Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016785

Physical Location & Seq

Genomic Coordinates Reverse (-)

13675491 .. 13680689

Gene Structure 5199 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29939

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3933 bp

ATGTCAGGGTCATCTGGAAGAAGAAAGAGGAAGATAAGATGGAGCAAGCTGTATTCCTATGGATGCTTCAGACCACCCCACACTCTTGATTCTGATCCTGGCCAACAGCTACTGGGTCAACCGGGGTTTTCCCGGGTGGTTTTCTGCAATGAACCTCAGCTGCACAAGGCTAAGCCTTACAAGTACCCCAAGAACTATGTATCCACAACCAAGTACAACATTGTCACTTTTCTTCCCAAAGCTCTTTTCGAGCAGTTTCGCAGAGTTGCCAATCTTTATTTCCTTCTAGCAGCAGTTTTGTCTCTCAATTCTTTCGCTCCCTTTAATCCAATAAGTTTGATTGCTCCTTTGGTGTTTGTTGTGGGAGTTAGCATGATTAAAGAGGCTGTCGAGGATTGGCACCGATTCTTGCAGGATTTGAATGTGAATTCAAGAACTGTTAGGGCTCATGTTGGAGGTGGCTTATTTGTTGAAAAGACATGGCAAGGACTTTGTGTTGGAGATGTTGTTAAAGTTAACAAGAATGAATATTTTCCAAGTGATCTTCTCTTGCTATCTTCTAGCTTTGAGGATGGCATATGTTATGTCGAGACCATGAACCTCGATGGAGAAACTAATCTGAAAGTTAAGAGAAGCTCAGAAGCCACACTTGACTTGGCAAATGATCAAGCTTTTAGTGAATTCAAGGCCACAATTCTCTGTGAGGATCCAAATCCTCATCTTTACACCTTTGTTGGGAATTTAGAGTTGAACTGTGTAACACATCCCTTGTGCCCTGCCACACTGCTTCTAAGAGATTCGAAACTTAGAAATACTGATTACATTTATGGGGTTGTGATCTTTAGTGGACCTGACACAAAAGCAGTGAGGAACTCAACAAGATCACCATCCAAGCGTAGTCGGATTGAAAGAAAGATGGATCTTGTCATTTACCTTCTCTTTTCAATGCTTCTTCTCATTTCACTCATCACTTCAACTGGTTTCGCGGTGATTCTGAAATCACAAATGGCCAAGTGGTGGTACCTTTCTCTGCAAGATGATGATCTACTCTTTAAACCATTAAAGCCTGGAGTATCTGGTTTCCTACAATTTGTAAGGGCCCTTATTTTGTATGGCTACTTGATCCCCATTTCTCTCTATGTCTCTATAGAGGTTGTCAAAGTTTTGCAAGCCATGCTCATTAACAAGGATATAGAGTTGTATGATGAAGTTACATGCAAGTCAGTTCAAACCAGAACATCCAACTTGAATGAAGAACTTGGTCAAGTAGAGATGATTCTGACGGATAAAACGGGGACTTTGACGTGTAATCAGATGGAATTTAGGAAATGCTCTATTGCTGGAGCTTCATATGGGGGTAACATTAATAATATCGATCGTGCAGCATCTAAAAGGATGAATGTTGAGGTTGAGTCGTATCGTTTTAGTATGGATGAATTTGAAACACAATGCCAAAGCTTTGAAATGTTTGACTTTTCAGTGGCGGATGTTAGCACTAAAAAAGCTGCTCTTGCTGGACAGAAGCACATGCAGAACTCGAGTGCAGACTGTTCCAGAATCTCTAGTGCGGAGGGAGAACCTGCCATCAAAGGTTTCAACTTTTGGGATGATAGGCTTATGAACAGAAAGTGGGTTTATAGGTCCAACTTATTTGATGTAACAATGTTCTTTAGAGTCATGGCTCTATGTCACACAGGCATACCTGTTGATGGTGATCAGGCTCATAAGCTAAAGTATGAGGCAGAGTCACCAGAAGAAGTATCTTTTCTAATTGCTGCACAAGAGTTTGGATTCCAATTTTTTCAAAGAAGTCAGTCCGTTATGTATCTCAAGGAGTTTGATCCGTCCTCTGGAAAGATGGTTGAGAGGAAGTACAAACTTTTAAACCTTCTAGAATTCTGTAGTGCTCGAAAGAGGATGTCAGTTATTGTAAGCAATGAAGATGATGAAATCTTTCTTCTCTGCAAAGGGGCAGATAAGTATGTTATCTTCATCAACAATGGTAGGTCTTACCAACAGGCTACAACTCTACACCTTTCAGATTATGCAGAAGATGGATTTCGAACTCTAGCATTTGCTTATCGAAAACTTGATGCTGTCGAGTATGAAAAATGGAACTCAATATTTACCGAGGCTAAGACCACAGTAGGTCCTGAAAGAGAAGAAGTACTAATAGAAGCATCTGAAATGATTGAAAAGGATTTAATTCTATTAGGGGTTGCTGCTATTGAAGACAAGTTACAAAAAGGGGTTCCAGAATGCATAGATAAACTTGCACAAGCAGGAATGAAAATATGGCTGCTCACTGGTGACAAGAAAGAAACTGCAATAAATATTGGATTTTCTTGCAGCTTACTTCGGGAGGATATGAAACAGTTTCATCTAATTTTGGGCAAAGAAAGTGCAGCTAGTAACCGACTGAAGGAGATGAAGGAAGACATTTTAAACCAACTTGAAGGCTTTCAGAAAGTGAAGTCTGAAGAAAGCAACAAAGATGCACCCTTGGCTTTGATAGTAGATGGAAAAGCTCTTGAAATTGCTCTGAGAAGTGATGTGAAGGACCAGTTCTTACCGTTGGCCGTTGATTGTGCTTCTGTTATATGCTGCAGGGTGTCTCCAAAACAAAAGGCTCTGATTACTCGATTGGTAAAGGAACATACAGGCAAGACAACCTTGGCTATTGGAGATGGGGCAAATGATGTTGGCATGATTCAAGAAGCTGATATTGGAGTAGGAATCAGTGGCATGGAAGGAATGCAGGTAAGCTTTGAACATGACCTTCGGATTGCTAGGCAACCAACCTATTCTCTGATCATCTTATTTTCTTTTAGCCTTGTTTCAAAGATGCTTATGCTTTTCAAGTACTCATTTCTGCTTAGACATTACAAACATTTACTTCTGAAAATTGCACAGGCAGTCATGGCCAGTGACATCTCATTGCCTCAATTCCGATTTTTGGGGAGATTACTTATTGTTCATGGGCACTGGTGTTACAAGAGGATTTCGAAAATGATTCTCTACTTTGTGTACAAAAACATTGCATTTGGCCTCACACTGTTCTACTATGAAGTATACACAAGTTTCTCAGGGGAGGTCTTATATGATGACTGGTATATGGCACTATTCAATGTAATTTTGACATCTTTGCCTGTTATATCATTGGGAGTCCTTGAGCAAGATGTTTCATCCGAAGTGTGCCTCAAGTTTCCGGCTCTCTACCAACAGGGCCAAAAGAACATATACTTCACTTGGAGCCGCATCATCGGTTGGATACTCAACGGCATTGTAGCATCTCTAGTCATCTTCCTTGCAAACATATGCACACTTTCTACCTTCAACAAAGATGGTAGTTTTGCAGAGAAAGCCTTCGCCAAAGATGGTAATGTTGCAGACATCACACACCTCGGTGCCATGACATACACATGCATAATATGGACAGTTAATTGCCAGATATCCCTCATCATCACCCACTTCACATGGATCCAACATCTCTTCATATGGGGCAGCATCATCATCTGGTACATCTTCCTGTTCATCTATGGTGCGCTACCTCCTGATATTTCGAAAAGAGGCTTTCGTGTTCTTTCAGAAGCTCTTGGCCCTGCACCCATTTACTGGCTTGTCACATTGCTAGTTGTGGTTGTTGCTCTTCTTCCTTATTTCATCCATATTGCGATCCAACGGTCGTTTTATCCTTTGGATGACCATGTGATTCAAGAAATGAAGTATTGCAGGAAAGATATTGGGAAAAATAATCTAATTTGGGAGAGGGAACAGAACAACTCAGTGATGATGACCCAGATAGGATTTTCGGCTAGAGTTGATGCAAGGATTCGGATTATGAAGGAAAACTTGAACCAGAAGGGACAGTTGATATATAGATCAGTAACAAGCAGTCCAATATTTAGGTCACTGACAAGCAGTCCAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase Hydrolase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1310

Amino Acids

148.81

Weight (kDa)

8.24

