Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0012217

Physical Location & Seq

Genomic Coordinates Forward (+)

2863160 .. 2868234

Gene Structure 5075 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G060100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGAGGGGAGCAGTGGCAAATCCATACTTCAATTCGCACCGTTTCAGAGCTCGGTGGACGAGGGTTTCTGGCACAGACTGTCTTCATTGAAGCTCAACAAGTTTGGCATCGATGACTCTCCCATTCCCATCACTGGTTTCTATGCACCGTGCTCACATTCTCAAGTATCAAATCATTTAACTCTTCTAGCTGAGTCTTTGCCTTCGGATTCAAGTGAAGAATCAGAGGTACCAGAAATAAGTCGAGGGAATAGGAACAGATGCTCCGTCCCTGGCATCCTTTACAACACCAATACGGTAGAAAGGTTTCATGGACTTGACAAACAGGGCTTACTTAAGGCAGAAGCACAAAAGATTTGGGAGGACATCCATAATGGAAGAGCTTTGGAGGACAGTTCAGTACTTTCCAGGTTCCTCCTTATCTCTTTTGCAGACCTGAAAAAATGGAGCTTTCATTACTGGTTTGCTTTTCCTGCTCTGGTGCTTGATCCTCCAGCAACCTTGGTTAATTTGAGGCCAGCTTCACAATGTTTTAGCTTGGAGGAGGCGGAATCTCTTTCAGCAGCATTTAATGAGTGGCGTAACTCAAGCTTAACAGCAGATGTGCCCTTCTTTTTGGTCCAAATTGATACAAATTCACACGCTGCTATTAAGCATCTAAAGGATTGGGAAACCTGCCAAAGTGCTGATGGTCACAAGTTACTATTTGGATTTTACGATCCATGCCATCTTCCAAACAATCCTGGTTGGCCTCTTCGCAACTTCCTTGCCCTTATTTGCTCAAGATGGGATATAAAGTCTGTTCACTTTTTATGCTATAGAGAGAATCGTGGTTTCGCAGATCTGGGATTGTCCCTTGTTGGTGAAGCTCTGATTACAGTTCCACAAGGATGGAGGGATCATCCTTATGTACCTAATGCAGTGGGGTGGGAACTTAACAAAGGGAGAAAAATACCCAGGGGTATTAGCCTGGCTAAATCTATGGATCCAACTAGGTTGGCCATATCTGCTGCAGATTTGAATTTGAAACTAATGAGATGGCGTGCTTTGCCTTCTCTGAACTTAAATAGCTTGTCTTCTCTCAAGTGTCTCCTCCTTGGAGCAGGTACACTTGGATGCCAGGTTGCTCGCACGCTTATGGCTTGGGGTGTCCGCAGAATTACGTTGGTTGACAATGGCAGGGTGGCTATGTCAAATCCATTGAGGCAATCCCTGTATACATTAGATGATTGCCTAAATGGTGGTGAGCTTAAAGCTACAGCAGCAGTTAATAGTCTCAAGAGAATATTTCCAGCTGTGGAAGCAAAGGGTGTTGTCATGGCTATACCAATGCCTGGACATCCTGTTCCTAGTCAAGAAGAGCAGACTGTGCTTGATGATTGTCGATCCCTACATGATTTAATTGATTCTCATGATGTAGTTTTCTTGTTGACTGATACAAGAGAAAGTCGGTGGCTACCATCTCTTCTTTGTGCAAATACTAACAAGATTACTATAACTGCAGCTTTAGGATTTGATAGCTTCTTGGTTATGCGCCATGGAGCAGGTCCTTTTAGCTCTAGCCACGACTCAAAAGCTGAAGCTGCAAATTCTTTATCTGCTGATATGAGCAACCTTGGCCTGACTGATAGAGATGGAGGGAAGAGATTGGGCTGTTACTTCTGCAATGATGTGGTTGCGCCTATCGATTCAACTTCAAACCGCACACTGGACCAGCAATGTACTGTTACACGCCCAGGCCTTGCTCCTATTGCCTCAGCTCTTGCAGTTGAGCTCTTAGTAGGAATTCTGCATCACCCTCACGGGATATTTGCGGAAGGTGATGTTTTAAACTCCAGTAATAGTGAAAGCAGTGAGCAGCCTCTTGGTATTTTACCCCATCAAATTCGAGGTTCCCTCGCACAGTTTTCACAGATGACACTTGTGGGCCACTCCTCAGACAGTTGTACGGCTTGTTGCAGCACTGTGGTGTCTGAATATCGGAAAAAGGGAATGGAATTTATACTGCAAGCAATCAACCACCCCACCTATCTGGAGGACCTAACTGGACTGACGGAGTTGATGAAATCAGCTAGTTCATTCGAATTGGACTGGGATGATGGAACGGATGAAGATGATGATGATTGCGTTGAAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006501 GO:0006807 GO:0006914 GO:0006950 GO:0006952 GO:0006995 GO:0006996 GO:0007005 GO:0007033 GO:0007154 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008641 GO:0009056 GO:0009058 GO:0009059 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0009991 GO:0010150 GO:0016043 GO:0016236 GO:0016237 GO:0016740 GO:0016874 GO:0016877 GO:0018410 GO:0019538 GO:0019778 GO:0019779 GO:0022411 GO:0022607 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0034645 GO:0034727 GO:0036211 GO:0042157 GO:0042158 GO:0042594 GO:0043170 GO:0043207 GO:0043412 GO:0043562 GO:0043687 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044804 GO:0044805 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0061726 GO:0061919 GO:0070925 GO:0071496 GO:0071704 GO:0071840 GO:0090693 GO:0098542 GO:0099402 GO:1901564 GO:1901566 GO:1901576 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 ko04216 map04136 map04138 map04140 map04216

