Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0012217

Physical Location & Seq

Genomic Coordinates Reverse (-)

4667205 .. 4672711

Gene Structure 5507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g07910.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGCTTTGTGTATGTAATCAGATTTGGGAGGACATTCAGAATGGAAAAGCTTTGGAGGATAGTTCAGTACTTTCCAGGTTCCTCCTTATCTCTTTTGCAGACCTTAAAAAATGGAGCTTTCATTACTTGTTTGCCTTCCCGGCTCTGTTGCTTGATCCTCCAGCAACATTGATTGATTTGAAAGCAGCTTCACAAGTTTTTAGTGTGGAGGAGGCAGAATCTGTCTCAACAGCATTAAATGACTGGCGCGGCTCAATCTTAACTACAGACGTGCCGTTCTTTTTGGTTGTAATTGATTCAAATTCACATGCTACCGTTAAGCATTTAAAGGATTGGGAAACCTGTCAAAGTTCTTCTTATCAGAAGGTCCTATTTGGGTTTTATGACCCATGCCATCTCCCAAAGAACCCTGGTTGGCCGCTTCGGAACTTGCTTGCGCTTATTGGCTCAAGATGGGATATAAAGTCTGTTAGCTTCCTATGCTATAGAGAGACTCGTGGTTTTGCAGATCTAGGATTGTCTCTTGTTGGTAAAGCCCAGATTACAGTTCAACAAGGATGTGGAGATGTTCGTAATACACCTAATGCAGTGGGGTGGGAACCTAATTACAAAGGGAAAATAGAACCCAGGTGCATTAGCCTTGCTGAATCTATGGATCCAACTCGGTTGGCTGTATCTGCTGCAGATTTGAATTTGAAACTAATGAGATGGCGTGCTTTACCTTCTCTCAACTTAAATTCCTTGTCCTCTCTCAAGTGTCTTCTCCTTGGAGCAGGTACCCTTGGATGCCAGGTTGCTCGCATGCTTATGGCTTGGGGTGTTCGCAAAATTACTTTGGTTGACAATGGCAGAGTGGCTATGTCTAATCCCTTAAGGCAATCCCTGTATACATTAGATGACTGTCTAAATGGTGGTGAATTTAAAGCCGTAGCAGCAGTTAATAGTCTCAAGAAAATATTTCCCGCTGTGGAAGCAGAGGGTATTGTCATGGCTATACCAATGCCTGGACATCCTGTTCCTAGCCAAGAAGAGCAGAGTGTGCTTGATGATTGTAGGCGCCTACATGACTTGATTGATTCTCATGATGCAGTTTTTCTGTTAACGGATACAAGAGAAAGTCGGTGGCTGCCGTCTCTTCTTTGTGCCAATACTAACAAGATTACTATAACTGCAGCTCTGGGGTTTGATAGCTTTTTAGTTATGCGCCATGGAGCAGGTCCATGCAGCTCTAGCCATTACTCAAATTGTGAAGCTGCAAATGCTTTATCCACTGATCTGAGCAACCTTGTACTGACTAATAGAAATGGAGGGCACAGATTGGGTTGTTACTTCTGCAATGATGTGGTTGCGCCTATCGATTCAACTGCCAACCGCACCTTGGACCAGCAATGCACTGTTACACGCCCAGGTCTCGCTCCTATTGCCTCAGCTCTTGCAGTTGAGCTCTTAGTTGGCATCCTGCATCACCCTGATGGGATATTTGCCGAAGGTGAAATTGCAAACTCTAGTAATAATGGAAGCAGTGAGCAACCTCTTGGTATTTTACCCCATCAAATCCGTGGTTCCCTTGGACAGTTCTCACAGATGACACTTGTAGGCCACTCCTCAGACAGTTGCACGGCTTGCTGCAGCATTGTGGTGTCTGAATATCGGAAAAGGGGAATGGAATTTATACTACAAGCAATCAACCATCCCACCTATCTGGAGGACGTGACTGGACTAACAGAGTTGATGAAAACAGCTACTGCATTTCAAATGGATTGGGATGATGGGACTGATAACGATGATGATGATTGTGTTGAAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006501 GO:0006807 GO:0006914 GO:0006950 GO:0006952 GO:0006995 GO:0006996 GO:0007005 GO:0007033 GO:0007154 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008641 GO:0009056 GO:0009058 GO:0009059 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0009991 GO:0010150 GO:0016043 GO:0016236 GO:0016237 GO:0016740 GO:0016874 GO:0016877 GO:0018410 GO:0019538 GO:0019778 GO:0019779 GO:0022411 GO:0022607 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0034645 GO:0034727 GO:0036211 GO:0042157 GO:0042158 GO:0042594 GO:0043170 GO:0043207 GO:0043412 GO:0043562 GO:0043687 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044804 GO:0044805 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0061726 GO:0061919 GO:0070925 GO:0071496 GO:0071704 GO:0071840 GO:0090693 GO:0098542 GO:0099402 GO:1901564 GO:1901566 GO:1901576 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 ko04216 map04136 map04138 map04140 map04216

