Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0016785

Physical Location & Seq

Genomic Coordinates Forward (+)

80725591 .. 80730807

Gene Structure 5217 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00058740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3276 bp

ATGTCAGGGTCATCTGGAAGAAGAAAGAGGAAGATAAAATGGAGCAAGCTGTATTCCTATGGATGCTTCAGACCACCCCACACTCTTGATTCTGATCCTGGCCAACAGCTACTGGGTCAACCGGGGTTTTCACGGGTTGTTTTCTGCAATGAACCTCAGCTGCACAAGGCTAAGCCTTACAAGTACCCCAAGAACTATGTATCCACAACCAAGTACAACATTGTCACTTTTCTTCCCAAAGCTCTTTTCGAGCAGTTTCGCAGAGTTGCCAATCTTTATTTTCTTCTAGCAGCAGTTTTGTCTCTCAAATCTTTCGCTCCCTTTAATCCAATAAGTTTGATTGCTCCTTTGGTGTTTGTTGTGGGAGTTAGCATGATTAAAGAGGCTGTCGAGGATTGGCACCGATTCTTGCAGGATTTGAATGTGAATTCAAGAACTGTAAGGGCTCATGTTGGAGGTGGCTTATTTGTTGAAAAGACATGGCAAGGACTTTGTGTTGGAGATGTTGTTAAAGTTAACAAGAATGAATATTTTCCAAGTGATCTTCTCTTGCTATCTTCTAGCTTTGAGGATGGTATATGTTATGTCGAGACCATGAACCTCGATGGAGAAACTAATCTGAAAGTTAAGAGAAGCACAGAAGCCACACTTGACTTGGCAAATGATCAAGCATTTAGTGAATTCAAGGCCACAATTCGCTGTGAGGATCCAAATCCTCATCTTTACACCTTTGTTGGGAATTTAGAGTTGAACAGTGTAACACATCCCTTGTGCCCTGCCACACTGCTTCTAAGAGATTCGAAACTTAGAAATACTGATTACATTTATGGGGTCGTGATCTTTAGTGGACCTGACACAAAAGCAGTGAGGAACTCAACAAGATCACCATCCAAGCGTAGTCGGATTGAAAGAAAGATGGATCTTGTCATTTACCTTCTCTTTTCAATGCTTCTTCTCATTTCACTCATCACTTCAACTGGTTTCGCAGTGATTCTGAAATCACAAATGGTCAAGTGGTGGTACCTTTCTCTGCAAGATGATGATCTACTCTTTAAACCATTAAAGCCTGGAGTATCTGGTTTCCTACAATTTGTAAGGGCCCTTATTTTGTATGGCTACTTGATCCCCATTTCTCTCTATGTCTCTATAGAGGTTGTCAAAGTTTTGCAAGCCATGCTCATTAACAAGGATATAGAGTTGTATGACGAAGTTACATGCAAGTCAGTTCAAACCAGAACATCCAACTTGAATGAAGAACTTGGTCAAGTAGAGATGATTCTGACGGATAAAACGGGGACTTTGACGTGTAATCAGATGGAATTTAGGAAATGCTCTATTGCTGGAGCTTCATATGGGGGTAACATCAATAATATCGATCGTGCAGCATCTAAAAGGATGAATGTTGAGGTTGAGTCGTATCGTTTTAGTATGGATGAATTTGAAACACAATGCCAAAGCTTTGAAATGTTTGACTTTTCAGTGGCGGATGTTGGCACTGAAAAAGCTGCTCTTGCTGGACAGAAGCACATGCAGAACTCGAGTGCAGACTGTTCCAGAATCTCTAGTGCGGAGGGAGAACCTGCCATCAAAGGTTTCAACTTTAGGGATGATAGGCTTATGAACAGAAAGTGGGTTTATAGGTCCAACTTATTTGATGTAACAATGTTCTTTAGAGTAATGGCTCTATGTCACACAGGCATACCTGTTGATGGTGATCAGGCTCATAAGCTAAAGTATGAGGCAGAGTCACCAGAAGAAGTATCTTTTCTAATTGCTGCGCAAGAGTTTGGATTTCAATTTTTTCAAAGAAGTCAGTCCGTTATGTATCTCAAGGAGTTTGATCCGTCCTCTGGAAAGGTGGTTGAGAGCATTATCTTTGATAGACTTGCAGACAATGGTAGGTCTTACCAACAGGCTACAACTCTACACCTTTCAGATTATGCAGAAGATGGATTTCGAACTCTAGCATTTGCTTATCGAAAACTTGATGCTGTCGAGTATGAAAAATGGAACTCAATATTTACTGAGGCTAAGACCACAATAGGTCCTGAAAGAGAAGAAGTACTAATAGAAGCATCTGAAATGATTGAAAAGGATTTAATTCTATTAGGGGTTGCTGCTGTTGAAGACAAGTTACAAAAAGGGGAGATGAAGGAAGACATTTTAAACCAACTTGAAGGCTTTCAGAAAGTGAAGTCTGAAGAAAGCAACAAAGATGCACCCTTGGCTTTGATAGTAGATGGAAAAGCTCTTGAAATTGCTCTGAGAAGTGATGTGAAGGACCAGTTCTTACCGTTGGCCGTTGATTGTGCTTCTGTTATATGCTGCAGGGTGTCTCCAAAACAAAAGGCTCTGATTCTCTACTTTGTGTACAAAAACATTGCATTTGGCCTCACACTGTTCTACTATGAAGTATATACAAGTTTCTCAGGGGAGGTCTTATATGATGACTGGTATATGGCACTATTCAATGTAATTTTGACATCTTTGCCTGTTATATCATTGGGAGTCCTTGAGCAAGATGTTTCATCCGAAGTGTGCCTCAAGTTTCCGGCGCTCTACCAACAGGGCCAAAAGAACATATACTTCACTTGGAGCCGGATCATCGGTTGGATACTCAACGGCATTGTAGCATCTCTAGTCATCTTCCTTGCAAACATATGCACACTTTCTACCTTCAACAAAGATGGTAGTTTTGCAGAGAAAGCCTTCGCCAAAGATGGTAAAGTTGCAGACATCACACACCTCGGTGCCATGACATACACATGCATAATCTGGACAGTTAATTGCCAGATATCCCTCATCATCACCCACTTCACTTGGATCCAACATCTCTTCATATGGGGCAGCATCATCATCTGGTACATCTTCCTGTTCATCTACGGTGCGCTACCTCCTGACATTTCGAAAAGAGGCTTTCGTGTTCTTGCAGAAGCTCTTGGCCCTGCACCCATTTACTGGCTTGTCACATTGCTAGTTGTGGTTGTTGCTCTTCTTCCTTATTTCATCCACATTGCGATCCAACGGTCGTTTTATCCTCTGGATGACCATGTGATTCAAGAAATGAAGTATTGCAGGAAAGATATTGGGAATAATAATCTAATTTGGGAGAGGGAGCAGAACAACTCAGTGGTGATGACCCAGATAGGATTTTCGGCTAGAGTTGATGCAAGGATTCGGATTATGAAGGAAAACTTGAACCAGAAGGGACAGTTGATATATAGATCAGTAACAAGCAGTCCAATATTTAGGTCACTGACAAGCAGTCCAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase Hydrolase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1091

Amino Acids

123.84

Weight (kDa)

6.61

Isoelectric Point (pI)

38.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	47 - 113	1.1e-22	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	637 - 714	6.2e-06	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	784 - 1013	3.5e-65	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016785)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11830
malus_domestica	MD10G1238400.v1.1
prunus_persica	Prupe.4G105900_v2.0.a1
pyrus_communis	pycom10g19940
rosa_chinensis	RchiOBHm_Chr5g0019261
rosa_laevigata	RLG00000032432
rosa_multiflora	Rmu_co8517133.1_g000001
rosa_roxburghii	Rroxscaffold_1G00058740