Pfam Domains

Protein Families

ATG7_N ThiF

Protein Analysis

713

Amino Acids

78.21

Weight (kDa)

5.49

Isoelectric Point (pI)

43.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45900
fragaria_vesca	FvH4_3g07910
malus_domestica	MD05G1302300.v1.1 MD10G1281000.v1.1
prunus_persica	Prupe.4G060100_v2.0.a1 Prupe.4G060100_v2.0.a1 Prupe.4G060100_v2.0.a1
pyrus_communis	pycom05g27990 pycom10g23460
rosa_chinensis	RchiOBHm_Chr5g0010641
rosa_laevigata	RLG00000031768
rosa_multiflora	Rmu_sc0006103.1_g000002 Rmu_sc0014635.1_g000003
rosa_roxburghii	Rroxscaffold_1G00065730
rosa_rugosa	Rorug04G0451400.1
rosa_samantha	Rh5AG083000 Rh5CG091000
rosa_wichuraiana	Rw0G000680 Rw0G021850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	683, 1094, 1535
Acc65I	GGTACC	1 cut(s)	229
AccB1I	GGYRCC	1 cut(s)	229
AccB7I	CCANNNNNTGG	1 cut(s)	1334
AccI	GTMKAC	1 cut(s)	1217
AciI	CCGC	4 cut(s)	548, 1153, 1702, 1814
AclWI	GGATC	6 cut(s)	482, 713, 906, 980, 993, 1380
AcoI	YGGCCR	1 cut(s)	999
AcsI	RAATTY	6 cut(s)	634, 1021, 1588, 1785, 1884, 1997
AcuI	CTGAAG	1 cut(s)	1599
AfaI	GTAC	6 cut(s)	231, 402, 912, 1108, 1723, 1948
AfiI	CCNNNNNNNGG	3 cut(s)	134, 1334, 1708
AflII	CTTAAG	1 cut(s)	335
AgsI	TTSAA	8 cut(s)	32, 91, 213, 1021, 1027, 1692, 1698, 2132
AjnI	CCWGG	8 cut(s)	271, 407, 742, 956, 969, 1119, 1333, 1735
AleI	CACNNNNGTG	1 cut(s)	1967
AloI	GAACNNNNNNTCC	4 cut(s)	248, 280, 1329, 1361
Alw21I	GWGCWC	3 cut(s)	53, 155, 1776
Alw26I	GTCTC	2 cut(s)	1094, 1280
AlwI	GGATC	6 cut(s)	482, 713, 906, 980, 993, 1380
AoxI	GGCC	6 cut(s)	515, 749, 999, 1618, 1738, 1927
ApeKI	GCWGC	8 cut(s)	563, 644, 1010, 1262, 1502, 1583, 1858, 1959
ApoI	RAATTY	6 cut(s)	634, 1021, 1588, 1785, 1884, 1997
Asp700I	GAANNNNTTC	1 cut(s)	306
Asp718I	GGTACC	1 cut(s)	229
AspLEI	GCGC	2 cut(s)	1536, 1681
AspS9I	GGNCC	5 cut(s)	619, 1547, 1711, 1927, 2038
AsuHPI	GGTGA	4 cut(s)	875, 1256, 1787, 1832
AsuII	TTCGAA	1 cut(s)	2082
AvaII	GGWCC	4 cut(s)	619, 1547, 1711, 2038
BaeGI	GKGCMC	1 cut(s)	609
