Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0014296

Physical Location & Seq

Genomic Coordinates Reverse (-)

23262357 .. 23264687

Gene Structure 2331 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g20340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGAAGGCAGAGCAACCTGTTTATCAAATCTCCTGCAGAGTTGCATAGACAAGAAATCCCTTTTGTCTGGCAAGCTTATTCATGCTTTTCTAGTACGCAGCAACGGTCTCTTTTCGAATACTTTCCTCTCCAACCGCCTCGTCGAGTTGTACTCGAAATGCGGCAATATCGAGTATGCAGACAGAGTGTTTGATAAAATGCCGCACCCAGACGTGTACTCTTGGAATGCCATATTGGCTGGTTACTCTAAATTTGGGAGTTTAGGGGATGCTCAGGAGTTGTTTTTGAGAATGCCGGAGCGAAACACTGTTTCGTGGAATACTCTGATTAGTGCCTTGGTTCGACATGGGCAAGAAGAAACGGCATTGGGGGTTTACGATACAATGATTTTGGAGGGATTCATGCCTACCCGGTTCACGTTGGCGAGTGTGTTTAGTGCGTGCGGAGCGTTGTTGGATGTGGAGCATGGTAGGAGATCTCATGGTCTTGTTATCAAAATTGGTCTTGAGGAGAATATCTATGTTGCCAATGCTTTACTCTCCATGTATGCAAAATGTGGACTTATTAGGGATGCGGTTCAGGTTTTTGCTGACATGGATGAGCCTAATGAGGTTACTTTTACAGCTTTGATGGGAGGGTTAGCGCAGACGGACAGAGTCATGGAGGCTGTGGAAATGTTTAGAATGATGTGTAGGAAAGGGGTTCGTATTGATTCTATCTCATTGTCGAGCATCTTGGGTGTTTGTGCCAAAAGAGGAGGTGGCGAGTTTGGTGTTGGTGATCAGAATGATGGGATTCCATGTAATGTGAGCGGACAACAAATACATGGGCTTACAATTAAACTTGGATTTGACGGAGACCTTCATGTGAACAATTCATTGCTCGATCTGTACGCAAAGAATGCGGATATGAATAGTGCCGAGAAGGTTTTTGCTAGTTTACCTGAAGTTAGTAATGTTTCATGGAATGTCATGATAGCCGGGTATGGCCAGATACACCAGAGTCAGAAAGCTATAGAATATCTGCAAAGGATGCGATCTTGCTGTTTTGAACCAGATGAGGTTACTTACATACACTTGCTTGCAGCATGTGTCAAGTCTGGTGATATAAAAAGTGGACGCAAAATGTTTGATAACATTTCTTGTCCAAATGTGAGTTCATGGAATGCCATTCTCTCTGGATATTTCCAGACTGGTGATCACGAGGAGGCGATAAAGCTGTTTAGGGAAATGCAGTTCCAGAATGTACAACCTGATCGAACAACTTTTGCAATTGCCCTCAGCTCCTGTGCTGCAATGGGGCTTCTGGAGGCTGGAAAAGAGGTTCATGCTGCCTCCCAAAAGGCAGCCTTTCATACAGATATATATGTTGCAAGTGGACTTATTGGCATGTATTCAAAGTGTGCTAAGACAGAAATGGCAAAGCATATATTTCATAGTATGCTTGAATTAGATATTGTCTGTTGGAACTCTATGTTAGCAGGCCTTTCACTCAATTCTCAAGATAAGGAAGCTTTCACTTTCTTTAAGCATATGCGGGAAGATGAGATCCTTCCTACCCAATTCACTTATGCTACTGTACTGAGTTGTTGTGCAAAGCTATCTTCTTCGTTTCAAGGGAAACAGGTTCATGCTCAGATGACAAAAGATGGATATATGAATGAGGTCTTTGTAGGAAGTGCTCTCATTGATATGTATTGCAAATGTGGTGATGTGGATGAGGCCCGAAACTTTTTTGATATGATGCCTAGCAAAAATACTGTTACTTGGAATGAAATGATACATGGGTATGCACAAAATGGACGTGGAGATGAGGCCGTTCTGCTTTACAGGGACATGATTGAATTGGGTGAAAAACCTGACGGTATAACTTTTGTTGCTGTTTTGACTGCTTGTAGCCATGCCGGATTGGTCGATGAAGGCATTGACATATTCAATTCAATGGAAAAAGAACTCGGAGTGGTGCCTGATTTGGATCATTATACTTGCATTATTGATGCTTTAGGCCGTGCTGGTCGTTTCCACGAAGCAGAAGTCCTAATAGAGGAGATGCCATATAAAGATGATCCAGTTATATGGGAGGTTTTGCTTAGCTCTTGCAGGGTTTATGCTAATGTGCGCTTAGCTAAAAGGGCAGCAGATGAACTCTTCCGCTTGACCCCACATAATTCAGCCCCTTATGTGCTTCTCGGCAATATTTATTCTTCTTTAGGAAGATGGGACGAGGCAAGGGAAGTGAGAGATAAAATGAGTGATACACAGGTTGCTAAGGACCCAGGTTATAGCTGGATTGAATACAACAAGGGAGACCGAACTGGCTATGGGGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

777

Amino Acids

86.17

Weight (kDa)

5.34

Isoelectric Point (pI)

39.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	101 - 148	1.7e-08	PPR repeat family
PPR	PF01535	104 - 134	6.8e-06	PPR repeat
PPR_2	PF13041	202 - 251	1.3e-08	PPR repeat family
PPR_2	PF13041	319 - 366	2.5e-07	PPR repeat family
PPR_1	PF12854	382 - 412	5.3e-06	PPR repeat
PPR_2	PF13041	383 - 431	8.7e-14	PPR repeat family
PPR	PF01535	387 - 412	2.3e-07	PPR repeat
PPR_2	PF13041	485 - 533	7.2e-09	PPR repeat family
PPR_1	PF12854	561 - 582	5.5e-06	PPR repeat
PPR_2	PF13041	585 - 633	1.3e-11	PPR repeat family
PPR	PF01535	588 - 617	1.1e-07	PPR repeat
PPR_1	PF12854	653 - 684	2.9e-07	PPR repeat
E_motif	PF20431	703 - 765	1.2e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20770
fragaria_vesca	FvH4_3g11160
malus_domestica	MD10G1243200.v1.1
prunus_persica	Prupe.4G100900_v2.0.a1 Prupe.4G100900_v2.0.a1
pyrus_communis	pycom10g20340
rosa_chinensis	RchiOBHm_Chr5g0018061
rosa_laevigata	RLG00000032337
rosa_multiflora	Rmu_co8213086.1_g000001 Rmu_sc0010280.1_g000017 Rmu_sc0026609.1_g000001
rosa_roxburghii	Rroxscaffold_1G00059550
rosa_rugosa	Rorug05G0040100
rosa_samantha	Rh5BG131500 Rh5CG143500 Rh5DG133200
rosa_wichuraiana	Rw5G011580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1963
AccBSI	CCGCTC	1 cut(s)	813
AciI	CCGC	9 cut(s)	136, 162, 203, 444, 575, 813, 905, 1537, 2152
AclWI	GGATC	3 cut(s)	1543, 1983, 2060
AcoI	YGGCCR	1 cut(s)	988
AcsI	RAATTY	1 cut(s)	251
AcuI	CTGAAG	1 cut(s)	966
AfaI	GTAC	6 cut(s)	96, 152, 218, 893, 1248, 1581
AfiI	CCNNNNNNNGG	1 cut(s)	2044
AflIII	ACRYGT	1 cut(s)	213
AgsI	TTSAA	8 cut(s)	1052, 1398, 1448, 1616, 1844, 1936, 1941, 2294
AjiI	CACGTC	2 cut(s)	214, 1805
AjnI	CCWGG	1 cut(s)	2275