rosa_rugosa	Rorug05G0049000
rosa_samantha	Rh5AG140100 Rh5BG139100 Rh5CG150500 Rh5DG139700
rosa_wichuraiana	Rw5G012460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1779
Acc36I	ACCTGC	1 cut(s)	1588
Acc65I	GGTACC	1 cut(s)	1020
AccB1I	GGYRCC	3 cut(s)	399, 1020, 2750
AccB7I	CCANNNNNTGG	1 cut(s)	2958
AciI	CCGC	2 cut(s)	1484, 1568
AcoI	YGGCCR	2 cut(s)	100, 2298
AcsI	RAATTY	5 cut(s)	427, 680, 739, 1319, 1436
AcuI	CTGAAG	2 cut(s)	52, 2220
AfaI	GTAC	6 cut(s)	185, 215, 1022, 2064, 2372, 2864
AfiI	CCNNNNNNNGG	4 cut(s)	735, 1709, 1850, 2958
AflIII	ACRYGT	1 cut(s)	1304
AhdI	GACNNNNNGTC	1 cut(s)	3264
AjiI	CACGTC	1 cut(s)	1305
AjnI	CCWGG	2 cut(s)	97, 1066
AjuI	GAANNNNNNNTTGG	2 cut(s)	230, 262
AleI	CACNNNNGTG	1 cut(s)	2748
AloI	GAACNNNNNNTCC	2 cut(s)	185, 217
Alw26I	GTCTC	4 cut(s)	306, 584, 1147, 2340
AlwNI	CAGNNNCTG	1 cut(s)	112
Ama87I	CYCGRG	1 cut(s)	1537
AoxI	GGCC	7 cut(s)	100, 687, 1098, 2298, 2389, 2569, 2941
ApaI	GGGCCC	1 cut(s)	1102
ApeKI	GCWGC	8 cut(s)	160, 290, 1382, 1505, 1775, 2117, 2325, 2847
ApoI	RAATTY	5 cut(s)	427, 680, 739, 1319, 1436
Asp700I	GAANNNNTTC	3 cut(s)	531, 2181, 2708
Asp718I	GGTACC	1 cut(s)	1020
AspLEI	GCGC	3 cut(s)	1780, 2557, 2890
AspS9I	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2045, 2281, 2569, 2942
AsuC2I	CCSGG	1 cut(s)	123
AsuHPI	GGTGA	5 cut(s)	876, 1724, 1740, 2800, 3145
AsuII	TTCGAA	3 cut(s)	800, 1957, 2906
AvaI	CYCGRG	1 cut(s)	1537
AvaII	GGWCC	4 cut(s)	848, 1641, 2045, 2281
BaeGI	GKGCMC	2 cut(s)	776, 1102
BalI	TGGCCA	1 cut(s)	102
BamHI	GGATCC	2 cut(s)	706, 2823
BanI	GGYRCC	3 cut(s)	399, 1020, 2750
BanII	GRGCYC	2 cut(s)	448, 1102
BarI	GAAGNNNNNNTAC	2 cut(s)	2118, 2150
BbsI	GAAGAC	2 cut(s)	2133, 2163
BbvCI	CCTCAGC	1 cut(s)	156
BbvI	GCAGC	8 cut(s)	147, 302, 1394, 1492, 1762, 2104, 2312, 2859
BceAI	ACGGC	2 cut(s)	2285, 2638
BciT130I	CCWGG	2 cut(s)	99, 1068
BciVI	GTATCC	2 cut(s)	211, 2607
BclI	TGATCA	2 cut(s)	664, 1714
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	4 cut(s)	306, 584, 1147, 2340
BfaI	CTAG	7 cut(s)	287, 561, 1563, 1964, 2639, 2975, 3159
BfmI	CTRYAG	2 cut(s)	1146, 2326
BfoI	RGCGCY	1 cut(s)	2558
BfuAI	ACCTGC	1 cut(s)	1588
BfuI	GTATCC	2 cut(s)	211, 2607
BisI	GCNGC	8 cut(s)	161, 291, 1383, 1506, 1776, 2118, 2326, 2848
