(s)	621, 771, 1565, 1653
AfaI	GTAC	7 cut(s)	110, 860, 1359, 1441, 1769, 1892, 2121
AfiI	CCNNNNNNNGG	5 cut(s)	149, 165, 231, 375, 895
AflII	CTTAAG	1 cut(s)	262
AflIII	ACRYGT	1 cut(s)	508
AgsI	TTSAA	9 cut(s)	84, 743, 1399, 1447, 1474, 1571, 1645, 2017, 2033
AhlI	ACTAGT	1 cut(s)	959
AjnI	CCWGG	6 cut(s)	179, 417, 621, 1507, 1690, 1800
AleI	CACNNNNGTG	1 cut(s)	1535
Alw21I	GWGCWC	1 cut(s)	2111
Alw26I	GTCTC	6 cut(s)	339, 517, 546, 576, 650, 2046
AlwNI	CAGNNNCTG	2 cut(s)	329, 980
Ama87I	CYCGRG	2 cut(s)	92, 653
Aor13HI	TCCGGA	1 cut(s)	1866
AoxI	GGCC	3 cut(s)	642, 1058, 1850
ApeKI	GCWGC	9 cut(s)	764, 931, 941, 971, 974, 983, 1649, 1877, 2036
ApoI	RAATTY	6 cut(s)	199, 1196, 1335, 1928, 2000, 2076
ArsI	GACNNNNNNTTYG	2 cut(s)	1008, 1040
AseI	ATTAAT	1 cut(s)	876
Asp700I	GAANNNNTTC	1 cut(s)	1339
AspA2I	CCTAGG	1 cut(s)	451
AspLEI	GCGC	1 cut(s)	1237
AspS9I	GGNCC	6 cut(s)	33, 156, 605, 619, 642, 1864
AsuC2I	CCSGG	3 cut(s)	93, 94, 166
AsuHPI	GGTGA	5 cut(s)	709, 1022, 1204, 1522, 1706
AsuII	TTCGAA	2 cut(s)	1795, 2142
AvaI	CYCGRG	2 cut(s)	92, 653
AvaII	GGWCC	5 cut(s)	33, 156, 605, 619, 1864
AvrII	CCTAGG	1 cut(s)	451
BalI	TGGCCA	1 cut(s)	1852
BamHI	GGATCC	3 cut(s)	123, 139, 1462
BanII	GRGCYC	1 cut(s)	2111
BbsI	GAAGAC	1 cut(s)	250
Bbv12I	GWGCWC	1 cut(s)	2111
BbvCI	CCTCAGC	1 cut(s)	1266
BbvI	GCAGC	9 cut(s)	776, 928, 943, 958, 986, 995, 1661, 1889, 2023
BccI	CCATC	3 cut(s)	653, 1611, 1776
BciT130I	CCWGG	6 cut(s)	181, 419, 623, 1509, 1692, 1802
BclI	TGATCA	3 cut(s)	1593, 1746, 2134
BcnI	CCSGG	3 cut(s)	93, 94, 166
BcoDI	GTCTC	6 cut(s)	339, 517, 546, 576, 650, 2046
BcuI	ACTAGT	1 cut(s)	959
BfaI	CTAG	6 cut(s)	452, 960, 1500, 1662, 1683, 2126
BfmI	CTRYAG	4 cut(s)	945, 972, 981, 1990
BfrI	CTTAAG	1 cut(s)	262
BfuAI	ACCTGC	2 cut(s)	598, 1852
BlnI	CCTAGG	1 cut(s)	451
BmcAI	AGTACT	2 cut(s)	860, 2121
Bme1390I	CCNGG	9 cut(s)	93, 94, 166, 181, 419, 623, 1509, 1692, 1802
Bme18I	GGWCC	5 cut(s)	33, 156, 605, 619, 1864
BmeT110I	CYCGRG	2 cut(s)	92, 653
BmgT120I	GGNCC	6 cut(s)	33, 156, 605, 619, 642, 1864
BmiI	GGNNCC	6 cut(s)	34, 125, 141, 157, 170, 1464
BmrFI	CCNGG	9 cut(s)	93, 94, 166, 181, 419, 623, 1509, 1692, 1802
