Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003781

Physical Location & Seq

Genomic Coordinates Reverse (-)

7357200 .. 7366694

Gene Structure 9495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g12391.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

ATGGGTGCGGAGATACAGCCGAAGAAGCTTCTCGCCAGAGAAGAAGAAGCTGCTCACAAAGCGCGTTTCTACCAGATTGTTCTCAGTTGGGACTTCTTCCGCATTCTCCACGAGGCCCACAAACGAAAAGAGGAAAAGGAAAAGGAAAAGGAAAAGGGTGAGACTACAGATGAGGACTTGCGATTTCGAAAAGTCAAGGACAGTTATACAGACGTTGAGGATTATATCTCCACATACGAGCCTCTTCTCTTCGAAGAAGTCAAGTCCTTGATAAGCAAGGACAAGGACCAGTGGGGAGCAGGCAAGACAACATGTGTGAAGGAGTGCAAACAAGACAAGGGGTTTCACATTGTTACTGTTTGTGTTGACATGGATGAGGGCATGGACAAAGAGAAAAGAGTGAAGAACAATGATCTTGTTCTATTGTCGAAACCACTATGGTCGAAATCAAAGGTTCCAGAGGAAAACTATGCATTTGCAGTGGTGGAAGGTCAGACAAAAGAGTCTATAATGCTTAGAATGTATTTGGCCGGAGAAGTCAGAGATTTGAATACAGATGTGATTCATGATTGTCCAAGGCTGGCAAAGGTGCGGTCATTGGTTACTTCTGATGGCGAAGGAGATAGGCTTTTTGACCTTTCAAAGATTTGCAGTTTATCTACTATTACTTGTGAATATATAGCTTTGCGGTCAATTGGTTCTCTCCCGTTTATGGATTTGATACTTGCACCTTCTGAGGAAAATCTTGATGCAGAAGCCCAAGCCTGGAAAGTTTCTGGACCACTTGAGGAATATATAAAAGACAATCTTAATGAATCTCAACAAAAAGCCATACAGGTCGGTCTATCACGTAAACCATTTATCCTGATACAGGGTCCTCCAGGAACAGGAAAGACACAGACTATCCTTGCGCTACTTAGTGCCATTCTGCATGCTATTCCTGCAAGAGTTAAAGCCAGGGTTTCACTGCTAGACATAAAGCAAAAGCCAAAGTCACGTAATCAGGAGAAATTCAATCACTGGCGAATAGCGTCTCCCTGGCTTAGTGGTAGCAATCCTAGAGAGAAAACAATGCCTGTTAATGGCGATGATGGGTTTTTTCCAACGACTAGAAATGAGTTTCAACCAGAAGTAGTCAGTTCTATTCGTAAATATCGATTATGTGTCCTTGTCTGTGCTCCTTCAAACTCTGCACTCGATGAGATAGTATTGCGTGTTATGAACAACGGTGTGCGGGATGAAAGTGACCGTTCATATAGTCCCAAAATTGTGCGGATTGGGCTCAAGCCACATCATTCTATCCGACCTGTCTTCATTAATGAGCTGGTAGAAAGAAAGAAGAGAAGTATGGGGGGTGCTAAACTAGATGGAGATGATGCACTTAAAGCTGCAATTTTGGAGGAGGCTGTAATTGTTTTCTCGACCCTCAGTAGTAGTCATCCATCCCATTTCAAACGGGATCATGGTTTTGATGTTGTTATAATAGATGAAGCTGCACAAGCAGTTGAACCAGCAACCCTTCTTCCATTGACGAATGGATGCCAACAAGTATTTCTGATAGGTGACCCGGTTCAACTGCCGGCTACCGTATCGTCTACCGTTGCTAGGAAATTTGGGTATGAAAGGAGTATGTTCGAGAGATTTCAGAGGGCTGGATATCCAGTGACCATGCTCAAGATGCAGTATCGTATGCATCCAGAGATCAGAAAATTTCCTTCTGAAAAGTTTTATGGAAGCTCATTGGAAGATGGTCCTAATATCAAAGAGCAGACAAAGCGTTCATGGCATGAGTATCGCTGCTTCGGACCATTTTGCTTCTTTGACTTGCATGAAGGGAAAGAAGCCATGTCTGAGGCAAGTGGATCTTGGGTGAATGCTGATGAGGTTGAATTTGTCTTGAACTTGTATCACAAGTTGGTGAGCCGATATCCAGAGCTTAAATCAAGTAATTATTTTGCAATCATATCTCCTTACCGTGCACAAGTAGACCTCTTGAAAGAATGTTTCAAAAGTACTTTCGGAGTAGACTCTGAGAAAGAAGTGGAAATCACTACTCTTGATGGTTGCCAGGGACGTGAAAAGGATGTTGCAATATTTTCTTGTGTCAGGGCAAGCAAGAAAGGAGGCATTGGGCATGTGGAAAATTTTCGGCGAATGAATGTTGGGATTACTAGAGCAAAAGCATCTGTCCTGGTGGTTGGATCTGCGTCAACATTGAAGAGGAGTGGGGAAAGCGCTGAAAAAGATAACCATTGTAATAGGGAGAACGATAAAAAAAAATTAAAAGACCATTGGAAACGCCTAGTGGAAAGCGCCGAAGAGAGACAATGCTTAATTAAGGTATCGAAGCCATATGCTGCGTTTTTCAGTGATGAGAGTCTGGAATCTATGAGAACCGGGGAAGAAATCATGCCAAGCGGGGAGGTTCAAAATGATGAATTAGATTACAGCATGCCTACTTACACTGTTGGGGATGCTGATGAAGGGCAGGGAGATGATAATGGCTATGGTGATGGCGACGAGATGGACGTGGATGATGGAGGTTTTGGAGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006935 GO:0007154 GO:0007275 GO:0008150 GO:0009553 GO:0009605 GO:0009856 GO:0009875 GO:0009987 GO:0010183 GO:0022414 GO:0032501 GO:0032502 GO:0040011 GO:0042221 GO:0042330 GO:0044706 GO:0048229 GO:0048856 GO:0048868 GO:0050896 GO:0050918 GO:0051704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_11 AAA_12

Protein Analysis

853

Amino Acids

96.22

Weight (kDa)

5.84

Isoelectric Point (pI)

38.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_11	PF13086	269 - 448	9e-23	AAA domain
AAA_11	PF13086	459 - 532	1.1e-25	AAA domain
AAA_12	PF13087	540 - 694	2.9e-39	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15570 AT4G15570 AT4G15570 AT4G15570
fragaria_vesca	FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_4g11281 FvH4_4g11281 FvH4_4g11281 FvH4_4g11281
malus_domestica	MD15G1420100.v1.1 MD15G1420400.v1.1
prunus_persica	Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1
pyrus_communis	pycom15g37290
rosa_chinensis	RchiOBHm_Chr4g0407481
rosa_laevigata	RLG00000008716
rosa_multiflora	Rmu_sc0004841.1_g000016
rosa_roxburghii	Rroxscaffold_5G00352130
rosa_rugosa	Rorug04G0080000
rosa_samantha	Rh4AG144700 Rh4BG142600 Rh4CG151400 Rh4DG138600
rosa_wichuraiana	Rw4G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1481
AasI	GACNNNNNNGTC	1 cut(s)	502
AccI	GTMKAC	3 cut(s)	1595, 1986, 2025
AccII	CGCG	1 cut(s)	64
AciI	CCGC	7 cut(s)	8, 100, 592, 688, 1234, 1273, 2418
AclWI	GGATC	3 cut(s)	1467, 1870, 2209