AjuI	GAANNNNNNNTTGG	4 cut(s)	218, 250, 1141, 1173
AloI	GAACNNNNNNTCC	4 cut(s)	1220, 1252, 1308, 1340
Alw21I	GWGCWC	1 cut(s)	1684
Alw26I	GTCTC	3 cut(s)	113, 852, 2301
AlwI	GGATC	3 cut(s)	1543, 1983, 2060
AlwNI	CAGNNNCTG	1 cut(s)	1287
AoxI	GGCC	5 cut(s)	988, 1483, 1722, 1815, 2005
ApeKI	GCWGC	6 cut(s)	99, 1085, 1292, 1331, 1346, 2135
ApoI	RAATTY	1 cut(s)	251
ArsI	GACNNNNNNTTYG	4 cut(s)	173, 205, 2019, 2051
Asp700I	GAANNNNTTC	1 cut(s)	122
AspLEI	GCGC	2 cut(s)	646, 2121
AspS9I	GGNCC	2 cut(s)	1723, 2272
AsuC2I	CCSGG	2 cut(s)	412, 982
AsuHPI	GGTGA	5 cut(s)	791, 1115, 1208, 1721, 1862
AsuII	TTCGAA	1 cut(s)	116
AvaII	GGWCC	1 cut(s)	2272
BaeI	ACNNNNGTAYC	4 cut(s)	1772, 1805, 2247, 2280
BalI	TGGCCA	1 cut(s)	990
BanI	GGYRCC	1 cut(s)	1963
BauI	CACGAG	1 cut(s)	1202
Bbv12I	GWGCWC	1 cut(s)	1684
BbvCI	CCTCAGC	1 cut(s)	1280
BbvI	GCAGC	6 cut(s)	111, 1097, 1279, 1318, 1358, 2147
BccI	CCATC	4 cut(s)	625, 785, 1643, 2211
BceAI	ACGGC	3 cut(s)	378, 1802, 1992
BciT130I	CCWGG	1 cut(s)	2277
BclI	TGATCA	2 cut(s)	781, 1198
BcnI	CCSGG	2 cut(s)	412, 982
BcoDI	GTCTC	3 cut(s)	113, 852, 2301
BfaI	CTAG	3 cut(s)	92, 936, 1749
BfmI	CTRYAG	2 cut(s)	35, 1014
BglI	GCCNNNNNGGC	1 cut(s)	236
BglII	AGATCT	1 cut(s)	476
BisI	GCNGC	8 cut(s)	100, 163, 203, 1086, 1293, 1332, 1347, 2136
BlpI	GCTNAGC	2 cut(s)	2090, 2122
BlsI	GCNGC	8 cut(s)	101, 164, 204, 1087, 1294, 1333, 1348, 2137
Bme1390I	CCNGG	3 cut(s)	412, 982, 2277
Bme18I	GGWCC	1 cut(s)	2272
BmgBI	CACGTC	2 cut(s)	214, 1805
BmgT120I	GGNCC	2 cut(s)	1723, 2272
BmiI	GGNNCC	2 cut(s)	1965, 2274
BmrFI	CCNGG	3 cut(s)	412, 982, 2277
BmsI	GCATC	7 cut(s)	259, 562, 741, 1023, 1734, 1987, 2040
BplI	GAGNNNNNCTC	2 cut(s)	137, 169
BpmI	CTGGAG	1 cut(s)	1328
Bpu10I	CCTNAGC	3 cut(s)	273, 1280, 2268
Bpu1102I	GCTNAGC	2 cut(s)	2090, 2122
Bpu14I	TTCGAA	1 cut(s)	116
BpuEI	CTTGAG	2 cut(s)	527, 1485
BpuMI	CCSGG	2 cut(s)	412, 982
BsaBI	GATNNNNATC	1 cut(s)	1974
BsaI	GGTCTC	3 cut(s)	113, 852, 2301
BsaJI	CCNNGG	2 cut(s)	336, 2275
Bsc4I	CCNNNNNNNGG	1 cut(s)	2044
Bse1I	ACTGG	3 cut(s)	1198, 2069, 2320
Bse3DI	GCAATG	2 cut(s)	878, 1302
Bse8I	GATNNNNATC	1 cut(s)	1974
BseBI	CCWGG	1 cut(s)	2277
BseDI	CCNNGG	2 cut(s)	336, 2275
BseGI	GGATG	6 cut(s)	274, 463, 577, 604, 1038, 1723