BmrI	ACTGGG	1 cut(s)	472
BmsI	GCATC	5 cut(s)	776, 1021, 1234, 1785, 2137
BmuI	ACTGGG	1 cut(s)	472
BpiI	GAAGAC	1 cut(s)	250
BpmI	CTGGAG	2 cut(s)	363, 1271
Bpu10I	CCTNAGC	2 cut(s)	1266, 2105
Bpu14I	TTCGAA	2 cut(s)	1795, 2142
BpuEI	CTTGAG	2 cut(s)	113, 1223
BpuMI	CCSGG	3 cut(s)	93, 94, 166
BsaBI	GATNNNNATC	1 cut(s)	2133
BsaI	GGTCTC	1 cut(s)	650
BsaJI	CCNNGG	8 cut(s)	92, 143, 431, 451, 823, 1131, 1329, 1507
BsaWI	WCCGGW	1 cut(s)	1866
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 1018, 1048
Bsc4I	CCNNNNNNNGG	5 cut(s)	149, 165, 231, 375, 895
Bse1I	ACTGG	7 cut(s)	288, 323, 346, 467, 820, 1217, 1497
Bse3DI	GCAATG	2 cut(s)	379, 1734
Bse8I	GATNNNNATC	1 cut(s)	2133
BseAI	TCCGGA	1 cut(s)	1866
BseBI	CCWGG	6 cut(s)	181, 419, 623, 1509, 1692, 1802
BseDI	CCNNGG	8 cut(s)	92, 143, 431, 451, 823, 1131, 1329, 1507
BseGI	GGATG	3 cut(s)	767, 1036, 1787
BseJI	GATNNNNATC	1 cut(s)	2133
BseLI	CCNNNNNNNGG	5 cut(s)	149, 165, 231, 375, 895
BseMI	GCAATG	2 cut(s)	379, 1734
BseMII	CTCAG	7 cut(s)	22, 512, 934, 1280, 1358, 2096, 2103
BseNI	ACTGG	7 cut(s)	288, 323, 346, 467, 820, 1217, 1497
BseXI	GCAGC	9 cut(s)	776, 928, 943, 958, 986, 995, 1661, 1889, 2023
Bsh1236I	CGCG	2 cut(s)	74, 101
BshFI	GGCC	3 cut(s)	644, 1060, 1852
BsiHKAI	GWGCWC	1 cut(s)	2111
BsiHKCI	CYCGRG	2 cut(s)	92, 653
BsiSI	CCGG	3 cut(s)	93, 166, 1867
BslFI	GGGAC	4 cut(s)	46, 391, 1693, 2149
BslI	CCNNNNNNNGG	5 cut(s)	149, 165, 231, 375, 895
BsmAI	GTCTC	6 cut(s)	339, 517, 546, 576, 650, 2046
BsmBI	CGTCTC	1 cut(s)	2046
BsmFI	GGGAC	4 cut(s)	46, 391, 1693, 2149
BsmI	GAATGC	2 cut(s)	1157, 1169
BsnI	GGCC	3 cut(s)	644, 1060, 1852
Bso31I	GGTCTC	1 cut(s)	650
BsoBI	CYCGRG	2 cut(s)	92, 653
Bsp119I	TTCGAA	2 cut(s)	1795, 2142
Bsp1286I	GDGCHC	1 cut(s)	2111
Bsp13I	TCCGGA	1 cut(s)	1866
BspACI	CCGC	3 cut(s)	101, 153, 1096
BspANI	GGCC	3 cut(s)	644, 1060, 1852
BspCNI	CTCAG	7 cut(s)	21, 513, 933, 1279, 1357, 2097, 2104
BspEI	TCCGGA	1 cut(s)	1866
BspFNI	CGCG	2 cut(s)	74, 101
BspLI	GGNNCC	6 cut(s)	34, 125, 141, 157, 170, 1464
BspMAI	CTGCAG	2 cut(s)	976, 985
BspMI	ACCTGC	2 cut(s)	598, 1852
BspT104I	TTCGAA	2 cut(s)	1795, 2142
BspTI	CTTAAG	1 cut(s)	262
BspTNI	GGTCTC	1 cut(s)	650
BsrDI	GCAATG	2 cut(s)	379, 1734
BsrI	ACTGG	7 cut(s)	288, 323, 346, 467, 820, 1217, 1497
BssECI	CCNNGG	8 cut(s)	92, 143, 431, 451, 823, 1131, 1329, 1507
BssT1I	CCWWGG	3 cut(s)	431, 451, 823
Bst2UI	CCWGG	6 cut(s)	181, 419, 623, 1509, 1692, 1802
Bst4CI	ACNGT	8 cut(s)	271, 1024, 1132, 1246, 1362, 1393, 1714, 1944
Bst6I	CTCTTC	1 cut(s)	419
BstAFI	CTTAAG	1 cut(s)	262
BstAPI	GCANNNNNTGC	2 cut(s)	761, 980
BstBI	TTCGAA	2 cut(s)	1795, 2142
BstC8I	GCNNGC	1 cut(s)	1272
BstDEI	CTNAG	9 cut(s)	8, 521, 867, 920, 1266, 1288, 1344, 2105, 2112
BstDSI	CCRYGG	2 cut(s)	143, 1131
BstF5I	GGATG	3 cut(s)	767, 1036, 1787
BstFNI	CGCG	2 cut(s)	74, 101
BstHHI	GCGC	1 cut(s)	1237
BstMAI	GTCTC	6 cut(s)	339, 517, 546, 576, 650, 2046
BstMWI	GCNNNNNNNGC	7 cut(s)	313, 761, 980, 983, 1096, 1222, 1858
BstNI	CCWGG	6 cut(s)	181, 419, 623, 1509, 1692, 1802
BstNSI	RCATGY	3 cut(s)	512, 1001, 1861
BstSCI	CCNGG	9 cut(s)	91, 92, 164, 179, 417, 621, 1507, 1690, 1800
BstSFI	CTRYAG	4 cut(s)	945, 972, 981, 1990
BstUI	CGCG	2 cut(s)	74, 101
BstV1I	GCAGC	9 cut(s)	776, 928, 943, 958, 986, 995, 1661, 1889, 2023
BstV2I	GAAGAC	1 cut(s)	250
BstX2I	RGATCY	4 cut(s)	4, 123, 139, 1462
BstXI	CCANNNNNNTGG	1 cut(s)	438
BstYI	RGATCY	4 cut(s)	4, 123, 139, 1462
BsuRI	GGCC	3 cut(s)	644, 1060, 1852
BtgI	CCRYGG	2 cut(s)	143, 1131
BtsCI	GGATG	3 cut(s)	767, 1036, 1787
BtsI	GCAGTG	1 cut(s)	240
BtsIMutI	CAGTG	7 cut(s)	240, 267, 333, 339, 671, 1389, 1742
BveI	ACCTGC	2 cut(s)	598, 1852
Cac8I	GCNNGC	1 cut(s)	1272
CaiI	CAGNNNCTG	2 cut(s)	329, 980
CfoI	GCGC	1 cut(s)	1237
Cfr13I	GGNCC	6 cut(s)	33, 156, 605, 619, 642, 1864
Cfr9I	CCCGGG	1 cut(s)	92
CseI	GACGC	2 cut(s)	2028, 2030
CsiI	ACCWGGT	1 cut(s)	621
Csp6I	GTAC	7 cut(s)	109, 859, 1358, 1440, 1768, 1891, 2120
CviAII	CATG	6 cut(s)	509, 998, 1352, 1858, 1903, 2068
CviQI	GTAC	7 cut(s)	109, 859, 1358, 1440, 1768, 1891, 2120
DdeI	CTNAG	9 cut(s)	8, 521, 867, 920, 1266, 1288, 1344, 2105, 2112
DrdI	GACNNNNNNGTC	1 cut(s)	245
DseDI	GACNNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	1 cut(s)	1850
Eam1104I	CTCTTC	1 cut(s)	419
EarI	CTCTTC	1 cut(s)	419