AcoI	YGGCCR	1 cut(s)	528
AcsI	RAATTY	5 cut(s)	1010, 1610, 1709, 1889, 2143
AfaI	GTAC	1 cut(s)	2014
AfeI	AGCGCT	1 cut(s)	2236
AfiI	CCNNNNNNNGG	6 cut(s)	712, 765, 871, 887, 1082, 1605
AflIII	ACRYGT	1 cut(s)	311
AjiI	CACGTC	2 cut(s)	2075, 2530
AjnI	CCWGG	6 cut(s)	764, 880, 956, 1037, 2067, 2190
AjuI	GAANNNNNNNTTGG	2 cut(s)	1536, 1568
AluBI	AGCT	8 cut(s)	28, 50, 683, 1324, 1388, 1493, 1737, 1936
AluI	AGCT	8 cut(s)	28, 50, 683, 1324, 1388, 1493, 1737, 1936
Alw21I	GWGCWC	2 cut(s)	1180, 1981
Alw26I	GTCTC	3 cut(s)	155, 1038, 2317
Alw44I	GTGCAC	1 cut(s)	1977
AlwI	GGATC	3 cut(s)	1467, 1870, 2209
Aor51HI	AGCGCT	1 cut(s)	2236
AoxI	GGCC	2 cut(s)	114, 528
ApaLI	GTGCAC	1 cut(s)	1977
ApeKI	GCWGC	5 cut(s)	50, 1388, 1493, 1797, 2357
ApoI	RAATTY	5 cut(s)	1010, 1610, 1709, 1889, 2143
ArsI	GACNNNNNNTTYG	2 cut(s)	578, 610
AseI	ATTAAT	1 cut(s)	1317
Asp700I	GAANNNNTTC	1 cut(s)	2145
AspLEI	GCGC	4 cut(s)	64, 913, 2237, 2315
AspS9I	GGNCC	6 cut(s)	115, 286, 779, 875, 1751, 1805
AsuC2I	CCSGG	2 cut(s)	1568, 2398
AsuHPI	GGTGA	5 cut(s)	170, 1574, 1882, 1930, 2522
AsuII	TTCGAA	2 cut(s)	187, 252
AvaII	GGWCC	5 cut(s)	286, 779, 875, 1751, 1805
BaeGI	GKGCMC	1 cut(s)	1981
BanII	GRGCYC	1 cut(s)	1284
BarI	GAAGNNNNNNTAC	2 cut(s)	1784, 1816
BauI	CACGAG	1 cut(s)	110
BbsI	GAAGAC	1 cut(s)	1303
Bbv12I	GWGCWC	2 cut(s)	1180, 1981
BbvI	GCAGC	5 cut(s)	37, 1375, 1480, 1784, 2344
BccI	CCATC	9 cut(s)	605, 1085, 1361, 1450, 1742, 2054, 2507, 2518, 2531
BcgI	CGANNNNNNTGC	2 cut(s)	1775, 1809
BciT130I	CCWGG	6 cut(s)	766, 882, 958, 1039, 2069, 2192
BcnI	CCSGG	2 cut(s)	1568, 2398
BcoDI	GTCTC	3 cut(s)	155, 1038, 2317
BfaI	CTAG	7 cut(s)	971, 1059, 1110, 1364, 1605, 2172, 2303
BfmI	CTRYAG	1 cut(s)	165
BfoI	RGCGCY	2 cut(s)	2238, 2316
BisI	GCNGC	5 cut(s)	51, 1389, 1494, 1798, 2358
BlsI	GCNGC	5 cut(s)	52, 1390, 1495, 1799, 2359
BmcAI	AGTACT	1 cut(s)	2014
Bme1390I	CCNGG	8 cut(s)	766, 882, 958, 1039, 1568, 2069, 2192, 2398
Bme18I	GGWCC	5 cut(s)	286, 779, 875, 1751, 1805
BmgBI	CACGTC	2 cut(s)	2075, 2530
BmgT120I	GGNCC	6 cut(s)	115, 286, 779, 875, 1751, 1805
BmiI	GGNNCC	2 cut(s)	456, 876
BmrFI	CCNGG	8 cut(s)	766, 882, 958, 1039, 1568, 2069, 2192, 2398
