Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007890

Physical Location & Seq

Genomic Coordinates Reverse (-)

16250739 .. 16259543

Gene Structure 8805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g23170.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGCTCTCCAACTCCATGGAGTTCAGACCTCGCGATTACACCGCCGAGAAACAAGCCCACGCGCTTCCTCGCTCACGCGCCGATGATCATCCTCTCTCCGCTCCATCGTCTCTAGCTCACCCCCAGGTTGAGGTGGTTGATGATGGGGAGACAGACTATCTTGATCCGCTCAGGAGGTCAGATAACAATGCAGCGGTTTCTAGAGTGGTTTCGGAAGGCGTTGAAGACATTTCTGCTTTGGGACTGTCAAGTGAGGCATCGTCGGTTGGAAATTCATCAAAAGAATGGGCCTTTTTTAAGAGATCACTGATGCAGTGGTTTCCAGTCTCCAAAATGGTGTTGACTTCTTCGATGTCCGATGTGATGGTGAAAGGCAGGAAAACATATGATAAATCTTCAACAAATATGCATTTGGAGGAACTGGAAGATCCAGAAAAATTTGCAGAAGAGGGTGGCAAAGTCATCACAGGACAGGAATATGTGTCCCGGTTACATGACCTCAAAGCTGAAATAAATCACAGTTGGCATGCTGATGACCGTGTGACGTCTTTGAAATTATCAATAAAAGTAGCTAAGCTTTTGATGGATACATCTATTTTACAATGTTATCCTACACTTTTTGCTCTCGCTACGGATATTATGGATATGCTTGGAGATATGGTATGGGAACGCATCAAGTTGAAAGCTGACTTAGCTGAAGACGGAACCAAACTCTGCTCGTTACCAGAAAACTTTGTTGCGAGGGATATTTGCTCCGATGCCAAAGAAACTTGCAACAACTGGTTCAGCAAAATTGGTGCAATCCGAGAGCTTCTTCCACGTATTTATTTGGAGCTCGCGTTATTGCCTTGCTGGCGTTTCTTACATGATCGACCTCTAGACTGTCTTCAGCGCTTGGTGATGATGATAAGAGGGTTAGCAGATCCATTGGCATCTGCCTACTGTCGCTTGTATATGGCCCATTGTCTTAGAAAGTTGCACTCTAATGATATAGGATGTCTGCTCACCTGTGTTAATGATTTCAAAATTTTGTTGATGCGGGTGATATCAGCAAAGGAAACAGTTCACGGAAACTTGACAGAAAACAAAAGATTGCTTATCAGTCTAATGGAACCCACCATTGATTATATCATGAAATGCATATTTAAAAATGTGTCCGAGAGACAAGTAAATGATGTACTAGTGGAGCTTGGGCTTGGATCTAATCAAGTGGAGCTGCGTGGAAGGTTCCCATGTGCCTCAATCATCCTCCATCATCTAGTCAAGCAACTTCCATTGCAAGTAGTTAGCTCAAGTGCTATGGAGATCCTTCAGCTCATTGAGTCCAGCAATGACGCTTCCTATGATCAGTGCCTGAACTACAGGTTACTTGGATTTAGGCTGTGTGAAAGAAAATCTGAAACGGGAACCGTCAATGCTGTGATGGATAAAGTCATCCAGGTTATTACGCAATATGAAGGCCTTGATGAGTACTTGAAGGTTGTGGATGCTTATGTGGATATTTTCCTTCAAAATCATATGGATGACCAGCTGAAATCCATTTTGGAAGGTATTTCAATCCGAGCAGGCACTCAAGGGATTGCTGAAGATGAACTGACAACCTTGCAGTCCATCTTGGTGAAGCTTCTTTCTTATTACAAGGTTTTAGAAGACATAATTGCTATGACCCCTTTTCTGAAGATCTTGGATTTAATGTATGGAAGTTCACAGAGCATCGTCAATATGCAGATCCTTGACATGGGGATAAGGAATGGTTGTATACGTGATCCGACAATTATACAATTTCTTTTTGAAATTTCTCAGGCCCTACATGATGATGAAAATTTTGTGAATGTAAAAGATGATTCTAACCAACCAGCACGTTTGATTTCTTCTTTTGTCTCACTGGTTGATTACGGGGCAGAGTTCGAAAGTCATTTAACCTTCTTAATTGAATGCCGTGCAGCTTTTGGTAGCATACACTGGCTTAAGGAAACTCTTGTTCACTCAAGTAATTGTTTAGCAATTAAGGCTTTGAAAGATGGGAACAGACATTTCAGTTTTATCAAATCCTGCATAGCATTTTCTGAAGTCACAATACCTTCTATTTCAGCTCAGACTAAGCAGCTAAATCTGTATCTCGAGACTGCAGAGGTAGCCTTACTTGGAGGTCTAGTTTCTCATTCAGATGGACTGATTGACTCAGCGATCAACTCTTTGCAAGTTTTAGAAGTGATGGATGGTGCCACAAAATTTAGGGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps35

Protein Analysis

748

Amino Acids

83.91

Weight (kDa)

5.31

Isoelectric Point (pI)

32.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50730 AT1G50730 AT1G50730
fragaria_vesca	FvH4_3g23170
malus_domestica	MD03G1197400.v1.1
prunus_persica	Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1
pyrus_communis	pycom03g14870
rosa_chinensis	RchiOBHm_Chr5g0040821
rosa_laevigata	RLG00000034005
rosa_multiflora	Rmu_sc0001579.1_g000005
rosa_roxburghii	Rroxscaffold_1G00039880
rosa_rugosa	Rorug05G0187900
rosa_samantha	Rh5AG273300 Rh5BG278500 Rh5CG310500 Rh5DG286400
rosa_wichuraiana	Rw5G025700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	548
AccB1I	GGYRCC	1 cut(s)	2222
AccBSI	CCGCTC	2 cut(s)	101, 169
AccI	GTMKAC	1 cut(s)	1759
AccII	CGCG	4 cut(s)	33, 62, 78, 839
AciI	CCGC	5 cut(s)	42, 99, 167, 194, 1039
AclWI	GGATC	7 cut(s)	158, 422, 917, 1207, 1300, 1723, 1760
AcsI	RAATTY	6 cut(s)	271, 437, 1026, 1794, 1822, 2231
AcuI	CTGAAG	6 cut(s)	717, 872, 1295, 1605, 1697, 2088
AcyI	GRCGYC	1 cut(s)	545
AfaI	GTAC	2 cut(s)	1179, 1472
AfeI	AGCGCT	1 cut(s)	893
AfiI	CCNNNNNNNGG	2 cut(s)	130, 1738
AflII	CTTAAG	1 cut(s)	1967
AhlI	ACTAGT	1 cut(s)	1180
AjnI	CCWGG	2 cut(s)	123, 1437
AjuI	GAANNNNNNNTTGG	2 cut(s)	1526, 1558
Alw21I	GWGCWC	1 cut(s)	837
Alw26I	GTCTC	6 cut(s)	114, 143, 331, 1156, 1885, 2117
AlwI	GGATC	7 cut(s)	158, 422, 917, 1207, 1300, 1723, 1760
AlwNI	CAGNNNCTG	1 cut(s)	1354
Ama87I	CYCGRG	1 cut(s)	2120
Aor51HI	AGCGCT	1 cut(s)	893
AoxI	GGCC	4 cut(s)	288, 957, 1459, 1803
ApeKI	GCWGC	4 cut(s)	191, 1216, 1943, 2104
ApoI	RAATTY	6 cut(s)	271, 437, 1026, 1794, 1822, 2231
Asp700I	GAANNNNTTC	1 cut(s)	1062
AspLEI	GCGC	3 cut(s)	64, 80, 894
AspS9I	GGNCC	3 cut(s)	288, 958, 1804
AsuC2I	CCSGG	1 cut(s)	487
AsuHPI	GGTGA	6 cut(s)	110, 379, 910, 997, 1054, 1630
AsuII	TTCGAA	1 cut(s)	1908
AvaI	CYCGRG	1 cut(s)	2120
BanI	GGYRCC	1 cut(s)	2222
BanII	GRGCYC	1 cut(s)	837
BarI	GAAGNNNNNNTAC	2 cut(s)	2061, 2093
