Rw5G025700

UPF0505 protein C16orf62 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0007890
Physical Location & Seq
Reverse (-)
36773067 .. 36781692
8626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G025700.1

Sequence Viewer

Length: 1830 bp
ATGGCCCATTGTTTTAGAAAGTTGCACTCTCATGATATAGGCTGTCTGCTCACCGGCGTTAATGACTTCAAAATTTTGTTGATGCGGGTGATATCGGCAAAGGAAACATTTCACAGAAACTTGACTGAAAACAAAAGATTGCTTATCAGTCTAATGGAACCAACCATTGATTATATCATGAAATGCATATTTAAAAATGTGTCCGAGAGACAGGTAAATGATGTACTAGTGGAGCTCGGGCTTGGATCTAATCAAGTGGAGCTGCGTGGAAGGTTCCCATGCGCCTCAATTATCCTTCATCATCTAGTCAAGCAACTTCCCTCGCAAGTAGTTAGCTCAAGTGCTATGGAGATCATTCAGCTCATTGAGTCCAGCAATGATGATTCCTATGATCAGTGCTTGAATTACAGGTTACTTGGATTTAGGCTGTGTGAAAGAAAATCTGAAATGGGCACTGTCAATGCTGTGGTGGACAAAATCATTCAGGTTATTACTCAATATGAAGGCCTTGATGAGTACTTGAAGGTTGTGGATGCTTATGTGGACATTTTCCTTCAAAATCATATGGATGACCACCTGAACTCCATTTTGGAAGGTATTTCAAACCGAGCTTGCAGTCAAGGGATTGCTGAAGATGAACTGACGACCTTGCAGTCTATCTTGGTGAAGCTTCTTTCTTATTACGAGGATTTACAAGACGTAATTGCTATGACCCCTTTTCTGAAGATCTTGGATTTAATGCATGGAAGTTCACAAAGCATCGTCAATATGCAGATCCTTGACATGGGGATAAGGAATGGTTATATACGTGATCGGACAACTATACAGTTTCTTTTTGAAATTTCCCAGGCTCTACATGATGATGAAATTTTTGTGAATGTAAAAGATGATTCTAACCAAGCAGCACGTTTGATTTCTTCTTTTGTCTCACTGGTTGATTATGGGGCAGAGTTGGAAAGTCATTTGACCTTCTTAGTTGAATGCCGTGCAGCTTTTGGTAGCATACACTGGCTTAAGGAAACACTTGTTCACTCGAGTAATTGTTTAGCAATTAAGGCTCTGAAAGATGGGAGTAGACATATCAGTTTTATCAAATCCTGCATAGCATTTTCTGAAGTCACATTACCTTCTATTTCAGCTCAGACTAAGCAGTTAAATCTGTATCTTGAGACTGCAGAGGTAGCCTTACTTGGTGATCTAGTTTCACATTCAGATGGACTGATTGACTCAGCAATCAACTCTTTGCAAATTTCAGAAGTGATGGATGGGTCCAGAACACCAATTGATGCTGATGGAATACTCTCCTCAATTCAAAAGTTATTCAGCCTCTTGGTTATGGTTCCAGGTAATCCTGAGCATGGAGTTACTTTCTATCCAAAGAACTTGGTATCGCTTGTAAATTCTCAGCCATGGATGCCACCAAGAATGAGAGTGAAGATTTTTTGTGCAGTTGTTTCTCTGTTAGCGGCACTATCTCAACGAGATCTGCCTTATCATGCAGATAAGGGAAAGCTTCTAGGAAACGACATCCTGTTCTTTGGTCATTCATCGTATTTAAGTGAGCTTGTCTTGATGTGCAAGTTTGTTCTTCAGAACCTGGTTGATACTATTCAACAAGAACCTTCCAAGGCTGCTCGTGGAAGTATGGCGCTTGAAGCTTGCAACTGCATTGCATCATCTTTCATTCCAAGTCAGGAAATATCCTCAATTTGCGCCAATCTAATAGAAACTGGAAGTCGTGTATGGGCACCAGCCACCCGTATCTGCTATCGACAATCAAATTTACGGATCAGTTACTGCTTCCTTCTATTGCAGTATGATGACATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps35

Protein Analysis

609

Amino Acids

68.19

Weight (kDa)

5.46

Isoelectric Point (pI)