Ecl136II	GAGCTC	1 cut(s)	2109
Eco130I	CCWWGG	3 cut(s)	431, 451, 823
Eco24I	GRGCYC	1 cut(s)	2111
Eco31I	GGTCTC	1 cut(s)	650
Eco47I	GGWCC	5 cut(s)	33, 156, 605, 619, 1864
Eco53kI	GAGCTC	1 cut(s)	2109
Eco57I	CTGAAG	4 cut(s)	621, 771, 1565, 1653
Eco88I	CYCGRG	2 cut(s)	92, 653
EcoICRI	GAGCTC	1 cut(s)	2109
EcoO109I	RGGNCCY	1 cut(s)	33
EcoRI	GAATTC	2 cut(s)	199, 1335
EcoRII	CCWGG	6 cut(s)	179, 417, 621, 1507, 1690, 1800
EcoT14I	CCWWGG	3 cut(s)	431, 451, 823
EcoT38I	GRGCYC	1 cut(s)	2111
ErhI	CCWWGG	3 cut(s)	431, 451, 823
Esp3I	CGTCTC	1 cut(s)	2046
FaeI	CATG	6 cut(s)	512, 1001, 1355, 1861, 1906, 2071
FalI	AAGNNNNNCTT	2 cut(s)	1504, 1536
FaqI	GGGAC	4 cut(s)	46, 391, 1693, 2149
FatI	CATG	6 cut(s)	508, 997, 1351, 1857, 1902, 2067
FauI	CCCGC	1 cut(s)	146
FbaI	TGATCA	3 cut(s)	1593, 1746, 2134
FblI	GTMKAC	3 cut(s)	249, 459, 994
FokI	GGATG	3 cut(s)	754, 1043, 1794
FriOI	GRGCYC	1 cut(s)	2111
FspBI	CTAG	6 cut(s)	452, 960, 1500, 1662, 1683, 2126
GlaI	GCGC	1 cut(s)	1236
GsuI	CTGGAG	2 cut(s)	363, 1271
HaeIII	GGCC	3 cut(s)	644, 1060, 1852
HapII	CCGG	3 cut(s)	93, 166, 1867
HgaI	GACGC	2 cut(s)	2028, 2030
HhaI	GCGC	1 cut(s)	1237
Hin1II	CATG	6 cut(s)	512, 1001, 1355, 1861, 1906, 2071
Hin6I	GCGC	1 cut(s)	1235
HinP1I	GCGC	1 cut(s)	1235
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HindIII	AAGCTT	1 cut(s)	737
HinfI	GANTC	5 cut(s)	55, 118, 427, 629, 1870
HpaII	CCGG	3 cut(s)	93, 166, 1867
HphI	GGTGA	5 cut(s)	709, 1022, 1204, 1522, 1706
Hpy166II	GTNNAC	6 cut(s)	109, 238, 250, 460, 700, 995
Hpy8I	GTNNAC	6 cut(s)	109, 238, 250, 460, 700, 995
HpyAV	CCTTC	9 cut(s)	490, 596, 716, 785, 1350, 1453, 1628, 1802, 1836
HpyCH4III	ACNGT	8 cut(s)	271, 1024, 1132, 1246, 1362, 1393, 1714, 1944
HpyCH4IV	ACGT	3 cut(s)	745, 1430, 1986
HpyF10VI	GCNNNNNNNGC	7 cut(s)	313, 761, 980, 983, 1096, 1222, 1858
HpyF3I	CTNAG	9 cut(s)	8, 521, 867, 920, 1266, 1288, 1344, 2105, 2112
HpySE526I	ACGT	3 cut(s)	745, 1430, 1986
Hsp92II	CATG	6 cut(s)	512, 1001, 1355, 1861, 1906, 2071
HspAI	GCGC	1 cut(s)	1235
Kpn2I	TCCGGA	1 cut(s)	1866
Ksp22I	TGATCA	3 cut(s)	1593, 1746, 2134
LmnI	GCTCC	3 cut(s)	1039, 1744, 2071
