Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g11830 |
| malus_domestica | MD10G1238400.v1.1 |
| prunus_persica | Prupe.4G105900_v2.0.a1 |
| pyrus_communis | pycom10g19940 |
| rosa_chinensis | RchiOBHm_Chr5g0019261 |
| rosa_laevigata | RLG00000032432 |
| rosa_multiflora | Rmu_co8517133.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00058740 |
| rosa_rugosa | Rorug05G0049000 |
| rosa_samantha | Rh5AG140100 Rh5BG139100 Rh5CG150500 Rh5DG139700 |
| rosa_wichuraiana | Rw5G012460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3254 |
| AatII | GACGTC | 1 cut(s) | 2993 |
| Acc36I | ACCTGC | 1 cut(s) | 3254 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2806 |
| AccBSI | CCGCTC | 1 cut(s) | 1864 |
| AccII | CGCG | 2 cut(s) | 130, 985 |
| AciI | CCGC | 5 cut(s) | 130, 694, 985, 1452, 1864 |
| AcoI | YGGCCR | 3 cut(s) | 2136, 2679, 2772 |
| AcuI | CTGAAG | 4 cut(s) | 823, 1013, 2444, 2502 |
| AcyI | GRCGYC | 1 cut(s) | 2990 |
| AdeI | CACNNNGTG | 1 cut(s) | 2473 |
| AfaI | GTAC | 6 cut(s) | 212, 1423, 1871, 2870, 2879, 3437 |
| AfeI | AGCGCT | 2 cut(s) | 685, 1903 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 700, 732, 1847, 2071, 2286, 2425, 2806 |
| AflIII | ACRYGT | 1 cut(s) | 1208 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3714 |
| AjnI | CCWGG | 1 cut(s) | 118 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 630, 662, 2712, 2744 |
| AleI | CACNNNNGTG | 2 cut(s) | 728, 3228 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 182, 214, 3387, 3419 |
| Alw21I | GWGCWC | 1 cut(s) | 3370 |
| Alw26I | GTCTC | 3 cut(s) | 581, 1141, 2620 |
| Alw44I | GTGCAC | 1 cut(s) | 3366 |
| Aor51HI | AGCGCT | 2 cut(s) | 685, 1903 |
| AoxI | GGCC | 8 cut(s) | 71, 1092, 2073, 2136, 2679, 2772, 2967, 3421 |
| ApaI | GGGCCC | 1 cut(s) | 1096 |
| ApaLI | GTGCAC | 1 cut(s) | 3366 |
| ApeKI | GCWGC | 9 cut(s) | 103, 287, 1376, 1772, 2225, 2302, 2352, 2607, 3741 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 528, 2463, 3551 |
| AspLEI | GCGC | 4 cut(s) | 686, 985, 1904, 3108 |
| AsuC2I | CCSGG | 3 cut(s) | 1228, 1373, 2612 |
| AsuHPI | GGTGA | 5 cut(s) | 873, 1364, 1466, 1737, 2324 |
| AvaII | GGWCC | 6 cut(s) | 703, 845, 1635, 2153, 2563, 3258 |
| BaeGI | GKGCMC | 3 cut(s) | 773, 1096, 3370 |
| BalI | TGGCCA | 3 cut(s) | 2138, 2681, 2774 |
| BamHI | GGATCC | 1 cut(s) | 3303 |
