Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003781

Physical Location & Seq

Genomic Coordinates Forward (+)

15065326 .. 15077951

Gene Structure 12626 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g11281.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGACTGTGGAGATGATAAACAAGGGAGAAGCTCCCTGCAAAGCCCATTTCGACAAGATAGTTCTGAGTTGGGACTTCTTCCGCATTATCCAGGAGGCCGACAAACGAAACAAGCAAAAGGAAAAGGTCGATGAAGGTGAGACGAAACGTAACGTCGAGGACAGTTACGCGAACGTGGACGACTATATCTCTACATACGTGCCTCTTCTTTTCGAAGAAATCAAAGCTGAGATTGCTTCCAACAAGGAGCAGTGGGGAGCAGGCAAGACCACTTGTGTGACGGAATGTGAAGAAACTGATGGGTTTCACAGGGTTACTGTTTGTGTTGACTTGGATGAGGGCGAGGACGAACAAACAAGAGTCAAGGTTGATGATCTTTTTCTACTCTCCAAACCACAGTGGTCCTCCAAACCAACGGTTCCGGAGGAGAATTCTTATAACAAATATGCATTTGCATTGGTGGAAAGTAGAAACAAACAAGAGATAAAGCTCAGAATGTATTTGGCCGGAGAGGTCAGAGATTTGAATGCAGATGCAATTCATTATTCTCCAAGGCTCCAACAAGTGCGGTTATTGATTACTTCTACTGCCGATGGAGACAGGCTCTTTGACGTTACTAAGATTTGCAGTTTATCTACTACCGCTCATGAATATACAGCCTTGCGGTCGATTGGTTCTCTCCCTTTTATGGATTTGATACTTGCACCTTCTGAGAAAAATCTTGAGGCAGAAGGTCAAGCCTGGAAAGTTTCTGGGCCTCTTGAGGAATATATAAAAGACAATCTTAATGAATCTCAACAAAAGGCCATACAGGCCGGTCTATCACGTAAACCATTTATCCTGATACAGGGTCCTCCAGGAACAGGAAAGACGCAGACTATCCTTGCGCTCCTTAGTGCCATTCTGCATGCTACTCCTGCAAAAGTAAAAGCCAGGGTTTCACTGCTAGACATAAAGCAAGAGCCAAAGTTATCTATTCAGGAGAAATTAAATCATTGGCGACTAGCGTCTCCCTGGCTTAGTGGTAGCAATCCTAGAGAGAAAACAATGCCTGTTAATGGCGATGACGGTTTTTTTCCAACCACCGGAAATGAGTTAAAACCAGAAGTAGTCAGTTCTACTCGTAAATATCGTGTACGTGTCCTTGTGTGTGCTCCTTCAAACTCTGCACTCGATGAGATTGTATTGCGTGTTATGAACAATGGTGTGCGGGATGAAAGTGACCGTTCATATAGTCCCAAAATTGTGCGGATTGGGATCAAGGAACATCATTCTATCCGAGCTGTCTCCATTGATGAGCTGATACGCAGAAAGAAAGGAAGCATGGGGGGTGCTAAACAAGATGGTGATGTTGGTGCACTTAAGGCTGCAATTTTGGAGGAGGCCGTCATTGTTTTTTCGACCCTCAGTAGCAGCAGTATTTTATCCCATTCCAGTAAATCGGATAGTGGTTTTGATGTTGTTATAATAGATGAAGCTGCACAGGCTGTTGAACCAGCAACCCTTCTTCCATTGGCGACTGGATGCAAACAAGTATTTCTGATAGGTGACCCGGTTCAACTGCCCGCTACTGTAAAGTCTAGCATTGCTGAGAAATTTGGGTACGGAAGGAGTATGTTTGAGAGATTTCAGAGGGCTGGATATCCAGTGACCATGCTCAAGATGCAGTACCGTATGCATCCAGAGATCCGAAGCTTTCCTTCTGAAGAGTTTTATGCAGACTCATTAGAAGATGGTCCTAATATCAAAGAGCAGACAAAGCGTTCATGGCATGAGTTTAGCTGCTTTGGACCATTTTGCTTCTTTGACTTGCATGAAGGGAAAGAAGCCAAGCCTCAGGGAAGTGGATCTTGGGTGAATGCAGATGAGGTTGAATTTGTCTTGAACTTGTATCACAAGTTGGTGAGCCGGTATCCGGAGCTTAAATCGAGTAATAATTTTGCAATTATATCTACTTACCGTGCACAAGTAGAGCTCTTGAAAGAACGTTTCAAAAGTACTTTCGGAGTAGACTCTGAGAAAGAAGTGGAAATCACTACTGTTGATGGCTGCCAGGGACGTGAAAAGGATGTTGCAATATTTTCTTGTGTCAGGGCAAGCAAGGAAGGAGGAATTGGGTTTGTGGAAGATTTTCGGCGAATGAATGTTGGGATTACTAGAGCAAAAGCATCTATCCTGGTGGTTGGATCTGCGTCAACATTGAAGAGGAGTGGAATCCATTGGAATAACCTAGTGGAAAATGCTGAAAAGAGACAATGCTTAATTAAGGTCTTGAAACCATATACTGCGTTTTTCAGTGATCAGAGTCTGGAATCTATGAGAACCAAGGAAGAAATCAAGCCAAGCGAGGAAATTCAAAATGATGAATTAGATTACAGCATGCCTACTTACACTGCTGGGGATGCTGATGAAGTCCAGGGAGATGATAATGGCTATGGTGACGGGGATGAGATGGACGTGGATGATGGAGGTTTTGGAGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006935 GO:0007154 GO:0007275 GO:0008150 GO:0009553 GO:0009605 GO:0009856 GO:0009875 GO:0009987 GO:0010183 GO:0022414 GO:0032501 GO:0032502 GO:0040011 GO:0042221 GO:0042330 GO:0044706 GO:0048229 GO:0048856 GO:0048868 GO:0050896 GO:0050918 GO:0051704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_11 AAA_12

Protein Analysis

829

Amino Acids

92.53

Weight (kDa)

5.29

Isoelectric Point (pI)

41.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_11	PF13086	261 - 439	1.6e-25	AAA domain
AAA_11	PF13086	454 - 527	6.1e-25	AAA domain
AAA_12	PF13087	535 - 731	2.9e-63	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15570 AT4G15570 AT4G15570 AT4G15570
fragaria_vesca	FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_4g11281 FvH4_4g11281 FvH4_4g11281 FvH4_4g11281
malus_domestica	MD15G1420100.v1.1 MD15G1420400.v1.1
prunus_persica	Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1
pyrus_communis	pycom15g37290
rosa_chinensis	RchiOBHm_Chr4g0407481
rosa_laevigata	RLG00000008716
rosa_multiflora	Rmu_sc0004841.1_g000016
rosa_roxburghii	Rroxscaffold_5G00352130
rosa_rugosa	Rorug04G0080000
rosa_samantha	Rh4AG144700 Rh4BG142600 Rh4CG151400 Rh4DG138600
rosa_wichuraiana	Rw4G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	438, 1466
AccBSI	CCGCTC	1 cut(s)	644
AccI	GTMKAC	1 cut(s)	2010
AccII	CGCG	1 cut(s)	170
AccIII	TCCGGA	2 cut(s)	421, 1915
AciI	CCGC	7 cut(s)	82, 568, 642, 664, 1210, 1249, 1566
AclI	AACGTT	1 cut(s)	1987
AclWI	GGATC	4 cut(s)	1265, 1681, 1855, 2194
AcoI	YGGCCR	1 cut(s)	504
AcsI	RAATTY	4 cut(s)	430, 1595, 1874, 2352
AcuI	CTGAAG	1 cut(s)	1725
AfaI	GTAC	4 cut(s)	1137, 1604, 1670, 1999
AfiI	CCNNNNNNNGG	6 cut(s)	688, 847, 863, 1058, 1085, 1915