39.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Vps35 PF03635 112 - 403 1.1e-07 Vacuolar protein sorting-associated protein 35
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 652
AccB1I GGYRCC 1 cut(s) 1747
AccI GTMKAC 1 cut(s) 1075
AciI CCGC 2 cut(s) 85, 1466
AclWI GGATC 3 cut(s) 253, 769, 1796
AcsI RAATTY 6 cut(s) 72, 840, 867, 1248, 1399, 1780
AcuI CTGAAG 4 cut(s) 651, 743, 1134, 1574
AfaI GTAC 2 cut(s) 225, 518
AfiI CCNNNNNNNGG 2 cut(s) 784, 1358
AflII CTTAAG 1 cut(s) 1013
AhlI ACTAGT 1 cut(s) 226
AjnI CCWGG 3 cut(s) 846, 1342, 1596
AjuI GAANNNNNNNTTGG 2 cut(s) 572, 604
Alw21I GWGCWC 1 cut(s) 237
Alw26I GTCTC 3 cut(s) 202, 931, 1163
AlwI GGATC 3 cut(s) 253, 769, 1796
AlwNI CAGNNNCTG 2 cut(s) 1597, 1797
Ama87I CYCGRG 2 cut(s) 236, 1033
AoxI GGCC 2 cut(s) 3, 505
ApeKI GCWGC 4 cut(s) 262, 902, 989, 1631
ApoI RAATTY 6 cut(s) 72, 840, 867, 1248, 1399, 1780
Asp700I GAANNNNTTC 1 cut(s) 108
AspLEI GCGC 3 cut(s) 284, 1651, 1715
AspS9I GGNCC 2 cut(s) 4, 1269
AsuHPI GGTGA 4 cut(s) 43, 100, 676, 1205
AvaI CYCGRG 2 cut(s) 236, 1033
AvaII GGWCC 1 cut(s) 1269
BaeGI GKGCMC 2 cut(s) 455, 1750
BanI GGYRCC 1 cut(s) 1747
BanII GRGCYC 1 cut(s) 237
BarI GAAGNNNNNNTAC 2 cut(s) 1107, 1139
BauI CACGAG 1 cut(s) 1635
Bbv12I GWGCWC 1 cut(s) 237
BbvI GCAGC 4 cut(s) 249, 914, 1001, 1618
BccI CCATC 5 cut(s) 1061, 1208, 1255, 1259, 1286
BceAI ACGGC 1 cut(s) 969
BciT130I CCWGG 3 cut(s) 848, 1344, 1598
BclI TGATCA 1 cut(s) 391
BcoDI GTCTC 3 cut(s) 202, 931, 1163
BcuI ACTAGT 1 cut(s) 226
BfaI CTAG 4 cut(s) 227, 305, 1199, 1517
BfmI CTRYAG 1 cut(s) 1173
BfoI RGCGCY 1 cut(s) 1652
BfrI CTTAAG 1 cut(s) 1013
BglII AGATCT 2 cut(s) 726, 1483
BisI GCNGC 5 cut(s) 263, 903, 990, 1467, 1632
BlsI GCNGC 5 cut(s) 264, 904, 991, 1468, 1633
BmcAI AGTACT 1 cut(s) 518
Bme1390I CCNGG 3 cut(s) 848, 1344, 1598
Bme18I GGWCC 1 cut(s) 1269
BmeT110I CYCGRG 2 cut(s) 236, 1033
BmgT120I GGNCC 2 cut(s) 4, 1269
BmiI GGNNCC 5 cut(s) 159, 275, 1270, 1341, 1749
BmrFI CCNGG 3 cut(s) 848, 1344, 1598
BmsI GCATC 6 cut(s) 72, 523, 768, 1276, 1404, 1682
Bpu10I CCTNAGC 1 cut(s) 1353
BpuEI CTTGAG 2 cut(s) 322, 1187
BsaAI YACGTR 1 cut(s) 809
BsaJI CCNNGG 3 cut(s) 846, 1409, 1626
BsaXI ACNNNNNCTCC 2 cut(s) 566, 596
Bsc4I CCNNNNNNNGG 2 cut(s) 784, 1358
Bse118I RCCGGY 1 cut(s) 53
Bse1I ACTGG 3 cut(s) 936, 1013, 1735
Bse3DI GCAATG 2 cut(s) 382, 1668
