Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0014296

Physical Location & Seq

Genomic Coordinates Reverse (-)

6579495 .. 6583248

Gene Structure 3754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g11160.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGCTACTTGGTTAGCTAATTTGTTGCAGGGTTGTATAGACAGGAAGGCCCAATTGGCCGGGAGAGTTATTCATGGGGTTATATTACGTCATAAAGACTTGTTCTTTGATACGTTTTTGTCAAATAGGCTGATTGAGTTGTACTCAAAGTGCGGTAATTTGGGTTATGCTCACAATGTGTTTGATAAAATGCCTAAGCCGGATGTGTACTCATGGAATGCGGTGTTGGGTTGTTGTTGTAAGGCTGAGAGGTTGGGGGAAGCTGAGGAGTTGTTTCTGAGAATGCCTGAGAGGAATGTTGTGTCGTGGAACACGCTCATTGGTGCATTGGTTCGAGATGGTCAGGAGGAGAAGGGGTTGGGTGTTTATGAGGCGATGGTCTCGGAGGGGTTGGTGCCGACGCATTTTACTCTGGCGAGTGTGTTCAGTGCGTGTGGGGGGTTGTTGGATGTGGAGAAGGGGAGGAAGTGTCACGGCCTTGTGGTGAAGATTGGCCTTGAGGAGAATGTGTATGTTGGGAATGCTTTACTGTGTATGTATGCTAAGTGTGGAGTTATGAGGGATGCAATGCAGGTTTTCGGTGACATGGCTGAGCCGAATGAGGTTACTTTTACTGCTATGATGGGGGGGTTGAAGCAGACGGATAGAGTTGTGGAGGCTTTGGAGATGTTTAGGCTGATGTGTAGGAAAGGGGTGCGTGTTGATTCTGTTTCGTTGTCGAGTATGCTGGGTGTTTGTGCTAAAGGGTGTGGTGAGTCTGGTGGTTGTGATCATAGTGATGAGATTCCGAGTAACGTGAATGGGCAACAAATACATGGCCTTACAGTTAAACTTGGATTTGAGGGAGATCTTCACTTGAACAATTCATTGCTTGATATGTATGCAAAGAGTGCGGACATGAAGAGTGCTGAGAAGGTTTTCTCTAGTATACCTGGAGTTGGTGTTGTTTCTTGGAATGTCATGATAACTGGATACGGCCTGATATTTCAGAGTCAGAAAGCTATAGAATATCTACGAAGAATGCAGTCTTGTGGCTTTGAGCCTGATGAGGTCACATATATCAATTTGCTTGCAGCATGTGTCAAGTCTGGTGATATAAAAAGTGGTCGTCAAATGTTTGATAACATTTCACGCCCAAATGTAATGTCATGGAATGCCATACTCTCTGGCTATTTCCAGATGGAAGACCACTTTGAGGTAATCAAGCTTTTCAGGGAGATGCAGTTTCAGGGTGTGCAACCTGATCGATCTACTTTGGCAATTGCCCTCAGCTCTAGTGCAGCAATGGGGATTCTGGAGGCTGGGAAAGAGATTCATGCTGCCTCACACAAGGCTGTCTCTGATACAGATATATATGTTGCAAGCGCACTTATTGGCATGTATTCAAAGTGTGGTAAGACAGAAATGGCGAAGCATATATTTCATGATATGCAAGAATTAGATGTTGTTTGTTGGAACTCTATGATAGCAGGCCTTTCACTCGATTCTCAAGATAAGGAAGCTTTCAATTACTTTAAGCAGATGAGGCAACATGAGATGCTTCCGACCCAATTCTCTTATGCCACTATACTGAGTTGCTGTGCCAAGCTAGCTTCTTCATTTCAAGGGAAACAGGTCCATGCTCAGATAACAAAAGATGGATATGTGAGCGATGTCTTTGTTGGGAGTGCTCTCATCGGTATGTATTGCAAATGTGGTGATGTAGATGGTGCCCGTAATTTTTTCGATATGATGCCAAGCAAAAGTACAGTTACTTGGAATGAAATGATACATGGCTATGCACAGAATGGACGTGGGGATGAGGCTGTCCTTCTTTACTGGGACATGATTGCCTCAGCTGAGAGACCTGACGCCATTACTTTTATTTCCATTTTGACTGCTTGCAGCCATTCTGGATTGGTCGATGCAGGCATTGATATATTCAATTCAATGGAGCACAAACATGGAGTGGAGCCAGTTCTGGATCATTACACTTGCATTATTGATGCCCTTGGCCGTGCTGGTCGTTTCCAAGAAGCAGAAGTCTTACTAGATGAAATGCCGTATAAAGATGATCCAGTTATATGGGAGGTTTTGCTTAGTTCTTGCAGGGTTCATGCTAATGTGAGCTTAGCAAAAAGAGCAGCTGAAGAACTGATCCGCTTGGACCCTCATAATTCAGCTCCATATGTGCTTTTGGCCAATATTTATTCTTCTTTAGGAAGATGGGACGAGGCAAGAGCTGTGAGAGATCTAATGATTGACAAACAAGTCATCAAGGATCCTGGTTATAGCTGGATTGAGTATGAGAAAATGGTGGGATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

769

Amino Acids

85.04

Weight (kDa)

5.5

Isoelectric Point (pI)

38.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	70 - 100	1.8e-06	PPR repeat
PPR_2	PF13041	98 - 145	2.2e-08	PPR repeat family
PPR_2	PF13041	199 - 248	1.1e-08	PPR repeat family
PPR_2	PF13041	314 - 362	3.4e-08	PPR repeat family
PPR_2	PF13041	379 - 423	1e-08	PPR repeat family
PPR_2	PF13041	481 - 529	4.5e-08	PPR repeat family
PPR_2	PF13041	582 - 629	1.3e-09	PPR repeat family
PPR	PF01535	584 - 610	8.1e-06	PPR repeat
PPR_1	PF12854	649 - 680	2.8e-06	PPR repeat
E_motif	PF20431	699 - 761	4.2e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20770
fragaria_vesca	FvH4_3g11160
malus_domestica	MD10G1243200.v1.1
prunus_persica	Prupe.4G100900_v2.0.a1 Prupe.4G100900_v2.0.a1
pyrus_communis	pycom10g20340
rosa_chinensis	RchiOBHm_Chr5g0018061
rosa_laevigata	RLG00000032337
rosa_multiflora	Rmu_co8213086.1_g000001 Rmu_sc0010280.1_g000017 Rmu_sc0026609.1_g000001
rosa_roxburghii	Rroxscaffold_1G00059550
rosa_rugosa	Rorug05G0040100
rosa_samantha	Rh5BG131500 Rh5CG143500 Rh5DG133200
rosa_wichuraiana	Rw5G011580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2249
Acc36I	ACCTGC	1 cut(s)	562
AccB1I	GGYRCC	2 cut(s)	394, 1709
AccI	GTMKAC	1 cut(s)	928
AciI	CCGC	4 cut(s)	153, 221, 893, 2140
AclWI	GGATC	5 cut(s)	1971, 2048, 2131, 2255, 2268
AcoI	YGGCCR	3 cut(s)	57, 1993, 2178
AcuI	CTGAAG	1 cut(s)	2148
AcyI	GRCGYC	1 cut(s)	1851
AdeI	CACNNNGTG	1 cut(s)	178
AfaI	GTAC	3 cut(s)	143, 209, 1747
AfiI	CCNNNNNNNGG	2 cut(s)	938, 1195