Pfam Domains

Protein Families

ATG7_N ThiF

Protein Analysis

603

Amino Acids

65.83

Weight (kDa)

5.28

Isoelectric Point (pI)

38.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATG7_N	PF16420	5 - 218	2.4e-64	Ubiquitin-like modifier-activating enzyme ATG7 N-terminus
ThiF	PF00899	235 - 491	1.1e-37	ThiF family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45900
fragaria_vesca	FvH4_3g07910
malus_domestica	MD05G1302300.v1.1 MD10G1281000.v1.1
prunus_persica	Prupe.4G060100_v2.0.a1 Prupe.4G060100_v2.0.a1 Prupe.4G060100_v2.0.a1
pyrus_communis	pycom05g27990 pycom10g23460
rosa_chinensis	RchiOBHm_Chr5g0010641
rosa_laevigata	RLG00000031768
rosa_multiflora	Rmu_sc0006103.1_g000002 Rmu_sc0014635.1_g000003
rosa_roxburghii	Rroxscaffold_1G00065730
rosa_rugosa	Rorug04G0451400.1
rosa_samantha	Rh5AG083000 Rh5CG091000
rosa_wichuraiana	Rw0G000680 Rw0G021850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	764, 1205
Acc65I	GGTACC	1 cut(s)	776
AccB1I	GGYRCC	2 cut(s)	776, 1056
AccB7I	CCANNNNNTGG	1 cut(s)	1004
AccI	GTMKAC	1 cut(s)	887
AccII	CGCG	1 cut(s)	249
AciI	CCGC	4 cut(s)	249, 419, 963, 1372
AclWI	GGATC	3 cut(s)	149, 650, 663
AcoI	YGGCCR	1 cut(s)	416
AcsI	RAATTY	5 cut(s)	301, 691, 736, 917, 1667
AcyI	GRCGYC	1 cut(s)	1057
AfaI	GTAC	3 cut(s)	69, 778, 1290
AfiI	CCNNNNNNNGG	2 cut(s)	1004, 1378
AflII	CTTAAG	1 cut(s)	871
AgsI	TTSAA	8 cut(s)	181, 300, 551, 691, 697, 1362, 1754, 1802
AjiI	CACGTC	2 cut(s)	271, 1711
AjnI	CCWGG	6 cut(s)	74, 409, 626, 789, 1003, 1405
AloI	GAACNNNNNNTCC	2 cut(s)	999, 1031
Alw21I	GWGCWC	1 cut(s)	1446
Alw26I	GTCTC	6 cut(s)	229, 485, 525, 950, 1137, 1415
AlwI	GGATC	3 cut(s)	149, 650, 663
AlwNI	CAGNNNCTG	2 cut(s)	221, 1745
AoxI	GGCC	2 cut(s)	416, 1597
ApeKI	GCWGC	9 cut(s)	185, 680, 932, 1126, 1172, 1224, 1253, 1626, 1629
ApoI	RAATTY	5 cut(s)	301, 691, 736, 917, 1667
Asp718I	GGTACC	1 cut(s)	776
AspLEI	GCGC	5 cut(s)	249, 439, 1059, 1206, 1351
AspS9I	GGNCC	3 cut(s)	367, 1217, 1381
AsuC2I	CCSGG	1 cut(s)	140
AsuHPI	GGTGA	3 cut(s)	926, 1457, 1502
AvaII	GGWCC	3 cut(s)	367, 1217, 1381
BaeGI	GKGCMC	1 cut(s)	1314
BamHI	GGATCC	1 cut(s)	655
BanI	GGYRCC	2 cut(s)	776, 1056
BanII	GRGCYC	1 cut(s)	1446
BauI	CACGAG	1 cut(s)	495
BbsI	GAAGAC	1 cut(s)	752
