Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0016785

Physical Location & Seq

Genomic Coordinates Reverse (-)

6988597 .. 6994091

Gene Structure 5495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g11830.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3789 bp

ATGTCAGGGTCAGCTGGAAGAAGAAAGAGGAAGATAAGATGGAGCAAGCTCTATTCCTATGGATGCTTCAGACCACCCTACACTCTTGATTCTGATCCTGGCCAGCAGCTACTGGGTCAACCCGGGTTTTCGCGTGTGGTTTTCTGCAACGAACCTCAGCTGCACAAGGCTAAGCCTTACAAGTACCCCAAGAACTATGTATCCACAACCAAGTACAGCATTGTGACATTTCTCCCCAAAGCGTTTTTCGAGCAGTTCCGCAGAGTTGCCAATCTTTATTTCCTTCTAGCTGCAGTTTTGTCCAGCACTTATTTGGCTCCATTTAATCGAATAAGTGTGATTGCTCCTTTGGTGTTTGTTGTGGGGGTTAGCATGATTAAAGAGGCTGTGGAGGATTGGCACAGATTCTTGCAGGATTTGAATGTGAATTCAAGAACTGTAAGTGCTCATGTTGGAGGTGGCTTATTTGTTGAAAAGACTTGGCAAGGACTTTGTGTTGGAGATGTTGTTAAAGTTAACAAGAATGAGTATTTTCCAAGTGATCTTCTCTTGCTGTCTTCTAGCTTTGAGGATGGCATATGTTATGTAGAGACCATGAACCTCGACGGAGAAACTAATCTGAAATGTAAGAGAAGCTTAGAAGCCACACTTGACTTGGCAAATGATCAAGCATTTAGTGGATTCAAGGCCACAATTCGCTGCGAGGATCCAAATCCTCATCTTTACACCTTTGTGGGGAATTTTGAGTTGAACAATGTAACACATCCCTTGTGCCCAGCCACACTGCTTCTAAGAGATTCAAAACTTAGAAATACTGATTACATTTATGGGGTTGTGGTCTTTAGTGGACCTGACACAAAAGCAGTGAGGAACTCAACAAGATCACCATCCAAGCGTAGTAGGATTGAAAGAAAGATGGATCTTGTCATTTACCTTCTCTTTTCAATGCTTCTTTTGATTTCAGTGGTCACTTCAACTGGTTTTGCAGTGTATCTGAAATCGGAAATGGCTAAGTGGTGGTATCTTTCTCTGCAAGATAATGATGATGAACTCTTCAAACTATCAAAGCCTCAAGTATCTGGTTTCTTTCAATTTGTAAGAGCTCTAATTTTATATGGCTACTTGATCCCCATTTCTCTCTATGTATCTATTGAGGTTGTCAAAGTTTTGCAAGCCATGCTCATTAACAAGGATATAGAGTTGTATGATGAAGTTACATGCAAGTCAGTTCAAACCAGAACATCCAACTTGAATGAAGAACTTGGTCAGGTAGAGATGATTCTGACGGATAAAACGGGGACTTTGACATGTAATCAGATGGAATTTAGGAAATGCTCTATTGCTGGAGTTTCATATGGGGGTAACGTTAATAAGATCGATTGTGCAGCATCGAAAAGGATGAATGTTGAGGTTGAGTCGTATCGTTTTAGTATGGATGAACTTGAAACAGCAAGTGAAAGCTTTGAAATGTTTGAGTTTTCTGTGGCGGATGCTAGCACCGAAAAAGCTGCTCTTGCTGGACATAAGCAGATGCAGAACTTGAGTGCAGAATGCTCGAGAATCTCTAGTGTGGAGGGAGAACCTGCCATTAAAGGCTTCAACTTTAGGGATGATAGGCTTATGAAAAGAAAGTGGATTTACAGGTCCAACTTATTTGATGTGACAATGTTCTTTAGAGTCATGGCTCTATGTCACACAGGCATACCTGTCGAGGGTGATCAGGCTCCAAAGCTAAAGTATGAGGCAGAGTCACCAGAAGAAGTATCTTTTCTAATTGCTGCACAAGAATTTGGATTTCAATTTTTTCAAAGAAGTCAATCCGTTATGCATCTCAAGGAGTTCGATCCGTCTTCTGGAAAGGTGGTTGAGAGGAAGTACAAACTTTTAAACCTTCTAGAGTTCTGCAGTGCCCGAAAGAGAATGTCAGTTATTGTAAGCAATGAAGATGGTGAAATCTTTCTCCTATGCAAAGGGGCAGATAACATTATCTTCGATATGCTTGCAGACAATGGTAGGTCTTACCAGCAAGCTACAACTCTACACCTTTCAGATTATGCAGAAGATGGATTTCGAACTCTAGCATTTGCTTATCGGAAACTTGATGCTGTCGAGTATGAAAAATGGAACTCAACATTTACCAAGGCTAAGACTACAATAGGTCCTGAAAGAGAAGAAGTACTCATAGAAGCATCTGCAATGATTGAAAAGGAATTAATTCTATTAGGGGTTGTTGCTGTTGAAGATAAGTTACAAAAAGGGGTTCCGGAATGCATAGATAAACTTGCACAAGCAGGAATTAAAATATGGCTGCTCACTGGTGACAAGAAAGAAACTGCAATAAATATTGGATTTGCTTGCAGCTTACTTCGGCAGGATATGAAACAGTTTCATCTGATTTTGGGCAAAAAAAGTGCAGCTAGTAACCGATTGAAGGAGATGAAGGAAGACATTTTAAACCAACTTGAAGGCTTTCAGAAAGTGAAGTCTGAAGAAGGCAACAAAGATGCACCCTTGGCTTTGATAGTAGATGGCAAAGCTCTTGAAATTGCTCTGAGAAGTGATGTGAAGGACCAGTTCTTACCGTTGGCCGTTGATTGTGCTTCTGTTATATGCTGCAGGGTGTCTCCAAAACAAAAGGCTCTGATTACTCGATTGGTAAAGAAGCATACAGGCAAGACAACCTTGGCAATTGGAGATGGGGCAAATGATGTTGGCATGATTCAAGAAGCTGATATTGGAGTAGGAATCAGTGGCATGGAAGGAATGCAGGCAGTCATGGCCAGTGACATCTCATTGCCTCAATTCCGATTCTTGGGGAGATTGCTTATTGTTCATGGGCACTGGTGTTACAAGAGGATTTCAAAAATGATTCTCTACTTTGTGTACAAGAACATTGCATTTGGCCTCACACTGTTTTACTATGAAGTATACACAAGGTTCTCAGGGGAGGTCTTATATGATGATTGGTATATGGCACTGTTCAATGTGATTTTGACATCTTTGCCTGTTATATCATTGGGGGTCCTTGAGCAGGATGTTTCATCAGAAGTGTGCCTCAAGTTTCCGGCTCTTTACCAACAAGGCCAAAAGAACATATACTTCACTTGGAGCCGCATCATCGGTTGGATACTCAACGGCATTGTAGCATCTCTAGTCATCTTCCTTGCAAACATATGCACTATTTCTACCTTCGACAAACATGGTATTGTTGCAGAGAAAGCCTTCAACAAAGATGGCCATGTCGCAGACATCACACACCTCGGCGCCATGACATATACATGCATTATCTGGACAGTCAACTGCCAGATAGCCCTCATCATCACCCACTTCACTTGGATCCAACATCTCTTCATATGGGGAAGCATCGTCATCTGGTACATCTTCCTGTTCTTCTACGGTGCGCTACCTCCTGCCATTTCTAATAGAGGCTTTCGTGTTCTTGTCGAAGCTCTTGGCCCTGCACCCATTTACTGGCTTGTCACATTGCTAGTTGTGGTAGCTGCTCTTCTTCCTTATTTCATCCACATTGCCATCCAAAGGTCGTTTTATCCATTAGATGACCATGTCATCCAAGAAATGAAGTTCTGCAGGAAAGATATTGGGAATAATAATCTGATCTGGGAGAGGGAACAGAACAACTCAGTGATGATGACCCAGATTGGATTTTCAGCTAGAGTTGATGCAAGGATTAAGATTATGAAGGAAAACTTGAACCAGAAGCGACAGTTGATATATAGATCAGTAACAAGCAGTCCAATATTTAGGTCACTAACAAGCAGTCCAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase Hydrolase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1263

Amino Acids

142.91

Weight (kDa)

8.32

Isoelectric Point (pI)

37.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	47 - 113	2.8e-21	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	556 - 752	1.4e-15	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	925 - 1184	1.6e-85	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016785)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11830