AflII	CTTAAG	1 cut(s)	1361
AflIII	ACRYGT	1 cut(s)	1138
AjiI	CACGTC	2 cut(s)	2060, 2458
AjnI	CCWGG	8 cut(s)	90, 740, 856, 932, 1013, 2052, 2175, 2415
AjuI	GAANNNNNNNTTGG	4 cut(s)	1834, 1866, 2097, 2129
AleI	CACNNNNGTG	1 cut(s)	275
Alw21I	GWGCWC	4 cut(s)	1156, 1360, 1966, 1977
Alw26I	GTCTC	5 cut(s)	134, 591, 1014, 1291, 2245
Alw44I	GTGCAC	2 cut(s)	1356, 1962
AlwI	GGATC	4 cut(s)	1265, 1681, 1855, 2194
AlwNI	CAGNNNCTG	1 cut(s)	2308
Aor13HI	TCCGGA	2 cut(s)	421, 1915
AoxI	GGCC	6 cut(s)	96, 504, 755, 804, 813, 1383
ApaLI	GTGCAC	2 cut(s)	1356, 1962
ApeKI	GCWGC	5 cut(s)	1367, 1413, 1478, 1782, 2049
ApoI	RAATTY	4 cut(s)	430, 1595, 1874, 2352
ArsI	GACNNNNNNTTYG	2 cut(s)	590, 622
Asp700I	GAANNNNTTC	1 cut(s)	2130
AspLEI	GCGC	1 cut(s)	889
AspS9I	GGNCC	5 cut(s)	402, 755, 851, 1736, 1790
AsuC2I	CCSGG	1 cut(s)	1553
AsuHPI	GGTGA	6 cut(s)	149, 1358, 1559, 1867, 1915, 2450
AsuII	TTCGAA	1 cut(s)	213
AvaII	GGWCC	4 cut(s)	402, 851, 1736, 1790
AxyI	CCTNAGG	1 cut(s)	1836
BaeGI	GKGCMC	2 cut(s)	1360, 1966
BanII	GRGCYC	1 cut(s)	1977
Bbv12I	GWGCWC	4 cut(s)	1156, 1360, 1966, 1977
BbvI	GCAGC	5 cut(s)	1354, 1425, 1465, 1769, 2036
BccI	CCATC	7 cut(s)	293, 587, 1337, 1727, 2039, 2446, 2459
BceAI	ACGGC	1 cut(s)	1370
BciT130I	CCWGG	8 cut(s)	92, 742, 858, 934, 1015, 2054, 2177, 2417
BciVI	GTATCC	1 cut(s)	1923
BclI	TGATCA	1 cut(s)	2299
BcnI	CCSGG	1 cut(s)	1553
BcoDI	GTCTC	5 cut(s)	134, 591, 1014, 1291, 2245
BfaI	CTAG	6 cut(s)	947, 1004, 1035, 1581, 2157, 2231
BfrI	CTTAAG	1 cut(s)	1361
BfuI	GTATCC	1 cut(s)	1923
BglI	GCCNNNNNGGC	1 cut(s)	812
BisI	GCNGC	5 cut(s)	1368, 1414, 1479, 1783, 2050
BlsI	GCNGC	5 cut(s)	1369, 1415, 1480, 1784, 2051
BmcAI	AGTACT	1 cut(s)	1999
Bme1390I	CCNGG	9 cut(s)	92, 742, 858, 934, 1015, 1553, 2054, 2177, 2417
Bme18I	GGWCC	4 cut(s)	402, 851, 1736, 1790
BmgBI	CACGTC	2 cut(s)	2060, 2458
BmgT120I	GGNCC	5 cut(s)	402, 755, 851, 1736, 1790
BmiI	GGNNCC	3 cut(s)	420, 557, 852
BmrFI	CCNGG	9 cut(s)	92, 742, 858, 934, 1015, 1553, 2054, 2177, 2417
BmsI	GCATC	6 cut(s)	523, 1514, 1653, 1687, 2177, 2392
BoxI	GACNNNNGTC	1 cut(s)	1006
BplI	GAGNNNNNCTC	2 cut(s)	588, 620
BpmI	CTGGAG	1 cut(s)	840
Bpu14I	TTCGAA	1 cut(s)	213
BpuEI	CTTGAG	3 cut(s)	743, 782, 1643
BpuMI	CCSGG	1 cut(s)	1553
BsaAI	YACGTR	3 cut(s)	199, 827, 1139
BsaBI	GATNNNNATC	1 cut(s)	1256