Isoelectric Point (pI)

38.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	47 - 113	1.7e-22	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	555 - 749	2.2e-15	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	973 - 1232	3.3e-85	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016785)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g11830
malus_domestica	MD10G1238400.v1.1
prunus_persica	Prupe.4G105900_v2.0.a1
pyrus_communis	pycom10g19940
rosa_chinensis	RchiOBHm_Chr5g0019261
rosa_laevigata	RLG00000032432
rosa_multiflora	Rmu_co8517133.1_g000001
rosa_roxburghii	Rroxscaffold_1G00058740
rosa_rugosa	Rorug05G0049000
rosa_samantha	Rh5AG140100 Rh5BG139100 Rh5CG150500 Rh5DG139700
rosa_wichuraiana	Rw5G012460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1588, 2749
Acc65I	GGTACC	1 cut(s)	1020
AccB1I	GGYRCC	3 cut(s)	399, 1020, 3407
AccB7I	CCANNNNNTGG	2 cut(s)	1017, 3615
AccI	GTMKAC	1 cut(s)	3072
AccII	CGCG	1 cut(s)	986
AciI	CCGC	4 cut(s)	986, 1484, 1568, 3256
AclWI	GGATC	9 cut(s)	89, 701, 714, 927, 1117, 1835, 3475, 3488, 3670
AcoI	YGGCCR	4 cut(s)	100, 1008, 2577, 2922
AcsI	RAATTY	6 cut(s)	427, 680, 739, 1319, 1436, 1895
AcuI	CTGAAG	3 cut(s)	52, 2441, 2499
AfaI	GTAC	8 cut(s)	185, 215, 1022, 1874, 2169, 2864, 3029, 3521
AfiI	CCNNNNNNNGG	7 cut(s)	735, 1017, 1709, 1850, 2422, 2956, 3615
AflIII	ACRYGT	1 cut(s)	1304
AhdI	GACNNNNNGTC	1 cut(s)	3921
AjiI	CACGTC	1 cut(s)	1305
AjnI	CCWGG	2 cut(s)	97, 1066
AjuI	GAANNNNNNNTTGG	6 cut(s)	230, 262, 263, 295, 2709, 2741
AleI	CACNNNNGTG	1 cut(s)	3405
AloI	GAACNNNNNNTCC	2 cut(s)	185, 217
Alw21I	GWGCWC	1 cut(s)	1909
Alw26I	GTCTC	4 cut(s)	306, 584, 1147, 2619
AlwI	GGATC	9 cut(s)	89, 701, 714, 927, 1117, 1835, 3475, 3488, 3670
AlwNI	CAGNNNCTG	1 cut(s)	112
Ama87I	CYCGRG	2 cut(s)	132, 1537
AoxI	GGCC	9 cut(s)	100, 687, 1008, 1098, 2577, 2922, 3046, 3226, 3598
ApaI	GGGCCC	1 cut(s)	1102
ApoI	RAATTY	6 cut(s)	427, 680, 739, 1319, 1436, 1895
AseI	ATTAAT	1 cut(s)	1365
Asp700I	GAANNNNTTC	4 cut(s)	531, 1953, 2460, 3365
Asp718I	GGTACC	1 cut(s)	1020
AspLEI	GCGC	1 cut(s)	3547
AspS9I	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2150, 2560, 3226, 3599
AsuC2I	CCSGG	3 cut(s)	123, 133, 134
AsuHPI	GGTGA	6 cut(s)	876, 1000, 1724, 1740, 2321, 3457