| BanII | GRGCYC | 2 cut(s) | 1096, 2901 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2226, 2258 |
| BbsI | GAAGAC | 1 cut(s) | 2241 |
| Bbv12I | GWGCWC | 1 cut(s) | 3370 |
| BbvI | GCAGC | 8 cut(s) | 115, 299, 1388, 1759, 2212, 2289, 2364, 2594 |
| BciT130I | CCWGG | 1 cut(s) | 120 |
| BciVI | GTATCC | 1 cut(s) | 192 |
| BclI | TGATCA | 4 cut(s) | 654, 661, 1711, 3526 |
| BcnI | CCSGG | 3 cut(s) | 1228, 1373, 2612 |
| BcoDI | GTCTC | 3 cut(s) | 581, 1141, 2620 |
| BfaI | CTAG | 6 cut(s) | 96, 2174, 2216, 3146, 3636, 3751 |
| BfmI | CTRYAG | 2 cut(s) | 492, 1897 |
| BfoI | RGCGCY | 2 cut(s) | 687, 1905 |
| BfuAI | ACCTGC | 1 cut(s) | 3254 |
| BfuI | GTATCC | 1 cut(s) | 192 |
| BisI | GCNGC | 9 cut(s) | 104, 288, 1377, 1773, 2226, 2303, 2353, 2608, 3742 |
| BlpI | GCTNAGC | 1 cut(s) | 84 |
| BlsI | GCNGC | 9 cut(s) | 105, 289, 1378, 1774, 2227, 2304, 2354, 2609, 3743 |
| BmcAI | AGTACT | 1 cut(s) | 1423 |
| Bme1390I | CCNGG | 4 cut(s) | 120, 1228, 1373, 2612 |
| Bme18I | GGWCC | 6 cut(s) | 703, 845, 1635, 2153, 2563, 3258 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3714 |
| BmiI | GGNNCC | 5 cut(s) | 315, 705, 1094, 2256, 3305 |
| BmrFI | CCNGG | 4 cut(s) | 120, 1228, 1373, 2612 |
| BmrI | ACTGGG | 1 cut(s) | 528 |
| BmsI | GCATC | 7 cut(s) | 620, 980, 1388, 2192, 2488, 3339, 3634 |
| BmuI | ACTGGG | 1 cut(s) | 528 |
| BpiI | GAAGAC | 1 cut(s) | 2241 |
| BpmI | CTGGAG | 1 cut(s) | 3035 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 84 |
| BpuEI | CTTGAG | 4 cut(s) | 88, 412, 2114, 3041 |
| BpuMI | CCSGG | 3 cut(s) | 1228, 1373, 2612 |
| BsaAI | YACGTR | 1 cut(s) | 1211 |
| BsaBI | GATNNNNATC | 1 cut(s) | 883 |
| BsaHI | GRCGYC | 1 cut(s) | 2990 |
| BsaI | GGTCTC | 1 cut(s) | 2620 |
| BsaJI | CCNNGG | 3 cut(s) | 2505, 2676, 3226 |
| BsaWI | WCCGGW | 2 cut(s) | 974, 2085 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 489, 519, 3161, 3191 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 700, 732, 1847, 2071, 2286, 2425, 2806 |
| Bse3DI | GCAATG | 3 cut(s) | 151, 2786, 3240 |
| Bse8I | GATNNNNATC | 1 cut(s) | 883 |
| BseBI | CCWGG | 1 cut(s) | 120 |
| BseDI | CCNNGG | 3 cut(s) | 2505, 2676, 3226 |
| BseGI | GGATG | 8 cut(s) | 574, 971, 1272, 1606, 1714, 1920, 3486, 3498 |
| BseJI | GATNNNNATC | 1 cut(s) | 883 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 700, 732, 1847, 2071, 2286, 2425, 2806 |