BsaJI	CCNNGG	6 cut(s)	551, 933, 1013, 2053, 2325, 2416
BsaWI	WCCGGW	3 cut(s)	421, 1085, 1915
Bsc4I	CCNNNNNNNGG	6 cut(s)	688, 847, 863, 1058, 1085, 1915
Bse118I	RCCGGY	2 cut(s)	815, 1908
Bse1I	ACTGG	3 cut(s)	1434, 1525, 1646
Bse21I	CCTNAGG	1 cut(s)	1836
Bse3DI	GCAATG	1 cut(s)	1584
Bse8I	GATNNNNATC	1 cut(s)	1256
BseAI	TCCGGA	2 cut(s)	421, 1915
BseBI	CCWGG	8 cut(s)	92, 742, 858, 934, 1015, 2054, 2177, 2417
BseDI	CCNNGG	6 cut(s)	551, 933, 1013, 2053, 2325, 2416
BseGI	GGATG	8 cut(s)	340, 1219, 1529, 1678, 2074, 2407, 2452, 2467
BseJI	GATNNNNATC	1 cut(s)	1256
BseLI	CCNNNNNNNGG	6 cut(s)	688, 847, 863, 1058, 1085, 1915
BseMI	GCAATG	1 cut(s)	1584
BseMII	CTCAG	8 cut(s)	56, 219, 505, 702, 1420, 1581, 1850, 2007
BseNI	ACTGG	3 cut(s)	1434, 1525, 1646
BseRI	GAGGAG	3 cut(s)	440, 1394, 2221
BseSI	GKGCMC	2 cut(s)	1360, 1966
BseXI	GCAGC	5 cut(s)	1354, 1425, 1465, 1769, 2036
BseYI	CCCAGC	1 cut(s)	2396
BsgI	GTGCAG	2 cut(s)	1152, 1464
Bsh1236I	CGCG	1 cut(s)	170
Bsh1285I	CGRYCG	1 cut(s)	668
BshFI	GGCC	6 cut(s)	98, 506, 757, 806, 815, 1385
BsiEI	CGRYCG	1 cut(s)	668
BsiHKAI	GWGCWC	4 cut(s)	1156, 1360, 1966, 1977
BsiSI	CCGG	7 cut(s)	422, 507, 816, 1086, 1553, 1909, 1916
BslFI	GGGAC	3 cut(s)	86, 1221, 2070
BslI	CCNNNNNNNGG	6 cut(s)	688, 847, 863, 1058, 1085, 1915
BsmAI	GTCTC	5 cut(s)	134, 591, 1014, 1291, 2245
BsmBI	CGTCTC	2 cut(s)	134, 1014
BsmFI	GGGAC	3 cut(s)	86, 1221, 2070
BsmI	GAATGC	2 cut(s)	532, 1864
BsnI	GGCC	6 cut(s)	98, 506, 757, 806, 815, 1385
Bsp119I	TTCGAA	1 cut(s)	213
Bsp1286I	GDGCHC	4 cut(s)	1156, 1360, 1966, 1977
Bsp13I	TCCGGA	2 cut(s)	421, 1915
Bsp143I	GATC	6 cut(s)	373, 1257, 1686, 1847, 2186, 2299
BspACI	CCGC	7 cut(s)	82, 568, 642, 664, 1210, 1249, 1566
BspANI	GGCC	6 cut(s)	98, 506, 757, 806, 815, 1385
BspCNI	CTCAG	8 cut(s)	57, 220, 504, 703, 1419, 1582, 1849, 2008
BspEI	TCCGGA	2 cut(s)	421, 1915
BspFNI	CGCG	1 cut(s)	170
BspHI	TCATGA	1 cut(s)	646
BspLI	GGNNCC	3 cut(s)	420, 557, 852
BspPI	GGATC	4 cut(s)	1265, 1681, 1855, 2194
BspT104I	TTCGAA	1 cut(s)	213
BspTI	CTTAAG	1 cut(s)	1361
BsrBI	CCGCTC	1 cut(s)	644
BsrDI	GCAATG	1 cut(s)	1584
BsrFI	RCCGGY	2 cut(s)	815, 1908
BsrI	ACTGG	3 cut(s)	1434, 1525, 1646
BssAI	RCCGGY	2 cut(s)	815, 1908
BssECI	CCNNGG	6 cut(s)	551, 933, 1013, 2053, 2325, 2416