BbsI	GAAGAC	4 cut(s)	231, 705, 878, 1656
Bbv12I	GWGCWC	1 cut(s)	837
BbvI	GCAGC	4 cut(s)	203, 1203, 1955, 2116
BceAI	ACGGC	1 cut(s)	1923
BciT130I	CCWGG	2 cut(s)	125, 1439
BciVI	GTATCC	1 cut(s)	580
BclI	TGATCA	2 cut(s)	85, 1345
BcnI	CCSGG	1 cut(s)	487
BcoDI	GTCTC	6 cut(s)	114, 143, 331, 1156, 1885, 2117
BcuI	ACTAGT	1 cut(s)	1180
BfaI	CTAG	6 cut(s)	113, 201, 878, 1181, 1259, 2153
BfmI	CTRYAG	2 cut(s)	1360, 2127
BfoI	RGCGCY	1 cut(s)	895
BfrI	CTTAAG	1 cut(s)	1967
BfuI	GTATCC	1 cut(s)	580
BglI	GCCNNNNNGGC	1 cut(s)	853
BglII	AGATCT	1 cut(s)	1680
BisI	GCNGC	4 cut(s)	192, 1217, 1944, 2105
BlpI	GCTNAGC	1 cut(s)	573
BlsI	GCNGC	4 cut(s)	193, 1218, 1945, 2106
BmcAI	AGTACT	1 cut(s)	1472
Bme1390I	CCNGG	3 cut(s)	125, 487, 1439
BmeT110I	CYCGRG	1 cut(s)	2120
BmgT120I	GGNCC	3 cut(s)	288, 958, 1804
BmiI	GGNNCC	5 cut(s)	706, 1113, 1229, 1408, 2224
BmrFI	CCNGG	3 cut(s)	125, 487, 1439
BmsI	GCATC	8 cut(s)	266, 300, 681, 748, 941, 1026, 1477, 1722
BpiI	GAAGAC	4 cut(s)	231, 705, 878, 1656
Bpu10I	CCTNAGC	1 cut(s)	170
Bpu1102I	GCTNAGC	1 cut(s)	573
Bpu14I	TTCGAA	1 cut(s)	1908
BpuEI	CTTGAG	3 cut(s)	1276, 1557, 1972
BpuMI	CCSGG	1 cut(s)	487
BsaAI	YACGTR	2 cut(s)	821, 1763
BsaBI	GATNNNNATC	1 cut(s)	87
BsaHI	GRCGYC	1 cut(s)	545
BsaJI	CCNNGG	2 cut(s)	15, 123
BsaXI	ACNNNNNCTCC	6 cut(s)	645, 675, 824, 854, 2139, 2169
Bsc4I	CCNNNNNNNGG	2 cut(s)	130, 1738
Bse1I	ACTGG	5 cut(s)	323, 426, 785, 1890, 1967
Bse3DI	GCAATG	2 cut(s)	1274, 1336
Bse8I	GATNNNNATC	1 cut(s)	87
BseBI	CCWGG	2 cut(s)	125, 1439
BseDI	CCNNGG	2 cut(s)	15, 123
BseGI	GGATG	7 cut(s)	88, 1001, 1245, 1434, 1492, 1528, 2224
BseJI	GATNNNNATC	1 cut(s)	87
BseLI	CCNNNNNNNGG	2 cut(s)	130, 1738
BseMI	GCAATG	2 cut(s)	1274, 1336
BseMII	CTCAG	4 cut(s)	184, 1814, 2108, 2196
BseNI	ACTGG	5 cut(s)	323, 426, 785, 1890, 1967
BseXI	GCAGC	4 cut(s)	203, 1203, 1955, 2116
BsgI	GTGCAG	1 cut(s)	1962
Bsh1236I	CGCG	4 cut(s)	33, 62, 78, 839
BshFI	GGCC	4 cut(s)	290, 959, 1461, 1805
BshNI	GGYRCC	1 cut(s)	2222
BsiHKAI	GWGCWC	1 cut(s)	837
BsiHKCI	CYCGRG	1 cut(s)	2120
BsiSI	CCGG	1 cut(s)	487
BslFI	GGGAC	2 cut(s)	255, 469
BslI	CCNNNNNNNGG	2 cut(s)	130, 1738
BsmAI	GTCTC	6 cut(s)	114, 143, 331, 1156, 1885, 2117
BsmBI	CGTCTC	1 cut(s)	114
BsmFI	GGGAC	2 cut(s)	255, 469
BsmI	GAATGC	1 cut(s)	1940
