Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004841.1

Orthogroup ID

OG0003781

Physical Location & Seq

Genomic Coordinates Reverse (-)

68982 .. 80823

Gene Structure 11842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004841.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

atgggagacaatctagtgggctatgggcccaagtcgtcttggacttgggtaggaactgcaatgggtggacaagagctgctgtttttgggtccccacagttttggatctgaatttgggatccgggtggcaaatggttttggatctgggatctgggtggatgttggggttgcactgcaacccattatcttctgtgggctgtttgtttttctcattggaatggggttcttgtgctttactggtgggagagtgccttcattctggcgccaggttgatttttatcaacttgcgcgttggagttcgatgggtagtcaaaccaccgactactcaattcactacacggctgcaatccgtagtgtaaaatcagcgctgcgtttcgacaccgctggtcctccaggaacaggaaagacacagactatccttgcgcttcttagtgccattctgcatgctactcctgcaagagtaaaagccagggttgcactgctagacataaagcatcagcagaagttatctattcaggagaaattcaatcattggcaactagcgtctccctggcttagtggtagcaaccctagagagaaaacaatgcctgttaatggcgatgatggtttttttccaaccactggaaatgagttaaaaccagaagtagtcagttctacccgtaaatatcgtgtacgtgtccttgtctgtgctccttcaaactctgcactcgatgagattgtattgcgtgttatgaacaatggtgtgcgggatgaaagtgaccgttcatatagtcccaaaattgtgcggattggggtcaaggaacatcattctatccgatctgtctccataaatgagctggtacaaagaaagaaaggaagcatggggggtgctaaactagatggaggtgatgaagcacttcgagctgtaattttggaggaggccgtaattgtcttctcgaccctcagtagcagtggttcagcccattttggtaaatttgatcgtggttttgatgttcttataatagatgaagctgcacaggctgttgaacctgcgactcttgttccattggcgaatggatgcaaacaagtatttctgataggtgaccctgttcaactgcccgctactgtaaagtctcccattgctgtgaaatttgggtatggaaggagtatgttcgagagatttcagcgggctggatatccagtgaccatgctgaagatgcagtatcgtatgcatccagagatcagaagctttccttctggagagttttatgcagactcattagaagatggtcctaatatcagagagcagacaaagcgttcatggcatgagtatagctgctttggaccattttgcttctttgacttgcatgaagggaaatcagtcaagcctcaggcaagtggatcttgggtgaatgctgatgaggttgaatttgtcttgaacttgtatcacaagttggtgagccgatatccagagcttaaatctagtaatcattttgcaattataactacttaccgtgcacaagcagatctcttgaaagaacgtttcaaaagtactttcggagtggactctgagaaagaagtggaaatcactactgttgatggttgccagggacgtgaaaaggctgttgcaatattttcttgtgtcagggcaagcaaggaaggaggaattgggtttgtggaagattttcggcgaatgaatgttgcgattactagagcaaaagcatctatcctggtggttggatctgcatcaacattgaggaggagtcatagccattggaataacctagtggaaagcgctgaaaagagacaatgcttaattaaggtttcgaagccatataccgcatttttcagtgatgagagtctggaatctatgagaaccaaagaagaaatcatgccaagcgaggaagttcaaaatgatgaattagattacagcatgcctacctacactgttggggatgccgatgaagtgctgggagatgacaatggctatggtgacggggacgagatggacatggatgatggaggggatggaccagatcagatcgatctagaaggctcgggctctgacccgcgacgcgaccctaaaacgagattaggccggaactcctccgtccggccatattctggcggcgcaccacaagcattcgactcctcttctcagcgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0006935 GO:0007154 GO:0007275 GO:0008150 GO:0009553 GO:0009605 GO:0009856 GO:0009875 GO:0009987 GO:0010183 GO:0022414 GO:0032501 GO:0032502 GO:0040011 GO:0042221 GO:0042330 GO:0044706 GO:0048229 GO:0048856 GO:0048868 GO:0050896 GO:0050918 GO:0051704