BssMI	GATC	6 cut(s)	373, 1257, 1686, 1847, 2186, 2299
BssT1I	CCWWGG	2 cut(s)	551, 2325
Bst2UI	CCWGG	8 cut(s)	92, 742, 858, 934, 1015, 2054, 2177, 2417
Bst6I	CTCTTC	3 cut(s)	210, 1701, 2198
BstAFI	CTTAAG	1 cut(s)	1361
BstBAI	YACGTR	3 cut(s)	199, 827, 1139
BstBI	TTCGAA	1 cut(s)	213
BstC8I	GCNNGC	5 cut(s)	262, 909, 1566, 2098, 2381
BstEII	GGTNACC	1 cut(s)	1547
BstENI	CCTNNNNNAGG	1 cut(s)	845
BstF5I	GGATG	8 cut(s)	340, 1219, 1529, 1678, 2074, 2407, 2452, 2467
BstFNI	CGCG	1 cut(s)	170
BstHHI	GCGC	1 cut(s)	889
BstKTI	GATC	6 cut(s)	376, 1260, 1689, 1850, 2189, 2302
BstMAI	GTCTC	5 cut(s)	134, 591, 1014, 1291, 2245
BstMBI	GATC	6 cut(s)	373, 1257, 1686, 1847, 2186, 2299
BstMCI	CGRYCG	1 cut(s)	668
BstMWI	GCNNNNNNNGC	9 cut(s)	233, 812, 917, 1364, 1484, 1663, 1759, 1768, 2402
BstNI	CCWGG	8 cut(s)	92, 742, 858, 934, 1015, 2054, 2177, 2417
BstNSI	RCATGY	2 cut(s)	911, 2383
BstPAI	GACNNNNGTC	1 cut(s)	1006
BstPI	GGTNACC	1 cut(s)	1547
BstSCI	CCNGG	9 cut(s)	90, 740, 856, 932, 1013, 1551, 2052, 2175, 2415
BstSLI	GKGCMC	2 cut(s)	1360, 1966
BstUI	CGCG	1 cut(s)	170
BstV1I	GCAGC	5 cut(s)	1354, 1425, 1465, 1769, 2036
BstX2I	RGATCY	3 cut(s)	1686, 1847, 2186
BstYI	RGATCY	3 cut(s)	1686, 1847, 2186
Bsu36I	CCTNAGG	1 cut(s)	1836
BsuI	GTATCC	1 cut(s)	1923
BsuRI	GGCC	6 cut(s)	98, 506, 757, 806, 815, 1385
BtgZI	GCGATG	1 cut(s)	1077
BtrI	CACGTC	2 cut(s)	2060, 2458
BtsCI	GGATG	8 cut(s)	340, 1219, 1529, 1678, 2074, 2407, 2452, 2467
BtsI	GCAGTG	3 cut(s)	257, 941, 2391
BtsIMutI	CAGTG	6 cut(s)	257, 404, 941, 1653, 2302, 2391
Cac8I	GCNNGC	5 cut(s)	262, 909, 1566, 2098, 2381
CaiI	CAGNNNCTG	1 cut(s)	2308
CciI	TCATGA	1 cut(s)	646
CfoI	GCGC	1 cut(s)	889
Cfr10I	RCCGGY	2 cut(s)	815, 1908
Cfr13I	GGNCC	5 cut(s)	402, 755, 851, 1736, 1790
CseI	GACGC	3 cut(s)	880, 996, 2181
Csp6I	GTAC	4 cut(s)	1136, 1603, 1669, 1998
CviAII	CATG	8 cut(s)	647, 908, 1324, 1654, 1767, 1772, 1814, 2380
CviQI	GTAC	4 cut(s)	1136, 1603, 1669, 1998
DpnI	GATC	6 cut(s)	375, 1259, 1688, 1849, 2188, 2301
DpnII	GATC	6 cut(s)	373, 1257, 1686, 1847, 2186, 2299
EaeI	YGGCCR	1 cut(s)	504
Eam1104I	CTCTTC	3 cut(s)	210, 1701, 2198
EarI	CTCTTC	3 cut(s)	210, 1701, 2198
Ecl136II	GAGCTC	1 cut(s)	1975
Eco130I	CCWWGG	2 cut(s)	551, 2325
Eco24I	GRGCYC	1 cut(s)	1977
Eco32I	GATATC	1 cut(s)	1643
Eco47I	GGWCC	4 cut(s)	402, 851, 1736, 1790
