CSC1-like protein ERD4
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30360 |
| fragaria_vesca | FvH4_3g04980 FvH4_3g04980 |
| malus_domestica | MD05G1278500.v1.1 MD10G1257300.v1.1 |
| prunus_persica | Prupe.4G086300_v2.0.a1 |
| pyrus_communis | pycom05g25910 pycom10g21280 pycom10g21310 pycom10g21330 |
| rosa_chinensis | RchiOBHm_Chr5g0015001 |
| rosa_laevigata | RLG00000032159 |
| rosa_multiflora | Rmu_sc0004889.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00061540 |
| rosa_rugosa | Rorug05G0022600 Rorug05G0022700 |
| rosa_samantha | Rh5AG117900 Rh5BG115100 |
| rosa_wichuraiana | Rw5G010160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 508 |
| AccI | GTMKAC | 1 cut(s) | 518 |
| AciI | CCGC | 2 cut(s) | 461, 508 |
| AcoI | YGGCCR | 1 cut(s) | 96 |
| AcuI | CTGAAG | 1 cut(s) | 306 |
| AgsI | TTSAA | 5 cut(s) | 170, 253, 268, 311, 497 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 431 |
| AjnI | CCWGG | 2 cut(s) | 66, 105 |
| AluBI | AGCT | 4 cut(s) | 33, 127, 149, 263 |
| AluI | AGCT | 4 cut(s) | 33, 127, 149, 263 |
| Alw26I | GTCTC | 1 cut(s) | 418 |
| Ama87I | CYCGRG | 1 cut(s) | 86 |
| AoxI | GGCC | 2 cut(s) | 96, 509 |
| ApeKI | GCWGC | 1 cut(s) | 298 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 93, 125 |
| AsuC2I | CCSGG | 1 cut(s) | 142 |
| AsuHPI | GGTGA | 1 cut(s) | 480 |
| AvaI | CYCGRG | 1 cut(s) | 86 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 63, 95 |
| BbvI | GCAGC | 1 cut(s) | 285 |
| BceAI | ACGGC | 1 cut(s) | 111 |
| BciT130I | CCWGG | 2 cut(s) | 68, 107 |
| BciVI | GTATCC | 1 cut(s) | 82 |
| BclI | TGATCA | 1 cut(s) | 355 |
| BcnI | CCSGG | 1 cut(s) | 142 |
| BcoDI | GTCTC | 1 cut(s) | 418 |
| BfaI | CTAG | 1 cut(s) | 164 |
| BfuI | GTATCC | 1 cut(s) | 82 |
| BisI | GCNGC | 2 cut(s) | 299, 509 |
| BlsI | GCNGC | 2 cut(s) | 300, 510 |
| Bme1390I | CCNGG | 3 cut(s) | 68, 107, 142 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 431 |
| BmeT110I | CYCGRG | 1 cut(s) | 86 |
| BmrFI | CCNGG | 3 cut(s) | 68, 107, 142 |
| BmsI | GCATC | 1 cut(s) | 494 |
| BpmI | CTGGAG | 2 cut(s) | 89, 141 |
| BpuMI | CCSGG | 1 cut(s) | 142 |
| BsaBI | GATNNNNATC | 1 cut(s) | 392 |
| BsaI | GGTCTC | 1 cut(s) | 418 |
| BsaJI | CCNNGG | 1 cut(s) | 119 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 415, 445 |
| Bse8I | GATNNNNATC | 1 cut(s) | 392 |
| BseBI | CCWGG | 2 cut(s) | 68, 107 |
| BseDI | CCNNGG | 1 cut(s) | 119 |
| BseGI | GGATG | 2 cut(s) | 298, 406 |
| BseJI | GATNNNNATC | 1 cut(s) | 392 |
| BseMII | CTCAG | 1 cut(s) | 225 |
| BseRI | GAGGAG | 1 cut(s) | 74 |
| BseXI | GCAGC | 1 cut(s) | 285 |
| BshFI | GGCC | 2 cut(s) | 98, 511 |