BlpI	GCTNAGC	1 cut(s)	171
BlsI	GCNGC	8 cut(s)	162, 292, 1384, 1507, 1777, 2119, 2327, 2849
BmcAI	AGTACT	1 cut(s)	2064
Bme1390I	CCNGG	3 cut(s)	99, 123, 1068
Bme18I	GGWCC	4 cut(s)	848, 1641, 2045, 2281
BmeRI	GACNNNNNGTC	1 cut(s)	3264
BmeT110I	CYCGRG	1 cut(s)	1537
BmgBI	CACGTC	1 cut(s)	1305
BmgT120I	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2045, 2281, 2569, 2942
BmiI	GGNNCC	7 cut(s)	401, 708, 1022, 1100, 2597, 2752, 2825
BmrFI	CCNGG	3 cut(s)	99, 123, 1068
BmrI	ACTGGG	1 cut(s)	122
BmsI	GCATC	8 cut(s)	53, 1394, 1978, 2084, 2206, 2642, 2859, 3157
BmuI	ACTGGG	1 cut(s)	122
BpiI	GAAGAC	2 cut(s)	2133, 2163
BpmI	CTGGAG	2 cut(s)	1089, 1362
Bpu10I	CCTNAGC	1 cut(s)	156
Bpu1102I	GCTNAGC	1 cut(s)	171
Bpu14I	TTCGAA	3 cut(s)	800, 1957, 2906
BpuEI	CTTGAG	3 cut(s)	1814, 2528, 2534
BpuMI	CCSGG	1 cut(s)	123
Bsa29I	ATCGAT	1 cut(s)	1374
BsaBI	GATNNNNATC	5 cut(s)	93, 711, 886, 1041, 1713
BsaI	GGTCTC	1 cut(s)	584
BsaJI	CCNNGG	3 cut(s)	122, 2223, 2746
BsaXI	ACNNNNNCTCC	2 cut(s)	492, 522
Bsc4I	CCNNNNNNNGG	4 cut(s)	735, 1709, 1850, 2958
Bse1I	ACTGG	5 cut(s)	117, 982, 2284, 2456, 2963
Bse3DI	GCAATG	4 cut(s)	154, 2379, 2969, 3012
Bse8I	GATNNNNATC	5 cut(s)	93, 711, 886, 1041, 1713
BseBI	CCWGG	2 cut(s)	99, 1068
BseCI	ATCGAT	1 cut(s)	1374
BseDI	CCNNGG	3 cut(s)	122, 2223, 2746
BseJI	GATNNNNATC	5 cut(s)	93, 711, 886, 1041, 1713
BseLI	CCNNNNNNNGG	4 cut(s)	735, 1709, 1850, 2958
BseMI	GCAATG	4 cut(s)	154, 2379, 2969, 3012
BseMII	CTCAG	5 cut(s)	170, 2016, 2255, 2442, 3141
BseNI	ACTGG	5 cut(s)	117, 982, 2284, 2456, 2963
BseSI	GKGCMC	2 cut(s)	776, 1102
BseXI	GCAGC	8 cut(s)	147, 302, 1394, 1492, 1762, 2104, 2312, 2859
BsgI	GTGCAG	4 cut(s)	146, 1401, 1563, 2931
Bsh1285I	CGRYCG	2 cut(s)	1378, 3029
BshFI	GGCC	7 cut(s)	102, 689, 1100, 2300, 2391, 2571, 2943
BshNI	GGYRCC	3 cut(s)	399, 1020, 2750
BshVI	ATCGAT	1 cut(s)	1374
BsiEI	CGRYCG	2 cut(s)	1378, 3029
BsiHKCI	CYCGRG	1 cut(s)	1537
BsiSI	CCGG	3 cut(s)	122, 2552, 2599
BslFI	GGGAC	2 cut(s)	1309, 3222
BslI	CCNNNNNNNGG	4 cut(s)	735, 1709, 1850, 2958
BsmAI	GTCTC	4 cut(s)	306, 584, 1147, 2340
BsmFI	GGGAC	2 cut(s)	1309, 3222
BsnI	GGCC	7 cut(s)	102, 689, 1100, 2300, 2391, 2571, 2943
Bso31I	GGTCTC	1 cut(s)	584