BmsI	GCATC	7 cut(s)	739, 1366, 1529, 1668, 1702, 2192, 2464
BpiI	GAAGAC	1 cut(s)	1303
BpmI	CTGGAG	1 cut(s)	864
Bpu14I	TTCGAA	2 cut(s)	187, 252
BpuEI	CTTGAG	3 cut(s)	806, 1268, 1658
BpuMI	CCSGG	2 cut(s)	1568, 2398
Bsa29I	ATCGAT	1 cut(s)	1156
BsaAI	YACGTR	2 cut(s)	851, 998
BsaJI	CCNNGG	5 cut(s)	575, 957, 1037, 2068, 2397
Bsc4I	CCNNNNNNNGG	6 cut(s)	712, 765, 871, 887, 1082, 1605
Bse118I	RCCGGY	1 cut(s)	1579
Bse1I	ACTGG	3 cut(s)	289, 1025, 1661
BseBI	CCWGG	6 cut(s)	766, 882, 958, 1039, 2069, 2192
BseCI	ATCGAT	1 cut(s)	1156
BseDI	CCNNGG	5 cut(s)	575, 957, 1037, 2068, 2397
BseGI	GGATG	9 cut(s)	379, 1243, 1438, 1442, 1544, 1693, 2089, 2479, 2539
BseLI	CCNNNNNNNGG	6 cut(s)	712, 765, 871, 887, 1082, 1605
BseMII	CTCAG	5 cut(s)	97, 726, 1441, 1842, 2022
BseNI	ACTGG	3 cut(s)	289, 1025, 1661
BseRI	GAGGAG	2 cut(s)	1415, 2236
BseSI	GKGCMC	1 cut(s)	1981
BseXI	GCAGC	5 cut(s)	37, 1375, 1480, 1784, 2344
BsgI	GTGCAG	2 cut(s)	1176, 1479
Bsh1236I	CGCG	1 cut(s)	64
BshFI	GGCC	2 cut(s)	116, 530
BshVI	ATCGAT	1 cut(s)	1156
BsiHKAI	GWGCWC	2 cut(s)	1180, 1981
BsiSI	CCGG	4 cut(s)	531, 1568, 1580, 2397
BslFI	GGGAC	3 cut(s)	104, 1245, 2085
BslI	CCNNNNNNNGG	6 cut(s)	712, 765, 871, 887, 1082, 1605
BsmAI	GTCTC	3 cut(s)	155, 1038, 2317
BsmBI	CGTCTC	1 cut(s)	1038
BsmFI	GGGAC	3 cut(s)	104, 1245, 2085
BsmI	GAATGC	2 cut(s)	102, 1879
BsnI	GGCC	2 cut(s)	116, 530
Bsp119I	TTCGAA	2 cut(s)	187, 252
Bsp1286I	GDGCHC	3 cut(s)	1180, 1284, 1981
Bsp143I	GATC	5 cut(s)	412, 1459, 1701, 1862, 2201
BspACI	CCGC	7 cut(s)	8, 100, 592, 688, 1234, 1273, 2418
BspANI	GGCC	2 cut(s)	116, 530
BspCNI	CTCAG	5 cut(s)	96, 727, 1440, 1843, 2023
BspDI	ATCGAT	1 cut(s)	1156
BspFNI	CGCG	1 cut(s)	64
BspHI	TCATGA	1 cut(s)	565
BspLI	GGNNCC	2 cut(s)	456, 876
BspPI	GGATC	3 cut(s)	1467, 1870, 2209
BspT104I	TTCGAA	2 cut(s)	187, 252
BsrFI	RCCGGY	1 cut(s)	1579
BsrI	ACTGG	3 cut(s)	289, 1025, 1661
BssAI	RCCGGY	1 cut(s)	1579
BssECI	CCNNGG	5 cut(s)	575, 957, 1037, 2068, 2397
BssMI	GATC	5 cut(s)	412, 1459, 1701, 1862, 2201
BssSI	CACGAG	1 cut(s)	110
BssT1I	CCWWGG	1 cut(s)	575
Bst2BI	CACGAG	1 cut(s)	110
Bst2UI	CCWGG	6 cut(s)	766, 882, 958, 1039, 2069, 2192
Bst4CI	ACNGT	8 cut(s)	203, 358, 1229, 1250, 1588, 1600, 1976, 2467
Bst6I	CTCTTC	5 cut(s)	249, 254, 1334, 2213, 2313
BstBAI	YACGTR	2 cut(s)	851, 998
BstBI	TTCGAA	2 cut(s)	187, 252
BstC8I	GCNNGC	6 cut(s)	301, 582, 933, 1581, 2113, 2453
BstDEI	CTNAG	8 cut(s)	83, 515, 735, 917, 1043, 1427, 1851, 2031
BstEII	GGTNACC	1 cut(s)	1562
BstENI	CCTNNNNNAGG	1 cut(s)	869
BstF5I	GGATG	9 cut(s)	379, 1243, 1438, 1442, 1544, 1693, 2089, 2479, 2539
BstFNI	CGCG	1 cut(s)	64
BstH2I	RGCGCY	2 cut(s)	2238, 2316
BstHHI	GCGC	4 cut(s)	64, 913, 2237, 2315
BstKTI	GATC	5 cut(s)	415, 1462, 1704, 1865, 2204
BstMAI	GTCTC	3 cut(s)	155, 1038, 2317
BstMBI	GATC	5 cut(s)	412, 1459, 1701, 1862, 2201
BstMWI	GCNNNNNNNGC	9 cut(s)	25, 59, 941, 1279, 1385, 1499, 1678, 1774, 1783
BstNI	CCWGG	6 cut(s)	766, 882, 958, 1039, 2069, 2192
BstNSI	RCATGY	4 cut(s)	315, 935, 2138, 2455
BstPI	GGTNACC	1 cut(s)	1562
BstSCI	CCNGG	8 cut(s)	764, 880, 956, 1037, 1566, 2067, 2190, 2396
BstSFI	CTRYAG	1 cut(s)	165
BstSLI	GKGCMC	1 cut(s)	1981
BstUI	CGCG	1 cut(s)	64
BstV1I	GCAGC	5 cut(s)	37, 1375, 1480, 1784, 2344
BstV2I	GAAGAC	1 cut(s)	1303
BstX2I	RGATCY	2 cut(s)	1862, 2201
BstYI	RGATCY	2 cut(s)	1862, 2201
Bsu15I	ATCGAT	1 cut(s)	1156
BsuRI	GGCC	2 cut(s)	116, 530
BsuTUI	ATCGAT	1 cut(s)	1156
BtgZI	GCGATG	1 cut(s)	1101
BtrI	CACGTC	2 cut(s)	2075, 2530
BtsCI	GGATG	9 cut(s)	379, 1243, 1438, 1442, 1544, 1693, 2089, 2479, 2539
BtsI	GCAGTG	2 cut(s)	486, 965
BtsIMutI	CAGTG	7 cut(s)	296, 486, 965, 1018, 1668, 2374, 2463
Cac8I	GCNNGC	6 cut(s)	301, 582, 933, 1581, 2113, 2453
CciI	TCATGA	1 cut(s)	565
CfoI	GCGC	4 cut(s)	64, 913, 2237, 2315
Cfr10I	RCCGGY	1 cut(s)	1579
Cfr13I	GGNCC	6 cut(s)	115, 286, 779, 875, 1751, 1805
ClaI	ATCGAT	1 cut(s)	1156
CseI	GACGC	2 cut(s)	1020, 2196
Csp6I	GTAC	1 cut(s)	2013
CviQI	GTAC	1 cut(s)	2013
DdeI	CTNAG	8 cut(s)	83, 515, 735, 917, 1043, 1427, 1851, 2031
DpnI	GATC	5 cut(s)	414, 1461, 1703, 1864, 2203
DpnII	GATC	5 cut(s)	412, 1459, 1701, 1862, 2201
DrdI	GACNNNNNNGTC	1 cut(s)	502
DseDI	GACNNNNNNGTC	1 cut(s)	502
EaeI	YGGCCR	1 cut(s)	528
Eam1104I	CTCTTC	5 cut(s)	249, 254, 1334, 2213, 2313
EarI	CTCTTC	5 cut(s)	249, 254, 1334, 2213, 2313
Eco130I	CCWWGG	1 cut(s)	575
Eco24I	GRGCYC	1 cut(s)	1284
Eco32I	GATATC	2 cut(s)	1658, 1928