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_11 AAA_12

Protein Analysis

714

Amino Acids

78.79

Weight (kDa)

6.25

Isoelectric Point (pI)

38.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003781)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15570 AT4G15570 AT4G15570 AT4G15570
fragaria_vesca	FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_3g12391 FvH4_4g11281 FvH4_4g11281 FvH4_4g11281 FvH4_4g11281
malus_domestica	MD15G1420100.v1.1 MD15G1420400.v1.1
prunus_persica	Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1 Prupe.1G566100_v2.0.a1
pyrus_communis	pycom15g37290
rosa_chinensis	RchiOBHm_Chr4g0407481
rosa_laevigata	RLG00000008716
rosa_multiflora	Rmu_sc0004841.1_g000016
rosa_roxburghii	Rroxscaffold_5G00352130
rosa_rugosa	Rorug04G0080000
rosa_samantha	Rh4AG144700 Rh4BG142600 Rh4CG151400 Rh4DG138600
rosa_wichuraiana	Rw4G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	998, 1481
Acc36I	ACCTGC	1 cut(s)	1036
AccB1I	GGYRCC	1 cut(s)	261
AccB7I	CCANNNNNTGG	2 cut(s)	620, 2102
AccII	CGCG	3 cut(s)	289, 2050, 2055
AciI	CCGC	8 cut(s)	381, 745, 784, 1098, 1165, 1818, 2048, 2106
AclI	AACGTT	1 cut(s)	1519
AclWI	GGATC	7 cut(s)	112, 112, 125, 148, 155, 1387, 1726
AcoI	YGGCCR	1 cut(s)	2093
AcsI	RAATTY	5 cut(s)	110, 521, 971, 1127, 1406
AcuI	CTGAAG	1 cut(s)	1211
AcyI	GRCGYC	1 cut(s)	262
AfaI	GTAC	3 cut(s)	672, 840, 1531
AfeI	AGCGCT	3 cut(s)	366, 1774, 2141
AfiI	CCNNNNNNNGG	5 cut(s)	398, 593, 620, 2091, 2102
AflIII	ACRYGT	1 cut(s)	673
AgsI	TTSAA	9 cut(s)	526, 696, 1025, 1091, 1406, 1417, 1513, 1525, 1889
AjiI	CACGTC	1 cut(s)	1592
AjnI	CCWGG	6 cut(s)	264, 391, 467, 548, 1584, 1707
AjuI	GAANNNNNNNTTGG	2 cut(s)	1629, 1661
AluBI	AGCT	7 cut(s)	76, 835, 902, 1010, 1227, 1314, 1453
AluI	AGCT	7 cut(s)	76, 835, 902, 1010, 1227, 1314, 1453
Alw21I	GWGCWC	2 cut(s)	691, 1498
Alw26I	GTCTC	4 cut(s)	549, 826, 1116, 1777
Alw44I	GTGCAC	1 cut(s)	1494
AlwI	GGATC	7 cut(s)	112, 112, 125, 148, 155, 1387, 1726
Ama87I	CYCGRG	1 cut(s)	2035
Aor51HI	AGCGCT	3 cut(s)	366, 1774, 2141
AoxI	GGCC	4 cut(s)	26, 918, 2074, 2093
ApaI	GGGCCC	1 cut(s)	30
ApaLI	GTGCAC	1 cut(s)	1494