AgsI	TTSAA	7 cut(s)	634, 859, 1386, 1507, 1604, 1924, 1929
AjiI	CACGTC	1 cut(s)	1793
AjnI	CCWGG	2 cut(s)	931, 2263
AjuI	GAANNNNNNNTTGG	4 cut(s)	38, 70, 209, 241
Alw21I	GWGCWC	2 cut(s)	1672, 1938
Alw26I	GTCTC	3 cut(s)	385, 1342, 1837
AlwI	GGATC	5 cut(s)	1971, 2048, 2131, 2255, 2268
AoxI	GGCC	9 cut(s)	48, 57, 475, 493, 817, 976, 1471, 1993, 2178
ApeKI	GCWGC	5 cut(s)	1073, 1280, 1319, 1884, 2123
ArsI	GACNNNNNNTTYG	4 cut(s)	89, 121, 1130, 1162
Asp700I	GAANNNNTTC	1 cut(s)	917
AspLEI	GCGC	1 cut(s)	1367
AspS9I	GGNCC	3 cut(s)	49, 1615, 2146
AsuC2I	CCSGG	1 cut(s)	61
AsuHPI	GGTGA	5 cut(s)	496, 593, 764, 1103, 1709
AsuNHI	GCTAGC	1 cut(s)	1588
AvaII	GGWCC	2 cut(s)	1615, 2146
BaeGI	GKGCMC	1 cut(s)	1714
BalI	TGGCCA	1 cut(s)	2180
BamHI	GGATCC	1 cut(s)	2260
BanI	GGYRCC	2 cut(s)	394, 1709
BbsI	GAAGAC	1 cut(s)	1191
Bbv12I	GWGCWC	2 cut(s)	1672, 1938
BbvCI	CCTCAGC	3 cut(s)	264, 1268, 1834
BbvI	GCAGC	5 cut(s)	1085, 1292, 1306, 1896, 2135
BccI	CCATC	7 cut(s)	332, 370, 616, 1174, 1631, 1700, 2199
BceAI	ACGGC	4 cut(s)	490, 991, 1980, 2026
BcgI	CGANNNNNNTGC	2 cut(s)	1226, 1260
BciT130I	CCWGG	2 cut(s)	933, 2265
BciVI	GTATCC	1 cut(s)	965
BclI	TGATCA	1 cut(s)	769
BcnI	CCSGG	1 cut(s)	61
BcoDI	GTCTC	3 cut(s)	385, 1342, 1837
BfaI	CTAG	4 cut(s)	924, 1275, 1589, 2030
BfmI	CTRYAG	1 cut(s)	1002
BfuAI	ACCTGC	1 cut(s)	562
BfuI	GTATCC	1 cut(s)	965
BglI	GCCNNNNNGGC	1 cut(s)	56
BglII	AGATCT	2 cut(s)	847, 2230
BisI	GCNGC	5 cut(s)	1074, 1281, 1320, 1885, 2124
BlpI	GCTNAGC	2 cut(s)	591, 2110
BlsI	GCNGC	5 cut(s)	1075, 1282, 1321, 1886, 2125
Bme1390I	CCNGG	3 cut(s)	61, 933, 2265
Bme18I	GGWCC	2 cut(s)	1615, 2146
BmgBI	CACGTC	1 cut(s)	1793
BmgT120I	GGNCC	3 cut(s)	49, 1615, 2146
BmiI	GGNNCC	5 cut(s)	396, 1711, 1953, 2148, 2262
BmrFI	CCNGG	3 cut(s)	61, 933, 2265
BmrI	ACTGGG	1 cut(s)	1828
BmsI	GCATC	6 cut(s)	553, 1209, 1527, 1722, 1894, 1975
BmtI	GCTAGC	1 cut(s)	1592
BmuI	ACTGGG	1 cut(s)	1828
BpiI	GAAGAC	1 cut(s)	1191
BplI	GAGNNNNNCTC	2 cut(s)	128, 160
BpmI	CTGGAG	2 cut(s)	954, 1316
Bpu10I	CCTNAGC	4 cut(s)	195, 264, 1268, 1834
Bpu1102I	GCTNAGC	2 cut(s)	591, 2110
BpuEI	CTTGAG	2 cut(s)	518, 1473