| BsiHKCI | CYCGRG | 1 cut(s) | 86 |
| BsiSI | CCGG | 1 cut(s) | 142 |
| BslFI | GGGAC | 1 cut(s) | 419 |
| BsmAI | GTCTC | 1 cut(s) | 418 |
| BsmFI | GGGAC | 1 cut(s) | 419 |
| BsnI | GGCC | 2 cut(s) | 98, 511 |
| Bso31I | GGTCTC | 1 cut(s) | 418 |
| BsoBI | CYCGRG | 1 cut(s) | 86 |
| Bsp143I | GATC | 2 cut(s) | 355, 360 |
| BspACI | CCGC | 2 cut(s) | 461, 508 |
| BspANI | GGCC | 2 cut(s) | 98, 511 |
| BspCNI | CTCAG | 1 cut(s) | 226 |
| BspTNI | GGTCTC | 1 cut(s) | 418 |
| BsrBI | CCGCTC | 1 cut(s) | 508 |
| BssECI | CCNNGG | 1 cut(s) | 119 |
| BssMI | GATC | 2 cut(s) | 355, 360 |
| BssT1I | CCWWGG | 1 cut(s) | 119 |
| Bst2UI | CCWGG | 2 cut(s) | 68, 107 |
| Bst6I | CTCTTC | 2 cut(s) | 184, 282 |
| BstC8I | GCNNGC | 2 cut(s) | 31, 303 |
| BstDEI | CTNAG | 1 cut(s) | 234 |
| BstF5I | GGATG | 2 cut(s) | 298, 406 |
| BstKTI | GATC | 2 cut(s) | 358, 363 |
| BstMAI | GTCTC | 1 cut(s) | 418 |
| BstMBI | GATC | 2 cut(s) | 355, 360 |
| BstNI | CCWGG | 2 cut(s) | 68, 107 |
| BstSCI | CCNGG | 3 cut(s) | 66, 105, 140 |
| BstV1I | GCAGC | 1 cut(s) | 285 |
| BsuI | GTATCC | 1 cut(s) | 82 |
| BsuRI | GGCC | 2 cut(s) | 98, 511 |
| BtsCI | GGATG | 2 cut(s) | 298, 406 |
| Cac8I | GCNNGC | 2 cut(s) | 31, 303 |
| CsiI | ACCWGGT | 1 cut(s) | 66 |
| CviAII | CATG | 2 cut(s) | 397, 522 |
| CviJI | RGCY | 8 cut(s) | 33, 91, 98, 127, 149, 161, 263, 511 |
| CviKI_1 | RGCY | 8 cut(s) | 33, 91, 98, 127, 149, 161, 263, 511 |
| DdeI | CTNAG | 1 cut(s) | 234 |
| DpnI | GATC | 2 cut(s) | 357, 362 |
| DpnII | GATC | 2 cut(s) | 355, 360 |
| DriI | GACNNNNNGTC | 1 cut(s) | 431 |
| EaeI | YGGCCR | 1 cut(s) | 96 |
| Eam1104I | CTCTTC | 2 cut(s) | 184, 282 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 431 |
| EarI | CTCTTC | 2 cut(s) | 184, 282 |
| Eco130I | CCWWGG | 1 cut(s) | 119 |
| Eco31I | GGTCTC | 1 cut(s) | 418 |
| Eco57I | CTGAAG | 1 cut(s) | 306 |
| Eco88I | CYCGRG | 1 cut(s) | 86 |
| EcoRII | CCWGG | 2 cut(s) | 66, 105 |
| EcoT14I | CCWWGG | 1 cut(s) | 119 |
| ErhI | CCWWGG | 1 cut(s) | 119 |
| FaeI | CATG | 2 cut(s) | 400, 525 |
| FaiI | YATR | 6 cut(s) | 47, 60, 229, 345, 398, 523 |
| FaqI | GGGAC | 1 cut(s) | 419 |
| FatI | CATG | 2 cut(s) | 396, 521 |
| FbaI | TGATCA | 1 cut(s) | 355 |
| FblI | GTMKAC | 1 cut(s) | 518 |
| Fnu4HI | GCNGC | 2 cut(s) | 299, 509 |
| FokI | GGATG | 2 cut(s) | 305, 413 |
| Fsp4HI | GCNGC | 2 cut(s) | 299, 509 |
| FspBI | CTAG | 1 cut(s) | 164 |
| GluI | GCNGC | 2 cut(s) | 299, 509 |
| GsuI | CTGGAG | 2 cut(s) | 89, 141 |
| HaeIII | GGCC | 2 cut(s) | 98, 511 |
| HapII | CCGG | 1 cut(s) | 142 |
| Hin1II | CATG | 2 cut(s) | 400, 525 |