Eco53kI	GAGCTC	1 cut(s)	1975
Eco57I	CTGAAG	1 cut(s)	1725
Eco81I	CCTNAGG	1 cut(s)	1836
Eco91I	GGTNACC	1 cut(s)	1547
EcoICRI	GAGCTC	1 cut(s)	1975
EcoNI	CCTNNNNNAGG	1 cut(s)	845
EcoO109I	RGGNCCY	1 cut(s)	851
EcoO65I	GGTNACC	1 cut(s)	1547
EcoRI	GAATTC	1 cut(s)	430
EcoRII	CCWGG	8 cut(s)	90, 740, 856, 932, 1013, 2052, 2175, 2415
EcoRV	GATATC	1 cut(s)	1643
EcoT14I	CCWWGG	2 cut(s)	551, 2325
EcoT22I	ATGCAT	2 cut(s)	451, 1680
EcoT38I	GRGCYC	1 cut(s)	1977
ErhI	CCWWGG	2 cut(s)	551, 2325
Esp3I	CGTCTC	2 cut(s)	134, 1014
FaeI	CATG	8 cut(s)	650, 911, 1327, 1657, 1770, 1775, 1817, 2383
FalI	AAGNNNNNCTT	6 cut(s)	768, 800, 1684, 1716, 1834, 1866
FaqI	GGGAC	3 cut(s)	86, 1221, 2070
FatI	CATG	8 cut(s)	646, 907, 1323, 1653, 1766, 1771, 1813, 2379
FauI	CCCGC	2 cut(s)	1203, 1573
FbaI	TGATCA	1 cut(s)	2299
FblI	GTMKAC	1 cut(s)	2010
Fnu4HI	GCNGC	5 cut(s)	1368, 1414, 1479, 1783, 2050
FokI	GGATG	8 cut(s)	347, 1226, 1536, 1665, 2081, 2414, 2459, 2474
FriOI	GRGCYC	1 cut(s)	1977
Fsp4HI	GCNGC	5 cut(s)	1368, 1414, 1479, 1783, 2050
FspBI	CTAG	6 cut(s)	947, 1004, 1035, 1581, 2157, 2231
GlaI	GCGC	1 cut(s)	888
GluI	GCNGC	5 cut(s)	1368, 1414, 1479, 1783, 2050
GsaI	CCCAGC	1 cut(s)	2400
GsuI	CTGGAG	1 cut(s)	840
HaeIII	GGCC	6 cut(s)	98, 506, 757, 806, 815, 1385
HapII	CCGG	7 cut(s)	422, 507, 816, 1086, 1553, 1909, 1916
HgaI	GACGC	3 cut(s)	880, 996, 2181
HhaI	GCGC	1 cut(s)	889
Hin1II	CATG	8 cut(s)	650, 911, 1327, 1657, 1770, 1775, 1817, 2383
Hin6I	GCGC	1 cut(s)	887
HinP1I	GCGC	1 cut(s)	887
HincII	GTYRAC	2 cut(s)	328, 2196
HindII	GTYRAC	2 cut(s)	328, 2196
HindIII	AAGCTT	1 cut(s)	1693
HinfI	GANTC	7 cut(s)	360, 791, 1721, 2012, 2214, 2305, 2312
HpaII	CCGG	7 cut(s)	422, 507, 816, 1086, 1553, 1909, 1916
HphI	GGTGA	6 cut(s)	149, 1358, 1559, 1867, 1915, 2450
Hpy166II	GTNNAC	8 cut(s)	178, 328, 830, 1136, 1358, 1964, 2011, 2196
Hpy8I	GTNNAC	8 cut(s)	178, 328, 830, 1136, 1358, 1964, 2011, 2196
Hpy99I	CGWCG	1 cut(s)	158
HpyAV	CCTTC	9 cut(s)	128, 717, 725, 1167, 1514, 1602, 1710, 1811, 2099
HpyF10VI	GCNNNNNNNGC	9 cut(s)	233, 812, 917, 1364, 1484, 1663, 1759, 1768, 2402
Hsp92II	CATG	8 cut(s)	650, 911, 1327, 1657, 1770, 1775, 1817, 2383
HspAI	GCGC	1 cut(s)	887
Kpn2I	TCCGGA	2 cut(s)	421, 1915
Ksp22I	TGATCA	1 cut(s)	2299
Kzo9I	GATC	6 cut(s)	373, 1257, 1686, 1847, 2186, 2299