BpuMI	CCSGG	1 cut(s)	61
Bsa29I	ATCGAT	1 cut(s)	1246
BsaHI	GRCGYC	1 cut(s)	1851
BsaI	GGTCTC	2 cut(s)	385, 1837
BsaJI	CCNNGG	1 cut(s)	1990
Bsc4I	CCNNNNNNNGG	2 cut(s)	938, 1195
Bse1I	ACTGG	4 cut(s)	973, 1823, 1955, 2057
Bse3DI	GCAATG	3 cut(s)	573, 866, 1290
BseBI	CCWGG	2 cut(s)	933, 2265
BseCI	ATCGAT	1 cut(s)	1246
BseDI	CCNNGG	1 cut(s)	1990
BseGI	GGATG	4 cut(s)	208, 454, 568, 1804
BseLI	CCNNNNNNNGG	2 cut(s)	938, 1195
BseMI	GCAATG	3 cut(s)	573, 866, 1290
BseNI	ACTGG	4 cut(s)	973, 1823, 1955, 2057
BseRI	GAGGAG	3 cut(s)	281, 362, 515
BseSI	GKGCMC	1 cut(s)	1714
BseXI	GCAGC	5 cut(s)	1085, 1292, 1306, 1896, 2135
BseYI	CCCAGC	2 cut(s)	727, 1301
BsgI	GTGCAG	1 cut(s)	1299
BshFI	GGCC	9 cut(s)	50, 59, 477, 495, 819, 978, 1473, 1995, 2180
BshNI	GGYRCC	2 cut(s)	394, 1709
BshVI	ATCGAT	1 cut(s)	1246
BsiHKAI	GWGCWC	2 cut(s)	1672, 1938
BsiSI	CCGG	2 cut(s)	60, 200
BslFI	GGGAC	2 cut(s)	1835, 2222
BslI	CCNNNNNNNGG	2 cut(s)	938, 1195
BsmAI	GTCTC	3 cut(s)	385, 1342, 1837
BsmFI	GGGAC	2 cut(s)	1835, 2222
BsmI	GAATGC	5 cut(s)	223, 288, 526, 1026, 1159
BsnI	GGCC	9 cut(s)	50, 59, 477, 495, 819, 978, 1473, 1995, 2180
Bso31I	GGTCTC	2 cut(s)	385, 1837
Bsp1286I	GDGCHC	3 cut(s)	1672, 1714, 1938
Bsp1720I	GCTNAGC	2 cut(s)	591, 2110
BspACI	CCGC	4 cut(s)	153, 221, 893, 2140
BspANI	GGCC	9 cut(s)	50, 59, 477, 495, 819, 978, 1473, 1995, 2180
BspDI	ATCGAT	1 cut(s)	1246
BspHI	TCATGA	2 cut(s)	960, 1423
BspLI	GGNNCC	5 cut(s)	396, 1711, 1953, 2148, 2262
BspMI	ACCTGC	1 cut(s)	562
BspOI	GCTAGC	1 cut(s)	1592
BspPI	GGATC	5 cut(s)	1971, 2048, 2131, 2255, 2268
BspT107I	GGYRCC	2 cut(s)	394, 1709
BspTNI	GGTCTC	2 cut(s)	385, 1837
BsrDI	GCAATG	3 cut(s)	573, 866, 1290
BsrI	ACTGG	4 cut(s)	973, 1823, 1955, 2057
BssECI	CCNNGG	1 cut(s)	1990
BssNAI	GTATAC	1 cut(s)	929
BssNI	GRCGYC	1 cut(s)	1851
BssT1I	CCWWGG	1 cut(s)	1990
Bst1107I	GTATAC	1 cut(s)	929
Bst2UI	CCWGG	2 cut(s)	933, 2265
Bst4CI	ACNGT	3 cut(s)	531, 826, 1750
Bst6I	CTCTTC	1 cut(s)	896
BstACI	GRCGYC	1 cut(s)	1851
BstAPI	GCANNNNNTGC	1 cut(s)	890
BstC8I	GCNNGC	6 cut(s)	1071, 1363, 1471, 1590, 1882, 1909
BstF5I	GGATG	4 cut(s)	208, 454, 568, 1804