Lsp1109I	GCAGC	9 cut(s)	776, 928, 943, 958, 986, 995, 1661, 1889, 2023
LweI	GCATC	5 cut(s)	776, 1021, 1234, 1785, 2137
MabI	ACCWGGT	1 cut(s)	621
MaeI	CTAG	6 cut(s)	452, 960, 1500, 1662, 1683, 2126
MaeII	ACGT	3 cut(s)	745, 1430, 1986
MaeIII	GTNAC	9 cut(s)	475, 679, 1010, 1024, 1414, 1483, 1528, 1897, 1982
MboII	GAAGA	9 cut(s)	250, 436, 745, 883, 946, 1253, 1276, 1969, 2156
MfeI	CAATTG	1 cut(s)	1152
MflI	RGATCY	4 cut(s)	4, 123, 139, 1462
MhlI	GDGCHC	1 cut(s)	2111
MlsI	TGGCCA	1 cut(s)	1852
MluNI	TGGCCA	1 cut(s)	1852
MlyI	GAGTC	1 cut(s)	436
Mox20I	TGGCCA	1 cut(s)	1852
MroI	TCCGGA	1 cut(s)	1866
MroXI	GAANNNNTTC	1 cut(s)	1339
MscI	TGGCCA	1 cut(s)	1852
MseI	TTAA	3 cut(s)	263, 536, 876
MslI	CAYNNNNRTG	1 cut(s)	1535
Msp20I	TGGCCA	1 cut(s)	1852
MspCI	CTTAAG	1 cut(s)	262
MspI	CCGG	3 cut(s)	93, 166, 1867
MspR9I	CCNGG	9 cut(s)	93, 94, 166, 181, 419, 623, 1509, 1692, 1802
MunI	CAATTG	1 cut(s)	1152
Mva1269I	GAATGC	2 cut(s)	1157, 1169
MvaI	CCWGG	6 cut(s)	181, 419, 623, 1509, 1692, 1802
MvnI	CGCG	2 cut(s)	74, 101
MwoI	GCNNNNNNNGC	7 cut(s)	313, 761, 980, 983, 1096, 1222, 1858
NciI	CCSGG	3 cut(s)	93, 94, 166
NlaIII	CATG	6 cut(s)	512, 1001, 1355, 1861, 1906, 2071
NlaIV	GGNNCC	6 cut(s)	34, 125, 141, 157, 170, 1464
NmeAIII	GCCGAG	1 cut(s)	1354
NmuCI	GTSAC	3 cut(s)	1010, 1024, 1528
NspI	RCATGY	3 cut(s)	512, 1001, 1861
NspV	TTCGAA	2 cut(s)	1795, 2142
OliI	CACNNNNGTG	1 cut(s)	1535
PciI	ACATGT	1 cut(s)	508
PctI	GAATGC	2 cut(s)	1157, 1169
PdmI	GAANNNNTTC	1 cut(s)	1339
PfeI	GAWTC	4 cut(s)	55, 118, 629, 1870
PleI	GAGTC	1 cut(s)	435
PpsI	GAGTC	1 cut(s)	435
PpuMI	RGGWCCY	1 cut(s)	33
PscI	ACATGT	1 cut(s)	508
PshBI	ATTAAT	1 cut(s)	876
PsiI	TTATAA	2 cut(s)	1280, 2082
Psp124BI	GAGCTC	1 cut(s)	2111
Psp1406I	AACGTT	1 cut(s)	1430
Psp5II	RGGWCCY	1 cut(s)	33
Psp6I	CCWGG	6 cut(s)	179, 417, 621, 1507, 1690, 1800
PspGI	CCWGG	6 cut(s)	179, 417, 621, 1507, 1690, 1800
PspN4I	GGNNCC	6 cut(s)	34, 125, 141, 157, 170, 1464
PspPI	GGNCC	6 cut(s)	33, 156, 605, 619, 642, 1864
PspPPI	RGGWCCY	1 cut(s)	33
PstI	CTGCAG	2 cut(s)	976, 985
PstNI	CAGNNNCTG	2 cut(s)	329, 980
PsuI	RGATCY	4 cut(s)	4, 123, 139, 1462