BsnI	GGCC	4 cut(s)	290, 959, 1461, 1805
BsoBI	CYCGRG	1 cut(s)	2120
Bsp119I	TTCGAA	1 cut(s)	1908
Bsp1286I	GDGCHC	1 cut(s)	837
Bsp1720I	GCTNAGC	1 cut(s)	573
Bsp19I	CCATGG	1 cut(s)	15
Bsp68I	TCGCGA	1 cut(s)	33
BspACI	CCGC	5 cut(s)	42, 99, 167, 194, 1039
BspANI	GGCC	4 cut(s)	290, 959, 1461, 1805
BspCNI	CTCAG	4 cut(s)	183, 1813, 2107, 2195
BspFNI	CGCG	4 cut(s)	33, 62, 78, 839
BspHI	TCATGA	1 cut(s)	1131
BspLI	GGNNCC	5 cut(s)	706, 1113, 1229, 1408, 2224
BspMAI	CTGCAG	1 cut(s)	2131
BspPI	GGATC	7 cut(s)	158, 422, 917, 1207, 1300, 1723, 1760
BspT104I	TTCGAA	1 cut(s)	1908
BspT107I	GGYRCC	1 cut(s)	2222
BspTI	CTTAAG	1 cut(s)	1967
BsrBI	CCGCTC	2 cut(s)	101, 169
BsrDI	GCAATG	2 cut(s)	1274, 1336
BsrI	ACTGG	5 cut(s)	323, 426, 785, 1890, 1967
BssECI	CCNNGG	2 cut(s)	15, 123
BssNAI	GTATAC	1 cut(s)	1760
BssNI	GRCGYC	1 cut(s)	545
BssT1I	CCWWGG	1 cut(s)	15
Bst1107I	GTATAC	1 cut(s)	1760
Bst2UI	CCWGG	2 cut(s)	125, 1439
Bst4CI	ACNGT	7 cut(s)	246, 521, 539, 884, 944, 1063, 1411
Bst6I	CTCTTC	1 cut(s)	441
BstACI	GRCGYC	1 cut(s)	545
BstAFI	CTTAAG	1 cut(s)	1967
BstBAI	YACGTR	2 cut(s)	821, 1763
BstBI	TTCGAA	1 cut(s)	1908
BstC8I	GCNNGC	4 cut(s)	528, 837, 854, 1567
BstDEI	CTNAG	8 cut(s)	170, 573, 691, 968, 1800, 2094, 2100, 2182
BstDSI	CCRYGG	1 cut(s)	15
BstF5I	GGATG	7 cut(s)	88, 1001, 1245, 1434, 1492, 1528, 2224
BstFNI	CGCG	4 cut(s)	33, 62, 78, 839
BstH2I	RGCGCY	1 cut(s)	895
BstHHI	GCGC	3 cut(s)	64, 80, 894
BstMAI	GTCTC	6 cut(s)	114, 143, 331, 1156, 1885, 2117
BstMWI	GCNNNNNNNGC	4 cut(s)	692, 853, 2009, 2135
BstNI	CCWGG	2 cut(s)	125, 1439
BstNSI	RCATGY	1 cut(s)	530
BstSCI	CCNGG	3 cut(s)	123, 485, 1437
BstSFI	CTRYAG	2 cut(s)	1360, 2127
BstUI	CGCG	4 cut(s)	33, 62, 78, 839
BstV1I	GCAGC	4 cut(s)	203, 1203, 1955, 2116
BstV2I	GAAGAC	4 cut(s)	231, 705, 878, 1656
BstX2I	RGATCY	6 cut(s)	427, 922, 1199, 1305, 1680, 1728
BstXI	CCANNNNNNTGG	1 cut(s)	16
BstYI	RGATCY	6 cut(s)	427, 922, 1199, 1305, 1680, 1728
BstZ17I	GTATAC	1 cut(s)	1760
BsuI	GTATCC	1 cut(s)	580
BsuRI	GGCC	4 cut(s)	290, 959, 1461, 1805
BtgI	CCRYGG	1 cut(s)	15
BtsCI	GGATG	7 cut(s)	88, 1001, 1245, 1434, 1492, 1528, 2224
BtsI	GCAGTG	1 cut(s)	320
BtsIMutI	CAGTG	5 cut(s)	305, 320, 1355, 1883, 1960
BtuMI	TCGCGA	1 cut(s)	33
Cac8I	GCNNGC	4 cut(s)	528, 837, 854, 1567