AsuII	TTCGAA	4 cut(s)	800, 2062, 3005, 3563
AvaI	CYCGRG	2 cut(s)	132, 1537
AvaII	GGWCC	4 cut(s)	848, 1641, 2150, 2560
BaeGI	GKGCMC	3 cut(s)	776, 1102, 2985
BalI	TGGCCA	3 cut(s)	102, 1010, 2924
BamHI	GGATCC	2 cut(s)	706, 3480
BanI	GGYRCC	3 cut(s)	399, 1020, 3407
BanII	GRGCYC	2 cut(s)	448, 1102
BarI	GAAGNNNNNNTAC	4 cut(s)	1973, 2005, 2223, 2255
BbsI	GAAGAC	2 cut(s)	2238, 2442
Bbv12I	GWGCWC	1 cut(s)	1909
BbvCI	CCTCAGC	1 cut(s)	156
BceAI	ACGGC	2 cut(s)	2564, 3295
BciT130I	CCWGG	2 cut(s)	99, 1068
BciVI	GTATCC	2 cut(s)	211, 3264
BclI	TGATCA	3 cut(s)	664, 1714, 2811
BcnI	CCSGG	3 cut(s)	123, 133, 134
BcoDI	GTCTC	4 cut(s)	306, 584, 1147, 2619
BfmI	CTRYAG	3 cut(s)	1146, 1900, 2605
BfuAI	ACCTGC	2 cut(s)	1588, 2749
BfuI	GTATCC	2 cut(s)	211, 3264
BlpI	GCTNAGC	1 cut(s)	171
BmcAI	AGTACT	2 cut(s)	2169, 2864
Bme1390I	CCNGG	5 cut(s)	99, 123, 133, 134, 1068
Bme18I	GGWCC	4 cut(s)	848, 1641, 2150, 2560
BmeRI	GACNNNNNGTC	1 cut(s)	3921
BmeT110I	CYCGRG	2 cut(s)	132, 1537
BmgBI	CACGTC	1 cut(s)	1305
BmgT120I	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2150, 2560, 3226, 3599
BmiI	GGNNCC	8 cut(s)	401, 708, 1022, 1100, 2253, 3254, 3409, 3482
BmrFI	CCNGG	5 cut(s)	99, 123, 133, 134, 1068
BmrI	ACTGGG	1 cut(s)	122
BmuI	ACTGGG	1 cut(s)	122
BpiI	GAAGAC	2 cut(s)	2238, 2442
BpmI	CTGGAG	2 cut(s)	1089, 1362
Bpu10I	CCTNAGC	1 cut(s)	156
Bpu1102I	GCTNAGC	1 cut(s)	171
Bpu14I	TTCGAA	4 cut(s)	800, 2062, 3005, 3563
BpuEI	CTTGAG	3 cut(s)	1814, 3185, 3191
BpuMI	CCSGG	3 cut(s)	123, 133, 134
Bsa29I	ATCGAT	1 cut(s)	1374
BsaBI	GATNNNNATC	5 cut(s)	93, 711, 886, 1041, 1713
BsaI	GGTCTC	1 cut(s)	584
BsaJI	CCNNGG	6 cut(s)	122, 132, 2130, 2502, 2673, 3403
BsaXI	ACNNNNNCTCC	2 cut(s)	492, 522
Bsc4I	CCNNNNNNNGG	7 cut(s)	735, 1017, 1709, 1850, 2422, 2956, 3615
Bse1I	ACTGG	8 cut(s)	117, 982, 2311, 2563, 2925, 2990, 3113, 3620
Bse3DI	GCAATG	5 cut(s)	154, 1942, 2936, 3036, 3626
Bse8I	GATNNNNATC	5 cut(s)	93, 711, 886, 1041, 1713
BseBI	CCWGG	2 cut(s)	99, 1068
BseCI	ATCGAT	1 cut(s)	1374
BseDI	CCNNGG	6 cut(s)	122, 132, 2130, 2502, 2673, 3403
BseJI	GATNNNNATC	5 cut(s)	93, 711, 886, 1041, 1713
BseLI	CCNNNNNNNGG	7 cut(s)	735, 1017, 1709, 1850, 2422, 2956, 3615
BseMI	GCAATG	5 cut(s)	154, 1942, 2936, 3036, 3626