malus_domestica	MD10G1238400.v1.1
prunus_persica	Prupe.4G105900_v2.0.a1
pyrus_communis	pycom10g19940
rosa_chinensis	RchiOBHm_Chr5g0019261
rosa_laevigata	RLG00000032432
rosa_multiflora	Rmu_co8517133.1_g000001
rosa_roxburghii	Rroxscaffold_1G00058740
rosa_rugosa	Rorug05G0049000
rosa_samantha	Rh5AG140100 Rh5BG139100 Rh5CG150500 Rh5DG139700
rosa_wichuraiana	Rw5G012460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1591
AccB1I	GGYRCC	1 cut(s)	3263
AccB7I	CCANNNNNTGG	1 cut(s)	3471
AccI	GTMKAC	1 cut(s)	2928
AccII	CGCG	1 cut(s)	133
AccIII	TCCGGA	1 cut(s)	2263
AciI	CCGC	3 cut(s)	259, 1487, 3112
AclI	AACGTT	1 cut(s)	1365
AclWI	GGATC	8 cut(s)	89, 701, 714, 927, 1120, 1838, 3331, 3344
AcoI	YGGCCR	4 cut(s)	100, 2586, 2778, 3235
AcsI	RAATTY	4 cut(s)	427, 739, 1322, 1787
AcuI	CTGAAG	2 cut(s)	52, 2508
AcyI	GRCGYC	1 cut(s)	3264
AfaI	GTAC	6 cut(s)	185, 215, 1877, 2178, 2885, 3377
AfiI	CCNNNNNNNGG	8 cut(s)	735, 1712, 1853, 2431, 2812, 3031, 3471, 3537
AflIII	ACRYGT	1 cut(s)	1307
AjnI	CCWGG	1 cut(s)	97
AjuI	GAANNNNNNNTTGG	6 cut(s)	230, 262, 263, 295, 2718, 2750
AleI	CACNNNNGTG	1 cut(s)	731
AloI	GAACNNNNNNTCC	2 cut(s)	185, 217
Alw21I	GWGCWC	2 cut(s)	448, 1105
Alw26I	GTCTC	2 cut(s)	584, 2628
AlwI	GGATC	8 cut(s)	89, 701, 714, 927, 1120, 1838, 3331, 3344
AlwNI	CAGNNNCTG	1 cut(s)	112
Ama87I	CYCGRG	2 cut(s)	122, 1555
Aor13HI	TCCGGA	1 cut(s)	2263
AoxI	GGCC	8 cut(s)	100, 687, 2586, 2778, 2902, 3082, 3235, 3454
ApoI	RAATTY	4 cut(s)	427, 739, 1322, 1787
AseI	ATTAAT	1 cut(s)	2213
Asp700I	GAANNNNTTC	4 cut(s)	1956, 2214, 2469, 3221
AspLEI	GCGC	2 cut(s)	3266, 3403
AspS9I	GGNCC	6 cut(s)	848, 1644, 2159, 2569, 3022, 3455
AsuC2I	CCSGG	2 cut(s)	123, 124
AsuHPI	GGTGA	6 cut(s)	876, 1727, 1743, 1961, 2330, 3313
AsuII	TTCGAA	1 cut(s)	2071
AsuNHI	GCTAGC	1 cut(s)	1493
AvaI	CYCGRG	2 cut(s)	122, 1555
AvaII	GGWCC	5 cut(s)	848, 1644, 2159, 2569, 3022
BaeGI	GKGCMC	3 cut(s)	776, 1912, 2841
BalI	TGGCCA	3 cut(s)	102, 2780, 3237
BamHI	GGATCC	2 cut(s)	706, 3336
BanI	GGYRCC	1 cut(s)	3263
BanII	GRGCYC	1 cut(s)	1105
BarI	GAAGNNNNNNTAC	4 cut(s)	2232, 2264, 3489, 3521
BbsI	GAAGAC	3 cut(s)	549, 1842, 2451
Bbv12I	GWGCWC	2 cut(s)	448, 1105
BbvCI	CCTCAGC	1 cut(s)	156
BceAI	ACGGC	2 cut(s)	2573, 3151