| BseMI | GCAATG | 3 cut(s) | 151, 2786, 3240 |
| BseMII | CTCAG | 7 cut(s) | 75, 648, 990, 1485, 2094, 2537, 3632 |
| BseRI | GAGGAG | 2 cut(s) | 533, 1718 |
| BseSI | GKGCMC | 3 cut(s) | 773, 1096, 3370 |
| BseXI | GCAGC | 8 cut(s) | 115, 299, 1388, 1759, 2212, 2289, 2364, 2594 |
| BseYI | CCCAGC | 1 cut(s) | 3745 |
| BsgI | GTGCAG | 4 cut(s) | 1557, 1758, 1989, 3411 |
| Bsh1236I | CGCG | 2 cut(s) | 130, 985 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1372, 3509 |
| BshFI | GGCC | 8 cut(s) | 73, 1094, 2075, 2138, 2681, 2774, 2969, 3423 |
| BsiEI | CGRYCG | 2 cut(s) | 1372, 3509 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3370 |
| BsiSI | CCGG | 5 cut(s) | 975, 1228, 1372, 2086, 2611 |
| BslFI | GGGAC | 1 cut(s) | 1493 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 700, 732, 1847, 2071, 2286, 2425, 2806 |
| BsmAI | GTCTC | 3 cut(s) | 581, 1141, 2620 |
| BsmFI | GGGAC | 1 cut(s) | 1493 |
| BsmI | GAATGC | 3 cut(s) | 2267, 2763, 3108 |
| BsnI | GGCC | 8 cut(s) | 73, 1094, 2075, 2138, 2681, 2774, 2969, 3423 |
| Bso31I | GGTCTC | 1 cut(s) | 2620 |
| Bsp120I | GGGCCC | 1 cut(s) | 1092 |
| Bsp1286I | GDGCHC | 4 cut(s) | 773, 1096, 2901, 3370 |
| Bsp1407I | TGTACA | 1 cut(s) | 2877 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 84 |
| BspACI | CCGC | 5 cut(s) | 130, 694, 985, 1452, 1864 |
| BspANI | GGCC | 8 cut(s) | 73, 1094, 2075, 2138, 2681, 2774, 2969, 3423 |
| BspCNI | CTCAG | 7 cut(s) | 76, 647, 991, 1484, 2095, 2538, 3631 |
| BspFNI | CGCG | 2 cut(s) | 130, 985 |
| BspLI | GGNNCC | 5 cut(s) | 315, 705, 1094, 2256, 3305 |
| BspMI | ACCTGC | 1 cut(s) | 3254 |
| BspTNI | GGTCTC | 1 cut(s) | 2620 |
| BsrBI | CCGCTC | 1 cut(s) | 1864 |
| BsrDI | GCAATG | 3 cut(s) | 151, 2786, 3240 |
| BsrGI | TGTACA | 1 cut(s) | 2877 |
| BssECI | CCNNGG | 3 cut(s) | 2505, 2676, 3226 |
| BssNI | GRCGYC | 1 cut(s) | 2990 |
| BssT1I | CCWWGG | 3 cut(s) | 2505, 2676, 3226 |
| Bst2UI | CCWGG | 1 cut(s) | 120 |
| Bst4CI | ACNGT | 9 cut(s) | 51, 436, 691, 2577, 3262, 3365, 3445, 3507, 3690 |
| Bst6I | CTCTTC | 3 cut(s) | 1904, 1932, 3477 |
| BstACI | GRCGYC | 1 cut(s) | 2990 |
| BstAUI | TGTACA | 1 cut(s) | 2877 |
| BstBAI | YACGTR | 1 cut(s) | 1211 |
| BstC8I | GCNNGC | 6 cut(s) | 64, 101, 1444, 1995, 2350, 2763 |
| BstF5I | GGATG | 8 cut(s) | 574, 971, 1272, 1606, 1714, 1920, 3486, 3498 |