BseJI	GATNNNNATC	1 cut(s)	1974
BseLI	CCNNNNNNNGG	1 cut(s)	2044
BseMI	GCAATG	2 cut(s)	878, 1302
BseMII	CTCAG	4 cut(s)	287, 1294, 1574, 1649
BseNI	ACTGG	3 cut(s)	1198, 2069, 2320
BseRI	GAGGAG	4 cut(s)	524, 771, 1220, 2060
BseXI	GCAGC	6 cut(s)	111, 1097, 1279, 1318, 1358, 2147
BshFI	GGCC	5 cut(s)	990, 1485, 1724, 1817, 2007
BshNI	GGYRCC	1 cut(s)	1963
BsiHKAI	GWGCWC	1 cut(s)	1684
BsiSI	CCGG	4 cut(s)	296, 412, 981, 1905
BslFI	GGGAC	2 cut(s)	1847, 2234
BslI	CCNNNNNNNGG	1 cut(s)	2044
BsmAI	GTCTC	3 cut(s)	113, 852, 2301
BsmFI	GGGAC	2 cut(s)	1847, 2234
BsmI	GAATGC	4 cut(s)	232, 297, 907, 1171
BsnI	GGCC	5 cut(s)	990, 1485, 1724, 1817, 2007
Bso31I	GGTCTC	3 cut(s)	113, 852, 2301
Bsp119I	TTCGAA	1 cut(s)	116
Bsp1286I	GDGCHC	1 cut(s)	1684
Bsp1407I	TGTACA	1 cut(s)	1246
Bsp143I	GATC	9 cut(s)	476, 781, 886, 1037, 1198, 1255, 1548, 1975, 2065
Bsp1720I	GCTNAGC	2 cut(s)	2090, 2122
BspACI	CCGC	9 cut(s)	136, 162, 203, 444, 575, 813, 905, 1537, 2152
BspANI	GGCC	5 cut(s)	990, 1485, 1724, 1817, 2007
BspCNI	CTCAG	4 cut(s)	286, 1293, 1575, 1648
BspHI	TCATGA	1 cut(s)	972
BspLI	GGNNCC	2 cut(s)	1965, 2274
BspMAI	CTGCAG	1 cut(s)	39
BspPI	GGATC	3 cut(s)	1543, 1983, 2060
BspT104I	TTCGAA	1 cut(s)	116
BspT107I	GGYRCC	1 cut(s)	1963
BspTNI	GGTCTC	3 cut(s)	113, 852, 2301
BsrBI	CCGCTC	1 cut(s)	813
BsrDI	GCAATG	2 cut(s)	878, 1302
BsrGI	TGTACA	1 cut(s)	1246
BsrI	ACTGG	3 cut(s)	1198, 2069, 2320
BssECI	CCNNGG	2 cut(s)	336, 2275
BssMI	GATC	9 cut(s)	476, 781, 886, 1037, 1198, 1255, 1548, 1975, 2065
BssSI	CACGAG	1 cut(s)	1202
BssT1I	CCWWGG	1 cut(s)	336
Bst2BI	CACGAG	1 cut(s)	1202
Bst2UI	CCWGG	1 cut(s)	2277
Bst4CI	ACNGT	5 cut(s)	107, 310, 1579, 1762, 1865
Bst6I	CTCTTC	1 cut(s)	2153
BstAPI	GCANNNNNTGC	2 cut(s)	902, 1033
BstAUI	TGTACA	1 cut(s)	1246
BstBI	TTCGAA	1 cut(s)	116
BstC8I	GCNNGC	4 cut(s)	74, 442, 1083, 1483
BstDEI	CTNAG	8 cut(s)	273, 1280, 1407, 1583, 1635, 2090, 2122, 2268
BstENI	CCTNNNNNAGG	1 cut(s)	2042
BstF5I	GGATG	6 cut(s)	274, 463, 577, 604, 1038, 1723
BstHHI	GCGC	2 cut(s)	646, 2121
BstKTI	GATC	9 cut(s)	479, 784, 889, 1040, 1201, 1258, 1551, 1978, 2068
BstMAI	GTCTC	3 cut(s)	113, 852, 2301
BstMBI	GATC	9 cut(s)	476, 781, 886, 1037, 1198, 1255, 1548, 1975, 2065
BstMWI	GCNNNNNNNGC	5 cut(s)	236, 446, 902, 1033, 2132