CaiI	CAGNNNCTG	1 cut(s)	1354
CciI	TCATGA	1 cut(s)	1131
CfoI	GCGC	3 cut(s)	64, 80, 894
Cfr13I	GGNCC	3 cut(s)	288, 958, 1804
CseI	GACGC	1 cut(s)	1343
Csp6I	GTAC	2 cut(s)	1178, 1471
CviAII	CATG	8 cut(s)	16, 494, 527, 866, 1132, 1233, 1738, 1811
CviQI	GTAC	2 cut(s)	1178, 1471
DdeI	CTNAG	8 cut(s)	170, 573, 691, 968, 1800, 2094, 2100, 2182
DraI	TTTAAA	1 cut(s)	1147
Eam1104I	CTCTTC	1 cut(s)	441
EarI	CTCTTC	1 cut(s)	441
Ecl136II	GAGCTC	1 cut(s)	835
Eco130I	CCWWGG	1 cut(s)	15
Eco147I	AGGCCT	1 cut(s)	1461
Eco24I	GRGCYC	1 cut(s)	837
Eco32I	GATATC	1 cut(s)	1047
Eco47III	AGCGCT	1 cut(s)	893
Eco53kI	GAGCTC	1 cut(s)	835
Eco57I	CTGAAG	6 cut(s)	717, 872, 1295, 1605, 1697, 2088
Eco88I	CYCGRG	1 cut(s)	2120
EcoICRI	GAGCTC	1 cut(s)	835
EcoO109I	RGGNCCY	1 cut(s)	1804
EcoRII	CCWGG	2 cut(s)	123, 1437
EcoRV	GATATC	1 cut(s)	1047
EcoT14I	CCWWGG	1 cut(s)	15
EcoT22I	ATGCAT	2 cut(s)	411, 1142
EcoT38I	GRGCYC	1 cut(s)	837
ErhI	CCWWGG	1 cut(s)	15
Esp3I	CGTCTC	1 cut(s)	114
FaeI	CATG	8 cut(s)	19, 497, 530, 869, 1135, 1236, 1741, 1814
FaqI	GGGAC	2 cut(s)	255, 469
FatI	CATG	8 cut(s)	15, 493, 526, 865, 1131, 1232, 1737, 1810
FauI	CCCGC	1 cut(s)	1032
FauNDI	CATATG	2 cut(s)	385, 1518
FbaI	TGATCA	2 cut(s)	85, 1345
FblI	GTMKAC	1 cut(s)	1759
Fnu4HI	GCNGC	4 cut(s)	192, 1217, 1944, 2105
FokI	GGATG	7 cut(s)	75, 1008, 1232, 1421, 1499, 1535, 2231
FriOI	GRGCYC	1 cut(s)	837
Fsp4HI	GCNGC	4 cut(s)	192, 1217, 1944, 2105
FspBI	CTAG	6 cut(s)	113, 201, 878, 1181, 1259, 2153
GlaI	GCGC	3 cut(s)	63, 79, 893
GluI	GCNGC	4 cut(s)	192, 1217, 1944, 2105
HaeII	RGCGCY	1 cut(s)	895
HaeIII	GGCC	4 cut(s)	290, 959, 1461, 1805
HapII	CCGG	1 cut(s)	487
HgaI	GACGC	1 cut(s)	1343
HhaI	GCGC	3 cut(s)	64, 80, 894
Hin1I	GRCGYC	1 cut(s)	545
Hin1II	CATG	8 cut(s)	19, 497, 530, 869, 1135, 1236, 1741, 1814
Hin6I	GCGC	3 cut(s)	62, 78, 892
HinP1I	GCGC	3 cut(s)	62, 78, 892
HincII	GTYRAC	1 cut(s)	342
HindII	GTYRAC	1 cut(s)	342
HindIII	AAGCTT	2 cut(s)	575, 1622
HinfI	GANTC	3 cut(s)	1322, 1844, 2180
HpaII	CCGG	1 cut(s)	487
HphI	GGTGA	6 cut(s)	110, 379, 910, 997, 1054, 1630
Hpy166II	GTNNAC	5 cut(s)	342, 1066, 1706, 1760, 1984
Hpy188III	TCNNGA	9 cut(s)	32, 161, 172, 201, 431, 878, 1132, 2120, 2122
Hpy8I	GTNNAC	5 cut(s)	342, 1066, 1706, 1760, 1984
Hpy99I	CGWCG	1 cut(s)	265