| BstFNI | CGCG | 2 cut(s) | 130, 985 |
| BstH2I | RGCGCY | 2 cut(s) | 687, 1905 |
| BstHHI | GCGC | 4 cut(s) | 686, 985, 1904, 3108 |
| BstMAI | GTCTC | 3 cut(s) | 581, 1141, 2620 |
| BstMCI | CGRYCG | 2 cut(s) | 1372, 3509 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 2507, 2771 |
| BstNI | CCWGG | 1 cut(s) | 120 |
| BstNSI | RCATGY | 2 cut(s) | 66, 1302 |
| BstSCI | CCNGG | 4 cut(s) | 118, 1226, 1371, 2610 |
| BstSFI | CTRYAG | 2 cut(s) | 492, 1897 |
| BstSLI | GKGCMC | 3 cut(s) | 773, 1096, 3370 |
| BstUI | CGCG | 2 cut(s) | 130, 985 |
| BstV1I | GCAGC | 8 cut(s) | 115, 299, 1388, 1759, 2212, 2289, 2364, 2594 |
| BstV2I | GAAGAC | 1 cut(s) | 2241 |
| BstX2I | RGATCY | 4 cut(s) | 916, 2203, 2850, 3303 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3438 |
| BstYI | RGATCY | 4 cut(s) | 916, 2203, 2850, 3303 |
| BsuI | GTATCC | 1 cut(s) | 192 |
| BsuRI | GGCC | 8 cut(s) | 73, 1094, 2075, 2138, 2681, 2774, 2969, 3423 |
| BtgZI | GCGATG | 2 cut(s) | 2444, 2872 |
| BtsCI | GGATG | 8 cut(s) | 574, 971, 1272, 1606, 1714, 1920, 3486, 3498 |
| BtsI | GCAGTG | 4 cut(s) | 78, 390, 966, 2772 |
| BveI | ACCTGC | 1 cut(s) | 3254 |
| Cac8I | GCNNGC | 6 cut(s) | 64, 101, 1444, 1995, 2350, 2763 |
| CfoI | GCGC | 4 cut(s) | 686, 985, 1904, 3108 |
| Csp6I | GTAC | 6 cut(s) | 211, 1422, 1870, 2869, 2878, 3436 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3281, 3316 |
| CviQI | GTAC | 6 cut(s) | 211, 1422, 1870, 2869, 2878, 3436 |
| DraI | TTTAAA | 2 cut(s) | 1242, 2448 |
| DraIII | CACNNNGTG | 1 cut(s) | 2473 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3714 |
| EaeI | YGGCCR | 3 cut(s) | 2136, 2679, 2772 |
| Eam1104I | CTCTTC | 3 cut(s) | 1904, 1932, 3477 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3714 |
| EarI | CTCTTC | 3 cut(s) | 1904, 1932, 3477 |
| Eco130I | CCWWGG | 3 cut(s) | 2505, 2676, 3226 |
| Eco147I | AGGCCT | 1 cut(s) | 73 |
| Eco24I | GRGCYC | 2 cut(s) | 1096, 2901 |
| Eco31I | GGTCTC | 1 cut(s) | 2620 |
| Eco47I | GGWCC | 6 cut(s) | 703, 845, 1635, 2153, 2563, 3258 |
| Eco47III | AGCGCT | 2 cut(s) | 685, 1903 |
| Eco57I | CTGAAG | 4 cut(s) | 823, 1013, 2444, 2502 |
| EcoO109I | RGGNCCY | 4 cut(s) | 703, 1092, 1093, 2153 |
| EcoRI | GAATTC | 2 cut(s) | 868, 1528 |
| EcoRII | CCWGG | 1 cut(s) | 118 |
| EcoT14I | CCWWGG | 3 cut(s) | 2505, 2676, 3226 |
| EcoT22I | ATGCAT | 1 cut(s) | 2267 |