RsaI	GTAC	7 cut(s)	110, 860, 1359, 1441, 1769, 1892, 2121
RsaNI	GTAC	7 cut(s)	109, 859, 1358, 1440, 1768, 1891, 2120
RseI	CAYNNNNRTG	1 cut(s)	1535
SacI	GAGCTC	1 cut(s)	2111
SaqAI	TTAA	3 cut(s)	263, 536, 876
Sau96I	GGNCC	6 cut(s)	33, 156, 605, 619, 642, 1864
ScaI	AGTACT	2 cut(s)	860, 2121
SchI	GAGTC	1 cut(s)	436
ScrFI	CCNGG	9 cut(s)	93, 94, 166, 181, 419, 623, 1509, 1692, 1802
SduI	GDGCHC	1 cut(s)	2111
SexAI	ACCWGGT	1 cut(s)	621
SfaNI	GCATC	5 cut(s)	776, 1021, 1234, 1785, 2137
SfcI	CTRYAG	4 cut(s)	945, 972, 981, 1990
SfuI	TTCGAA	2 cut(s)	1795, 2142
SinI	GGWCC	5 cut(s)	33, 156, 605, 619, 1864
SmaI	CCCGGG	1 cut(s)	94
SmiMI	CAYNNNNRTG	1 cut(s)	1535
SmlI	CTYRAG	3 cut(s)	128, 262, 1238
SmoI	CTYRAG	3 cut(s)	128, 262, 1238
SpeI	ACTAGT	1 cut(s)	959
SsiI	CCGC	3 cut(s)	101, 153, 1096
SspI	AATATT	1 cut(s)	1379
SspMI	CTAG	6 cut(s)	452, 960, 1500, 1662, 1683, 2126
SstI	GAGCTC	1 cut(s)	2111
StyD4I	CCNGG	9 cut(s)	91, 92, 164, 179, 417, 621, 1507, 1690, 1800
StyI	CCWWGG	3 cut(s)	431, 451, 823
TaaI	ACNGT	8 cut(s)	271, 1024, 1132, 1246, 1362, 1393, 1714, 1944
TaiI	ACGT	3 cut(s)	748, 1433, 1989
TaqI	TCGA	3 cut(s)	1455, 1795, 2142
TatI	WGTACW	5 cut(s)	108, 858, 1439, 1767, 2119
TauI	GCSGC	1 cut(s)	1099
TfiI	GAWTC	4 cut(s)	55, 118, 629, 1870
Tru1I	TTAA	3 cut(s)	263, 536, 876
Tru9I	TTAA	3 cut(s)	263, 536, 876
TscAI	CASTG	7 cut(s)	247, 274, 340, 346, 678, 1396, 1749
TseFI	GTSAC	3 cut(s)	1010, 1024, 1528
TseI	GCWGC	9 cut(s)	764, 931, 941, 971, 974, 983, 1649, 1877, 2036
Tsp45I	GTSAC	3 cut(s)	1010, 1024, 1528
TspDTI	ATGAA	4 cut(s)	621, 894, 1150, 1845
TspGWI	ACGGA	2 cut(s)	132, 1043
TspMI	CCCGGG	1 cut(s)	92
TspRI	CASTG	7 cut(s)	247, 274, 340, 346, 678, 1396, 1749
Vha464I	CTTAAG	1 cut(s)	262
VpaK11BI	GGWCC	5 cut(s)	33, 156, 605, 619, 1864
VspI	ATTAAT	1 cut(s)	876
XapI	RAATTY	6 cut(s)	199, 1196, 1335, 1928, 2000, 2076
XceI	RCATGY	3 cut(s)	512, 1001, 1861
XmaI	CCCGGG	1 cut(s)	92
XmaJI	CCTAGG	1 cut(s)	451
XmiI	GTMKAC	3 cut(s)	249, 459, 994
XmnI	GAANNNNTTC	1 cut(s)	1339
XspI	CTAG	6 cut(s)	452, 960, 1500, 1662, 1683, 2126
ZrmI	AGTACT	2 cut(s)	860, 2121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.