60S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17080 AT1G53560 |
| fragaria_vesca | FvH4_3g17030 |
| malus_domestica | MD00G1185700.v1.1 MD03G1254000.v1.1 MD11G1275700.v1.1 |
| prunus_persica | Prupe.4G152400_v2.0.a1 Prupe.4G152400_v2.0.a1 Prupe.4G152400_v2.0.a1 |
| pyrus_communis | pycom03g20160 pycom11g24390 |
| rosa_chinensis | RchiOBHm_Chr5g0028371 |
| rosa_laevigata | RLG00000033089 |
| rosa_multiflora | Rmu_sc0001561.1_g000017 Rmu_sc0006071.1_g000001 Rmu_sc0008526.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00051340 |
| rosa_rugosa | Rorug05G0105900 |
| rosa_samantha | Rh5AG199700 Rh5BG198200 Rh5CG218200 Rh5DG200100 |
| rosa_wichuraiana | Rw5G018200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 458 |
| AciI | CCGC | 4 cut(s) | 6, 140, 150, 173 |
| AfaI | GTAC | 3 cut(s) | 101, 203, 226 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 101, 146, 149, 176, 287 |
| AjnI | CCWGG | 2 cut(s) | 377, 400 |
| Alw26I | GTCTC | 1 cut(s) | 302 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 425 |
| Ama87I | CYCGRG | 1 cut(s) | 95 |
| ApeKI | GCWGC | 2 cut(s) | 335, 425 |
| AsuC2I | CCSGG | 2 cut(s) | 177, 234 |
| AsuHPI | GGTGA | 1 cut(s) | 370 |
| AvaI | CYCGRG | 1 cut(s) | 95 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 208, 241 |
| BanI | GGYRCC | 1 cut(s) | 458 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 92, 124 |
| BbsI | GAAGAC | 2 cut(s) | 21, 262 |
| BbvCI | CCTCAGC | 2 cut(s) | 159, 249 |
| BbvI | GCAGC | 2 cut(s) | 322, 412 |
| BccI | CCATC | 1 cut(s) | 66 |
| BceAI | ACGGC | 1 cut(s) | 163 |
| BciT130I | CCWGG | 2 cut(s) | 379, 402 |
| BcnI | CCSGG | 2 cut(s) | 177, 234 |
| BcoDI | GTCTC | 1 cut(s) | 302 |
| BfaI | CTAG | 1 cut(s) | 368 |
| BisI | GCNGC | 3 cut(s) | 151, 336, 426 |
| BlsI | GCNGC | 3 cut(s) | 152, 337, 427 |
| BmcAI | AGTACT | 1 cut(s) | 203 |
| Bme1390I | CCNGG | 4 cut(s) | 177, 234, 379, 402 |
| BmeT110I | CYCGRG | 1 cut(s) | 95 |
| BmiI | GGNNCC | 4 cut(s) | 93, 106, 181, 460 |
| BmrFI | CCNGG | 4 cut(s) | 177, 234, 379, 402 |
| BpiI | GAAGAC | 2 cut(s) | 21, 262 |
| Bpu10I | CCTNAGC | 2 cut(s) | 159, 249 |
| BpuEI | CTTGAG | 1 cut(s) | 195 |
| BpuMI | CCSGG | 2 cut(s) | 177, 234 |
| BsaI | GGTCTC | 1 cut(s) | 302 |
| BsaJI | CCNNGG | 3 cut(s) | 112, 344, 454 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 101, 146, 149, 176, 287 |
| Bse1I | ACTGG | 2 cut(s) | 164, 485 |
| BseBI | CCWGG | 2 cut(s) | 379, 402 |
| BseDI | CCNNGG | 3 cut(s) | 112, 344, 454 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 101, 146, 149, 176, 287 |
| BseMII | CTCAG | 3 cut(s) | 173, 212, 240 |