| EcoT38I | GRGCYC | 2 cut(s) | 1096, 2901 |
| ErhI | CCWWGG | 3 cut(s) | 2505, 2676, 3226 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 630, 662, 1540, 1572 |
| FaqI | GGGAC | 1 cut(s) | 1493 |
| FauI | CCCGC | 1 cut(s) | 123 |
| FauNDI | CATATG | 4 cut(s) | 575, 1345, 1521, 3320 |
| FbaI | TGATCA | 4 cut(s) | 654, 661, 1711, 3526 |
| Fnu4HI | GCNGC | 9 cut(s) | 104, 288, 1377, 1773, 2226, 2303, 2353, 2608, 3742 |
| FokI | GGATG | 8 cut(s) | 581, 958, 1279, 1613, 1721, 1927, 3473, 3485 |
| FriOI | GRGCYC | 2 cut(s) | 1096, 2901 |
| Fsp4HI | GCNGC | 9 cut(s) | 104, 288, 1377, 1773, 2226, 2303, 2353, 2608, 3742 |
| FspBI | CTAG | 6 cut(s) | 96, 2174, 2216, 3146, 3636, 3751 |
| GlaI | GCGC | 4 cut(s) | 685, 984, 1903, 3107 |
| GluI | GCNGC | 9 cut(s) | 104, 288, 1377, 1773, 2226, 2303, 2353, 2608, 3742 |
| GsaI | CCCAGC | 1 cut(s) | 3749 |
| GsuI | CTGGAG | 1 cut(s) | 3035 |
| HaeII | RGCGCY | 2 cut(s) | 687, 1905 |
| HaeIII | GGCC | 8 cut(s) | 73, 1094, 2075, 2138, 2681, 2774, 2969, 3423 |
| HapII | CCGG | 5 cut(s) | 975, 1228, 1372, 2086, 2611 |
| HhaI | GCGC | 4 cut(s) | 686, 985, 1904, 3108 |
| Hin1I | GRCGYC | 1 cut(s) | 2990 |
| Hin6I | GCGC | 4 cut(s) | 684, 983, 1902, 3106 |
| HinP1I | GCGC | 4 cut(s) | 684, 983, 1902, 3106 |
| HincII | GTYRAC | 1 cut(s) | 514 |
| HindII | GTYRAC | 1 cut(s) | 514 |
| HpaI | GTTAAC | 1 cut(s) | 514 |
| HpaII | CCGG | 5 cut(s) | 975, 1228, 1372, 2086, 2611 |
| HphI | GGTGA | 5 cut(s) | 873, 1364, 1466, 1737, 2324 |
| Hpy166II | GTNNAC | 5 cut(s) | 424, 514, 845, 2878, 3368 |
| Hpy8I | GTNNAC | 5 cut(s) | 424, 514, 845, 2878, 3368 |
| HpyAV | CCTTC | 9 cut(s) | 941, 1851, 2001, 2314, 2419, 2480, 2554, 2623, 2747 |
| HpyCH4III | ACNGT | 9 cut(s) | 51, 436, 691, 2577, 3262, 3365, 3445, 3507, 3690 |
| HpyCH4IV | ACGT | 2 cut(s) | 1210, 2990 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 2507, 2771 |
| HpySE526I | ACGT | 2 cut(s) | 1210, 2990 |
| Hsp92I | GRCGYC | 1 cut(s) | 2990 |
| HspAI | GCGC | 4 cut(s) | 684, 983, 1902, 3106 |
| Ksp22I | TGATCA | 4 cut(s) | 654, 661, 1711, 3526 |
| KspAI | GTTAAC | 1 cut(s) | 514 |
| LmnI | GCTCC | 2 cut(s) | 42, 319 |
| Lsp1109I | GCAGC | 8 cut(s) | 115, 299, 1388, 1759, 2212, 2289, 2364, 2594 |
| LweI | GCATC | 7 cut(s) | 620, 980, 1388, 2192, 2488, 3339, 3634 |
| MaeI | CTAG | 6 cut(s) | 96, 2174, 2216, 3146, 3636, 3751 |