BsoBI	CYCGRG	1 cut(s)	1537
Bsp119I	TTCGAA	3 cut(s)	800, 1957, 2906
Bsp120I	GGGCCC	1 cut(s)	1098
Bsp1286I	GDGCHC	3 cut(s)	448, 776, 1102
Bsp1407I	TGTACA	1 cut(s)	2370
Bsp1720I	GCTNAGC	1 cut(s)	171
BspACI	CCGC	2 cut(s)	1484, 1568
BspANI	GGCC	7 cut(s)	102, 689, 1100, 2300, 2391, 2571, 2943
BspCNI	CTCAG	5 cut(s)	169, 2017, 2256, 2441, 3140
BspDI	ATCGAT	1 cut(s)	1374
BspLI	GGNNCC	7 cut(s)	401, 708, 1022, 1100, 2597, 2752, 2825
BspMAI	CTGCAG	1 cut(s)	2330
BspMI	ACCTGC	1 cut(s)	1588
BspQI	GCTCTTC	1 cut(s)	2997
BspT104I	TTCGAA	3 cut(s)	800, 1957, 2906
BspT107I	GGYRCC	3 cut(s)	399, 1020, 2750
BspTNI	GGTCTC	1 cut(s)	584
BsrDI	GCAATG	4 cut(s)	154, 2379, 2969, 3012
BsrGI	TGTACA	1 cut(s)	2370
BsrI	ACTGG	5 cut(s)	117, 982, 2284, 2456, 2963
BssECI	CCNNGG	3 cut(s)	122, 2223, 2746
BssT1I	CCWWGG	1 cut(s)	2223
Bst2UI	CCWGG	2 cut(s)	99, 1068
Bst4CI	ACNGT	9 cut(s)	439, 755, 1550, 2295, 2400, 2782, 2885, 3027, 3213
Bst6I	CTCTTC	2 cut(s)	2840, 2997
BstAPI	GCANNNNNTGC	1 cut(s)	1174
BstAUI	TGTACA	1 cut(s)	2370
BstBI	TTCGAA	3 cut(s)	800, 1957, 2906
BstC8I	GCNNGC	2 cut(s)	47, 1170
BstDEI	CTNAG	9 cut(s)	156, 171, 791, 806, 2025, 2031, 2264, 2428, 3127
BstH2I	RGCGCY	1 cut(s)	2558
BstHHI	GCGC	3 cut(s)	1780, 2557, 2890
BstMAI	GTCTC	4 cut(s)	306, 584, 1147, 2340
BstMCI	CGRYCG	2 cut(s)	1378, 3029
BstMWI	GCNNNNNNNGC	4 cut(s)	1174, 1511, 2225, 2705
BstNI	CCWGG	2 cut(s)	99, 1068
BstNSI	RCATGY	3 cut(s)	1218, 1531, 2769
BstSCI	CCNGG	3 cut(s)	97, 121, 1066
BstSFI	CTRYAG	2 cut(s)	1146, 2326
BstSLI	GKGCMC	2 cut(s)	776, 1102
BstV1I	GCAGC	8 cut(s)	147, 302, 1394, 1492, 1762, 2104, 2312, 2859
BstV2I	GAAGAC	2 cut(s)	2133, 2163
BstX2I	RGATCY	3 cut(s)	706, 919, 2823
BstYI	RGATCY	3 cut(s)	706, 919, 2823
Bsu15I	ATCGAT	1 cut(s)	1374
BsuI	GTATCC	2 cut(s)	211, 2607
BsuRI	GGCC	7 cut(s)	102, 689, 1100, 2300, 2391, 2571, 2943
BsuTUI	ATCGAT	1 cut(s)	1374
BtrI	CACGTC	1 cut(s)	1305
BtsI	GCAGTG	3 cut(s)	782, 870, 993
BtsIMutI	CAGTG	9 cut(s)	760, 782, 870, 993, 1485, 1494, 2396, 3135, 3254
BveI	ACCTGC	1 cut(s)	1588
Cac8I	GCNNGC	2 cut(s)	47, 1170
CaiI	CAGNNNCTG	1 cut(s)	112
CfoI	GCGC	3 cut(s)	1780, 2557, 2890
Cfr13I	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2045, 2281, 2569, 2942