BstNI	CCWGG	1 cut(s)	2277
BstNSI	RCATGY	2 cut(s)	1092, 1393
BstSCI	CCNGG	3 cut(s)	410, 980, 2275
BstSFI	CTRYAG	2 cut(s)	35, 1014
BstV1I	GCAGC	6 cut(s)	111, 1097, 1279, 1318, 1358, 2147
BstX2I	RGATCY	2 cut(s)	476, 1548
BstXI	CCANNNNNNTGG	1 cut(s)	2076
BstYI	RGATCY	2 cut(s)	476, 1548
BsuRI	GGCC	5 cut(s)	990, 1485, 1724, 1817, 2007
BtrI	CACGTC	2 cut(s)	214, 1805
BtsCI	GGATG	6 cut(s)	274, 463, 577, 604, 1038, 1723
BtsIMutI	CAGTG	1 cut(s)	306
Cac8I	GCNNGC	4 cut(s)	74, 442, 1083, 1483
CaiI	CAGNNNCTG	1 cut(s)	1287
CciI	TCATGA	1 cut(s)	972
CfoI	GCGC	2 cut(s)	646, 2121
Cfr13I	GGNCC	2 cut(s)	1723, 2272
CseI	GACGC	1 cut(s)	1128
Csp6I	GTAC	6 cut(s)	95, 151, 217, 892, 1247, 1580
CviQI	GTAC	6 cut(s)	95, 151, 217, 892, 1247, 1580
DdeI	CTNAG	8 cut(s)	273, 1280, 1407, 1583, 1635, 2090, 2122, 2268
DpnI	GATC	9 cut(s)	478, 783, 888, 1039, 1200, 1257, 1550, 1977, 2067
DpnII	GATC	9 cut(s)	476, 781, 886, 1037, 1198, 1255, 1548, 1975, 2065
EaeI	YGGCCR	1 cut(s)	988
Eam1104I	CTCTTC	1 cut(s)	2153
EarI	CTCTTC	1 cut(s)	2153
Eco130I	CCWWGG	1 cut(s)	336
Eco147I	AGGCCT	1 cut(s)	1485
Eco31I	GGTCTC	3 cut(s)	113, 852, 2301
Eco47I	GGWCC	1 cut(s)	2272
Eco57I	CTGAAG	1 cut(s)	966
EcoNI	CCTNNNNNAGG	1 cut(s)	2042
EcoO109I	RGGNCCY	1 cut(s)	2272
EcoRII	CCWGG	1 cut(s)	2275
EcoT14I	CCWWGG	1 cut(s)	336
ErhI	CCWWGG	1 cut(s)	336
FalI	AAGNNNNNCTT	2 cut(s)	1334, 1366
FaqI	GGGAC	2 cut(s)	1847, 2234
FauI	CCCGC	1 cut(s)	1530
FauNDI	CATATG	1 cut(s)	1533
FbaI	TGATCA	2 cut(s)	781, 1198
Fnu4HI	GCNGC	8 cut(s)	100, 163, 203, 1086, 1293, 1332, 1347, 2136
FokI	GGATG	6 cut(s)	281, 470, 584, 611, 1045, 1730
Fsp4HI	GCNGC	8 cut(s)	100, 163, 203, 1086, 1293, 1332, 1347, 2136
FspBI	CTAG	3 cut(s)	92, 936, 1749
GlaI	GCGC	2 cut(s)	645, 2120
GluI	GCNGC	8 cut(s)	100, 163, 203, 1086, 1293, 1332, 1347, 2136
GsuI	CTGGAG	1 cut(s)	1328
HaeIII	GGCC	5 cut(s)	990, 1485, 1724, 1817, 2007
HapII	CCGG	4 cut(s)	296, 412, 981, 1905
HgaI	GACGC	1 cut(s)	1128
HhaI	GCGC	2 cut(s)	646, 2121
Hin6I	GCGC	2 cut(s)	644, 2119
HinP1I	GCGC	2 cut(s)	644, 2119
HindIII	AAGCTT	2 cut(s)	74, 1512
HinfI	GANTC	5 cut(s)	399, 657, 713, 796, 1003
HpaII	CCGG	4 cut(s)	296, 412, 981, 1905
HphI	GGTGA	5 cut(s)	791, 1115, 1208, 1721, 1862