| HincII | GTYRAC | 2 cut(s) | 112, 519 |
| HindII | GTYRAC | 2 cut(s) | 112, 519 |
| HindIII | AAGCTT | 2 cut(s) | 125, 261 |
| HpaII | CCGG | 1 cut(s) | 142 |
| HphI | GGTGA | 1 cut(s) | 480 |
| Hpy166II | GTNNAC | 2 cut(s) | 112, 519 |
| Hpy188I | TCNGA | 4 cut(s) | 223, 235, 360, 365 |
| Hpy188III | TCNNGA | 2 cut(s) | 131, 436 |
| Hpy8I | GTNNAC | 2 cut(s) | 112, 519 |
| Hpy99I | CGWCG | 1 cut(s) | 97 |
| HpyAV | CCTTC | 2 cut(s) | 89, 475 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 244, 347, 392 |
| HpyF3I | CTNAG | 1 cut(s) | 234 |
| Hsp92II | CATG | 2 cut(s) | 400, 525 |
| Ksp22I | TGATCA | 1 cut(s) | 355 |
| Kzo9I | GATC | 2 cut(s) | 355, 360 |
| LmnI | GCTCC | 2 cut(s) | 121, 160 |
| Lsp1109I | GCAGC | 1 cut(s) | 285 |
| LweI | GCATC | 1 cut(s) | 494 |
| MabI | ACCWGGT | 1 cut(s) | 66 |
| MaeI | CTAG | 1 cut(s) | 164 |
| MalI | GATC | 2 cut(s) | 357, 362 |
| MbiI | CCGCTC | 1 cut(s) | 508 |
| MboI | GATC | 2 cut(s) | 355, 360 |
| MboII | GAAGA | 5 cut(s) | 201, 299, 323, 380, 485 |
| MluCI | AATT | 1 cut(s) | 248 |
| MnlI | CCTC | 6 cut(s) | 49, 95, 229, 229, 283, 463 |
| MseI | TTAA | 1 cut(s) | 11 |
| MslI | CAYNNNNRTG | 1 cut(s) | 401 |
| MspI | CCGG | 1 cut(s) | 142 |
| MspR9I | CCNGG | 3 cut(s) | 68, 107, 142 |
| MvaI | CCWGG | 2 cut(s) | 68, 107 |
| NciI | CCSGG | 1 cut(s) | 142 |
| NdeII | GATC | 2 cut(s) | 355, 360 |
| NlaIII | CATG | 2 cut(s) | 400, 525 |
| PaeR7I | CTCGAG | 1 cut(s) | 86 |
| PkrI | GCNGC | 2 cut(s) | 300, 510 |
| Psp6I | CCWGG | 2 cut(s) | 66, 105 |
| PspGI | CCWGG | 2 cut(s) | 66, 105 |
| PspXI | VCTCGAGB | 1 cut(s) | 86 |
| RseI | CAYNNNNRTG | 1 cut(s) | 401 |
| SalI | GTCGAC | 1 cut(s) | 517 |
| SaqAI | TTAA | 1 cut(s) | 11 |
| SatI | GCNGC | 2 cut(s) | 299, 509 |
| Sau3AI | GATC | 2 cut(s) | 355, 360 |
| ScrFI | CCNGG | 3 cut(s) | 68, 107, 142 |
| SetI | ASST | 9 cut(s) | 35, 72, 111, 129, 151, 240, 265, 430, 493 |
| SexAI | ACCWGGT | 1 cut(s) | 66 |
| SfaNI | GCATC | 1 cut(s) | 494 |
| Sfr274I | CTCGAG | 1 cut(s) | 86 |
| SlaI | CTCGAG | 1 cut(s) | 86 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 401 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| Sse9I | AATT | 1 cut(s) | 248 |
| SsiI | CCGC | 2 cut(s) | 461, 508 |
| SspMI | CTAG | 1 cut(s) | 164 |
| StyD4I | CCNGG | 3 cut(s) | 66, 105, 140 |
| StyI | CCWWGG | 1 cut(s) | 119 |
| TaqI | TCGA | 3 cut(s) | 87, 132, 518 |
| TasI | AATT | 1 cut(s) | 248 |
| TauI | GCSGC | 1 cut(s) | 511 |
| Tru1I | TTAA | 1 cut(s) | 11 |
| Tru9I | TTAA | 1 cut(s) | 11 |
| TseI | GCWGC | 1 cut(s) | 298 |
| XhoI | CTCGAG | 1 cut(s) | 86 |
| XmiI | GTMKAC | 1 cut(s) | 518 |
| XspI | CTAG | 1 cut(s) | 164 |