Bbv12I	GWGCWC	1 cut(s)	1446
BbvCI	CCTCAGC	1 cut(s)	1426
BbvI	GCAGC	9 cut(s)	197, 667, 944, 1113, 1184, 1236, 1240, 1613, 1641
BccI	CCATC	7 cut(s)	402, 447, 702, 1466, 1557, 1698, 1763
BceAI	ACGGC	4 cut(s)	259, 911, 1114, 1635
BcgI	CGANNNNNNTGC	2 cut(s)	1346, 1380
BciT130I	CCWGG	6 cut(s)	76, 411, 628, 791, 1005, 1407
BciVI	GTATCC	1 cut(s)	1099
BcnI	CCSGG	1 cut(s)	140
BcoDI	GTCTC	6 cut(s)	229, 485, 525, 950, 1137, 1415
BfaI	CTAG	4 cut(s)	512, 1020, 1230, 1506
BfmI	CTRYAG	5 cut(s)	264, 484, 681, 1170, 1627
BfoI	RGCGCY	1 cut(s)	1060
BfrI	CTTAAG	1 cut(s)	871
BfuAI	ACCTGC	2 cut(s)	764, 1205
BfuI	GTATCC	1 cut(s)	1099
BglI	GCCNNNNNGGC	1 cut(s)	140
BglII	AGATCT	1 cut(s)	508
BmcAI	AGTACT	1 cut(s)	69
Bme1390I	CCNGG	7 cut(s)	76, 140, 411, 628, 791, 1005, 1407
Bme18I	GGWCC	3 cut(s)	367, 1217, 1381
BmgBI	CACGTC	2 cut(s)	271, 1711
BmgT120I	GGNCC	3 cut(s)	367, 1217, 1381
BmiI	GGNNCC	6 cut(s)	80, 600, 657, 778, 1058, 1564
BmrFI	CCNGG	7 cut(s)	76, 140, 411, 628, 791, 1005, 1407
BmsI	GCATC	4 cut(s)	776, 1075, 1464, 1471
BpiI	GAAGAC	1 cut(s)	752
BpmI	CTGGAG	2 cut(s)	144, 1724
Bpu10I	CCTNAGC	1 cut(s)	1426
BpuEI	CTTGAG	3 cut(s)	433, 737, 932
BpuMI	CCSGG	1 cut(s)	140
Bsa29I	ATCGAT	1 cut(s)	1356
BsaHI	GRCGYC	1 cut(s)	1057
BsaI	GGTCTC	1 cut(s)	1415
BsaJI	CCNNGG	9 cut(s)	409, 626, 766, 781, 1207, 1377, 1405, 1558, 1567
Bsc4I	CCNNNNNNNGG	2 cut(s)	1004, 1378
Bse1I	ACTGG	2 cut(s)	248, 1720
Bse3DI	GCAATG	2 cut(s)	1342, 1394
BseBI	CCWGG	6 cut(s)	76, 411, 628, 791, 1005, 1407
BseCI	ATCGAT	1 cut(s)	1356
BseDI	CCNNGG	9 cut(s)	409, 626, 766, 781, 1207, 1377, 1405, 1558, 1567
BseGI	GGATG	6 cut(s)	563, 791, 1009, 1455, 1690, 1771
BseLI	CCNNNNNNNGG	2 cut(s)	1004, 1378
BseMI	GCAATG	2 cut(s)	1342, 1394
BseMII	CTCAG	3 cut(s)	1268, 1440, 1620
BseNI	ACTGG	2 cut(s)	248, 1720
BseRI	GAGGAG	2 cut(s)	224, 1594
BseSI	GKGCMC	1 cut(s)	1314
BseXI	GCAGC	9 cut(s)	197, 667, 944, 1113, 1184, 1236, 1240, 1613, 1641
Bsh1236I	CGCG	1 cut(s)	249
BshFI	GGCC	2 cut(s)	418, 1599
BshNI	GGYRCC	2 cut(s)	776, 1056
BshVI	ATCGAT	1 cut(s)	1356
BsiHKAI	GWGCWC	1 cut(s)	1446
BsiSI	CCGG	1 cut(s)	140
BslFI	GGGAC	1 cut(s)	1786
BslI	CCNNNNNNNGG	2 cut(s)	1004, 1378
BsmAI	GTCTC	6 cut(s)	229, 485, 525, 950, 1137, 1415
BsmBI	CGTCTC	1 cut(s)	1137