Hpy166II	GTNNAC	8 cut(s)	217, 376, 417, 560, 871, 941, 1118, 1379
Hpy188I	TCNGA	5 cut(s)	327, 786, 1008, 1638, 1958
Hpy188III	TCNNGA	9 cut(s)	275, 506, 973, 1179, 1189, 1202, 1240, 1307, 1502
Hpy8I	GTNNAC	8 cut(s)	217, 376, 417, 560, 871, 941, 1118, 1379
Hpy99I	CGWCG	1 cut(s)	146
HpyAV	CCTTC	4 cut(s)	872, 919, 1562, 1913
HpyCH4III	ACNGT	5 cut(s)	107, 310, 1579, 1762, 1865
HpyCH4IV	ACGT	3 cut(s)	213, 419, 1804
HpyF10VI	GCNNNNNNNGC	5 cut(s)	236, 446, 902, 1033, 2132
HpyF3I	CTNAG	8 cut(s)	273, 1280, 1407, 1583, 1635, 2090, 2122, 2268
HpySE526I	ACGT	3 cut(s)	213, 419, 1804
HspAI	GCGC	2 cut(s)	644, 2119
Ksp22I	TGATCA	2 cut(s)	781, 1198
Kzo9I	GATC	9 cut(s)	476, 781, 886, 1037, 1198, 1255, 1548, 1975, 2065
LmnI	GCTCC	4 cut(s)	298, 446, 463, 1289
Lsp1109I	GCAGC	6 cut(s)	111, 1097, 1279, 1318, 1358, 2147
LweI	GCATC	7 cut(s)	259, 562, 741, 1023, 1734, 1987, 2040
MaeI	CTAG	3 cut(s)	92, 936, 1749
MaeII	ACGT	3 cut(s)	213, 419, 1804
MaeIII	GTNAC	4 cut(s)	242, 613, 1063, 1762
MalI	GATC	9 cut(s)	478, 783, 888, 1039, 1200, 1257, 1550, 1977, 2067
MbiI	CCGCTC	1 cut(s)	813
MboI	GATC	9 cut(s)	476, 781, 886, 1037, 1198, 1255, 1548, 1975, 2065
MboII	GAAGA	7 cut(s)	368, 1553, 1596, 1599, 2140, 2196, 2226
MfeI	CAATTG	1 cut(s)	1272
MflI	RGATCY	2 cut(s)	476, 1548
MhlI	GDGCHC	1 cut(s)	1684
MlsI	TGGCCA	1 cut(s)	990
MluNI	TGGCCA	1 cut(s)	990
MlyI	GAGTC	2 cut(s)	666, 1012
MmeI	TCCRAC	3 cut(s)	156, 435, 1445
Mox20I	TGGCCA	1 cut(s)	990
MroXI	GAANNNNTTC	1 cut(s)	122
MscI	TGGCCA	1 cut(s)	990
MseI	TTAA	2 cut(s)	840, 1527
MslI	CAYNNNNRTG	2 cut(s)	1691, 1788
Msp20I	TGGCCA	1 cut(s)	990
MspI	CCGG	4 cut(s)	296, 412, 981, 1905
MspR9I	CCNGG	3 cut(s)	412, 982, 2277
MunI	CAATTG	1 cut(s)	1272
Mva1269I	GAATGC	4 cut(s)	232, 297, 907, 1171
MvaI	CCWGG	1 cut(s)	2277
MwoI	GCNNNNNNNGC	5 cut(s)	236, 446, 902, 1033, 2132
NciI	CCSGG	2 cut(s)	412, 982
NdeI	CATATG	1 cut(s)	1533
NdeII	GATC	9 cut(s)	476, 781, 886, 1037, 1198, 1255, 1548, 1975, 2065
NlaIV	GGNNCC	2 cut(s)	1965, 2274
NmeAIII	GCCGAG	2 cut(s)	946, 2169
NspI	RCATGY	2 cut(s)	1092, 1393
NspV	TTCGAA	1 cut(s)	116
PagI	TCATGA	1 cut(s)	972
PceI	AGGCCT	1 cut(s)	1485
PctI	GAATGC	4 cut(s)	232, 297, 907, 1171
PdmI	GAANNNNTTC	1 cut(s)	122