ApeKI	GCWGC	5 cut(s)	76, 341, 367, 1010, 1314
ApoI	RAATTY	5 cut(s)	110, 521, 971, 1127, 1406
Asp700I	GAANNNNTTC	2 cut(s)	894, 1662
AspLEI	GCGC	7 cut(s)	264, 289, 367, 424, 1775, 2111, 2142
AspS9I	GGNCC	7 cut(s)	26, 27, 89, 386, 1268, 1322, 2009
AsuC2I	CCSGG	1 cut(s)	122
AsuHPI	GGTGA	5 cut(s)	896, 1091, 1399, 1447, 1982
AsuII	TTCGAA	1 cut(s)	1805
AvaI	CYCGRG	1 cut(s)	2035
AvaII	GGWCC	5 cut(s)	89, 386, 1268, 1322, 2009
AxyI	CCTNAGG	1 cut(s)	1368
BaeGI	GKGCMC	2 cut(s)	30, 1498
BamHI	GGATCC	1 cut(s)	117
BanI	GGYRCC	1 cut(s)	261
BanII	GRGCYC	2 cut(s)	30, 2042
BbsI	GAAGAC	1 cut(s)	922
Bbv12I	GWGCWC	2 cut(s)	691, 1498
BbvI	GCAGC	5 cut(s)	63, 328, 354, 997, 1301
BccI	CCATC	8 cut(s)	295, 596, 872, 1259, 1571, 1978, 1991, 2000
BceAI	ACGGC	2 cut(s)	354, 905
BciT130I	CCWGG	6 cut(s)	266, 393, 469, 550, 1586, 1709
BcnI	CCSGG	1 cut(s)	122
BcoDI	GTCTC	4 cut(s)	549, 826, 1116, 1777
BfaI	CTAG	9 cut(s)	14, 482, 539, 570, 875, 1461, 1689, 1763, 2027
BfoI	RGCGCY	4 cut(s)	265, 368, 1776, 2143
BfuAI	ACCTGC	1 cut(s)	1036
BglII	AGATCT	1 cut(s)	1504
BisI	GCNGC	6 cut(s)	77, 342, 368, 1011, 1315, 2107
BlsI	GCNGC	6 cut(s)	78, 343, 369, 1012, 1316, 2108
BmcAI	AGTACT	1 cut(s)	1531
Bme1390I	CCNGG	7 cut(s)	122, 266, 393, 469, 550, 1586, 1709
Bme18I	GGWCC	5 cut(s)	89, 386, 1268, 1322, 2009
BmeT110I	CYCGRG	1 cut(s)	2035
BmgBI	CACGTC	1 cut(s)	1592
BmgT120I	GGNCC	7 cut(s)	26, 27, 89, 386, 1268, 1322, 2009
BmiI	GGNNCC	5 cut(s)	28, 90, 91, 119, 263
BmrFI	CCNGG	7 cut(s)	122, 266, 393, 469, 550, 1586, 1709
BmsI	GCATC	7 cut(s)	502, 1046, 1185, 1219, 1709, 1733, 1924
BpiI	GAAGAC	1 cut(s)	922
BpmI	CTGGAG	2 cut(s)	375, 1257
Bpu14I	TTCGAA	1 cut(s)	1805
BpuMI	CCSGG	1 cut(s)	122
Bsa29I	ATCGAT	1 cut(s)	2022
BsaAI	YACGTR	1 cut(s)	674
BsaBI	GATNNNNATC	2 cut(s)	276, 1723
BsaHI	GRCGYC	1 cut(s)	262
BsaJI	CCNNGG	3 cut(s)	468, 548, 1585
Bsc4I	CCNNNNNNNGG	5 cut(s)	398, 593, 620, 2091, 2102
Bse1I	ACTGG	3 cut(s)	241, 625, 1178
Bse21I	CCTNAGG	1 cut(s)	1368
Bse3DI	GCAATG	2 cut(s)	66, 1116
Bse8I	GATNNNNATC	2 cut(s)	276, 1723
BseBI	CCWGG	6 cut(s)	266, 393, 469, 550, 1586, 1709
BseCI	ATCGAT	1 cut(s)	2022