| BseNI | ACTGG | 2 cut(s) | 164, 485 |
| BseRI | GAGGAG | 8 cut(s) | 57, 60, 63, 66, 69, 72, 123, 186 |
| BseXI | GCAGC | 2 cut(s) | 322, 412 |
| BshNI | GGYRCC | 1 cut(s) | 458 |
| BsiHKCI | CYCGRG | 1 cut(s) | 95 |
| BsiSI | CCGG | 2 cut(s) | 176, 234 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 101, 146, 149, 176, 287 |
| BsmAI | GTCTC | 1 cut(s) | 302 |
| Bso31I | GGTCTC | 1 cut(s) | 302 |
| BsoBI | CYCGRG | 1 cut(s) | 95 |
| Bsp19I | CCATGG | 1 cut(s) | 344 |
| BspACI | CCGC | 4 cut(s) | 6, 140, 150, 173 |
| BspCNI | CTCAG | 3 cut(s) | 172, 211, 241 |
| BspLI | GGNNCC | 4 cut(s) | 93, 106, 181, 460 |
| BspT107I | GGYRCC | 1 cut(s) | 458 |
| BspTNI | GGTCTC | 1 cut(s) | 302 |
| BsrI | ACTGG | 2 cut(s) | 164, 485 |
| BssECI | CCNNGG | 3 cut(s) | 112, 344, 454 |
| BssT1I | CCWWGG | 3 cut(s) | 112, 344, 454 |
| Bst2UI | CCWGG | 2 cut(s) | 379, 402 |
| Bst4CI | ACNGT | 2 cut(s) | 229, 421 |
| Bst6I | CTCTTC | 1 cut(s) | 20 |
| BstC8I | GCNNGC | 2 cut(s) | 278, 415 |
| BstDEI | CTNAG | 3 cut(s) | 159, 198, 249 |
| BstDSI | CCRYGG | 1 cut(s) | 344 |
| BstEII | GGTNACC | 1 cut(s) | 215 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstMAI | GTCTC | 1 cut(s) | 302 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 277, 282, 434, 443 |
| BstNI | CCWGG | 2 cut(s) | 379, 402 |
| BstPI | GGTNACC | 1 cut(s) | 215 |
| BstSCI | CCNGG | 4 cut(s) | 175, 232, 377, 400 |
| BstV1I | GCAGC | 2 cut(s) | 322, 412 |
| BstV2I | GAAGAC | 2 cut(s) | 21, 262 |
| BtgI | CCRYGG | 1 cut(s) | 344 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| BtsI | GCAGTG | 1 cut(s) | 49 |
| BtsIMutI | CAGTG | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 2 cut(s) | 278, 415 |
| CaiI | CAGNNNCTG | 1 cut(s) | 425 |
| CseI | GACGC | 1 cut(s) | 260 |
| Csp6I | GTAC | 3 cut(s) | 100, 202, 225 |
| CviAII | CATG | 1 cut(s) | 345 |
| CviJI | RGCY | 5 cut(s) | 92, 153, 163, 182, 303 |
| CviKI_1 | RGCY | 5 cut(s) | 92, 153, 163, 182, 303 |
| CviQI | GTAC | 3 cut(s) | 100, 202, 225 |
| DdeI | CTNAG | 3 cut(s) | 159, 198, 249 |
| Eam1104I | CTCTTC | 1 cut(s) | 20 |
| EarI | CTCTTC | 1 cut(s) | 20 |
| EciI | GGCGGA | 2 cut(s) | 21, 162 |
| Eco130I | CCWWGG | 3 cut(s) | 112, 344, 454 |
| Eco31I | GGTCTC | 1 cut(s) | 302 |
| Eco88I | CYCGRG | 1 cut(s) | 95 |
| Eco91I | GGTNACC | 1 cut(s) | 215 |
| EcoO65I | GGTNACC | 1 cut(s) | 215 |
| EcoRII | CCWGG | 2 cut(s) | 377, 400 |
| EcoT14I | CCWWGG | 3 cut(s) | 112, 344, 454 |
| ErhI | CCWWGG | 3 cut(s) | 112, 344, 454 |
| FaeI | CATG | 1 cut(s) | 348 |
| FaiI | YATR | 5 cut(s) | 35, 240, 346, 351, 408 |
| FatI | CATG | 1 cut(s) | 344 |