ClaI	ATCGAT	1 cut(s)	1374
Csp6I	GTAC	6 cut(s)	184, 214, 1021, 2063, 2371, 2863
CspCI	CAANNNNNGTGG	2 cut(s)	2801, 2836
CviQI	GTAC	6 cut(s)	184, 214, 1021, 2063, 2371, 2863
DdeI	CTNAG	9 cut(s)	156, 171, 791, 806, 2025, 2031, 2264, 2428, 3127
DraI	TTTAAA	2 cut(s)	1054, 2166
DriI	GACNNNNNGTC	1 cut(s)	3264
EaeI	YGGCCR	2 cut(s)	100, 2298
Eam1104I	CTCTTC	2 cut(s)	2840, 2997
Eam1105I	GACNNNNNGTC	1 cut(s)	3264
EarI	CTCTTC	2 cut(s)	2840, 2997
EciI	GGCGGA	1 cut(s)	1499
Eco130I	CCWWGG	1 cut(s)	2223
Eco24I	GRGCYC	2 cut(s)	448, 1102
Eco31I	GGTCTC	1 cut(s)	584
Eco32I	GATATC	1 cut(s)	2796
Eco47I	GGWCC	4 cut(s)	848, 1641, 2045, 2281
Eco57I	CTGAAG	2 cut(s)	52, 2220
Eco88I	CYCGRG	1 cut(s)	1537
EcoO109I	RGGNCCY	3 cut(s)	1098, 1099, 2045
EcoRI	GAATTC	2 cut(s)	427, 680
EcoRII	CCWGG	2 cut(s)	97, 1066
EcoRV	GATATC	1 cut(s)	2796
EcoT14I	CCWWGG	1 cut(s)	2223
EcoT22I	ATGCAT	1 cut(s)	2771
EcoT38I	GRGCYC	2 cut(s)	448, 1102
ErhI	CCWWGG	1 cut(s)	2223
FalI	AAGNNNNNCTT	6 cut(s)	633, 665, 1494, 1526, 3179, 3211
FaqI	GGGAC	2 cut(s)	1309, 3222
FauNDI	CATATG	3 cut(s)	1351, 2660, 2840
FbaI	TGATCA	2 cut(s)	664, 1714
Fnu4HI	GCNGC	8 cut(s)	161, 291, 1383, 1506, 1776, 2118, 2326, 2848
FriOI	GRGCYC	2 cut(s)	448, 1102
Fsp4HI	GCNGC	8 cut(s)	161, 291, 1383, 1506, 1776, 2118, 2326, 2848
FspBI	CTAG	7 cut(s)	287, 561, 1563, 1964, 2639, 2975, 3159
FspI	TGCGCA	1 cut(s)	1779
GlaI	GCGC	3 cut(s)	1779, 2556, 2889
GluI	GCNGC	8 cut(s)	161, 291, 1383, 1506, 1776, 2118, 2326, 2848
GsuI	CTGGAG	2 cut(s)	1089, 1362
HaeII	RGCGCY	1 cut(s)	2558
HaeIII	GGCC	7 cut(s)	102, 689, 1100, 2300, 2391, 2571, 2943
HapII	CCGG	3 cut(s)	122, 2552, 2599
HhaI	GCGC	3 cut(s)	1780, 2557, 2890
Hin6I	GCGC	3 cut(s)	1778, 2555, 2888
HinP1I	GCGC	3 cut(s)	1778, 2555, 2888
HincII	GTYRAC	2 cut(s)	119, 517
HindII	GTYRAC	2 cut(s)	119, 517
HindIII	AAGCTT	1 cut(s)	1456
HpaI	GTTAAC	1 cut(s)	517
HpaII	CCGG	3 cut(s)	122, 2552, 2599
HphI	GGTGA	5 cut(s)	876, 1724, 1740, 2800, 3145
Hpy166II	GTNNAC	4 cut(s)	119, 517, 848, 2371
Hpy8I	GTNNAC	4 cut(s)	119, 517, 848, 2371
HpyAV	CCTTC	8 cut(s)	944, 2146, 2171, 2272, 2686, 2719, 3181, 3199
HpyCH4III	ACNGT	9 cut(s)	439, 755, 1550, 2295, 2400, 2782, 2885, 3027, 3213
HpyCH4IV	ACGT	1 cut(s)	1304