BseDI	CCNNGG	3 cut(s)	468, 548, 1585
BseGI	GGATG	7 cut(s)	163, 754, 1061, 1210, 1939, 1999, 2011
BseJI	GATNNNNATC	2 cut(s)	276, 1723
BseLI	CCNNNNNNNGG	5 cut(s)	398, 593, 620, 2091, 2102
BseMI	GCAATG	2 cut(s)	66, 1116
BseMII	CTCAG	3 cut(s)	955, 1382, 1539
BseNI	ACTGG	3 cut(s)	241, 625, 1178
BseRI	GAGGAG	5 cut(s)	929, 1750, 1753, 2074, 2119
BseSI	GKGCMC	2 cut(s)	30, 1498
BseXI	GCAGC	5 cut(s)	63, 328, 354, 997, 1301
BseYI	CCCAGC	1 cut(s)	1948
BsgI	GTGCAG	2 cut(s)	687, 996
Bsh1236I	CGCG	3 cut(s)	289, 2050, 2055
BshFI	GGCC	4 cut(s)	28, 920, 2076, 2095
BshNI	GGYRCC	1 cut(s)	261
BshVI	ATCGAT	1 cut(s)	2022
BsiHKAI	GWGCWC	2 cut(s)	691, 1498
BsiHKCI	CYCGRG	1 cut(s)	2035
BsiSI	CCGG	3 cut(s)	121, 2077, 2092
BslFI	GGGAC	4 cut(s)	75, 756, 1602, 1991
BslI	CCNNNNNNNGG	5 cut(s)	398, 593, 620, 2091, 2102
BsmAI	GTCTC	4 cut(s)	549, 826, 1116, 1777
BsmBI	CGTCTC	1 cut(s)	549
BsmFI	GGGAC	4 cut(s)	75, 756, 1602, 1991
BsmI	GAATGC	2 cut(s)	1396, 2120
BsnI	GGCC	4 cut(s)	28, 920, 2076, 2095
BsoBI	CYCGRG	1 cut(s)	2035
Bsp119I	TTCGAA	1 cut(s)	1805
Bsp120I	GGGCCC	1 cut(s)	26
Bsp1286I	GDGCHC	4 cut(s)	30, 691, 1498, 2042
BspACI	CCGC	8 cut(s)	381, 745, 784, 1098, 1165, 1818, 2048, 2106
BspANI	GGCC	4 cut(s)	28, 920, 2076, 2095
BspCNI	CTCAG	3 cut(s)	954, 1381, 1540
BspDI	ATCGAT	1 cut(s)	2022
BspFNI	CGCG	3 cut(s)	289, 2050, 2055
BspLI	GGNNCC	5 cut(s)	28, 90, 91, 119, 263
BspMI	ACCTGC	1 cut(s)	1036
BspPI	GGATC	7 cut(s)	112, 112, 125, 148, 155, 1387, 1726
BspT104I	TTCGAA	1 cut(s)	1805
BspT107I	GGYRCC	1 cut(s)	261
BsrDI	GCAATG	2 cut(s)	66, 1116
BsrI	ACTGG	3 cut(s)	241, 625, 1178
BssECI	CCNNGG	3 cut(s)	468, 548, 1585
BssNI	GRCGYC	1 cut(s)	262
Bst2UI	CCWGG	6 cut(s)	266, 393, 469, 550, 1586, 1709
Bst4CI	ACNGT	6 cut(s)	98, 761, 1105, 1493, 1573, 1927
Bst6I	CTCTTC	1 cut(s)	2137
BstACI	GRCGYC	1 cut(s)	262
BstBAI	YACGTR	1 cut(s)	674
BstBI	TTCGAA	1 cut(s)	1805
BstC8I	GCNNGC	5 cut(s)	444, 1098, 1167, 1630, 1913
BstDEI	CTNAG	6 cut(s)	428, 554, 941, 1368, 1548, 2136
BstEII	GGTNACC	1 cut(s)	1079
BstF5I	GGATG	7 cut(s)	163, 754, 1061, 1210, 1939, 1999, 2011
BstFNI	CGCG	3 cut(s)	289, 2050, 2055