BsmFI	GGGAC	1 cut(s)	1786
BsnI	GGCC	2 cut(s)	418, 1599
Bso31I	GGTCTC	1 cut(s)	1415
Bsp1286I	GDGCHC	2 cut(s)	1314, 1446
Bsp143I	GATC	4 cut(s)	154, 508, 655, 1273
Bsp19I	CCATGG	1 cut(s)	1207
BspACI	CCGC	4 cut(s)	249, 419, 963, 1372
BspANI	GGCC	2 cut(s)	418, 1599
BspCNI	CTCAG	3 cut(s)	1269, 1439, 1619
BspDI	ATCGAT	1 cut(s)	1356
BspFNI	CGCG	1 cut(s)	249
BspHI	TCATGA	1 cut(s)	1081
BspLI	GGNNCC	6 cut(s)	80, 600, 657, 778, 1058, 1564
BspMAI	CTGCAG	3 cut(s)	685, 1174, 1631
BspMI	ACCTGC	2 cut(s)	764, 1205
BspPI	GGATC	3 cut(s)	149, 650, 663
BspQI	GCTCTTC	1 cut(s)	1023
BspT107I	GGYRCC	2 cut(s)	776, 1056
BspTI	CTTAAG	1 cut(s)	871
BspTNI	GGTCTC	1 cut(s)	1415
BsrDI	GCAATG	2 cut(s)	1342, 1394
BsrI	ACTGG	2 cut(s)	248, 1720
BssECI	CCNNGG	9 cut(s)	409, 626, 766, 781, 1207, 1377, 1405, 1558, 1567
BssMI	GATC	4 cut(s)	154, 508, 655, 1273
BssNAI	GTATAC	1 cut(s)	888
BssNI	GRCGYC	1 cut(s)	1057
BssSI	CACGAG	1 cut(s)	495
BssT1I	CCWWGG	5 cut(s)	766, 781, 1207, 1377, 1567
Bst1107I	GTATAC	1 cut(s)	888
Bst2BI	CACGAG	1 cut(s)	495
Bst2UI	CCWGG	6 cut(s)	76, 411, 628, 791, 1005, 1407
Bst4CI	ACNGT	6 cut(s)	316, 547, 902, 1396, 1575, 1613
Bst6I	CTCTTC	2 cut(s)	1023, 1140
BstACI	GRCGYC	1 cut(s)	1057
BstAFI	CTTAAG	1 cut(s)	871
BstAPI	GCANNNNNTGC	2 cut(s)	1039, 1623
BstC8I	GCNNGC	5 cut(s)	435, 714, 799, 803, 1624
BstDEI	CTNAG	4 cut(s)	1277, 1426, 1447, 1606
BstDSI	CCRYGG	2 cut(s)	1207, 1558
BstF5I	GGATG	6 cut(s)	563, 791, 1009, 1455, 1690, 1771
BstFNI	CGCG	1 cut(s)	249
BstH2I	RGCGCY	1 cut(s)	1060
BstHHI	GCGC	5 cut(s)	249, 439, 1059, 1206, 1351
BstKTI	GATC	4 cut(s)	157, 511, 658, 1276
BstMAI	GTCTC	6 cut(s)	229, 485, 525, 950, 1137, 1415
BstMBI	GATC	4 cut(s)	154, 508, 655, 1273
BstNI	CCWGG	6 cut(s)	76, 411, 628, 791, 1005, 1407
BstNSI	RCATGY	2 cut(s)	311, 805
BstSCI	CCNGG	7 cut(s)	74, 138, 409, 626, 789, 1003, 1405
BstSFI	CTRYAG	5 cut(s)	264, 484, 681, 1170, 1627
BstSLI	GKGCMC	1 cut(s)	1314
BstUI	CGCG	1 cut(s)	249
BstV1I	GCAGC	9 cut(s)	197, 667, 944, 1113, 1184, 1236, 1240, 1613, 1641
BstV2I	GAAGAC	1 cut(s)	752
BstX2I	RGATCY	2 cut(s)	508, 655
BstXI	CCANNNNNNTGG	1 cut(s)	1702
BstYI	RGATCY	2 cut(s)	508, 655
BstZ17I	GTATAC	1 cut(s)	888
Bsu15I	ATCGAT	1 cut(s)	1356
BsuI	GTATCC	1 cut(s)	1099