| Fnu4HI | GCNGC | 3 cut(s) | 151, 336, 426 |
| FokI | GGATG | 1 cut(s) | 48 |
| Fsp4HI | GCNGC | 3 cut(s) | 151, 336, 426 |
| FspBI | CTAG | 1 cut(s) | 368 |
| GluI | GCNGC | 3 cut(s) | 151, 336, 426 |
| HapII | CCGG | 2 cut(s) | 176, 234 |
| HgaI | GACGC | 1 cut(s) | 260 |
| Hin1II | CATG | 1 cut(s) | 348 |
| HinfI | GANTC | 1 cut(s) | 117 |
| HpaII | CCGG | 2 cut(s) | 176, 234 |
| HphI | GGTGA | 1 cut(s) | 370 |
| Hpy188III | TCNNGA | 1 cut(s) | 95 |
| Hpy99I | CGWCG | 1 cut(s) | 276 |
| HpyAV | CCTTC | 2 cut(s) | 96, 118 |
| HpyCH4III | ACNGT | 2 cut(s) | 229, 421 |
| HpyCH4V | TGCA | 1 cut(s) | 417 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 277, 282, 434, 443 |
| HpyF3I | CTNAG | 3 cut(s) | 159, 198, 249 |
| Hsp92II | CATG | 1 cut(s) | 348 |
| LmnI | GCTCC | 2 cut(s) | 97, 179 |
| Lsp1109I | GCAGC | 2 cut(s) | 322, 412 |
| MaeI | CTAG | 1 cut(s) | 368 |
| MaeIII | GTNAC | 1 cut(s) | 215 |
| MboII | GAAGA | 4 cut(s) | 26, 37, 267, 319 |
| MlyI | GAGTC | 1 cut(s) | 126 |
| MspI | CCGG | 2 cut(s) | 176, 234 |
| MspR9I | CCNGG | 4 cut(s) | 177, 234, 379, 402 |
| MvaI | CCWGG | 2 cut(s) | 379, 402 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 277, 282, 434, 443 |
| NciI | CCSGG | 2 cut(s) | 177, 234 |
| NcoI | CCATGG | 1 cut(s) | 344 |
| NlaIII | CATG | 1 cut(s) | 348 |
| NlaIV | GGNNCC | 4 cut(s) | 93, 106, 181, 460 |
| NmeAIII | GCCGAG | 1 cut(s) | 279 |
| PfoI | TCCNGGA | 1 cut(s) | 377 |
| PkrI | GCNGC | 3 cut(s) | 152, 337, 427 |
| PleI | GAGTC | 1 cut(s) | 125 |
| PpsI | GAGTC | 1 cut(s) | 125 |
| Psp6I | CCWGG | 2 cut(s) | 377, 400 |
| PspEI | GGTNACC | 1 cut(s) | 215 |
| PspGI | CCWGG | 2 cut(s) | 377, 400 |
| PspN4I | GGNNCC | 4 cut(s) | 93, 106, 181, 460 |
| PstNI | CAGNNNCTG | 1 cut(s) | 425 |
| RsaI | GTAC | 3 cut(s) | 101, 203, 226 |
| RsaNI | GTAC | 3 cut(s) | 100, 202, 225 |
| SatI | GCNGC | 3 cut(s) | 151, 336, 426 |
| ScaI | AGTACT | 1 cut(s) | 203 |
| SchI | GAGTC | 1 cut(s) | 126 |
| ScrFI | CCNGG | 4 cut(s) | 177, 234, 379, 402 |
| SetI | ASST | 5 cut(s) | 34, 110, 196, 217, 262 |
| SmlI | CTYRAG | 1 cut(s) | 210 |
| SmoI | CTYRAG | 1 cut(s) | 210 |
| SsiI | CCGC | 4 cut(s) | 6, 140, 150, 173 |
| SspMI | CTAG | 1 cut(s) | 368 |
| StyD4I | CCNGG | 4 cut(s) | 175, 232, 377, 400 |
| StyI | CCWWGG | 3 cut(s) | 112, 344, 454 |
| TaaI | ACNGT | 2 cut(s) | 229, 421 |
| TatI | WGTACW | 1 cut(s) | 201 |
| TauI | GCSGC | 1 cut(s) | 153 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TseI | GCWGC | 2 cut(s) | 335, 425 |
| TspGWI | ACGGA | 1 cut(s) | 117 |
| TspRI | CASTG | 1 cut(s) | 49 |
| XspI | CTAG | 1 cut(s) | 368 |
| ZrmI | AGTACT | 1 cut(s) | 203 |