Eco47I	GGWCC	5 cut(s)	286, 779, 875, 1751, 1805
Eco47III	AGCGCT	1 cut(s)	2236
Eco91I	GGTNACC	1 cut(s)	1562
EcoNI	CCTNNNNNAGG	1 cut(s)	869
EcoO109I	RGGNCCY	1 cut(s)	875
EcoO65I	GGTNACC	1 cut(s)	1562
EcoRII	CCWGG	6 cut(s)	764, 880, 956, 1037, 2067, 2190
EcoRV	GATATC	2 cut(s)	1658, 1928
EcoT14I	CCWWGG	1 cut(s)	575
EcoT22I	ATGCAT	2 cut(s)	475, 1695
EcoT38I	GRGCYC	1 cut(s)	1284
ErhI	CCWWGG	1 cut(s)	575
Esp3I	CGTCTC	1 cut(s)	1038
FalI	AAGNNNNNCTT	4 cut(s)	792, 824, 1849, 1881
FaqI	GGGAC	3 cut(s)	104, 1245, 2085
FauI	CCCGC	2 cut(s)	1227, 2411
FauNDI	CATATG	1 cut(s)	2353
FblI	GTMKAC	3 cut(s)	1595, 1986, 2025
Fnu4HI	GCNGC	5 cut(s)	51, 1389, 1494, 1798, 2358
FokI	GGATG	9 cut(s)	386, 1250, 1425, 1429, 1551, 1680, 2096, 2486, 2546
FriOI	GRGCYC	1 cut(s)	1284
Fsp4HI	GCNGC	5 cut(s)	51, 1389, 1494, 1798, 2358
FspBI	CTAG	7 cut(s)	971, 1059, 1110, 1364, 1605, 2172, 2303
GlaI	GCGC	4 cut(s)	63, 912, 2236, 2314
GluI	GCNGC	5 cut(s)	51, 1389, 1494, 1798, 2358
GsuI	CTGGAG	1 cut(s)	864
HaeII	RGCGCY	2 cut(s)	2238, 2316
HaeIII	GGCC	2 cut(s)	116, 530
HapII	CCGG	4 cut(s)	531, 1568, 1580, 2397
HgaI	GACGC	2 cut(s)	1020, 2196
HhaI	GCGC	4 cut(s)	64, 913, 2237, 2315
Hin6I	GCGC	4 cut(s)	62, 911, 2235, 2313
HinP1I	GCGC	4 cut(s)	62, 911, 2235, 2313
HincII	GTYRAC	2 cut(s)	367, 2211
HindII	GTYRAC	2 cut(s)	367, 2211
HindIII	AAGCTT	1 cut(s)	26
HinfI	GANTC	6 cut(s)	503, 562, 815, 2027, 2377, 2384
HpaII	CCGG	4 cut(s)	531, 1568, 1580, 2397
HphI	GGTGA	5 cut(s)	170, 1574, 1882, 1930, 2522
Hpy166II	GTNNAC	7 cut(s)	367, 854, 1596, 1979, 1987, 2026, 2211
Hpy8I	GTNNAC	7 cut(s)	367, 854, 1596, 1979, 1987, 2026, 2211
Hpy99I	CGWCG	1 cut(s)	2522
HpyAV	CCTTC	9 cut(s)	313, 482, 611, 741, 1191, 1529, 1725, 1826, 2477
HpyCH4III	ACNGT	8 cut(s)	203, 358, 1229, 1250, 1588, 1600, 1976, 2467
HpyCH4IV	ACGT	5 cut(s)	213, 850, 997, 2074, 2529
HpyF10VI	GCNNNNNNNGC	9 cut(s)	25, 59, 941, 1279, 1385, 1499, 1678, 1774, 1783
HpyF3I	CTNAG	8 cut(s)	83, 515, 735, 917, 1043, 1427, 1851, 2031
HpySE526I	ACGT	5 cut(s)	213, 850, 997, 2074, 2529
HspAI	GCGC	4 cut(s)	62, 911, 2235, 2313
KroI	GCCGGC	1 cut(s)	1579
KroNI	GCCGGC	1 cut(s)	1581
Kzo9I	GATC	5 cut(s)	412, 1459, 1701, 1862, 2201