BsuRI	GGCC	2 cut(s)	418, 1599
BsuTUI	ATCGAT	1 cut(s)	1356
BtgI	CCRYGG	2 cut(s)	1207, 1558
BtrI	CACGTC	2 cut(s)	271, 1711
BtsCI	GGATG	6 cut(s)	563, 791, 1009, 1455, 1690, 1771
BtsI	GCAGTG	2 cut(s)	594, 1528
BtsIMutI	CAGTG	4 cut(s)	594, 1269, 1392, 1528
BveI	ACCTGC	2 cut(s)	764, 1205
Cac8I	GCNNGC	5 cut(s)	435, 714, 799, 803, 1624
CaiI	CAGNNNCTG	2 cut(s)	221, 1745
CciI	TCATGA	1 cut(s)	1081
CfoI	GCGC	5 cut(s)	249, 439, 1059, 1206, 1351
Cfr13I	GGNCC	3 cut(s)	367, 1217, 1381
ClaI	ATCGAT	1 cut(s)	1356
Csp6I	GTAC	3 cut(s)	68, 777, 1289
CviAII	CATG	8 cut(s)	308, 390, 802, 988, 1064, 1082, 1208, 1221
CviQI	GTAC	3 cut(s)	68, 777, 1289
DdeI	CTNAG	4 cut(s)	1277, 1426, 1447, 1606
DinI	GGCGCC	1 cut(s)	1058
DpnI	GATC	4 cut(s)	156, 510, 657, 1275
DpnII	GATC	4 cut(s)	154, 508, 655, 1273
DraI	TTTAAA	2 cut(s)	327, 922
EaeI	YGGCCR	1 cut(s)	416
Eam1104I	CTCTTC	2 cut(s)	1023, 1140
EarI	CTCTTC	2 cut(s)	1023, 1140
Ecl136II	GAGCTC	1 cut(s)	1444
Eco130I	CCWWGG	5 cut(s)	766, 781, 1207, 1377, 1567
Eco24I	GRGCYC	1 cut(s)	1446
Eco31I	GGTCTC	1 cut(s)	1415
Eco47I	GGWCC	3 cut(s)	367, 1217, 1381
Eco53kI	GAGCTC	1 cut(s)	1444
EcoICRI	GAGCTC	1 cut(s)	1444
EcoO109I	RGGNCCY	1 cut(s)	367
EcoRII	CCWGG	6 cut(s)	74, 409, 626, 789, 1003, 1405
EcoT14I	CCWWGG	5 cut(s)	766, 781, 1207, 1377, 1567
EcoT38I	GRGCYC	1 cut(s)	1446
EgeI	GGCGCC	1 cut(s)	1058
EheI	GGCGCC	1 cut(s)	1058
ErhI	CCWWGG	5 cut(s)	766, 781, 1207, 1377, 1567
Esp3I	CGTCTC	1 cut(s)	1137
FaeI	CATG	8 cut(s)	311, 393, 805, 991, 1067, 1085, 1211, 1224
FalI	AAGNNNNNCTT	2 cut(s)	340, 372
FaqI	GGGAC	1 cut(s)	1786
FatI	CATG	8 cut(s)	307, 389, 801, 987, 1063, 1081, 1207, 1220
FauI	CCCGC	1 cut(s)	970
FblI	GTMKAC	1 cut(s)	887
FokI	GGATG	6 cut(s)	570, 798, 996, 1442, 1677, 1778
FriOI	GRGCYC	1 cut(s)	1446
FspBI	CTAG	4 cut(s)	512, 1020, 1230, 1506
GlaI	GCGC	5 cut(s)	248, 438, 1058, 1205, 1350
GsuI	CTGGAG	2 cut(s)	144, 1724
HaeII	RGCGCY	1 cut(s)	1060
HaeIII	GGCC	2 cut(s)	418, 1599
HapII	CCGG	1 cut(s)	140
HhaI	GCGC	5 cut(s)	249, 439, 1059, 1206, 1351
Hin1I	GRCGYC	1 cut(s)	1057
Hin1II	CATG	8 cut(s)	311, 393, 805, 991, 1067, 1085, 1211, 1224
Hin6I	GCGC	5 cut(s)	247, 437, 1057, 1204, 1349
HinP1I	GCGC	5 cut(s)	247, 437, 1057, 1204, 1349
HincII	GTYRAC	2 cut(s)	841, 1101