BstH2I	RGCGCY	4 cut(s)	265, 368, 1776, 2143
BstHHI	GCGC	7 cut(s)	264, 289, 367, 424, 1775, 2111, 2142
BstMAI	GTCTC	4 cut(s)	549, 826, 1116, 1777
BstMWI	GCNNNNNNNGC	8 cut(s)	452, 473, 899, 1016, 1195, 1291, 1300, 2117
BstNI	CCWGG	6 cut(s)	266, 393, 469, 550, 1586, 1709
BstNSI	RCATGY	2 cut(s)	446, 1915
BstPI	GGTNACC	1 cut(s)	1079
BstSCI	CCNGG	7 cut(s)	120, 264, 391, 467, 548, 1584, 1707
BstSLI	GKGCMC	2 cut(s)	30, 1498
BstUI	CGCG	3 cut(s)	289, 2050, 2055
BstV1I	GCAGC	5 cut(s)	63, 328, 354, 997, 1301
BstV2I	GAAGAC	1 cut(s)	922
BstX2I	RGATCY	7 cut(s)	104, 117, 140, 147, 1379, 1504, 1718
BstXI	CCANNNNNNTGG	1 cut(s)	101
BstYI	RGATCY	7 cut(s)	104, 117, 140, 147, 1379, 1504, 1718
Bsu15I	ATCGAT	1 cut(s)	2022
Bsu36I	CCTNAGG	1 cut(s)	1368
BsuRI	GGCC	4 cut(s)	28, 920, 2076, 2095
BsuTUI	ATCGAT	1 cut(s)	2022
BtgZI	GCGATG	1 cut(s)	612
BtrI	CACGTC	1 cut(s)	1592
BtsCI	GGATG	7 cut(s)	163, 754, 1061, 1210, 1939, 1999, 2011
BtsI	GCAGTG	3 cut(s)	170, 476, 955
BtsIMutI	CAGTG	7 cut(s)	170, 476, 618, 955, 1185, 1834, 1923
BveI	ACCTGC	1 cut(s)	1036
Cac8I	GCNNGC	5 cut(s)	444, 1098, 1167, 1630, 1913
CfoI	GCGC	7 cut(s)	264, 289, 367, 424, 1775, 2111, 2142
Cfr13I	GGNCC	7 cut(s)	26, 27, 89, 386, 1268, 1322, 2009
ClaI	ATCGAT	1 cut(s)	2022
CseI	GACGC	2 cut(s)	531, 2061
Csp6I	GTAC	3 cut(s)	671, 839, 1530
CviAII	CATG	9 cut(s)	443, 859, 1186, 1299, 1304, 1346, 1870, 1912, 1990
CviQI	GTAC	3 cut(s)	671, 839, 1530
DdeI	CTNAG	6 cut(s)	428, 554, 941, 1368, 1548, 2136
DinI	GGCGCC	1 cut(s)	263
EaeI	YGGCCR	1 cut(s)	2093
Eam1104I	CTCTTC	1 cut(s)	2137
EarI	CTCTTC	1 cut(s)	2137
Eco24I	GRGCYC	2 cut(s)	30, 2042
Eco32I	GATATC	2 cut(s)	1175, 1445
Eco47I	GGWCC	5 cut(s)	89, 386, 1268, 1322, 2009
Eco47III	AGCGCT	3 cut(s)	366, 1774, 2141
Eco57I	CTGAAG	1 cut(s)	1211
Eco81I	CCTNAGG	1 cut(s)	1368
Eco88I	CYCGRG	1 cut(s)	2035
Eco91I	GGTNACC	1 cut(s)	1079
EcoO109I	RGGNCCY	1 cut(s)	89
EcoO65I	GGTNACC	1 cut(s)	1079
EcoRII	CCWGG	6 cut(s)	264, 391, 467, 548, 1584, 1707
EcoRV	GATATC	2 cut(s)	1175, 1445
EcoT22I	ATGCAT	1 cut(s)	1212
EcoT38I	GRGCYC	2 cut(s)	30, 2042
EgeI	GGCGCC	1 cut(s)	263
EheI	GGCGCC	1 cut(s)	263