BalI	TGGCCA	1 cut(s)	1001
BamHI	GGATCC	1 cut(s)	985
BanI	GGYRCC	1 cut(s)	229
BanII	GRGCYC	2 cut(s)	53, 1776
BbsI	GAAGAC	2 cut(s)	75, 1068
Bbv12I	GWGCWC	3 cut(s)	53, 155, 1776
BbvCI	CCTCAGC	1 cut(s)	1756
BbvI	GCAGC	8 cut(s)	575, 631, 997, 1274, 1514, 1570, 1870, 1971
BceAI	ACGGC	1 cut(s)	1965
BciT130I	CCWGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
BcoDI	GTCTC	2 cut(s)	1094, 1280
BfaI	CTAG	5 cut(s)	188, 993, 1350, 1560, 2073
BfmI	CTRYAG	4 cut(s)	817, 1011, 1257, 1500
BfrI	CTTAAG	1 cut(s)	335
BfuAI	ACCTGC	3 cut(s)	683, 1094, 1535
BglII	AGATCT	1 cut(s)	841
BisI	GCNGC	8 cut(s)	564, 645, 1011, 1263, 1503, 1584, 1859, 1960
BlsI	GCNGC	8 cut(s)	565, 646, 1012, 1264, 1504, 1585, 1860, 1961
BmcAI	AGTACT	1 cut(s)	402
Bme1390I	CCNGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
Bme18I	GGWCC	4 cut(s)	619, 1547, 1711, 2038
BmgT120I	GGNCC	5 cut(s)	619, 1547, 1711, 1927, 2038
BmiI	GGNNCC	4 cut(s)	231, 413, 987, 1894
BmrFI	CCNGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
BmrI	ACTGGG	1 cut(s)	2101
BmsI	GCATC	6 cut(s)	117, 251, 285, 664, 1106, 1801
BmuI	ACTGGG	1 cut(s)	2101
BpiI	GAAGAC	2 cut(s)	75, 1068
BplI	GAGNNNNNCTC	2 cut(s)	1881, 1913
BpmI	CTGGAG	3 cut(s)	477, 1819, 2054
Bpu10I	CCTNAGC	1 cut(s)	1756
Bpu14I	TTCGAA	1 cut(s)	2082
BpuEI	CTTGAG	5 cut(s)	147, 571, 766, 1067, 1262
Bsa29I	ATCGAT	2 cut(s)	111, 1686
BsaJI	CCNNGG	8 cut(s)	271, 501, 956, 957, 1096, 1537, 1615, 1735
BsaXI	ACNNNNNCTCC	2 cut(s)	248, 278
Bsc4I	CCNNNNNNNGG	3 cut(s)	134, 1334, 1708
Bse1I	ACTGG	6 cut(s)	139, 464, 1713, 1836, 2050, 2096
Bse3DI	GCAATG	2 cut(s)	1672, 1724
BseBI	CCWGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
BseCI	ATCGAT	2 cut(s)	111, 1686
BseDI	CCNNGG	8 cut(s)	271, 501, 956, 957, 1096, 1537, 1615, 1735
BseGI	GGATG	8 cut(s)	276, 366, 896, 901, 1121, 1339, 2101, 2113
BseLI	CCNNNNNNNGG	3 cut(s)	134, 1334, 1708
BseMI	GCAATG	2 cut(s)	1672, 1724
BseMII	CTCAG	3 cut(s)	183, 1770, 1950