HindII	GTYRAC	2 cut(s)	841, 1101
HindIII	AAGCTT	1 cut(s)	48
HinfI	GANTC	6 cut(s)	218, 296, 493, 647, 1076, 1358
HpaI	GTTAAC	1 cut(s)	1101
HpaII	CCGG	1 cut(s)	140
HphI	GGTGA	3 cut(s)	926, 1457, 1502
Hpy166II	GTNNAC	3 cut(s)	841, 888, 1101
Hpy188I	TCNGA	8 cut(s)	21, 39, 363, 426, 1278, 1609, 1645, 1653
Hpy188III	TCNNGA	4 cut(s)	450, 949, 1082, 1703
Hpy8I	GTNNAC	3 cut(s)	841, 888, 1101
HpyAV	CCTTC	4 cut(s)	145, 358, 732, 1481
HpyCH4III	ACNGT	6 cut(s)	316, 547, 902, 1396, 1575, 1613
HpyCH4IV	ACGT	2 cut(s)	270, 1710
HpyF3I	CTNAG	4 cut(s)	1277, 1426, 1447, 1606
HpySE526I	ACGT	2 cut(s)	270, 1710
Hsp92I	GRCGYC	1 cut(s)	1057
Hsp92II	CATG	8 cut(s)	311, 393, 805, 991, 1067, 1085, 1211, 1224
HspAI	GCGC	5 cut(s)	247, 437, 1057, 1204, 1349
KasI	GGCGCC	1 cut(s)	1056
KpnI	GGTACC	1 cut(s)	780
KspAI	GTTAAC	1 cut(s)	1101
Kzo9I	GATC	4 cut(s)	154, 508, 655, 1273
LguI	GCTCTTC	1 cut(s)	1023
LmnI	GCTCC	4 cut(s)	114, 770, 1211, 1420
Lsp1109I	GCAGC	9 cut(s)	197, 667, 944, 1113, 1184, 1236, 1240, 1613, 1641
LweI	GCATC	4 cut(s)	776, 1075, 1464, 1471
MaeI	CTAG	4 cut(s)	512, 1020, 1230, 1506
MaeII	ACGT	2 cut(s)	270, 1710
MaeIII	GTNAC	3 cut(s)	1325, 1396, 1711
MalI	GATC	4 cut(s)	156, 510, 657, 1275
MboI	GATC	4 cut(s)	154, 508, 655, 1273
MboII	GAAGA	4 cut(s)	345, 752, 1040, 1127
MflI	RGATCY	2 cut(s)	508, 655
MhlI	GDGCHC	2 cut(s)	1314, 1446
Mly113I	GGCGCC	1 cut(s)	1057
MlyI	GAGTC	1 cut(s)	487
MmeI	TCCRAC	1 cut(s)	683
MslI	CAYNNNNRTG	3 cut(s)	806, 1470, 1637
MspA1I	CMGCKG	1 cut(s)	965
MspCI	CTTAAG	1 cut(s)	871
MspI	CCGG	1 cut(s)	140
MspR9I	CCNGG	7 cut(s)	76, 140, 411, 628, 791, 1005, 1407
MvaI	CCWGG	6 cut(s)	76, 411, 628, 791, 1005, 1407
MvnI	CGCG	1 cut(s)	249
NarI	GGCGCC	1 cut(s)	1057
NciI	CCSGG	1 cut(s)	140
NcoI	CCATGG	1 cut(s)	1207
NdeII	GATC	4 cut(s)	154, 508, 655, 1273
NlaIII	CATG	8 cut(s)	311, 393, 805, 991, 1067, 1085, 1211, 1224
NlaIV	GGNNCC	6 cut(s)	80, 600, 657, 778, 1058, 1564
NmuCI	GTSAC	1 cut(s)	1711
NspI	RCATGY	2 cut(s)	311, 805
PaeI	GCATGC	1 cut(s)	805
PagI	TCATGA	1 cut(s)	1081
PciSI	GCTCTTC	1 cut(s)	1023
PfeI	GAWTC	5 cut(s)	218, 296, 647, 1076, 1358
PflMI	CCANNNNNTGG	1 cut(s)	1004
PleI	GAGTC	1 cut(s)	487
PluTI	GGCGCC	1 cut(s)	1060
PpsI	GAGTC	1 cut(s)	487
PpuMI	RGGWCCY	1 cut(s)	367