Esp3I	CGTCTC	1 cut(s)	549
FaeI	CATG	9 cut(s)	446, 862, 1189, 1302, 1307, 1349, 1873, 1915, 1993
FalI	AAGNNNNNCTT	4 cut(s)	1216, 1248, 1366, 1398
FaqI	GGGAC	4 cut(s)	75, 756, 1602, 1991
FatI	CATG	9 cut(s)	442, 858, 1185, 1298, 1303, 1345, 1869, 1911, 1989
FauI	CCCGC	4 cut(s)	738, 1105, 1158, 2055
Fnu4HI	GCNGC	6 cut(s)	77, 342, 368, 1011, 1315, 2107
FokI	GGATG	7 cut(s)	170, 761, 1068, 1197, 1946, 2006, 2018
FriOI	GRGCYC	2 cut(s)	30, 2042
Fsp4HI	GCNGC	6 cut(s)	77, 342, 368, 1011, 1315, 2107
FspBI	CTAG	9 cut(s)	14, 482, 539, 570, 875, 1461, 1689, 1763, 2027
GlaI	GCGC	7 cut(s)	263, 288, 366, 423, 1774, 2110, 2141
GluI	GCNGC	6 cut(s)	77, 342, 368, 1011, 1315, 2107
GsaI	CCCAGC	1 cut(s)	1952
GsuI	CTGGAG	2 cut(s)	375, 1257
HaeII	RGCGCY	4 cut(s)	265, 368, 1776, 2143
HaeIII	GGCC	4 cut(s)	28, 920, 2076, 2095
HapII	CCGG	3 cut(s)	121, 2077, 2092
HgaI	GACGC	2 cut(s)	531, 2061
HhaI	GCGC	7 cut(s)	264, 289, 367, 424, 1775, 2111, 2142
Hin1I	GRCGYC	1 cut(s)	262
Hin1II	CATG	9 cut(s)	446, 862, 1189, 1302, 1307, 1349, 1873, 1915, 1993
Hin6I	GCGC	7 cut(s)	262, 287, 365, 422, 1773, 2109, 2140
HinP1I	GCGC	7 cut(s)	262, 287, 365, 422, 1773, 2109, 2140
HindIII	AAGCTT	1 cut(s)	1225
HinfI	GANTC	7 cut(s)	1033, 1253, 1544, 1741, 1837, 1844, 2126
HpaII	CCGG	3 cut(s)	121, 2077, 2092
HphI	GGTGA	5 cut(s)	896, 1091, 1399, 1447, 1982
Hpy166II	GTNNAC	4 cut(s)	68, 671, 1496, 1543
Hpy188I	TCNGA	9 cut(s)	109, 815, 1074, 1223, 1280, 1538, 1549, 2019, 2044
Hpy8I	GTNNAC	4 cut(s)	68, 671, 1496, 1543
Hpy99I	CGWCG	1 cut(s)	2055
HpyAV	CCTTC	7 cut(s)	261, 702, 1134, 1242, 1343, 1631, 2024
HpyCH4III	ACNGT	6 cut(s)	98, 761, 1105, 1493, 1573, 1927
HpyCH4IV	ACGT	3 cut(s)	673, 1519, 1591
HpyF10VI	GCNNNNNNNGC	8 cut(s)	452, 473, 899, 1016, 1195, 1291, 1300, 2117
HpyF3I	CTNAG	6 cut(s)	428, 554, 941, 1368, 1548, 2136
HpySE526I	ACGT	3 cut(s)	673, 1519, 1591
Hsp92I	GRCGYC	1 cut(s)	262
Hsp92II	CATG	9 cut(s)	446, 862, 1189, 1302, 1307, 1349, 1873, 1915, 1993
HspAI	GCGC	7 cut(s)	262, 287, 365, 422, 1773, 2109, 2140
KasI	GGCGCC	1 cut(s)	261
KflI	GGGWCCC	1 cut(s)	89
LmnI	GCTCC	1 cut(s)	694
Lsp1109I	GCAGC	5 cut(s)	63, 328, 354, 997, 1301