BcgI	CGANNNNNNTGC	8 cut(s)	1490, 1524, 1536, 1570, 1690, 1724, 1982, 2016
BciT130I	CCWGG	1 cut(s)	99
BciVI	GTATCC	2 cut(s)	211, 3120
BclI	TGATCA	2 cut(s)	664, 1717
BcnI	CCSGG	2 cut(s)	123, 124
BcoDI	GTCTC	2 cut(s)	584, 2628
BfmI	CTRYAG	4 cut(s)	291, 1903, 2614, 3586
BfoI	RGCGCY	1 cut(s)	3267
BfuAI	ACCTGC	1 cut(s)	1591
BfuI	GTATCC	2 cut(s)	211, 3120
BlpI	GCTNAGC	1 cut(s)	171
BmcAI	AGTACT	1 cut(s)	2178
Bme1390I	CCNGG	3 cut(s)	99, 123, 124
Bme18I	GGWCC	5 cut(s)	848, 1644, 2159, 2569, 3022
BmeT110I	CYCGRG	2 cut(s)	122, 1555
BmgT120I	GGNCC	6 cut(s)	848, 1644, 2159, 2569, 3022, 3455
BmiI	GGNNCC	8 cut(s)	318, 708, 1725, 2262, 3023, 3110, 3265, 3338
BmrFI	CCNGG	3 cut(s)	99, 123, 124
BmrI	ACTGGG	1 cut(s)	122
BmtI	GCTAGC	1 cut(s)	1497
BmuI	ACTGGG	1 cut(s)	122
BpiI	GAAGAC	3 cut(s)	549, 1842, 2451
BpmI	CTGGAG	1 cut(s)	1365
Bpu10I	CCTNAGC	1 cut(s)	156
Bpu1102I	GCTNAGC	1 cut(s)	171
Bpu14I	TTCGAA	1 cut(s)	2071
BpuEI	CTTGAG	5 cut(s)	1056, 1561, 1817, 3041, 3047
BpuMI	CCSGG	2 cut(s)	123, 124
Bsa29I	ATCGAT	1 cut(s)	1377
BsaBI	GATNNNNATC	3 cut(s)	93, 711, 886
BsaHI	GRCGYC	1 cut(s)	3264
BsaI	GGTCTC	1 cut(s)	584
BsaJI	CCNNGG	5 cut(s)	122, 2139, 2511, 2682, 3259
BsaWI	WCCGGW	1 cut(s)	2263
BsaXI	ACNNNNNCTCC	2 cut(s)	492, 522
Bsc4I	CCNNNNNNNGG	8 cut(s)	735, 1712, 1853, 2431, 2812, 3031, 3471, 3537
Bse1I	ACTGG	7 cut(s)	117, 982, 2320, 2572, 2781, 2846, 3476
Bse3DI	GCAATG	6 cut(s)	1945, 2202, 2792, 2892, 3482, 3525
Bse8I	GATNNNNATC	3 cut(s)	93, 711, 886
BseAI	TCCGGA	1 cut(s)	2263
BseBI	CCWGG	1 cut(s)	99
BseCI	ATCGAT	1 cut(s)	1377
BseDI	CCNNGG	5 cut(s)	122, 2139, 2511, 2682, 3259
BseJI	GATNNNNATC	3 cut(s)	93, 711, 886
BseLI	CCNNNNNNNGG	8 cut(s)	735, 1712, 1853, 2431, 2812, 3031, 3471, 3537
BseMI	GCAATG	6 cut(s)	1945, 2202, 2792, 2892, 3482, 3525
BseMII	CTCAG	4 cut(s)	170, 2543, 2955, 3654
BseNI	ACTGG	7 cut(s)	117, 982, 2320, 2572, 2781, 2846, 3476
BseSI	GKGCMC	3 cut(s)	776, 1912, 2841
BseYI	CCCAGC	1 cut(s)	775
BsgI	GTGCAG	6 cut(s)	146, 1404, 1566, 1764, 2433, 3444
Bsh1236I	CGCG	1 cut(s)	133
BshFI	GGCC	8 cut(s)	102, 689, 2588, 2780, 2904, 3084, 3237, 3456
BshNI	GGYRCC	1 cut(s)	3263
BshVI	ATCGAT	1 cut(s)	1377
BsiHKAI	GWGCWC	2 cut(s)	448, 1105
BsiHKCI	CYCGRG	2 cut(s)	122, 1555
BsiSI	CCGG	3 cut(s)	123, 2264, 3065
BslFI	GGGAC	1 cut(s)	1312