HpyAV	CCTTC	9 cut(s)	209, 1218, 1319, 1451, 1471, 1517, 1541, 1933, 2091
HpyCH4III	ACNGT	7 cut(s)	246, 521, 539, 884, 944, 1063, 1411
HpyCH4IV	ACGT	4 cut(s)	545, 820, 1762, 1861
HpyF10VI	GCNNNNNNNGC	4 cut(s)	692, 853, 2009, 2135
HpyF3I	CTNAG	8 cut(s)	170, 573, 691, 968, 1800, 2094, 2100, 2182
HpySE526I	ACGT	4 cut(s)	545, 820, 1762, 1861
Hsp92I	GRCGYC	1 cut(s)	545
Hsp92II	CATG	8 cut(s)	19, 497, 530, 869, 1135, 1236, 1741, 1814
HspAI	GCGC	3 cut(s)	62, 78, 892
Ksp22I	TGATCA	2 cut(s)	85, 1345
LmnI	GCTCC	5 cut(s)	106, 758, 832, 1186, 1213
Lsp1109I	GCAGC	4 cut(s)	203, 1203, 1955, 2116
LweI	GCATC	8 cut(s)	266, 300, 681, 748, 941, 1026, 1477, 1722
MaeI	CTAG	6 cut(s)	113, 201, 878, 1181, 1259, 2153
MaeII	ACGT	4 cut(s)	545, 820, 1762, 1861
MaeIII	GTNAC	5 cut(s)	489, 541, 720, 1365, 2071
MbiI	CCGCTC	2 cut(s)	101, 169
MflI	RGATCY	6 cut(s)	427, 922, 1199, 1305, 1680, 1728
MhlI	GDGCHC	1 cut(s)	837
MlyI	GAGTC	2 cut(s)	1331, 2174
MmeI	TCCRAC	3 cut(s)	33, 247, 1793
Mph1103I	ATGCAT	2 cut(s)	411, 1142
MroXI	GAANNNNTTC	1 cut(s)	1062
MseI	TTAA	8 cut(s)	297, 1014, 1146, 1691, 1919, 1928, 1968, 2007
MslI	CAYNNNNRTG	6 cut(s)	531, 984, 1521, 1616, 1815, 2166
MspA1I	CMGCKG	2 cut(s)	194, 1531
MspCI	CTTAAG	1 cut(s)	1967
MspI	CCGG	1 cut(s)	487
MspR9I	CCNGG	3 cut(s)	125, 487, 1439
Mva1269I	GAATGC	1 cut(s)	1940
MvaI	CCWGG	2 cut(s)	125, 1439
MvnI	CGCG	4 cut(s)	33, 62, 78, 839
MwoI	GCNNNNNNNGC	4 cut(s)	692, 853, 2009, 2135
NciI	CCSGG	1 cut(s)	487
NcoI	CCATGG	1 cut(s)	15
NdeI	CATATG	2 cut(s)	385, 1518
NlaIII	CATG	8 cut(s)	19, 497, 530, 869, 1135, 1236, 1741, 1814
NlaIV	GGNNCC	5 cut(s)	706, 1113, 1229, 1408, 2224
NmeAIII	GCCGAG	1 cut(s)	70
NmuCI	GTSAC	2 cut(s)	541, 2071
NruI	TCGCGA	1 cut(s)	33
NsiI	ATGCAT	2 cut(s)	411, 1142
NspI	RCATGY	1 cut(s)	530
NspV	TTCGAA	1 cut(s)	1908
PaeI	GCATGC	1 cut(s)	530
PaeR7I	CTCGAG	1 cut(s)	2120
PagI	TCATGA	1 cut(s)	1131
PceI	AGGCCT	1 cut(s)	1461
PctI	GAATGC	1 cut(s)	1940
PdmI	GAANNNNTTC	1 cut(s)	1062
PfeI	GAWTC	1 cut(s)	1844
PkrI	GCNGC	4 cut(s)	193, 1218, 1945, 2106
PleI	GAGTC	2 cut(s)	1330, 2174
PpsI	GAGTC	2 cut(s)	1330, 2174
Ppu21I	YACGTR	2 cut(s)	821, 1763
Psp124BI	GAGCTC	1 cut(s)	837
Psp6I	CCWGG	2 cut(s)	123, 1437
PspGI	CCWGG	2 cut(s)	123, 1437
PspN4I	GGNNCC	5 cut(s)	706, 1113, 1229, 1408, 2224