LweI	GCATC	7 cut(s)	502, 1046, 1185, 1219, 1709, 1733, 1924
MaeI	CTAG	9 cut(s)	14, 482, 539, 570, 875, 1461, 1689, 1763, 2027
MaeII	ACGT	3 cut(s)	673, 1519, 1591
MaeIII	GTNAC	4 cut(s)	755, 1079, 1180, 1970
MboII	GAAGA	7 cut(s)	178, 922, 1204, 1274, 1670, 1874, 2124
MflI	RGATCY	7 cut(s)	104, 117, 140, 147, 1379, 1504, 1718
MhlI	GDGCHC	4 cut(s)	30, 691, 1498, 2042
Mly113I	GGCGCC	1 cut(s)	262
MlyI	GAGTC	6 cut(s)	1027, 1247, 1538, 1750, 1846, 2120
MmeI	TCCRAC	3 cut(s)	272, 638, 1696
Mph1103I	ATGCAT	1 cut(s)	1212
MroXI	GAANNNNTTC	2 cut(s)	894, 1662
MseI	TTAA	5 cut(s)	591, 632, 1455, 1793, 1797
MslI	CAYNNNNRTG	2 cut(s)	215, 1121
MspA1I	CMGCKG	2 cut(s)	383, 1165
MspI	CCGG	3 cut(s)	121, 2077, 2092
MspR9I	CCNGG	7 cut(s)	122, 266, 393, 469, 550, 1586, 1709
Mva1269I	GAATGC	2 cut(s)	1396, 2120
MvaI	CCWGG	6 cut(s)	266, 393, 469, 550, 1586, 1709
MvnI	CGCG	3 cut(s)	289, 2050, 2055
MwoI	GCNNNNNNNGC	8 cut(s)	452, 473, 899, 1016, 1195, 1291, 1300, 2117
NarI	GGCGCC	1 cut(s)	262
NciI	CCSGG	1 cut(s)	122
NlaIII	CATG	9 cut(s)	446, 862, 1189, 1302, 1307, 1349, 1873, 1915, 1993
NlaIV	GGNNCC	5 cut(s)	28, 90, 91, 119, 263
NmuCI	GTSAC	4 cut(s)	755, 1079, 1180, 1970
NsiI	ATGCAT	1 cut(s)	1212
NspI	RCATGY	2 cut(s)	446, 1915
NspV	TTCGAA	1 cut(s)	1805
PacI	TTAATTAA	1 cut(s)	1797
PaeI	GCATGC	2 cut(s)	446, 1915
PctI	GAATGC	2 cut(s)	1396, 2120
PdmI	GAANNNNTTC	2 cut(s)	894, 1662
PfeI	GAWTC	1 cut(s)	1844
PflMI	CCANNNNNTGG	2 cut(s)	620, 2102
PfoI	TCCNGGA	1 cut(s)	391
PkrI	GCNGC	6 cut(s)	78, 343, 369, 1012, 1316, 2108
PleI	GAGTC	6 cut(s)	1027, 1247, 1538, 1749, 1845, 2120
PluTI	GGCGCC	1 cut(s)	265
PpsI	GAGTC	6 cut(s)	1027, 1247, 1538, 1749, 1845, 2120
Ppu21I	YACGTR	1 cut(s)	674
PpuMI	RGGWCCY	1 cut(s)	89
PsiI	TTATAA	2 cut(s)	998, 1481
Psp1406I	AACGTT	1 cut(s)	1519
Psp5II	RGGWCCY	1 cut(s)	89
Psp6I	CCWGG	6 cut(s)	264, 391, 467, 548, 1584, 1707
PspEI	GGTNACC	1 cut(s)	1079
PspFI	CCCAGC	1 cut(s)	1948
PspGI	CCWGG	6 cut(s)	264, 391, 467, 548, 1584, 1707
PspN4I	GGNNCC	5 cut(s)	28, 90, 91, 119, 263
PspOMI	GGGCCC	1 cut(s)	26
PspPI	GGNCC	7 cut(s)	26, 27, 89, 386, 1268, 1322, 2009