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1174, 1511, 2225, 2705
HpyF3I	CTNAG	9 cut(s)	156, 171, 791, 806, 2025, 2031, 2264, 2428, 3127
HpySE526I	ACGT	1 cut(s)	1304
HspAI	GCGC	3 cut(s)	1778, 2555, 2888
KpnI	GGTACC	1 cut(s)	1024
Ksp22I	TGATCA	2 cut(s)	664, 1714
KspAI	GTTAAC	1 cut(s)	517
LguI	GCTCTTC	1 cut(s)	2997
LmnI	GCTCC	6 cut(s)	42, 322, 349, 1343, 2595, 3115
Lsp1109I	GCAGC	8 cut(s)	147, 302, 1394, 1492, 1762, 2104, 2312, 2859
LweI	GCATC	8 cut(s)	53, 1394, 1978, 2084, 2206, 2642, 2859, 3157
MaeI	CTAG	7 cut(s)	287, 561, 1563, 1964, 2639, 2975, 3159
MaeII	ACGT	1 cut(s)	1304
MflI	RGATCY	3 cut(s)	706, 919, 2823
MhlI	GDGCHC	3 cut(s)	448, 776, 1102
MlsI	TGGCCA	1 cut(s)	102
MluNI	TGGCCA	1 cut(s)	102
MlyI	GAGTC	3 cut(s)	1421, 1754, 2517
MmeI	TCCRAC	8 cut(s)	433, 478, 881, 1266, 1668, 2591, 2851, 3046
Mox20I	TGGCCA	1 cut(s)	102
Mph1103I	ATGCAT	1 cut(s)	2771
MroXI	GAANNNNTTC	3 cut(s)	531, 2181, 2708
MscI	TGGCCA	1 cut(s)	102
MslI	CAYNNNNRTG	2 cut(s)	2748, 2764
Msp20I	TGGCCA	1 cut(s)	102
MspA1I	CMGCKG	1 cut(s)	160
MspI	CCGG	3 cut(s)	122, 2552, 2599
MspR9I	CCNGG	3 cut(s)	99, 123, 1068
MvaI	CCWGG	2 cut(s)	99, 1068
MwoI	GCNNNNNNNGC	4 cut(s)	1174, 1511, 2225, 2705
NciI	CCSGG	1 cut(s)	123
NdeI	CATATG	3 cut(s)	1351, 2660, 2840
NlaIV	GGNNCC	7 cut(s)	401, 708, 1022, 1100, 2597, 2752, 2825
NmuCI	GTSAC	5 cut(s)	223, 1688, 1746, 2965, 3252
NsbI	TGCGCA	1 cut(s)	1779
NsiI	ATGCAT	1 cut(s)	2771
NspI	RCATGY	3 cut(s)	1218, 1531, 2769
NspV	TTCGAA	3 cut(s)	800, 1957, 2906
OliI	CACNNNNGTG	1 cut(s)	2748
PaeR7I	CTCGAG	1 cut(s)	1537
PciSI	GCTCTTC	1 cut(s)	2997
PdmI	GAANNNNTTC	3 cut(s)	531, 2181, 2708
PfeI	GAWTC	9 cut(s)	89, 405, 797, 991, 1276, 1557, 2356, 3055, 3175
PflMI	CCANNNNNTGG	1 cut(s)	2958
PkrI	GCNGC	8 cut(s)	162, 292, 1384, 1507, 1777, 2119, 2327, 2849
Ple19I	CGATCG	1 cut(s)	1378
PleI	GAGTC	3 cut(s)	1420, 1753, 2516
PpsI	GAGTC	3 cut(s)	1420, 1753, 2516
PpuMI	RGGWCCY	1 cut(s)	2045
Psp5II	RGGWCCY	1 cut(s)	2045
Psp6I	CCWGG	2 cut(s)	97, 1066
PspGI	CCWGG	2 cut(s)	97, 1066
PspN4I	GGNNCC	7 cut(s)	401, 708, 1022, 1100, 2597, 2752, 2825
PspOMI	GGGCCC	1 cut(s)	1098
PspPI	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2045, 2281, 2569, 2942