BstHHI	GCGC	1 cut(s)	1367
BstMAI	GTCTC	3 cut(s)	385, 1342, 1837
BstMWI	GCNNNNNNNGC	5 cut(s)	56, 890, 1525, 1589, 2120
BstNI	CCWGG	2 cut(s)	933, 2265
BstNSI	RCATGY	2 cut(s)	1080, 1381
BstSCI	CCNGG	3 cut(s)	59, 931, 2263
BstSFI	CTRYAG	1 cut(s)	1002
BstSLI	GKGCMC	1 cut(s)	1714
BstV1I	GCAGC	5 cut(s)	1085, 1292, 1306, 1896, 2135
BstV2I	GAAGAC	1 cut(s)	1191
BstX2I	RGATCY	3 cut(s)	847, 2230, 2260
BstXI	CCANNNNNNTGG	1 cut(s)	2064
BstYI	RGATCY	3 cut(s)	847, 2230, 2260
BstZ17I	GTATAC	1 cut(s)	929
Bsu15I	ATCGAT	1 cut(s)	1246
BsuI	GTATCC	1 cut(s)	965
BsuRI	GGCC	9 cut(s)	50, 59, 477, 495, 819, 978, 1473, 1995, 2180
BsuTUI	ATCGAT	1 cut(s)	1246
BtgZI	GCGATG	2 cut(s)	389, 1665
BtrI	CACGTC	1 cut(s)	1793
BtsCI	GGATG	4 cut(s)	208, 454, 568, 1804
BtsIMutI	CAGTG	1 cut(s)	433
BveI	ACCTGC	1 cut(s)	562
Cac8I	GCNNGC	6 cut(s)	1071, 1363, 1471, 1590, 1882, 1909
CciI	TCATGA	2 cut(s)	960, 1423
CfoI	GCGC	1 cut(s)	1367
Cfr13I	GGNCC	3 cut(s)	49, 1615, 2146
ClaI	ATCGAT	1 cut(s)	1246
CseI	GACGC	2 cut(s)	409, 1859
Csp6I	GTAC	3 cut(s)	142, 208, 1746
CviQI	GTAC	3 cut(s)	142, 208, 1746
DraIII	CACNNNGTG	1 cut(s)	178
DrdI	GACNNNNNNGTC	1 cut(s)	2249
DseDI	GACNNNNNNGTC	1 cut(s)	2249
EaeI	YGGCCR	3 cut(s)	57, 1993, 2178
Eam1104I	CTCTTC	1 cut(s)	896
EarI	CTCTTC	1 cut(s)	896
Eco130I	CCWWGG	1 cut(s)	1990
Eco147I	AGGCCT	1 cut(s)	1473
Eco31I	GGTCTC	2 cut(s)	385, 1837
Eco47I	GGWCC	2 cut(s)	1615, 2146
Eco57I	CTGAAG	1 cut(s)	2148
EcoRII	CCWGG	2 cut(s)	931, 2263
EcoT14I	CCWWGG	1 cut(s)	1990
ErhI	CCWWGG	1 cut(s)	1990
FaqI	GGGAC	2 cut(s)	1835, 2222
FauNDI	CATATG	1 cut(s)	2167
FbaI	TGATCA	1 cut(s)	769
FblI	GTMKAC	1 cut(s)	928
Fnu4HI	GCNGC	5 cut(s)	1074, 1281, 1320, 1885, 2124
FokI	GGATG	4 cut(s)	215, 461, 575, 1811
Fsp4HI	GCNGC	5 cut(s)	1074, 1281, 1320, 1885, 2124
FspBI	CTAG	4 cut(s)	924, 1275, 1589, 2030
GlaI	GCGC	1 cut(s)	1366
GluI	GCNGC	5 cut(s)	1074, 1281, 1320, 1885, 2124
GsaI	CCCAGC	2 cut(s)	731, 1305
GsuI	CTGGAG	2 cut(s)	954, 1316
HaeIII	GGCC	9 cut(s)	50, 59, 477, 495, 819, 978, 1473, 1995, 2180
HapII	CCGG	2 cut(s)	60, 200
HgaI	GACGC	2 cut(s)	409, 1859