BseMII	CTCAG	5 cut(s)	170, 651, 2534, 3099, 3798
BseNI	ACTGG	8 cut(s)	117, 982, 2311, 2563, 2925, 2990, 3113, 3620
BseSI	GKGCMC	3 cut(s)	776, 1102, 2985
BsgI	GTGCAG	6 cut(s)	146, 1401, 1563, 1761, 2424, 3588
Bsh1236I	CGCG	1 cut(s)	986
Bsh1285I	CGRYCG	2 cut(s)	1378, 3686
BshFI	GGCC	9 cut(s)	102, 689, 1010, 1100, 2579, 2924, 3048, 3228, 3600
BshNI	GGYRCC	3 cut(s)	399, 1020, 3407
BshVI	ATCGAT	1 cut(s)	1374
BsiEI	CGRYCG	2 cut(s)	1378, 3686
BsiHKAI	GWGCWC	1 cut(s)	1909
BsiHKCI	CYCGRG	2 cut(s)	132, 1537
BsiSI	CCGG	3 cut(s)	122, 133, 3209
BslFI	GGGAC	2 cut(s)	1309, 3879
BslI	CCNNNNNNNGG	7 cut(s)	735, 1017, 1709, 1850, 2422, 2956, 3615
BsmAI	GTCTC	4 cut(s)	306, 584, 1147, 2619
BsmFI	GGGAC	2 cut(s)	1309, 3879
BsmI	GAATGC	2 cut(s)	2264, 2760
BsnI	GGCC	9 cut(s)	102, 689, 1010, 1100, 2579, 2924, 3048, 3228, 3600
Bso31I	GGTCTC	1 cut(s)	584
BsoBI	CYCGRG	2 cut(s)	132, 1537
Bsp119I	TTCGAA	4 cut(s)	800, 2062, 3005, 3563
Bsp120I	GGGCCC	1 cut(s)	1098
Bsp1286I	GDGCHC	5 cut(s)	448, 776, 1102, 1909, 2985
Bsp1407I	TGTACA	1 cut(s)	3027
Bsp1720I	GCTNAGC	1 cut(s)	171
BspACI	CCGC	4 cut(s)	986, 1484, 1568, 3256
BspANI	GGCC	9 cut(s)	102, 689, 1010, 1100, 2579, 2924, 3048, 3228, 3600
BspCNI	CTCAG	5 cut(s)	169, 650, 2535, 3098, 3797
BspDI	ATCGAT	1 cut(s)	1374
BspFNI	CGCG	1 cut(s)	986
BspLI	GGNNCC	8 cut(s)	401, 708, 1022, 1100, 2253, 3254, 3409, 3482
BspMAI	CTGCAG	1 cut(s)	2609
BspMI	ACCTGC	2 cut(s)	1588, 2749
BspPI	GGATC	9 cut(s)	89, 701, 714, 927, 1117, 1835, 3475, 3488, 3670
BspQI	GCTCTTC	1 cut(s)	3654
BspT104I	TTCGAA	4 cut(s)	800, 2062, 3005, 3563
BspT107I	GGYRCC	3 cut(s)	399, 1020, 3407
BspTNI	GGTCTC	1 cut(s)	584
BsrDI	GCAATG	5 cut(s)	154, 1942, 2936, 3036, 3626
BsrGI	TGTACA	1 cut(s)	3027
BsrI	ACTGG	8 cut(s)	117, 982, 2311, 2563, 2925, 2990, 3113, 3620
BssECI	CCNNGG	6 cut(s)	122, 132, 2130, 2502, 2673, 3403
BssNAI	GTATAC	1 cut(s)	3073
BssT1I	CCWWGG	2 cut(s)	2502, 2673
Bst1107I	GTATAC	1 cut(s)	3073
Bst2UI	CCWGG	2 cut(s)	99, 1068
Bst6I	CTCTTC	2 cut(s)	3497, 3654
BstAPI	GCANNNNNTGC	1 cut(s)	1174
BstAUI	TGTACA	1 cut(s)	3027
BstBI	TTCGAA	4 cut(s)	800, 2062, 3005, 3563
BstC8I	GCNNGC	2 cut(s)	47, 1170
BstFNI	CGCG	1 cut(s)	986
BstHHI	GCGC	1 cut(s)	3547
BstMAI	GTCTC	4 cut(s)	306, 584, 1147, 2619