BseNI	ACTGG	6 cut(s)	139, 464, 1713, 1836, 2050, 2096
BseRI	GAGGAG	3 cut(s)	557, 1082, 1924
BseSI	GKGCMC	1 cut(s)	609
BseXI	GCAGC	8 cut(s)	575, 631, 997, 1274, 1514, 1570, 1870, 1971
BshFI	GGCC	6 cut(s)	517, 751, 1001, 1620, 1740, 1929
BshNI	GGYRCC	1 cut(s)	229
BshVI	ATCGAT	2 cut(s)	111, 1686
BsiHKAI	GWGCWC	3 cut(s)	53, 155, 1776
BslFI	GGGAC	2 cut(s)	254, 838
BslI	CCNNNNNNNGG	3 cut(s)	134, 1334, 1708
BsmAI	GTCTC	2 cut(s)	1094, 1280
BsmFI	GGGAC	2 cut(s)	254, 838
BsnI	GGCC	6 cut(s)	517, 751, 1001, 1620, 1740, 1929
Bsp119I	TTCGAA	1 cut(s)	2082
Bsp1286I	GDGCHC	4 cut(s)	53, 155, 609, 1776
Bsp143I	GATC	6 cut(s)	487, 718, 841, 898, 985, 1385
Bsp19I	CCATGG	1 cut(s)	1537
BspACI	CCGC	4 cut(s)	548, 1153, 1702, 1814
BspANI	GGCC	6 cut(s)	517, 751, 1001, 1620, 1740, 1929
BspCNI	CTCAG	3 cut(s)	184, 1769, 1949
BspDI	ATCGAT	2 cut(s)	111, 1686
BspHI	TCATGA	1 cut(s)	1411
BspLI	GGNNCC	4 cut(s)	231, 413, 987, 1894
BspMAI	CTGCAG	2 cut(s)	1015, 1504
BspMI	ACCTGC	3 cut(s)	683, 1094, 1535
BspPI	GGATC	6 cut(s)	482, 713, 906, 980, 993, 1380
BspQI	GCTCTTC	2 cut(s)	373, 1353
BspT104I	TTCGAA	1 cut(s)	2082
BspT107I	GGYRCC	1 cut(s)	229
BspTI	CTTAAG	1 cut(s)	335
BsrDI	GCAATG	2 cut(s)	1672, 1724
BsrI	ACTGG	6 cut(s)	139, 464, 1713, 1836, 2050, 2096
BssECI	CCNNGG	8 cut(s)	271, 501, 956, 957, 1096, 1537, 1615, 1735
BssMI	GATC	6 cut(s)	487, 718, 841, 898, 985, 1385
BssNAI	GTATAC	1 cut(s)	1218
BssT1I	CCWWGG	4 cut(s)	501, 1096, 1537, 1615
Bst1107I	GTATAC	1 cut(s)	1218
Bst2UI	CCWGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
Bst6I	CTCTTC	6 cut(s)	189, 373, 759, 1353, 1470, 1637
BstAFI	CTTAAG	1 cut(s)	335
BstAPI	GCANNNNNTGC	1 cut(s)	1369
BstBI	TTCGAA	1 cut(s)	2082
BstC8I	GCNNGC	5 cut(s)	519, 1044, 1129, 1133, 2010
BstDEI	CTNAG	4 cut(s)	192, 1756, 1777, 1936
BstDSI	CCRYGG	1 cut(s)	1537
BstF5I	GGATG	8 cut(s)	276, 366, 896, 901, 1121, 1339, 2101, 2113
BstHHI	GCGC	2 cut(s)	1536, 1681
BstKTI	GATC	6 cut(s)	490, 721, 844, 901, 988, 1388
BstMAI	GTCTC	2 cut(s)	1094, 1280