BslI	CCNNNNNNNGG	8 cut(s)	735, 1712, 1853, 2431, 2812, 3031, 3471, 3537
BsmAI	GTCTC	2 cut(s)	584, 2628
BsmFI	GGGAC	1 cut(s)	1312
BsmI	GAATGC	3 cut(s)	1556, 2273, 2769
BsnI	GGCC	8 cut(s)	102, 689, 2588, 2780, 2904, 3084, 3237, 3456
Bso31I	GGTCTC	1 cut(s)	584
BsoBI	CYCGRG	2 cut(s)	122, 1555
Bsp119I	TTCGAA	1 cut(s)	2071
Bsp1286I	GDGCHC	5 cut(s)	448, 776, 1105, 1912, 2841
Bsp13I	TCCGGA	1 cut(s)	2263
Bsp1407I	TGTACA	1 cut(s)	2883
Bsp1720I	GCTNAGC	1 cut(s)	171
BspACI	CCGC	3 cut(s)	259, 1487, 3112
BspANI	GGCC	8 cut(s)	102, 689, 2588, 2780, 2904, 3084, 3237, 3456
BspCNI	CTCAG	4 cut(s)	169, 2544, 2954, 3653
BspDI	ATCGAT	1 cut(s)	1377
BspEI	TCCGGA	1 cut(s)	2263
BspFNI	CGCG	1 cut(s)	133
BspLI	GGNNCC	8 cut(s)	318, 708, 1725, 2262, 3023, 3110, 3265, 3338
BspMAI	CTGCAG	4 cut(s)	295, 1907, 2618, 3590
BspMI	ACCTGC	1 cut(s)	1591
BspOI	GCTAGC	1 cut(s)	1497
BspPI	GGATC	8 cut(s)	89, 701, 714, 927, 1120, 1838, 3331, 3344
BspQI	GCTCTTC	1 cut(s)	3510
BspT104I	TTCGAA	1 cut(s)	2071
BspT107I	GGYRCC	1 cut(s)	3263
BspTNI	GGTCTC	1 cut(s)	584
BsrDI	GCAATG	6 cut(s)	1945, 2202, 2792, 2892, 3482, 3525
BsrGI	TGTACA	1 cut(s)	2883
BsrI	ACTGG	7 cut(s)	117, 982, 2320, 2572, 2781, 2846, 3476
BssECI	CCNNGG	5 cut(s)	122, 2139, 2511, 2682, 3259
BssNAI	GTATAC	1 cut(s)	2929
BssNI	GRCGYC	1 cut(s)	3264
BssT1I	CCWWGG	3 cut(s)	2139, 2511, 2682
Bst1107I	GTATAC	1 cut(s)	2929
Bst2UI	CCWGG	1 cut(s)	99
Bst4CI	ACNGT	8 cut(s)	439, 2385, 2583, 2913, 2979, 3295, 3398, 3726
Bst6I	CTCTTC	3 cut(s)	1058, 3353, 3510
BstACI	GRCGYC	1 cut(s)	3264
BstAPI	GCANNNNNTGC	1 cut(s)	1177
BstAUI	TGTACA	1 cut(s)	2883
BstBI	TTCGAA	1 cut(s)	2071
BstC8I	GCNNGC	8 cut(s)	47, 104, 1173, 1495, 2001, 2028, 2356, 2769
BstENI	CCTNNNNNAGG	1 cut(s)	3029
BstFNI	CGCG	1 cut(s)	133
BstH2I	RGCGCY	1 cut(s)	3267
BstHHI	GCGC	2 cut(s)	3266, 3403
BstMAI	GTCTC	2 cut(s)	584, 2628
BstMWI	GCNNNNNNNGC	5 cut(s)	1177, 1514, 2513, 2777, 3218
BstNI	CCWGG	1 cut(s)	99
BstNSI	RCATGY	3 cut(s)	1221, 1311, 3282
BstSCI	CCNGG	3 cut(s)	97, 121, 122
BstSFI	CTRYAG	4 cut(s)	291, 1903, 2614, 3586
BstSLI	GKGCMC	3 cut(s)	776, 1912, 2841
BstUI	CGCG	1 cut(s)	133
BstV2I	GAAGAC	3 cut(s)	549, 1842, 2451
BstX2I	RGATCY	3 cut(s)	706, 919, 3336
BstYI	RGATCY	3 cut(s)	706, 919, 3336
BstZ17I	GTATAC	1 cut(s)	2929
Bsu15I	ATCGAT	1 cut(s)	1377
BsuI	GTATCC	2 cut(s)	211, 3120