PspPPI	RGGWCCY	1 cut(s)	2045
PspXI	VCTCGAGB	1 cut(s)	1537
PstI	CTGCAG	1 cut(s)	2330
PstNI	CAGNNNCTG	1 cut(s)	112
PsuI	RGATCY	3 cut(s)	706, 919, 2823
PvuI	CGATCG	1 cut(s)	1378
PvuII	CAGCTG	1 cut(s)	160
RsaI	GTAC	6 cut(s)	185, 215, 1022, 2064, 2372, 2864
RsaNI	GTAC	6 cut(s)	184, 214, 1021, 2063, 2371, 2863
RseI	CAYNNNNRTG	2 cut(s)	2748, 2764
SapI	GCTCTTC	1 cut(s)	2997
SatI	GCNGC	8 cut(s)	161, 291, 1383, 1506, 1776, 2118, 2326, 2848
Sau96I	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2045, 2281, 2569, 2942
ScaI	AGTACT	1 cut(s)	2064
SchI	GAGTC	3 cut(s)	1421, 1754, 2517
ScrFI	CCNGG	3 cut(s)	99, 123, 1068
SduI	GDGCHC	3 cut(s)	448, 776, 1102
SfaNI	GCATC	8 cut(s)	53, 1394, 1978, 2084, 2206, 2642, 2859, 3157
SfcI	CTRYAG	2 cut(s)	1146, 2326
Sfr274I	CTCGAG	1 cut(s)	1537
SfuI	TTCGAA	3 cut(s)	800, 1957, 2906
SinI	GGWCC	4 cut(s)	848, 1641, 2045, 2281
SlaI	CTCGAG	1 cut(s)	1537
SmiMI	CAYNNNNRTG	2 cut(s)	2748, 2764
SmlI	CTYRAG	4 cut(s)	1537, 1829, 2513, 2543
SmoI	CTYRAG	4 cut(s)	1537, 1829, 2513, 2543
SsiI	CCGC	2 cut(s)	1484, 1568
SspI	AATATT	3 cut(s)	530, 2019, 3246
SspMI	CTAG	7 cut(s)	287, 561, 1563, 1964, 2639, 2975, 3159
StyD4I	CCNGG	3 cut(s)	97, 121, 1066
StyI	CCWWGG	1 cut(s)	2223
TaaI	ACNGT	9 cut(s)	439, 755, 1550, 2295, 2400, 2782, 2885, 3027, 3213
TaiI	ACGT	1 cut(s)	1307
TatI	WGTACW	3 cut(s)	213, 2062, 2370
TfiI	GAWTC	9 cut(s)	89, 405, 797, 991, 1276, 1557, 2356, 3055, 3175
TscAI	CASTG	9 cut(s)	760, 789, 870, 993, 1485, 1501, 2403, 3135, 3261
TseFI	GTSAC	5 cut(s)	223, 1688, 1746, 2965, 3252
TseI	GCWGC	8 cut(s)	160, 290, 1382, 1505, 1775, 2117, 2325, 2847
Tsp45I	GTSAC	5 cut(s)	223, 1688, 1746, 2965, 3252
TspGWI	ACGGA	3 cut(s)	1298, 1807, 1833
TspRI	CASTG	9 cut(s)	760, 789, 870, 993, 1485, 1501, 2403, 3135, 3261
Van91I	CCANNNNNTGG	1 cut(s)	2958
VpaK11BI	GGWCC	4 cut(s)	848, 1641, 2045, 2281
XapI	RAATTY	5 cut(s)	427, 680, 739, 1319, 1436
XceI	RCATGY	3 cut(s)	1218, 1531, 2769
XcmI	CCANNNNNNNNNTGG	1 cut(s)	652
XhoI	CTCGAG	1 cut(s)	1537
XmnI	GAANNNNTTC	3 cut(s)	531, 2181, 2708
XspI	CTAG	7 cut(s)	287, 561, 1563, 1964, 2639, 2975, 3159
ZrmI	AGTACT	1 cut(s)	2064
Zsp2I	ATGCAT	1 cut(s)	2771

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.