BstMBI	GATC	6 cut(s)	487, 718, 841, 898, 985, 1385
BstMWI	GCNNNNNNNGC	9 cut(s)	473, 1007, 1048, 1262, 1301, 1369, 1583, 1617, 1751
BstNI	CCWGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
BstSCI	CCNGG	8 cut(s)	271, 407, 742, 956, 969, 1119, 1333, 1735
BstSFI	CTRYAG	4 cut(s)	817, 1011, 1257, 1500
BstSLI	GKGCMC	1 cut(s)	609
BstV1I	GCAGC	8 cut(s)	575, 631, 997, 1274, 1514, 1570, 1870, 1971
BstV2I	GAAGAC	2 cut(s)	75, 1068
BstX2I	RGATCY	2 cut(s)	841, 985
BstXI	CCANNNNNNTGG	2 cut(s)	891, 2032
BstYI	RGATCY	2 cut(s)	841, 985
BstZ17I	GTATAC	1 cut(s)	1218
Bsu15I	ATCGAT	2 cut(s)	111, 1686
BsuRI	GGCC	6 cut(s)	517, 751, 1001, 1620, 1740, 1929
BsuTUI	ATCGAT	2 cut(s)	111, 1686
BtgI	CCRYGG	1 cut(s)	1537
BtsCI	GGATG	8 cut(s)	276, 366, 896, 901, 1121, 1339, 2101, 2113
BtsI	GCAGTG	3 cut(s)	19, 927, 1858
BtsIMutI	CAGTG	6 cut(s)	19, 132, 927, 1706, 1858, 1962
BveI	ACCTGC	3 cut(s)	683, 1094, 1535
Cac8I	GCNNGC	5 cut(s)	519, 1044, 1129, 1133, 2010
CciI	TCATGA	1 cut(s)	1411
CfoI	GCGC	2 cut(s)	1536, 1681
Cfr13I	GGNCC	5 cut(s)	619, 1547, 1711, 1927, 2038
ClaI	ATCGAT	2 cut(s)	111, 1686
Csp6I	GTAC	6 cut(s)	230, 401, 911, 1107, 1722, 1947
CviAII	CATG	6 cut(s)	311, 723, 1318, 1394, 1412, 1538
CviQI	GTAC	6 cut(s)	230, 401, 911, 1107, 1722, 1947
DdeI	CTNAG	4 cut(s)	192, 1756, 1777, 1936
DpnI	GATC	6 cut(s)	489, 720, 843, 900, 987, 1387
DpnII	GATC	6 cut(s)	487, 718, 841, 898, 985, 1385
DraI	TTTAAA	1 cut(s)	1830
EaeI	YGGCCR	1 cut(s)	999
Eam1104I	CTCTTC	6 cut(s)	189, 373, 759, 1353, 1470, 1637
EarI	CTCTTC	6 cut(s)	189, 373, 759, 1353, 1470, 1637
EciI	GGCGGA	1 cut(s)	563
Ecl136II	GAGCTC	2 cut(s)	51, 1774
Eco130I	CCWWGG	4 cut(s)	501, 1096, 1537, 1615
Eco147I	AGGCCT	1 cut(s)	1740
Eco24I	GRGCYC	2 cut(s)	53, 1776
Eco47I	GGWCC	4 cut(s)	619, 1547, 1711, 2038
Eco53kI	GAGCTC	2 cut(s)	51, 1774
Eco57I	CTGAAG	1 cut(s)	1599
EcoICRI	GAGCTC	2 cut(s)	51, 1774
EcoO109I	RGGNCCY	2 cut(s)	1547, 2038
EcoRI	GAATTC	1 cut(s)	1785
EcoRII	CCWGG	8 cut(s)	271, 407, 742, 956, 969, 1119, 1333, 1735