BsuRI	GGCC	8 cut(s)	102, 689, 2588, 2780, 2904, 3084, 3237, 3456
BsuTUI	ATCGAT	1 cut(s)	1377
BtsI	GCAGTG	4 cut(s)	782, 870, 993, 1912
BveI	ACCTGC	1 cut(s)	1591
Cac8I	GCNNGC	8 cut(s)	47, 104, 1173, 1495, 2001, 2028, 2356, 2769
CaiI	CAGNNNCTG	1 cut(s)	112
CfoI	GCGC	2 cut(s)	3266, 3403
Cfr13I	GGNCC	6 cut(s)	848, 1644, 2159, 2569, 3022, 3455
Cfr9I	CCCGGG	1 cut(s)	122
ClaI	ATCGAT	1 cut(s)	1377
Csp6I	GTAC	6 cut(s)	184, 214, 1876, 2177, 2884, 3376
CspCI	CAANNNNNGTGG	2 cut(s)	3314, 3349
CviQI	GTAC	6 cut(s)	184, 214, 1876, 2177, 2884, 3376
DinI	GGCGCC	1 cut(s)	3265
DraI	TTTAAA	2 cut(s)	1887, 2454
EaeI	YGGCCR	4 cut(s)	100, 2586, 2778, 3235
Eam1104I	CTCTTC	3 cut(s)	1058, 3353, 3510
EarI	CTCTTC	3 cut(s)	1058, 3353, 3510
EciI	GGCGGA	1 cut(s)	1502
Ecl136II	GAGCTC	1 cut(s)	1103
Eco130I	CCWWGG	3 cut(s)	2139, 2511, 2682
Eco24I	GRGCYC	1 cut(s)	1105
Eco31I	GGTCTC	1 cut(s)	584
Eco47I	GGWCC	5 cut(s)	848, 1644, 2159, 2569, 3022
Eco53kI	GAGCTC	1 cut(s)	1103
Eco57I	CTGAAG	2 cut(s)	52, 2508
Eco88I	CYCGRG	2 cut(s)	122, 1555
EcoICRI	GAGCTC	1 cut(s)	1103
EcoNI	CCTNNNNNAGG	1 cut(s)	3029
EcoO109I	RGGNCCY	2 cut(s)	2159, 3022
EcoRI	GAATTC	1 cut(s)	427
EcoRII	CCWGG	1 cut(s)	97
EcoT14I	CCWWGG	3 cut(s)	2139, 2511, 2682
EcoT22I	ATGCAT	3 cut(s)	1830, 2273, 3284
EcoT38I	GRGCYC	1 cut(s)	1105
EgeI	GGCGCC	1 cut(s)	3265
EheI	GGCGCC	1 cut(s)	3265
ErhI	CCWWGG	3 cut(s)	2139, 2511, 2682
FaqI	GGGAC	1 cut(s)	1312
FauNDI	CATATG	4 cut(s)	578, 1354, 3173, 3353
FbaI	TGATCA	2 cut(s)	664, 1717
FblI	GTMKAC	1 cut(s)	2928
FriOI	GRGCYC	1 cut(s)	1105
GlaI	GCGC	2 cut(s)	3265, 3402
GsaI	CCCAGC	1 cut(s)	779
GsuI	CTGGAG	1 cut(s)	1365
HaeII	RGCGCY	1 cut(s)	3267
HaeIII	GGCC	8 cut(s)	102, 689, 2588, 2780, 2904, 3084, 3237, 3456
HapII	CCGG	3 cut(s)	123, 2264, 3065
HhaI	GCGC	2 cut(s)	3266, 3403
Hin1I	GRCGYC	1 cut(s)	3264
Hin6I	GCGC	2 cut(s)	3264, 3401
HinP1I	GCGC	2 cut(s)	3264, 3401
HincII	GTYRAC	3 cut(s)	119, 517, 3298
HindII	GTYRAC	3 cut(s)	119, 517, 3298
HindIII	AAGCTT	2 cut(s)	634, 1459
HpaI	GTTAAC	1 cut(s)	517
HpaII	CCGG	3 cut(s)	123, 2264, 3065
HphI	GGTGA	6 cut(s)	876, 1727, 1743, 1961, 2330, 3313
Hpy166II	GTNNAC	6 cut(s)	119, 517, 848, 2884, 2929, 3298
Hpy8I	GTNNAC	6 cut(s)	119, 517, 848, 2884, 2929, 3298
Hpy99I	CGWCG	1 cut(s)	608