LmnI	GCTCC	2 cut(s)	296, 1183
Lsp1109I	GCAGC	5 cut(s)	37, 1375, 1480, 1784, 2344
LweI	GCATC	7 cut(s)	739, 1366, 1529, 1668, 1702, 2192, 2464
MaeI	CTAG	7 cut(s)	971, 1059, 1110, 1364, 1605, 2172, 2303
MaeII	ACGT	5 cut(s)	213, 850, 997, 2074, 2529
MaeIII	GTNAC	6 cut(s)	352, 601, 993, 1244, 1562, 1663
MalI	GATC	5 cut(s)	414, 1461, 1703, 1864, 2203
MboI	GATC	5 cut(s)	412, 1459, 1701, 1862, 2201
MfeI	CAATTG	1 cut(s)	693
MflI	RGATCY	2 cut(s)	1862, 2201
MhlI	GDGCHC	3 cut(s)	1180, 1284, 1981
MlyI	GAGTC	3 cut(s)	512, 2021, 2386
MmeI	TCCRAC	3 cut(s)	1127, 1327, 2179
Mph1103I	ATGCAT	2 cut(s)	475, 1695
MroNI	GCCGGC	1 cut(s)	1579
MroXI	GAANNNNTTC	1 cut(s)	2145
MseI	TTAA	9 cut(s)	810, 951, 1080, 1317, 1383, 1938, 2282, 2333, 2337
MspI	CCGG	4 cut(s)	531, 1568, 1580, 2397
MspR9I	CCNGG	8 cut(s)	766, 882, 958, 1039, 1568, 2069, 2192, 2398
MunI	CAATTG	1 cut(s)	693
Mva1269I	GAATGC	2 cut(s)	102, 1879
MvaI	CCWGG	6 cut(s)	766, 882, 958, 1039, 2069, 2192
MvnI	CGCG	1 cut(s)	64
MwoI	GCNNNNNNNGC	9 cut(s)	25, 59, 941, 1279, 1385, 1499, 1678, 1774, 1783
NaeI	GCCGGC	1 cut(s)	1581
NciI	CCSGG	2 cut(s)	1568, 2398
NdeI	CATATG	1 cut(s)	2353
NdeII	GATC	5 cut(s)	412, 1459, 1701, 1862, 2201
NgoMIV	GCCGGC	1 cut(s)	1579
NlaIV	GGNNCC	2 cut(s)	456, 876
NmuCI	GTSAC	4 cut(s)	993, 1244, 1562, 1663
NsiI	ATGCAT	2 cut(s)	475, 1695
NspI	RCATGY	4 cut(s)	315, 935, 2138, 2455
NspV	TTCGAA	2 cut(s)	187, 252
PacI	TTAATTAA	1 cut(s)	2337
PaeI	GCATGC	2 cut(s)	935, 2455
PagI	TCATGA	1 cut(s)	565
PciI	ACATGT	1 cut(s)	311
PcsI	WCGNNNNNNNCGW	2 cut(s)	1153, 2526
PctI	GAATGC	2 cut(s)	102, 1879
PdiI	GCCGGC	1 cut(s)	1581
PdmI	GAANNNNTTC	1 cut(s)	2145
PfeI	GAWTC	3 cut(s)	562, 815, 2384
PfoI	TCCNGGA	1 cut(s)	880
PkrI	GCNGC	5 cut(s)	52, 1390, 1495, 1799, 2359
PleI	GAGTC	3 cut(s)	511, 2021, 2385
PpsI	GAGTC	3 cut(s)	511, 2021, 2385
Ppu21I	YACGTR	2 cut(s)	851, 998
PpuMI	RGGWCCY	1 cut(s)	875
PscI	ACATGT	1 cut(s)	311
PshBI	ATTAAT	1 cut(s)	1317
PsiI	TTATAA	1 cut(s)	1481
Psp5II	RGGWCCY	1 cut(s)	875
Psp6I	CCWGG	6 cut(s)	764, 880, 956, 1037, 2067, 2190
PspEI	GGTNACC	1 cut(s)	1562
PspGI	CCWGG	6 cut(s)	764, 880, 956, 1037, 2067, 2190
PspN4I	GGNNCC	2 cut(s)	456, 876