EcoT14I	CCWWGG	4 cut(s)	501, 1096, 1537, 1615
EcoT38I	GRGCYC	2 cut(s)	53, 1776
ErhI	CCWWGG	4 cut(s)	501, 1096, 1537, 1615
FaeI	CATG	6 cut(s)	314, 726, 1321, 1397, 1415, 1541
FaqI	GGGAC	2 cut(s)	254, 838
FatI	CATG	6 cut(s)	310, 722, 1317, 1393, 1411, 1537
FblI	GTMKAC	1 cut(s)	1217
Fnu4HI	GCNGC	8 cut(s)	564, 645, 1011, 1263, 1503, 1584, 1859, 1960
FokI	GGATG	8 cut(s)	263, 353, 888, 903, 1128, 1326, 2108, 2120
FriOI	GRGCYC	2 cut(s)	53, 1776
Fsp4HI	GCNGC	8 cut(s)	564, 645, 1011, 1263, 1503, 1584, 1859, 1960
FspBI	CTAG	5 cut(s)	188, 993, 1350, 1560, 2073
GlaI	GCGC	2 cut(s)	1535, 1680
GluI	GCNGC	8 cut(s)	564, 645, 1011, 1263, 1503, 1584, 1859, 1960
GsuI	CTGGAG	3 cut(s)	477, 1819, 2054
HaeIII	GGCC	6 cut(s)	517, 751, 1001, 1620, 1740, 1929
HhaI	GCGC	2 cut(s)	1536, 1681
Hin1II	CATG	6 cut(s)	314, 726, 1321, 1397, 1415, 1541
Hin6I	GCGC	2 cut(s)	1534, 1679
HinP1I	GCGC	2 cut(s)	1534, 1679
HincII	GTYRAC	2 cut(s)	1171, 1431
HindII	GTYRAC	2 cut(s)	1171, 1431
HindIII	AAGCTT	1 cut(s)	589
HinfI	GANTC	9 cut(s)	116, 194, 209, 221, 551, 826, 1406, 1568, 1688
HphI	GGTGA	4 cut(s)	875, 1256, 1787, 1832
Hpy166II	GTNNAC	6 cut(s)	58, 805, 1109, 1171, 1218, 1431
Hpy188I	TCNGA	9 cut(s)	48, 208, 226, 873, 1059, 1939, 1975, 1983, 2138
Hpy188III	TCNNGA	5 cut(s)	783, 1279, 1355, 1412, 2033
Hpy8I	GTNNAC	6 cut(s)	58, 805, 1109, 1171, 1218, 1431
HpyAV	CCTTC	4 cut(s)	213, 619, 1062, 1811
HpyCH4IV	ACGT	1 cut(s)	1163
HpyF10VI	GCNNNNNNNGC	9 cut(s)	473, 1007, 1048, 1262, 1301, 1369, 1583, 1617, 1751
HpyF3I	CTNAG	4 cut(s)	192, 1756, 1777, 1936
HpySE526I	ACGT	1 cut(s)	1163
Hsp92II	CATG	6 cut(s)	314, 726, 1321, 1397, 1415, 1541
HspAI	GCGC	2 cut(s)	1534, 1679
KpnI	GGTACC	1 cut(s)	233
Kzo9I	GATC	6 cut(s)	487, 718, 841, 898, 985, 1385
LguI	GCTCTTC	2 cut(s)	373, 1353
LmnI	GCTCC	6 cut(s)	9, 269, 447, 1100, 1541, 1750
Lsp1109I	GCAGC	8 cut(s)	575, 631, 997, 1274, 1514, 1570, 1870, 1971
LweI	GCATC	6 cut(s)	117, 251, 285, 664, 1106, 1801