HpyCH4III	ACNGT	8 cut(s)	439, 2385, 2583, 2913, 2979, 3295, 3398, 3726
HpyCH4IV	ACGT	1 cut(s)	1365
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1177, 1514, 2513, 2777, 3218
HpySE526I	ACGT	1 cut(s)	1365
Hsp92I	GRCGYC	1 cut(s)	3264
HspAI	GCGC	2 cut(s)	3264, 3401
KasI	GGCGCC	1 cut(s)	3263
Kpn2I	TCCGGA	1 cut(s)	2263
Ksp22I	TGATCA	2 cut(s)	664, 1717
KspAI	GTTAAC	1 cut(s)	517
LguI	GCTCTTC	1 cut(s)	3510
LmnI	GCTCC	5 cut(s)	42, 322, 349, 1729, 3108
MaeII	ACGT	1 cut(s)	1365
MfeI	CAATTG	1 cut(s)	2688
MflI	RGATCY	3 cut(s)	706, 919, 3336
MhlI	GDGCHC	5 cut(s)	448, 776, 1105, 1912, 2841
MlsI	TGGCCA	3 cut(s)	102, 2780, 3237
MluNI	TGGCCA	3 cut(s)	102, 2780, 3237
Mly113I	GGCGCC	1 cut(s)	3264
MlyI	GAGTC	3 cut(s)	1424, 1686, 1757
MmeI	TCCRAC	6 cut(s)	433, 478, 1269, 1671, 3104, 3364
Mox20I	TGGCCA	3 cut(s)	102, 2780, 3237
Mph1103I	ATGCAT	3 cut(s)	1830, 2273, 3284
MroI	TCCGGA	1 cut(s)	2263
MroXI	GAANNNNTTC	4 cut(s)	1956, 2214, 2469, 3221
MscI	TGGCCA	3 cut(s)	102, 2780, 3237
MslI	CAYNNNNRTG	2 cut(s)	731, 3277
Msp20I	TGGCCA	3 cut(s)	102, 2780, 3237
MspA1I	CMGCKG	2 cut(s)	14, 160
MspI	CCGG	3 cut(s)	123, 2264, 3065
MspR9I	CCNGG	3 cut(s)	99, 123, 124
MunI	CAATTG	1 cut(s)	2688
Mva1269I	GAATGC	3 cut(s)	1556, 2273, 2769
MvaI	CCWGG	1 cut(s)	99
MvnI	CGCG	1 cut(s)	133
MwoI	GCNNNNNNNGC	5 cut(s)	1177, 1514, 2513, 2777, 3218
NarI	GGCGCC	1 cut(s)	3264
NciI	CCSGG	2 cut(s)	123, 124
NdeI	CATATG	4 cut(s)	578, 1354, 3173, 3353
NheI	GCTAGC	1 cut(s)	1493
NlaIV	GGNNCC	8 cut(s)	318, 708, 1725, 2262, 3023, 3110, 3265, 3338
NmeAIII	GCCGAG	1 cut(s)	3240
NmuCI	GTSAC	9 cut(s)	223, 967, 1660, 1691, 1749, 2318, 2783, 3478, 3765
NsiI	ATGCAT	3 cut(s)	1830, 2273, 3284
NspI	RCATGY	3 cut(s)	1221, 1311, 3282
NspV	TTCGAA	1 cut(s)	2071
OliI	CACNNNNGTG	1 cut(s)	731
PaeR7I	CTCGAG	1 cut(s)	1555
PciI	ACATGT	1 cut(s)	1307
PciSI	GCTCTTC	1 cut(s)	3510
PctI	GAATGC	3 cut(s)	1556, 2273, 2769
PdmI	GAANNNNTTC	4 cut(s)	1956, 2214, 2469, 3221
PflFI	GACNNNGTC	1 cut(s)	3563
PflMI	CCANNNNNTGG	1 cut(s)	3471
PleI	GAGTC	3 cut(s)	1423, 1685, 1756
PluTI	GGCGCC	1 cut(s)	3267
PpsI	GAGTC	3 cut(s)	1423, 1685, 1756
PpuMI	RGGWCCY	2 cut(s)	2159, 3022
PscI	ACATGT	1 cut(s)	1307
PshBI	ATTAAT	1 cut(s)	2213
Psp124BI	GAGCTC	1 cut(s)	1105
Psp1406I	AACGTT	1 cut(s)	1365
Psp5II	RGGWCCY	2 cut(s)	2159, 3022
Psp6I	CCWGG	1 cut(s)	97