LmnI	GCTCC	7 cut(s)	37, 247, 257, 561, 894, 1159, 1918
Lsp1109I	GCAGC	5 cut(s)	1354, 1425, 1465, 1769, 2036
LweI	GCATC	6 cut(s)	523, 1514, 1653, 1687, 2177, 2392
MaeI	CTAG	6 cut(s)	947, 1004, 1035, 1581, 2157, 2231
MaeIII	GTNAC	9 cut(s)	149, 164, 277, 313, 613, 1220, 1547, 1648, 2438
MalI	GATC	6 cut(s)	375, 1259, 1688, 1849, 2188, 2301
MbiI	CCGCTC	1 cut(s)	644
MboI	GATC	6 cut(s)	373, 1257, 1686, 1847, 2186, 2299
MflI	RGATCY	3 cut(s)	1686, 1847, 2186
MhlI	GDGCHC	4 cut(s)	1156, 1360, 1966, 1977
MlyI	GAGTC	4 cut(s)	369, 1715, 2006, 2314
MmeI	TCCRAC	4 cut(s)	264, 583, 1103, 2164
Mph1103I	ATGCAT	2 cut(s)	451, 1680
MroI	TCCGGA	2 cut(s)	421, 1915
MroXI	GAANNNNTTC	1 cut(s)	2130
MseI	TTAA	8 cut(s)	786, 989, 1056, 1097, 1362, 1923, 2261, 2265
MslI	CAYNNNNRTG	1 cut(s)	275
MspCI	CTTAAG	1 cut(s)	1361
MspI	CCGG	7 cut(s)	422, 507, 816, 1086, 1553, 1909, 1916
MspR9I	CCNGG	9 cut(s)	92, 742, 858, 934, 1015, 1553, 2054, 2177, 2417
Mva1269I	GAATGC	2 cut(s)	532, 1864
MvaI	CCWGG	8 cut(s)	92, 742, 858, 934, 1015, 2054, 2177, 2417
MvnI	CGCG	1 cut(s)	170
MwoI	GCNNNNNNNGC	9 cut(s)	233, 812, 917, 1364, 1484, 1663, 1759, 1768, 2402
NciI	CCSGG	1 cut(s)	1553
NdeII	GATC	6 cut(s)	373, 1257, 1686, 1847, 2186, 2299
NlaIII	CATG	8 cut(s)	650, 911, 1327, 1657, 1770, 1775, 1817, 2383
NlaIV	GGNNCC	3 cut(s)	420, 557, 852
NmuCI	GTSAC	5 cut(s)	277, 1220, 1547, 1648, 2438
NsiI	ATGCAT	2 cut(s)	451, 1680
NspI	RCATGY	2 cut(s)	911, 2383
NspV	TTCGAA	1 cut(s)	213
OliI	CACNNNNGTG	1 cut(s)	275
PacI	TTAATTAA	1 cut(s)	2265
PaeI	GCATGC	2 cut(s)	911, 2383
PagI	TCATGA	1 cut(s)	646
PcsI	WCGNNNNNNNCGW	1 cut(s)	1129
PctI	GAATGC	2 cut(s)	532, 1864
PdmI	GAANNNNTTC	1 cut(s)	2130
PfeI	GAWTC	3 cut(s)	791, 2214, 2312
PfoI	TCCNGGA	2 cut(s)	90, 856
PkrI	GCNGC	5 cut(s)	1369, 1415, 1480, 1784, 2051
PleI	GAGTC	4 cut(s)	368, 1715, 2006, 2313
PpsI	GAGTC	4 cut(s)	368, 1715, 2006, 2313
Ppu21I	YACGTR	3 cut(s)	199, 827, 1139
PpuMI	RGGWCCY	1 cut(s)	851
PshAI	GACNNNNGTC	1 cut(s)	1006
PsiI	TTATAA	2 cut(s)	438, 1466
Psp124BI	GAGCTC	1 cut(s)	1977
Psp1406I	AACGTT	1 cut(s)	1987
Psp5II	RGGWCCY	1 cut(s)	851
Psp6I	CCWGG	8 cut(s)	90, 740, 856, 932, 1013, 2052, 2175, 2415
PspEI	GGTNACC	1 cut(s)	1547
PspFI	CCCAGC	1 cut(s)	2396
PspGI	CCWGG	8 cut(s)	90, 740, 856, 932, 1013, 2052, 2175, 2415