BstMCI	CGRYCG	2 cut(s)	1378, 3686
BstMWI	GCNNNNNNNGC	5 cut(s)	1174, 1511, 2504, 2921, 3362
BstNI	CCWGG	2 cut(s)	99, 1068
BstNSI	RCATGY	3 cut(s)	1218, 1531, 3426
BstSCI	CCNGG	5 cut(s)	97, 121, 131, 132, 1066
BstSFI	CTRYAG	3 cut(s)	1146, 1900, 2605
BstSLI	GKGCMC	3 cut(s)	776, 1102, 2985
BstUI	CGCG	1 cut(s)	986
BstV2I	GAAGAC	2 cut(s)	2238, 2442
BstX2I	RGATCY	3 cut(s)	706, 919, 3480
BstYI	RGATCY	3 cut(s)	706, 919, 3480
BstZ17I	GTATAC	1 cut(s)	3073
Bsu15I	ATCGAT	1 cut(s)	1374
BsuI	GTATCC	2 cut(s)	211, 3264
BsuRI	GGCC	9 cut(s)	102, 689, 1010, 1100, 2579, 2924, 3048, 3228, 3600
BsuTUI	ATCGAT	1 cut(s)	1374
BtrI	CACGTC	1 cut(s)	1305
BtsI	GCAGTG	2 cut(s)	782, 870
BveI	ACCTGC	2 cut(s)	1588, 2749
Cac8I	GCNNGC	2 cut(s)	47, 1170
CaiI	CAGNNNCTG	1 cut(s)	112
CfoI	GCGC	1 cut(s)	3547
Cfr13I	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2150, 2560, 3226, 3599
Cfr9I	CCCGGG	1 cut(s)	132
ClaI	ATCGAT	1 cut(s)	1374
Csp6I	GTAC	8 cut(s)	184, 214, 1021, 1873, 2168, 2863, 3028, 3520
CviQI	GTAC	8 cut(s)	184, 214, 1021, 1873, 2168, 2863, 3028, 3520
DraI	TTTAAA	3 cut(s)	1054, 1884, 2445
DriI	GACNNNNNGTC	1 cut(s)	3921
EaeI	YGGCCR	4 cut(s)	100, 1008, 2577, 2922
Eam1104I	CTCTTC	2 cut(s)	3497, 3654
Eam1105I	GACNNNNNGTC	1 cut(s)	3921
EarI	CTCTTC	2 cut(s)	3497, 3654
EciI	GGCGGA	1 cut(s)	1499
Eco130I	CCWWGG	2 cut(s)	2502, 2673
Eco24I	GRGCYC	2 cut(s)	448, 1102
Eco31I	GGTCTC	1 cut(s)	584
Eco32I	GATATC	1 cut(s)	3453
Eco47I	GGWCC	4 cut(s)	848, 1641, 2150, 2560
Eco57I	CTGAAG	3 cut(s)	52, 2441, 2499
Eco88I	CYCGRG	2 cut(s)	132, 1537
EcoO109I	RGGNCCY	3 cut(s)	1098, 1099, 2150
EcoRI	GAATTC	3 cut(s)	427, 680, 1895
EcoRII	CCWGG	2 cut(s)	97, 1066
EcoRV	GATATC	1 cut(s)	3453
EcoT14I	CCWWGG	2 cut(s)	2502, 2673
EcoT22I	ATGCAT	2 cut(s)	2264, 3428
EcoT38I	GRGCYC	2 cut(s)	448, 1102
ErhI	CCWWGG	2 cut(s)	2502, 2673
FalI	AAGNNNNNCTT	8 cut(s)	633, 665, 1494, 1526, 2657, 2689, 3836, 3868
FaqI	GGGAC	2 cut(s)	1309, 3879
FauNDI	CATATG	4 cut(s)	578, 1351, 3317, 3497
FbaI	TGATCA	3 cut(s)	664, 1714, 2811
FblI	GTMKAC	1 cut(s)	3072
FriOI	GRGCYC	2 cut(s)	448, 1102
GlaI	GCGC	1 cut(s)	3546
GsuI	CTGGAG	2 cut(s)	1089, 1362
HaeIII	GGCC	9 cut(s)	102, 689, 1010, 1100, 2579, 2924, 3048, 3228, 3600