| MaeII | ACGT | 2 cut(s) | 1210, 2990 |
| MbiI | CCGCTC | 1 cut(s) | 1864 |
| MfeI | CAATTG | 1 cut(s) | 3265 |
| MflI | RGATCY | 4 cut(s) | 916, 2203, 2850, 3303 |
| MhlI | GDGCHC | 4 cut(s) | 773, 1096, 2901, 3370 |
| MlsI | TGGCCA | 3 cut(s) | 2138, 2681, 2774 |
| MluNI | TGGCCA | 3 cut(s) | 2138, 2681, 2774 |
| MlyI | GAGTC | 4 cut(s) | 1415, 1677, 1751, 3610 |
| MmeI | TCCRAC | 7 cut(s) | 350, 430, 878, 1662, 3098, 3331, 3526 |
| Mox20I | TGGCCA | 3 cut(s) | 2138, 2681, 2774 |
| Mph1103I | ATGCAT | 1 cut(s) | 2267 |
| MroXI | GAANNNNTTC | 3 cut(s) | 528, 2463, 3551 |
| MscI | TGGCCA | 3 cut(s) | 2138, 2681, 2774 |
| MslI | CAYNNNNRTG | 3 cut(s) | 728, 3228, 3611 |
| Msp20I | TGGCCA | 3 cut(s) | 2138, 2681, 2774 |
| MspA1I | CMGCKG | 2 cut(s) | 290, 696 |
| MspI | CCGG | 5 cut(s) | 975, 1228, 1372, 2086, 2611 |
| MspR9I | CCNGG | 4 cut(s) | 120, 1228, 1373, 2612 |
| MunI | CAATTG | 1 cut(s) | 3265 |
| Mva1269I | GAATGC | 3 cut(s) | 2267, 2763, 3108 |
| MvaI | CCWGG | 1 cut(s) | 120 |
| MvnI | CGCG | 2 cut(s) | 130, 985 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 2507, 2771 |
| NciI | CCSGG | 3 cut(s) | 1228, 1373, 2612 |
| NdeI | CATATG | 4 cut(s) | 575, 1345, 1521, 3320 |
| NlaIV | GGNNCC | 5 cut(s) | 315, 705, 1094, 2256, 3305 |
| NsiI | ATGCAT | 1 cut(s) | 2267 |
| NspI | RCATGY | 2 cut(s) | 66, 1302 |
| OliI | CACNNNNGTG | 2 cut(s) | 728, 3228 |
| PaeI | GCATGC | 1 cut(s) | 66 |
| PaqCI | CACCTGC | 1 cut(s) | 3254 |
| PceI | AGGCCT | 1 cut(s) | 73 |
| PctI | GAATGC | 3 cut(s) | 2267, 2763, 3108 |
| PdmI | GAANNNNTTC | 3 cut(s) | 528, 2463, 3551 |
| PfeI | GAWTC | 9 cut(s) | 402, 794, 1270, 1551, 2061, 2713, 2739, 2863, 3651 |
| PflFI | GACNNNGTC | 1 cut(s) | 7 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2806 |
| PkrI | GCNGC | 9 cut(s) | 105, 289, 1378, 1774, 2227, 2304, 2354, 2609, 3743 |
| PleI | GAGTC | 4 cut(s) | 1414, 1676, 1750, 3610 |
| PpsI | GAGTC | 4 cut(s) | 1414, 1676, 1750, 3610 |
| Ppu21I | YACGTR | 1 cut(s) | 1211 |
| PpuMI | RGGWCCY | 2 cut(s) | 703, 2153 |
| Psp5II | RGGWCCY | 2 cut(s) | 703, 2153 |
| Psp6I | CCWGG | 1 cut(s) | 118 |
| PspFI | CCCAGC | 1 cut(s) | 3745 |
| PspGI | CCWGG | 1 cut(s) | 118 |
| PspN4I | GGNNCC | 5 cut(s) | 315, 705, 1094, 2256, 3305 |
| PspOMI | GGGCCC | 1 cut(s) | 1092 |
| PspPPI | RGGWCCY | 2 cut(s) | 703, 2153 |
| PsuI | RGATCY | 4 cut(s) | 916, 2203, 2850, 3303 |