PfeI	GAWTC	3 cut(s)	399, 713, 796
PflFI	GACNNNGTC	1 cut(s)	656
PkrI	GCNGC	8 cut(s)	101, 164, 204, 1087, 1294, 1333, 1348, 2137
PleI	GAGTC	2 cut(s)	665, 1011
PpsI	GAGTC	2 cut(s)	665, 1011
PpuMI	RGGWCCY	1 cut(s)	2272
Psp5II	RGGWCCY	1 cut(s)	2272
Psp6I	CCWGG	1 cut(s)	2275
PspGI	CCWGG	1 cut(s)	2275
PspN4I	GGNNCC	2 cut(s)	1965, 2274
PspPI	GGNCC	2 cut(s)	1723, 2272
PspPPI	RGGWCCY	1 cut(s)	2272
PstI	CTGCAG	1 cut(s)	39
PstNI	CAGNNNCTG	1 cut(s)	1287
PsuI	RGATCY	2 cut(s)	476, 1548
PsyI	GACNNNGTC	1 cut(s)	656
RsaI	GTAC	6 cut(s)	96, 152, 218, 893, 1248, 1581
RsaNI	GTAC	6 cut(s)	95, 151, 217, 892, 1247, 1580
RseI	CAYNNNNRTG	2 cut(s)	1691, 1788
SaqAI	TTAA	2 cut(s)	840, 1527
SatI	GCNGC	8 cut(s)	100, 163, 203, 1086, 1293, 1332, 1347, 2136
Sau3AI	GATC	9 cut(s)	476, 781, 886, 1037, 1198, 1255, 1548, 1975, 2065
Sau96I	GGNCC	2 cut(s)	1723, 2272
SchI	GAGTC	2 cut(s)	666, 1012
ScrFI	CCNGG	3 cut(s)	412, 982, 2277
SduI	GDGCHC	1 cut(s)	1684
SfaNI	GCATC	7 cut(s)	259, 562, 741, 1023, 1734, 1987, 2040
SfcI	CTRYAG	2 cut(s)	35, 1014
SfuI	TTCGAA	1 cut(s)	116
SinI	GGWCC	1 cut(s)	2272
SmiMI	CAYNNNNRTG	2 cut(s)	1691, 1788
SmlI	CTYRAG	2 cut(s)	506, 1500
SmoI	CTYRAG	2 cut(s)	506, 1500
SseBI	AGGCCT	1 cut(s)	1485
SsiI	CCGC	9 cut(s)	136, 162, 203, 444, 575, 813, 905, 1537, 2152
SspI	AATATT	1 cut(s)	2197
SspMI	CTAG	3 cut(s)	92, 936, 1749
StuI	AGGCCT	1 cut(s)	1485
StyD4I	CCNGG	3 cut(s)	410, 980, 2275
StyI	CCWWGG	1 cut(s)	336
TaaI	ACNGT	5 cut(s)	107, 310, 1579, 1762, 1865
TaiI	ACGT	3 cut(s)	216, 422, 1807
TaqI	TCGA	9 cut(s)	116, 144, 155, 171, 343, 728, 885, 1258, 1914
TaqII	GACCGA	1 cut(s)	2325
TatI	WGTACW	4 cut(s)	150, 216, 1246, 1579
TauI	GCSGC	2 cut(s)	165, 205
TfiI	GAWTC	3 cut(s)	399, 713, 796
Tru1I	TTAA	2 cut(s)	840, 1527
Tru9I	TTAA	2 cut(s)	840, 1527
TscAI	CASTG	1 cut(s)	313
TseI	GCWGC	6 cut(s)	99, 1085, 1292, 1331, 1346, 2135
TspGWI	ACGGA	2 cut(s)	665, 870
TspRI	CASTG	1 cut(s)	313
Tth111I	GACNNNGTC	1 cut(s)	656
VpaK11BI	GGWCC	1 cut(s)	2272
XagI	CCTNNNNNAGG	1 cut(s)	2042
XapI	RAATTY	1 cut(s)	251
XceI	RCATGY	2 cut(s)	1092, 1393
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2283
XmnI	GAANNNNTTC	1 cut(s)	122
XspI	CTAG	3 cut(s)	92, 936, 1749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.