PspFI	CCCAGC	1 cut(s)	775
PspGI	CCWGG	1 cut(s)	97
PspN4I	GGNNCC	8 cut(s)	318, 708, 1725, 2262, 3023, 3110, 3265, 3338
PspPI	GGNCC	6 cut(s)	848, 1644, 2159, 2569, 3022, 3455
PspPPI	RGGWCCY	2 cut(s)	2159, 3022
PstI	CTGCAG	4 cut(s)	295, 1907, 2618, 3590
PstNI	CAGNNNCTG	1 cut(s)	112
PsuI	RGATCY	3 cut(s)	706, 919, 3336
PsyI	GACNNNGTC	1 cut(s)	3563
PvuII	CAGCTG	2 cut(s)	14, 160
RsaI	GTAC	6 cut(s)	185, 215, 1877, 2178, 2885, 3377
RsaNI	GTAC	6 cut(s)	184, 214, 1876, 2177, 2884, 3376
RseI	CAYNNNNRTG	2 cut(s)	731, 3277
SacI	GAGCTC	1 cut(s)	1105
SapI	GCTCTTC	1 cut(s)	3510
Sau96I	GGNCC	6 cut(s)	848, 1644, 2159, 2569, 3022, 3455
ScaI	AGTACT	1 cut(s)	2178
SchI	GAGTC	3 cut(s)	1424, 1686, 1757
ScrFI	CCNGG	3 cut(s)	99, 123, 124
SduI	GDGCHC	5 cut(s)	448, 776, 1105, 1912, 2841
SfcI	CTRYAG	4 cut(s)	291, 1903, 2614, 3586
SfoI	GGCGCC	1 cut(s)	3265
Sfr274I	CTCGAG	1 cut(s)	1555
SfuI	TTCGAA	1 cut(s)	2071
SinI	GGWCC	5 cut(s)	848, 1644, 2159, 2569, 3022
SlaI	CTCGAG	1 cut(s)	1555
SmaI	CCCGGG	1 cut(s)	124
SmiMI	CAYNNNNRTG	2 cut(s)	731, 3277
SmlI	CTYRAG	6 cut(s)	1071, 1540, 1555, 1832, 3026, 3056
SmoI	CTYRAG	6 cut(s)	1071, 1540, 1555, 1832, 3026, 3056
SsiI	CCGC	3 cut(s)	259, 1487, 3112
SspDI	GGCGCC	1 cut(s)	3263
SspI	AATATT	2 cut(s)	2344, 3759
SstI	GAGCTC	1 cut(s)	1105
StyD4I	CCNGG	3 cut(s)	97, 121, 122
StyI	CCWWGG	3 cut(s)	2139, 2511, 2682
TaaI	ACNGT	8 cut(s)	439, 2385, 2583, 2913, 2979, 3295, 3398, 3726
TaiI	ACGT	1 cut(s)	1368
TatI	WGTACW	4 cut(s)	213, 1875, 2176, 2883
TauI	GCSGC	1 cut(s)	3114
TseFI	GTSAC	9 cut(s)	223, 967, 1660, 1691, 1749, 2318, 2783, 3478, 3765
Tsp45I	GTSAC	9 cut(s)	223, 967, 1660, 1691, 1749, 2318, 2783, 3478, 3765
TspGWI	ACGGA	4 cut(s)	621, 1301, 1810, 1836
TspMI	CCCGGG	1 cut(s)	122
Tth111I	GACNNNGTC	1 cut(s)	3563
Van91I	CCANNNNNTGG	1 cut(s)	3471
VpaK11BI	GGWCC	5 cut(s)	848, 1644, 2159, 2569, 3022
VspI	ATTAAT	1 cut(s)	2213
XagI	CCTNNNNNAGG	1 cut(s)	3029
XapI	RAATTY	4 cut(s)	427, 739, 1322, 1787
XbaI	TCTAGA	1 cut(s)	1894
XceI	RCATGY	3 cut(s)	1221, 1311, 3282
XcmI	CCANNNNNNNNNTGG	2 cut(s)	310, 652
XhoI	CTCGAG	1 cut(s)	1555
XmaI	CCCGGG	1 cut(s)	122
XmiI	GTMKAC	1 cut(s)	2928
XmnI	GAANNNNTTC	4 cut(s)	1956, 2214, 2469, 3221
ZrmI	AGTACT	1 cut(s)	2178
Zsp2I	ATGCAT	3 cut(s)	1830, 2273, 3284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.