PspN4I	GGNNCC	3 cut(s)	420, 557, 852
PspPI	GGNCC	5 cut(s)	402, 755, 851, 1736, 1790
PspPPI	RGGWCCY	1 cut(s)	851
PstNI	CAGNNNCTG	1 cut(s)	2308
PsuI	RGATCY	3 cut(s)	1686, 1847, 2186
RsaI	GTAC	4 cut(s)	1137, 1604, 1670, 1999
RsaNI	GTAC	4 cut(s)	1136, 1603, 1669, 1998
RseI	CAYNNNNRTG	1 cut(s)	275
SacI	GAGCTC	1 cut(s)	1977
SaqAI	TTAA	8 cut(s)	786, 989, 1056, 1097, 1362, 1923, 2261, 2265
SatI	GCNGC	5 cut(s)	1368, 1414, 1479, 1783, 2050
Sau3AI	GATC	6 cut(s)	373, 1257, 1686, 1847, 2186, 2299
Sau96I	GGNCC	5 cut(s)	402, 755, 851, 1736, 1790
ScaI	AGTACT	1 cut(s)	1999
SchI	GAGTC	4 cut(s)	369, 1715, 2006, 2314
ScrFI	CCNGG	9 cut(s)	92, 742, 858, 934, 1015, 1553, 2054, 2177, 2417
SduI	GDGCHC	4 cut(s)	1156, 1360, 1966, 1977
SfaNI	GCATC	6 cut(s)	523, 1514, 1653, 1687, 2177, 2392
SfiI	GGCCNNNNNGGCC	1 cut(s)	812
SfuI	TTCGAA	1 cut(s)	213
SinI	GGWCC	4 cut(s)	402, 851, 1736, 1790
SmiMI	CAYNNNNRTG	1 cut(s)	275
SmlI	CTYRAG	4 cut(s)	722, 761, 1361, 1658
SmoI	CTYRAG	4 cut(s)	722, 761, 1361, 1658
SphI	GCATGC	2 cut(s)	911, 2383
SsiI	CCGC	7 cut(s)	82, 568, 642, 664, 1210, 1249, 1566
SspI	AATATT	1 cut(s)	2079
SspMI	CTAG	6 cut(s)	947, 1004, 1035, 1581, 2157, 2231
SstI	GAGCTC	1 cut(s)	1977
StyD4I	CCNGG	9 cut(s)	90, 740, 856, 932, 1013, 1551, 2052, 2175, 2415
StyI	CCWWGG	2 cut(s)	551, 2325
TaqI	TCGA	8 cut(s)	51, 129, 156, 213, 668, 1173, 1400, 1928
TatI	WGTACW	1 cut(s)	1997
TfiI	GAWTC	3 cut(s)	791, 2214, 2312
Tru1I	TTAA	8 cut(s)	786, 989, 1056, 1097, 1362, 1923, 2261, 2265
Tru9I	TTAA	8 cut(s)	786, 989, 1056, 1097, 1362, 1923, 2261, 2265
TscAI	CASTG	6 cut(s)	257, 404, 948, 1653, 2302, 2398
TseFI	GTSAC	5 cut(s)	277, 1220, 1547, 1648, 2438
TseI	GCWGC	5 cut(s)	1367, 1413, 1478, 1782, 2049
Tsp45I	GTSAC	5 cut(s)	277, 1220, 1547, 1648, 2438
TspGWI	ACGGA	2 cut(s)	296, 1620
TspRI	CASTG	6 cut(s)	257, 404, 948, 1653, 2302, 2398
Vha464I	CTTAAG	1 cut(s)	1361
VneI	GTGCAC	2 cut(s)	1356, 1962
VpaK11BI	GGWCC	4 cut(s)	402, 851, 1736, 1790
XagI	CCTNNNNNAGG	1 cut(s)	845
XapI	RAATTY	4 cut(s)	430, 1595, 1874, 2352
XceI	RCATGY	2 cut(s)	911, 2383
XmiI	GTMKAC	1 cut(s)	2010
XmnI	GAANNNNTTC	1 cut(s)	2130
XspI	CTAG	6 cut(s)	947, 1004, 1035, 1581, 2157, 2231
ZrmI	AGTACT	1 cut(s)	1999
Zsp2I	ATGCAT	2 cut(s)	451, 1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.