PspPPI	RGGWCCY	1 cut(s)	89
PsrI	GAACNNNNNNTAC	2 cut(s)	937, 969
PsuI	RGATCY	7 cut(s)	104, 117, 140, 147, 1379, 1504, 1718
RsaI	GTAC	3 cut(s)	672, 840, 1531
RsaNI	GTAC	3 cut(s)	671, 839, 1530
RseI	CAYNNNNRTG	2 cut(s)	215, 1121
SaqAI	TTAA	5 cut(s)	591, 632, 1455, 1793, 1797
SatI	GCNGC	6 cut(s)	77, 342, 368, 1011, 1315, 2107
Sau96I	GGNCC	7 cut(s)	26, 27, 89, 386, 1268, 1322, 2009
ScaI	AGTACT	1 cut(s)	1531
SchI	GAGTC	6 cut(s)	1027, 1247, 1538, 1750, 1846, 2120
ScrFI	CCNGG	7 cut(s)	122, 266, 393, 469, 550, 1586, 1709
SduI	GDGCHC	4 cut(s)	30, 691, 1498, 2042
SfaNI	GCATC	7 cut(s)	502, 1046, 1185, 1219, 1709, 1733, 1924
SfoI	GGCGCC	1 cut(s)	263
SfuI	TTCGAA	1 cut(s)	1805
SinI	GGWCC	5 cut(s)	89, 386, 1268, 1322, 2009
SmiMI	CAYNNNNRTG	2 cut(s)	215, 1121
SphI	GCATGC	2 cut(s)	446, 1915
SsiI	CCGC	8 cut(s)	381, 745, 784, 1098, 1165, 1818, 2048, 2106
SspDI	GGCGCC	1 cut(s)	261
SspI	AATATT	1 cut(s)	1611
SspMI	CTAG	9 cut(s)	14, 482, 539, 570, 875, 1461, 1689, 1763, 2027
StyD4I	CCNGG	7 cut(s)	120, 264, 391, 467, 548, 1584, 1707
TaaI	ACNGT	6 cut(s)	98, 761, 1105, 1493, 1573, 1927
TaiI	ACGT	3 cut(s)	676, 1522, 1594
TaqI	TCGA	9 cut(s)	299, 375, 708, 898, 935, 1152, 1805, 2022, 2124
TatI	WGTACW	1 cut(s)	1529
TauI	GCSGC	1 cut(s)	2109
TfiI	GAWTC	1 cut(s)	1844
Tru1I	TTAA	5 cut(s)	591, 632, 1455, 1793, 1797
Tru9I	TTAA	5 cut(s)	591, 632, 1455, 1793, 1797
TscAI	CASTG	7 cut(s)	177, 483, 625, 955, 1185, 1834, 1930
TseFI	GTSAC	4 cut(s)	755, 1079, 1180, 1970
TseI	GCWGC	5 cut(s)	76, 341, 367, 1010, 1314
Tsp45I	GTSAC	4 cut(s)	755, 1079, 1180, 1970
TspGWI	ACGGA	2 cut(s)	338, 2077
TspRI	CASTG	7 cut(s)	177, 483, 625, 955, 1185, 1834, 1930
Van91I	CCANNNNNTGG	2 cut(s)	620, 2102
VneI	GTGCAC	1 cut(s)	1494
VpaK11BI	GGWCC	5 cut(s)	89, 386, 1268, 1322, 2009
XapI	RAATTY	5 cut(s)	110, 521, 971, 1127, 1406
XbaI	TCTAGA	1 cut(s)	2026
XceI	RCATGY	2 cut(s)	446, 1915
XcmI	CCANNNNNNNNNTGG	1 cut(s)	832
XmnI	GAANNNNTTC	2 cut(s)	894, 1662
XspI	CTAG	9 cut(s)	14, 482, 539, 570, 875, 1461, 1689, 1763, 2027
ZrmI	AGTACT	1 cut(s)	1531
Zsp2I	ATGCAT	1 cut(s)	1212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.