| PsyI | GACNNNGTC | 1 cut(s) | 7 |
| PvuII | CAGCTG | 1 cut(s) | 290 |
| RsaI | GTAC | 6 cut(s) | 212, 1423, 1871, 2870, 2879, 3437 |
| RsaNI | GTAC | 6 cut(s) | 211, 1422, 1870, 2869, 2878, 3436 |
| RseI | CAYNNNNRTG | 3 cut(s) | 728, 3228, 3611 |
| SatI | GCNGC | 9 cut(s) | 104, 288, 1377, 1773, 2226, 2303, 2353, 2608, 3742 |
| ScaI | AGTACT | 1 cut(s) | 1423 |
| SchI | GAGTC | 4 cut(s) | 1415, 1677, 1751, 3610 |
| ScrFI | CCNGG | 4 cut(s) | 120, 1228, 1373, 2612 |
| SduI | GDGCHC | 4 cut(s) | 773, 1096, 2901, 3370 |
| SfaNI | GCATC | 7 cut(s) | 620, 980, 1388, 2192, 2488, 3339, 3634 |
| SfcI | CTRYAG | 2 cut(s) | 492, 1897 |
| SinI | GGWCC | 6 cut(s) | 703, 845, 1635, 2153, 2563, 3258 |
| SmiI | ATTTAAAT | 1 cut(s) | 1242 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 728, 3228, 3611 |
| SmlI | CTYRAG | 4 cut(s) | 67, 427, 2093, 3020 |
| SmoI | CTYRAG | 4 cut(s) | 67, 427, 2093, 3020 |
| SphI | GCATGC | 1 cut(s) | 66 |
| SseBI | AGGCCT | 1 cut(s) | 73 |
| SsiI | CCGC | 5 cut(s) | 130, 694, 985, 1452, 1864 |
| SspI | AATATT | 4 cut(s) | 527, 2127, 2338, 3723 |
| SspMI | CTAG | 6 cut(s) | 96, 2174, 2216, 3146, 3636, 3751 |
| StuI | AGGCCT | 1 cut(s) | 73 |
| StyD4I | CCNGG | 4 cut(s) | 118, 1226, 1371, 2610 |
| StyI | CCWWGG | 3 cut(s) | 2505, 2676, 3226 |
| SwaI | ATTTAAAT | 1 cut(s) | 1242 |
| TaaI | ACNGT | 9 cut(s) | 51, 436, 691, 2577, 3262, 3365, 3445, 3507, 3690 |
| TaiI | ACGT | 2 cut(s) | 1213, 2993 |
| TaqI | TCGA | 5 cut(s) | 246, 1029, 1368, 1532, 3411 |
| TaqII | GACCGA | 1 cut(s) | 1244 |
| TatI | WGTACW | 6 cut(s) | 210, 1421, 1869, 2868, 2877, 3435 |
| TfiI | GAWTC | 9 cut(s) | 402, 794, 1270, 1551, 2061, 2713, 2739, 2863, 3651 |
| TseI | GCWGC | 9 cut(s) | 103, 287, 1376, 1772, 2225, 2302, 2352, 2607, 3741 |
| TspGWI | ACGGA | 2 cut(s) | 827, 3644 |
| Tth111I | GACNNNGTC | 1 cut(s) | 7 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2806 |
| VneI | GTGCAC | 1 cut(s) | 3366 |
| VpaK11BI | GGWCC | 6 cut(s) | 703, 845, 1635, 2153, 2563, 3258 |
| XceI | RCATGY | 2 cut(s) | 66, 1302 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 107, 307 |
| XmnI | GAANNNNTTC | 3 cut(s) | 528, 2463, 3551 |
| XspI | CTAG | 6 cut(s) | 96, 2174, 2216, 3146, 3636, 3751 |
| ZraI | GACGTC | 1 cut(s) | 2991 |
| ZrmI | AGTACT | 1 cut(s) | 1423 |
| Zsp2I | ATGCAT | 1 cut(s) | 2267 |