HhaI	GCGC	1 cut(s)	1367
Hin1I	GRCGYC	1 cut(s)	1851
Hin6I	GCGC	1 cut(s)	1365
HinP1I	GCGC	1 cut(s)	1365
HindIII	AAGCTT	2 cut(s)	1205, 1500
HinfI	GANTC	7 cut(s)	704, 755, 784, 991, 1291, 1312, 1484
HpaII	CCGG	2 cut(s)	60, 200
HphI	GGTGA	5 cut(s)	496, 593, 764, 1103, 1709
Hpy166II	GTNNAC	2 cut(s)	208, 929
Hpy188I	TCNGA	8 cut(s)	279, 385, 789, 990, 996, 1342, 1545, 1626
Hpy188III	TCNNGA	9 cut(s)	335, 344, 961, 1177, 1295, 1424, 1490, 1893, 1961
Hpy8I	GTNNAC	2 cut(s)	208, 929
Hpy99I	CGWCG	1 cut(s)	403
HpyAV	CCTTC	5 cut(s)	40, 346, 451, 907, 1820
HpyCH4III	ACNGT	3 cut(s)	531, 826, 1750
HpyCH4IV	ACGT	4 cut(s)	88, 113, 795, 1792
HpyF10VI	GCNNNNNNNGC	5 cut(s)	56, 890, 1525, 1589, 2120
HpySE526I	ACGT	4 cut(s)	88, 113, 795, 1792
Hsp92I	GRCGYC	1 cut(s)	1851
HspAI	GCGC	1 cut(s)	1365
Ksp22I	TGATCA	1 cut(s)	769
LmnI	GCTCC	3 cut(s)	1933, 1951, 2167
Lsp1109I	GCAGC	5 cut(s)	1085, 1292, 1306, 1896, 2135
LweI	GCATC	6 cut(s)	553, 1209, 1527, 1722, 1894, 1975
MaeI	CTAG	4 cut(s)	924, 1275, 1589, 2030
MaeII	ACGT	4 cut(s)	88, 113, 795, 1792
MaeIII	GTNAC	6 cut(s)	470, 581, 604, 791, 1051, 1750
MboII	GAAGA	9 cut(s)	499, 842, 913, 1029, 1196, 1587, 2141, 2184, 2214
MfeI	CAATTG	2 cut(s)	53, 1260
MflI	RGATCY	3 cut(s)	847, 2230, 2260
MhlI	GDGCHC	3 cut(s)	1672, 1714, 1938
MlsI	TGGCCA	1 cut(s)	2180
MluNI	TGGCCA	1 cut(s)	2180
MlyI	GAGTC	2 cut(s)	764, 1000
MmeI	TCCRAC	3 cut(s)	426, 1433, 1568
Mox20I	TGGCCA	1 cut(s)	2180
MroXI	GAANNNNTTC	1 cut(s)	917
MscI	TGGCCA	1 cut(s)	2180
MseI	TTAA	2 cut(s)	828, 1515
MslI	CAYNNNNRTG	5 cut(s)	777, 1679, 1776, 1941, 2100
Msp20I	TGGCCA	1 cut(s)	2180
MspA1I	CMGCKG	2 cut(s)	1838, 2126
MspI	CCGG	2 cut(s)	60, 200
MspR9I	CCNGG	3 cut(s)	61, 933, 2265
MunI	CAATTG	2 cut(s)	53, 1260
Mva1269I	GAATGC	5 cut(s)	223, 288, 526, 1026, 1159
MvaI	CCWGG	2 cut(s)	933, 2265
MwoI	GCNNNNNNNGC	5 cut(s)	56, 890, 1525, 1589, 2120
NciI	CCSGG	1 cut(s)	61
NdeI	CATATG	1 cut(s)	2167
NheI	GCTAGC	1 cut(s)	1588
NlaIV	GGNNCC	5 cut(s)	396, 1711, 1953, 2148, 2262
NmuCI	GTSAC	3 cut(s)	470, 581, 1051
NspI	RCATGY	2 cut(s)	1080, 1381
PagI	TCATGA	2 cut(s)	960, 1423
PceI	AGGCCT	1 cut(s)	1473