MaeI	CTAG	5 cut(s)	188, 993, 1350, 1560, 2073
MaeII	ACGT	1 cut(s)	1163
MaeIII	GTNAC	5 cut(s)	581, 692, 699, 1655, 1726
MalI	GATC	6 cut(s)	489, 720, 843, 900, 987, 1387
MboI	GATC	6 cut(s)	487, 718, 841, 898, 985, 1385
MflI	RGATCY	2 cut(s)	841, 985
MhlI	GDGCHC	4 cut(s)	53, 155, 609, 1776
MlsI	TGGCCA	1 cut(s)	1001
MluNI	TGGCCA	1 cut(s)	1001
MlyI	GAGTC	3 cut(s)	110, 203, 1562
MmeI	TCCRAC	1 cut(s)	1013
Mox20I	TGGCCA	1 cut(s)	1001
MroXI	GAANNNNTTC	1 cut(s)	306
MscI	TGGCCA	1 cut(s)	1001
MslI	CAYNNNNRTG	5 cut(s)	889, 906, 1114, 1136, 1967
Msp20I	TGGCCA	1 cut(s)	1001
MspA1I	CMGCKG	1 cut(s)	1295
MspCI	CTTAAG	1 cut(s)	335
MspR9I	CCNGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
MvaI	CCWGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
MwoI	GCNNNNNNNGC	9 cut(s)	473, 1007, 1048, 1262, 1301, 1369, 1583, 1617, 1751
NcoI	CCATGG	1 cut(s)	1537
NdeII	GATC	6 cut(s)	487, 718, 841, 898, 985, 1385
NlaIII	CATG	6 cut(s)	314, 726, 1321, 1397, 1415, 1541
NlaIV	GGNNCC	4 cut(s)	231, 413, 987, 1894
NmuCI	GTSAC	1 cut(s)	692
NspV	TTCGAA	1 cut(s)	2082
OliI	CACNNNNGTG	1 cut(s)	1967
PagI	TCATGA	1 cut(s)	1411
PasI	CCCWGGG	1 cut(s)	957
PceI	AGGCCT	1 cut(s)	1740
PciSI	GCTCTTC	2 cut(s)	373, 1353
PdmI	GAANNNNTTC	1 cut(s)	306
PfeI	GAWTC	6 cut(s)	209, 221, 551, 826, 1406, 1688
PflMI	CCANNNNNTGG	1 cut(s)	1334
PkrI	GCNGC	8 cut(s)	565, 646, 1012, 1264, 1504, 1585, 1860, 1961
PleI	GAGTC	3 cut(s)	110, 202, 1562
PpsI	GAGTC	3 cut(s)	110, 202, 1562
PpuMI	RGGWCCY	2 cut(s)	1547, 2038
Psp124BI	GAGCTC	2 cut(s)	53, 1776
Psp5II	RGGWCCY	2 cut(s)	1547, 2038
Psp6I	CCWGG	8 cut(s)	271, 407, 742, 956, 969, 1119, 1333, 1735
PspGI	CCWGG	8 cut(s)	271, 407, 742, 956, 969, 1119, 1333, 1735
PspN4I	GGNNCC	4 cut(s)	231, 413, 987, 1894
PspPI	GGNCC	5 cut(s)	619, 1547, 1711, 1927, 2038
PspPPI	RGGWCCY	2 cut(s)	1547, 2038
PstI	CTGCAG	2 cut(s)	1015, 1504
PsuI	RGATCY	2 cut(s)	841, 985
PvuII	CAGCTG	1 cut(s)	1295
RsaI	GTAC	6 cut(s)	231, 402, 912, 1108, 1723, 1948