PspPI	GGNCC	3 cut(s)	288, 958, 1804
PstI	CTGCAG	1 cut(s)	2131
PstNI	CAGNNNCTG	1 cut(s)	1354
PsuI	RGATCY	6 cut(s)	427, 922, 1199, 1305, 1680, 1728
PvuII	CAGCTG	1 cut(s)	1531
RruI	TCGCGA	1 cut(s)	33
RsaI	GTAC	2 cut(s)	1179, 1472
RsaNI	GTAC	2 cut(s)	1178, 1471
RseI	CAYNNNNRTG	6 cut(s)	531, 984, 1521, 1616, 1815, 2166
SacI	GAGCTC	1 cut(s)	837
SaqAI	TTAA	8 cut(s)	297, 1014, 1146, 1691, 1919, 1928, 1968, 2007
SatI	GCNGC	4 cut(s)	192, 1217, 1944, 2105
Sau96I	GGNCC	3 cut(s)	288, 958, 1804
ScaI	AGTACT	1 cut(s)	1472
SchI	GAGTC	2 cut(s)	1331, 2174
ScrFI	CCNGG	3 cut(s)	125, 487, 1439
SduI	GDGCHC	1 cut(s)	837
SfaNI	GCATC	8 cut(s)	266, 300, 681, 748, 941, 1026, 1477, 1722
SfcI	CTRYAG	2 cut(s)	1360, 2127
Sfr274I	CTCGAG	1 cut(s)	2120
SfuI	TTCGAA	1 cut(s)	1908
SlaI	CTCGAG	1 cut(s)	2120
SmiMI	CAYNNNNRTG	6 cut(s)	531, 984, 1521, 1616, 1815, 2166
SmlI	CTYRAG	5 cut(s)	1291, 1572, 1967, 1987, 2120
SmoI	CTYRAG	5 cut(s)	1291, 1572, 1967, 1987, 2120
SpeI	ACTAGT	1 cut(s)	1180
SphI	GCATGC	1 cut(s)	530
SseBI	AGGCCT	1 cut(s)	1461
SsiI	CCGC	5 cut(s)	42, 99, 167, 194, 1039
SspMI	CTAG	6 cut(s)	113, 201, 878, 1181, 1259, 2153
SstI	GAGCTC	1 cut(s)	837
StuI	AGGCCT	1 cut(s)	1461
StyD4I	CCNGG	3 cut(s)	123, 485, 1437
StyI	CCWWGG	1 cut(s)	15
TaaI	ACNGT	7 cut(s)	246, 521, 539, 884, 944, 1063, 1411
TaiI	ACGT	4 cut(s)	548, 823, 1765, 1864
TaqI	TCGA	4 cut(s)	350, 871, 1908, 2121
TatI	WGTACW	2 cut(s)	1177, 1470
TfiI	GAWTC	1 cut(s)	1844
Tru1I	TTAA	8 cut(s)	297, 1014, 1146, 1691, 1919, 1928, 1968, 2007
Tru9I	TTAA	8 cut(s)	297, 1014, 1146, 1691, 1919, 1928, 1968, 2007
TscAI	CASTG	5 cut(s)	312, 320, 1355, 1890, 1967
TseFI	GTSAC	2 cut(s)	541, 2071
TseI	GCWGC	4 cut(s)	191, 1216, 1943, 2104
Tsp45I	GTSAC	2 cut(s)	541, 2071
TspDTI	ATGAA	5 cut(s)	264, 1148, 1470, 1605, 1833
TspGWI	ACGGA	3 cut(s)	647, 717, 1083
TspRI	CASTG	5 cut(s)	312, 320, 1355, 1890, 1967
Vha464I	CTTAAG	1 cut(s)	1967
XapI	RAATTY	6 cut(s)	271, 437, 1026, 1794, 1822, 2231
XbaI	TCTAGA	2 cut(s)	200, 877
XceI	RCATGY	1 cut(s)	530
XhoI	CTCGAG	1 cut(s)	2120
XmiI	GTMKAC	1 cut(s)	1759
XmnI	GAANNNNTTC	1 cut(s)	1062
XspI	CTAG	6 cut(s)	113, 201, 878, 1181, 1259, 2153
ZraI	GACGTC	1 cut(s)	546
ZrmI	AGTACT	1 cut(s)	1472
Zsp2I	ATGCAT	2 cut(s)	411, 1142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.