PspPI	GGNCC	6 cut(s)	115, 286, 779, 875, 1751, 1805
PspPPI	RGGWCCY	1 cut(s)	875
PsuI	RGATCY	2 cut(s)	1862, 2201
RsaI	GTAC	1 cut(s)	2014
RsaNI	GTAC	1 cut(s)	2013
SaqAI	TTAA	9 cut(s)	810, 951, 1080, 1317, 1383, 1938, 2282, 2333, 2337
SatI	GCNGC	5 cut(s)	51, 1389, 1494, 1798, 2358
Sau3AI	GATC	5 cut(s)	412, 1459, 1701, 1862, 2201
Sau96I	GGNCC	6 cut(s)	115, 286, 779, 875, 1751, 1805
ScaI	AGTACT	1 cut(s)	2014
SchI	GAGTC	3 cut(s)	512, 2021, 2386
ScrFI	CCNGG	8 cut(s)	766, 882, 958, 1039, 1568, 2069, 2192, 2398
SduI	GDGCHC	3 cut(s)	1180, 1284, 1981
SfaNI	GCATC	7 cut(s)	739, 1366, 1529, 1668, 1702, 2192, 2464
SfcI	CTRYAG	1 cut(s)	165
SfuI	TTCGAA	2 cut(s)	187, 252
SinI	GGWCC	5 cut(s)	286, 779, 875, 1751, 1805
SmlI	CTYRAG	3 cut(s)	785, 1283, 1673
SmoI	CTYRAG	3 cut(s)	785, 1283, 1673
SphI	GCATGC	2 cut(s)	935, 2455
SsiI	CCGC	7 cut(s)	8, 100, 592, 688, 1234, 1273, 2418
SspI	AATATT	1 cut(s)	2094
SspMI	CTAG	7 cut(s)	971, 1059, 1110, 1364, 1605, 2172, 2303
StyD4I	CCNGG	8 cut(s)	764, 880, 956, 1037, 1566, 2067, 2190, 2396
StyI	CCWWGG	1 cut(s)	575
TaaI	ACNGT	8 cut(s)	203, 358, 1229, 1250, 1588, 1600, 1976, 2467
TaiI	ACGT	5 cut(s)	216, 853, 1000, 2077, 2532
TaqI	TCGA	9 cut(s)	187, 252, 428, 443, 1156, 1197, 1421, 1635, 2345
TaqII	GACCGA	1 cut(s)	830
TatI	WGTACW	1 cut(s)	2012
TfiI	GAWTC	3 cut(s)	562, 815, 2384
Tru1I	TTAA	9 cut(s)	810, 951, 1080, 1317, 1383, 1938, 2282, 2333, 2337
Tru9I	TTAA	9 cut(s)	810, 951, 1080, 1317, 1383, 1938, 2282, 2333, 2337
TscAI	CASTG	7 cut(s)	296, 486, 972, 1025, 1668, 2374, 2470
TseFI	GTSAC	4 cut(s)	993, 1244, 1562, 1663
TseI	GCWGC	5 cut(s)	50, 1388, 1493, 1797, 2357
Tsp45I	GTSAC	4 cut(s)	993, 1244, 1562, 1663
TspRI	CASTG	7 cut(s)	296, 486, 972, 1025, 1668, 2374, 2470
VneI	GTGCAC	1 cut(s)	1977
VpaK11BI	GGWCC	5 cut(s)	286, 779, 875, 1751, 1805
VspI	ATTAAT	1 cut(s)	1317
XagI	CCTNNNNNAGG	1 cut(s)	869
XapI	RAATTY	5 cut(s)	1010, 1610, 1709, 1889, 2143
XceI	RCATGY	4 cut(s)	315, 935, 2138, 2455
XmiI	GTMKAC	3 cut(s)	1595, 1986, 2025
XmnI	GAANNNNTTC	1 cut(s)	2145
XspI	CTAG	7 cut(s)	971, 1059, 1110, 1364, 1605, 2172, 2303
ZrmI	AGTACT	1 cut(s)	2014
Zsp2I	ATGCAT	2 cut(s)	475, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.