RsaNI	GTAC	6 cut(s)	230, 401, 911, 1107, 1722, 1947
RseI	CAYNNNNRTG	5 cut(s)	889, 906, 1114, 1136, 1967
SacI	GAGCTC	2 cut(s)	53, 1776
SapI	GCTCTTC	2 cut(s)	373, 1353
SatI	GCNGC	8 cut(s)	564, 645, 1011, 1263, 1503, 1584, 1859, 1960
Sau3AI	GATC	6 cut(s)	487, 718, 841, 898, 985, 1385
Sau96I	GGNCC	5 cut(s)	619, 1547, 1711, 1927, 2038
ScaI	AGTACT	1 cut(s)	402
SchI	GAGTC	3 cut(s)	110, 203, 1562
ScrFI	CCNGG	8 cut(s)	273, 409, 744, 958, 971, 1121, 1335, 1737
SduI	GDGCHC	4 cut(s)	53, 155, 609, 1776
SfaNI	GCATC	6 cut(s)	117, 251, 285, 664, 1106, 1801
SfcI	CTRYAG	4 cut(s)	817, 1011, 1257, 1500
SfuI	TTCGAA	1 cut(s)	2082
SinI	GGWCC	4 cut(s)	619, 1547, 1711, 2038
SmiMI	CAYNNNNRTG	5 cut(s)	889, 906, 1114, 1136, 1967
SmlI	CTYRAG	6 cut(s)	162, 335, 586, 781, 1082, 1277
SmoI	CTYRAG	6 cut(s)	162, 335, 586, 781, 1082, 1277
SseBI	AGGCCT	1 cut(s)	1740
SsiI	CCGC	4 cut(s)	548, 1153, 1702, 1814
SspI	AATATT	1 cut(s)	1287
SspMI	CTAG	5 cut(s)	188, 993, 1350, 1560, 2073
SstI	GAGCTC	2 cut(s)	53, 1776
StuI	AGGCCT	1 cut(s)	1740
StyD4I	CCNGG	8 cut(s)	271, 407, 742, 956, 969, 1119, 1333, 1735
StyI	CCWWGG	4 cut(s)	501, 1096, 1537, 1615
TaiI	ACGT	1 cut(s)	1166
TaqI	TCGA	6 cut(s)	111, 244, 1384, 1686, 1888, 2082
TatI	WGTACW	2 cut(s)	400, 1721
TfiI	GAWTC	6 cut(s)	209, 221, 551, 826, 1406, 1688
TscAI	CASTG	6 cut(s)	19, 139, 927, 1713, 1858, 1969
TseFI	GTSAC	1 cut(s)	692
TseI	GCWGC	8 cut(s)	563, 644, 1010, 1262, 1502, 1583, 1858, 1959
Tsp45I	GTSAC	1 cut(s)	692
TspDTI	ATGAA	6 cut(s)	75, 299, 443, 2067, 2078, 2124
TspGWI	ACGGA	3 cut(s)	256, 2069, 2120
TspRI	CASTG	6 cut(s)	19, 139, 927, 1713, 1858, 1969
Van91I	CCANNNNNTGG	1 cut(s)	1334
Vha464I	CTTAAG	1 cut(s)	335
VpaK11BI	GGWCC	4 cut(s)	619, 1547, 1711, 2038
XapI	RAATTY	6 cut(s)	634, 1021, 1588, 1785, 1884, 1997
XcmI	CCANNNNNNNNNTGG	1 cut(s)	686
XmiI	GTMKAC	1 cut(s)	1217
XmnI	GAANNNNTTC	1 cut(s)	306
XspI	CTAG	5 cut(s)	188, 993, 1350, 1560, 2073
ZrmI	AGTACT	1 cut(s)	402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.