HapII	CCGG	3 cut(s)	122, 133, 3209
HhaI	GCGC	1 cut(s)	3547
Hin6I	GCGC	1 cut(s)	3545
HinP1I	GCGC	1 cut(s)	3545
HincII	GTYRAC	2 cut(s)	119, 517
HindII	GTYRAC	2 cut(s)	119, 517
HindIII	AAGCTT	3 cut(s)	669, 1456, 2764
HpaI	GTTAAC	1 cut(s)	517
HpaII	CCGG	3 cut(s)	122, 133, 3209
HphI	GGTGA	6 cut(s)	876, 1000, 1724, 1740, 2321, 3457
Hpy166II	GTNNAC	5 cut(s)	119, 517, 848, 3028, 3073
Hpy8I	GTNNAC	5 cut(s)	119, 517, 848, 3028, 3073
HpyCH4IV	ACGT	1 cut(s)	1304
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1174, 1511, 2504, 2921, 3362
HpySE526I	ACGT	1 cut(s)	1304
HspAI	GCGC	1 cut(s)	3545
KpnI	GGTACC	1 cut(s)	1024
Ksp22I	TGATCA	3 cut(s)	664, 1714, 2811
KspAI	GTTAAC	1 cut(s)	517
LguI	GCTCTTC	1 cut(s)	3654
LmnI	GCTCC	5 cut(s)	42, 322, 349, 1343, 3252
MaeII	ACGT	1 cut(s)	1304
MflI	RGATCY	3 cut(s)	706, 919, 3480
MhlI	GDGCHC	5 cut(s)	448, 776, 1102, 1909, 2985
MlsI	TGGCCA	3 cut(s)	102, 1010, 2924
MluNI	TGGCCA	3 cut(s)	102, 1010, 2924
MlyI	GAGTC	4 cut(s)	1421, 1683, 1754, 3174
MmeI	TCCRAC	8 cut(s)	433, 478, 881, 1266, 1668, 3248, 3508, 3703
Mox20I	TGGCCA	3 cut(s)	102, 1010, 2924
Mph1103I	ATGCAT	2 cut(s)	2264, 3428
MroXI	GAANNNNTTC	4 cut(s)	531, 1953, 2460, 3365
MscI	TGGCCA	3 cut(s)	102, 1010, 2924
MslI	CAYNNNNRTG	2 cut(s)	3405, 3421
Msp20I	TGGCCA	3 cut(s)	102, 1010, 2924
MspA1I	CMGCKG	1 cut(s)	160
MspI	CCGG	3 cut(s)	122, 133, 3209
MspR9I	CCNGG	5 cut(s)	99, 123, 133, 134, 1068
Mva1269I	GAATGC	2 cut(s)	2264, 2760
MvaI	CCWGG	2 cut(s)	99, 1068
MvnI	CGCG	1 cut(s)	986
MwoI	GCNNNNNNNGC	5 cut(s)	1174, 1511, 2504, 2921, 3362
NciI	CCSGG	3 cut(s)	123, 133, 134
NdeI	CATATG	4 cut(s)	578, 1351, 3317, 3497
NlaIV	GGNNCC	8 cut(s)	401, 708, 1022, 1100, 2253, 3254, 3409, 3482
NmuCI	GTSAC	7 cut(s)	223, 1688, 1746, 2309, 2927, 3622, 3909
NsiI	ATGCAT	2 cut(s)	2264, 3428
NspI	RCATGY	3 cut(s)	1218, 1531, 3426
NspV	TTCGAA	4 cut(s)	800, 2062, 3005, 3563
OliI	CACNNNNGTG	1 cut(s)	3405
PaeR7I	CTCGAG	1 cut(s)	1537
PciSI	GCTCTTC	1 cut(s)	3654
PctI	GAATGC	2 cut(s)	2264, 2760
PdmI	GAANNNNTTC	4 cut(s)	531, 1953, 2460, 3365
PflMI	CCANNNNNTGG	2 cut(s)	1017, 3615
Ple19I	CGATCG	1 cut(s)	1378
PleI	GAGTC	4 cut(s)	1420, 1682, 1753, 3173
PpsI	GAGTC	4 cut(s)	1420, 1682, 1753, 3173
PpuMI	RGGWCCY	1 cut(s)	2150