PctI	GAATGC	5 cut(s)	223, 288, 526, 1026, 1159
PdmI	GAANNNNTTC	1 cut(s)	917
PfeI	GAWTC	5 cut(s)	704, 784, 1291, 1312, 1484
PkrI	GCNGC	5 cut(s)	1075, 1282, 1321, 1886, 2125
PleI	GAGTC	2 cut(s)	763, 999
PpsI	GAGTC	2 cut(s)	763, 999
Psp6I	CCWGG	2 cut(s)	931, 2263
PspFI	CCCAGC	2 cut(s)	727, 1301
PspGI	CCWGG	2 cut(s)	931, 2263
PspN4I	GGNNCC	5 cut(s)	396, 1711, 1953, 2148, 2262
PspPI	GGNCC	3 cut(s)	49, 1615, 2146
PsuI	RGATCY	3 cut(s)	847, 2230, 2260
PvuII	CAGCTG	2 cut(s)	1838, 2126
RsaI	GTAC	3 cut(s)	143, 209, 1747
RsaNI	GTAC	3 cut(s)	142, 208, 1746
RseI	CAYNNNNRTG	5 cut(s)	777, 1679, 1776, 1941, 2100
SaqAI	TTAA	2 cut(s)	828, 1515
SatI	GCNGC	5 cut(s)	1074, 1281, 1320, 1885, 2124
Sau96I	GGNCC	3 cut(s)	49, 1615, 2146
SchI	GAGTC	2 cut(s)	764, 1000
ScrFI	CCNGG	3 cut(s)	61, 933, 2265
SduI	GDGCHC	3 cut(s)	1672, 1714, 1938
SfaNI	GCATC	6 cut(s)	553, 1209, 1527, 1722, 1894, 1975
SfcI	CTRYAG	1 cut(s)	1002
SfiI	GGCCNNNNNGGCC	1 cut(s)	56
SinI	GGWCC	2 cut(s)	1615, 2146
SmiMI	CAYNNNNRTG	5 cut(s)	777, 1679, 1776, 1941, 2100
SmlI	CTYRAG	2 cut(s)	497, 1488
SmoI	CTYRAG	2 cut(s)	497, 1488
SseBI	AGGCCT	1 cut(s)	1473
SsiI	CCGC	4 cut(s)	153, 221, 893, 2140
SspI	AATATT	1 cut(s)	2185
SspMI	CTAG	4 cut(s)	924, 1275, 1589, 2030
StuI	AGGCCT	1 cut(s)	1473
StyD4I	CCNGG	3 cut(s)	59, 931, 2263
StyI	CCWWGG	1 cut(s)	1990
TaaI	ACNGT	3 cut(s)	531, 826, 1750
TaiI	ACGT	4 cut(s)	91, 116, 798, 1795
TaqI	TCGA	6 cut(s)	334, 719, 1246, 1482, 1725, 1902
TatI	WGTACW	3 cut(s)	141, 207, 1745
TfiI	GAWTC	5 cut(s)	704, 784, 1291, 1312, 1484
Tru1I	TTAA	2 cut(s)	828, 1515
Tru9I	TTAA	2 cut(s)	828, 1515
TscAI	CASTG	1 cut(s)	433
TseFI	GTSAC	3 cut(s)	470, 581, 1051
TseI	GCWGC	5 cut(s)	1073, 1280, 1319, 1884, 2123
Tsp45I	GTSAC	3 cut(s)	470, 581, 1051
TspDTI	ATGAA	9 cut(s)	62, 855, 914, 1304, 1412, 1587, 1776, 2049, 2084
TspGWI	ACGGA	1 cut(s)	656
TspRI	CASTG	1 cut(s)	433
VpaK11BI	GGWCC	2 cut(s)	1615, 2146
XceI	RCATGY	2 cut(s)	1080, 1381
XmiI	GTMKAC	1 cut(s)	928
XmnI	GAANNNNTTC	1 cut(s)	917
XspI	CTAG	4 cut(s)	924, 1275, 1589, 2030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.