Psp124BI	GAGCTC	1 cut(s)	1446
Psp5II	RGGWCCY	1 cut(s)	367
Psp6I	CCWGG	6 cut(s)	74, 409, 626, 789, 1003, 1405
PspGI	CCWGG	6 cut(s)	74, 409, 626, 789, 1003, 1405
PspN4I	GGNNCC	6 cut(s)	80, 600, 657, 778, 1058, 1564
PspPI	GGNCC	3 cut(s)	367, 1217, 1381
PspPPI	RGGWCCY	1 cut(s)	367
PstI	CTGCAG	3 cut(s)	685, 1174, 1631
PstNI	CAGNNNCTG	2 cut(s)	221, 1745
PsuI	RGATCY	2 cut(s)	508, 655
RsaI	GTAC	3 cut(s)	69, 778, 1290
RsaNI	GTAC	3 cut(s)	68, 777, 1289
RseI	CAYNNNNRTG	3 cut(s)	806, 1470, 1637
SacI	GAGCTC	1 cut(s)	1446
SapI	GCTCTTC	1 cut(s)	1023
Sau3AI	GATC	4 cut(s)	154, 508, 655, 1273
Sau96I	GGNCC	3 cut(s)	367, 1217, 1381
ScaI	AGTACT	1 cut(s)	69
SchI	GAGTC	1 cut(s)	487
ScrFI	CCNGG	7 cut(s)	76, 140, 411, 628, 791, 1005, 1407
SduI	GDGCHC	2 cut(s)	1314, 1446
SfaNI	GCATC	4 cut(s)	776, 1075, 1464, 1471
SfcI	CTRYAG	5 cut(s)	264, 484, 681, 1170, 1627
SfoI	GGCGCC	1 cut(s)	1058
SinI	GGWCC	3 cut(s)	367, 1217, 1381
SmiMI	CAYNNNNRTG	3 cut(s)	806, 1470, 1637
SmlI	CTYRAG	4 cut(s)	448, 752, 871, 947
SmoI	CTYRAG	4 cut(s)	448, 752, 871, 947
SphI	GCATGC	1 cut(s)	805
SsiI	CCGC	4 cut(s)	249, 419, 963, 1372
SspDI	GGCGCC	1 cut(s)	1056
SspI	AATATT	1 cut(s)	957
SspMI	CTAG	4 cut(s)	512, 1020, 1230, 1506
SstI	GAGCTC	1 cut(s)	1446
StyD4I	CCNGG	7 cut(s)	74, 138, 409, 626, 789, 1003, 1405
StyI	CCWWGG	5 cut(s)	766, 781, 1207, 1377, 1567
TaaI	ACNGT	6 cut(s)	316, 547, 902, 1396, 1575, 1613
TaiI	ACGT	2 cut(s)	273, 1713
TaqI	TCGA	1 cut(s)	1356
TatI	WGTACW	2 cut(s)	67, 1288
TauI	GCSGC	2 cut(s)	252, 421
TfiI	GAWTC	5 cut(s)	218, 296, 647, 1076, 1358
TscAI	CASTG	4 cut(s)	594, 1276, 1399, 1528
TseFI	GTSAC	1 cut(s)	1711
TseI	GCWGC	9 cut(s)	185, 680, 932, 1126, 1172, 1224, 1253, 1626, 1629
Tsp45I	GTSAC	1 cut(s)	1711
TspDTI	ATGAA	2 cut(s)	110, 1748
TspGWI	ACGGA	2 cut(s)	1118, 1547
TspRI	CASTG	4 cut(s)	594, 1276, 1399, 1528
Van91I	CCANNNNNTGG	1 cut(s)	1004
Vha464I	CTTAAG	1 cut(s)	871
VpaK11BI	GGWCC	3 cut(s)	367, 1217, 1381
XapI	RAATTY	5 cut(s)	301, 691, 736, 917, 1667
XceI	RCATGY	2 cut(s)	311, 805
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1375, 1556
XmiI	GTMKAC	1 cut(s)	887
XspI	CTAG	4 cut(s)	512, 1020, 1230, 1506
ZrmI	AGTACT	1 cut(s)	69

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.