PshBI	ATTAAT	1 cut(s)	1365
Psp5II	RGGWCCY	1 cut(s)	2150
Psp6I	CCWGG	2 cut(s)	97, 1066
PspGI	CCWGG	2 cut(s)	97, 1066
PspN4I	GGNNCC	8 cut(s)	401, 708, 1022, 1100, 2253, 3254, 3409, 3482
PspOMI	GGGCCC	1 cut(s)	1098
PspPI	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2150, 2560, 3226, 3599
PspPPI	RGGWCCY	1 cut(s)	2150
PspXI	VCTCGAGB	1 cut(s)	1537
PstI	CTGCAG	1 cut(s)	2609
PstNI	CAGNNNCTG	1 cut(s)	112
PsuI	RGATCY	3 cut(s)	706, 919, 3480
PvuI	CGATCG	1 cut(s)	1378
PvuII	CAGCTG	1 cut(s)	160
RsaI	GTAC	8 cut(s)	185, 215, 1022, 1874, 2169, 2864, 3029, 3521
RsaNI	GTAC	8 cut(s)	184, 214, 1021, 1873, 2168, 2863, 3028, 3520
RseI	CAYNNNNRTG	2 cut(s)	3405, 3421
SapI	GCTCTTC	1 cut(s)	3654
Sau96I	GGNCC	8 cut(s)	848, 1098, 1099, 1641, 2150, 2560, 3226, 3599
ScaI	AGTACT	2 cut(s)	2169, 2864
SchI	GAGTC	4 cut(s)	1421, 1683, 1754, 3174
ScrFI	CCNGG	5 cut(s)	99, 123, 133, 134, 1068
SduI	GDGCHC	5 cut(s)	448, 776, 1102, 1909, 2985
SfcI	CTRYAG	3 cut(s)	1146, 1900, 2605
Sfr274I	CTCGAG	1 cut(s)	1537
SfuI	TTCGAA	4 cut(s)	800, 2062, 3005, 3563
SinI	GGWCC	4 cut(s)	848, 1641, 2150, 2560
SlaI	CTCGAG	1 cut(s)	1537
SmaI	CCCGGG	1 cut(s)	134
SmiMI	CAYNNNNRTG	2 cut(s)	3405, 3421
SmlI	CTYRAG	4 cut(s)	1537, 1829, 3170, 3200
SmoI	CTYRAG	4 cut(s)	1537, 1829, 3170, 3200
SsiI	CCGC	4 cut(s)	986, 1484, 1568, 3256
SspI	AATATT	4 cut(s)	530, 2124, 2335, 3903
StyD4I	CCNGG	5 cut(s)	97, 121, 131, 132, 1066
StyI	CCWWGG	2 cut(s)	2502, 2673
TaiI	ACGT	1 cut(s)	1307
TatI	WGTACW	5 cut(s)	213, 1872, 2167, 2862, 3027
TauI	GCSGC	1 cut(s)	3258
TseFI	GTSAC	7 cut(s)	223, 1688, 1746, 2309, 2927, 3622, 3909
Tsp45I	GTSAC	7 cut(s)	223, 1688, 1746, 2309, 2927, 3622, 3909
TspGWI	ACGGA	3 cut(s)	1298, 1807, 1833
TspMI	CCCGGG	1 cut(s)	132
Van91I	CCANNNNNTGG	2 cut(s)	1017, 3615
VpaK11BI	GGWCC	4 cut(s)	848, 1641, 2150, 2560
VspI	ATTAAT	1 cut(s)	1365
XapI	RAATTY	6 cut(s)	427, 680, 739, 1319, 1436, 1895
XbaI	TCTAGA	1 cut(s)	1891
XceI	RCATGY	3 cut(s)	1218, 1531, 3426
XcmI	CCANNNNNNNNNTGG	1 cut(s)	652
XhoI	CTCGAG	1 cut(s)	1537
XmaI	CCCGGG	1 cut(s)	132
XmiI	GTMKAC	1 cut(s)	3072
XmnI	GAANNNNTTC	4 cut(s)	531, 1953, 2460, 3365
ZrmI	AGTACT	2 cut(s)	2169, 2864
Zsp2I	ATGCAT	2 cut(s)	2264, 3428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.