BseBI CCWGG 3 cut(s) 848, 1344, 1598
BseDI CCNNGG 3 cut(s) 846, 1409, 1626
BseGI GGATG 5 cut(s) 538, 574, 1270, 1419, 1527
BseLI CCNNNNNNNGG 2 cut(s) 784, 1358
BseMI GCAATG 2 cut(s) 382, 1668
BseMII CTCAG 4 cut(s) 1154, 1242, 1344, 1418
BseNI ACTGG 3 cut(s) 936, 1013, 1735
BseRI GAGGAG 1 cut(s) 1294
BseSI GKGCMC 2 cut(s) 455, 1750
BseXI GCAGC 4 cut(s) 249, 914, 1001, 1618
BsgI GTGCAG 2 cut(s) 1008, 1467
BshFI GGCC 2 cut(s) 5, 507
BshNI GGYRCC 1 cut(s) 1747
BsiHKAI GWGCWC 1 cut(s) 237
BsiHKCI CYCGRG 2 cut(s) 236, 1033
BsiSI CCGG 1 cut(s) 54
BslI CCNNNNNNNGG 2 cut(s) 784, 1358
BsmAI GTCTC 3 cut(s) 202, 931, 1163
BsmI GAATGC 1 cut(s) 986
BsnI GGCC 2 cut(s) 5, 507
BsoBI CYCGRG 2 cut(s) 236, 1033
Bsp1286I GDGCHC 3 cut(s) 237, 455, 1750
Bsp143I GATC 9 cut(s) 245, 351, 391, 726, 774, 811, 1195, 1483, 1788
Bsp19I CCATGG 1 cut(s) 1409
BspACI CCGC 2 cut(s) 85, 1466
BspANI GGCC 2 cut(s) 5, 507
BspCNI CTCAG 4 cut(s) 1153, 1241, 1345, 1417
BspHI TCATGA 2 cut(s) 31, 177
BspLI GGNNCC 5 cut(s) 159, 275, 1270, 1341, 1749
BspMAI CTGCAG 1 cut(s) 1177
BspPI GGATC 3 cut(s) 253, 769, 1796
BspT107I GGYRCC 1 cut(s) 1747
BspTI CTTAAG 1 cut(s) 1013
BsrDI GCAATG 2 cut(s) 382, 1668
BsrFI RCCGGY 1 cut(s) 53
BsrI ACTGG 3 cut(s) 936, 1013, 1735
BssAI RCCGGY 1 cut(s) 53
BssECI CCNNGG 3 cut(s) 846, 1409, 1626
BssMI GATC 9 cut(s) 245, 351, 391, 726, 774, 811, 1195, 1483, 1788
BssSI CACGAG 1 cut(s) 1635
BssT1I CCWWGG 2 cut(s) 1409, 1626
Bst2BI CACGAG 1 cut(s) 1635
Bst2UI CCWGG 3 cut(s) 848, 1344, 1598
Bst4CI ACNGT 2 cut(s) 457, 828
BstAFI CTTAAG 1 cut(s) 1013
BstBAI YACGTR 1 cut(s) 809
BstC8I GCNNGC 2 cut(s) 613, 1660
BstDEI CTNAG 6 cut(s) 973, 1140, 1146, 1228, 1353, 1404
BstDSI CCRYGG 1 cut(s) 1409
BstF5I GGATG 5 cut(s) 538, 574, 1270, 1419, 1527
BstH2I RGCGCY 1 cut(s) 1652
BstHHI GCGC 3 cut(s) 284, 1651, 1715
BstKTI GATC 9 cut(s) 248, 354, 394, 729, 777, 814, 1198, 1486, 1791
BstMAI GTCTC 3 cut(s) 202, 931, 1163
BstMBI GATC 9 cut(s) 245, 351, 391, 726, 774, 811, 1195, 1483, 1788
BstMWI GCNNNNNNNGC 4 cut(s) 1055, 1181, 1414, 1655
BstNI CCWGG 3 cut(s) 848, 1344, 1598
BstSCI CCNGG 3 cut(s) 846, 1342, 1596
BstSFI CTRYAG 1 cut(s) 1173
BstSLI GKGCMC 2 cut(s) 455, 1750
BstV1I GCAGC 4 cut(s) 249, 914, 1001, 1618
BstX2I RGATCY 4 cut(s) 245, 726, 774, 1483
BstYI RGATCY 4 cut(s) 245, 726, 774, 1483
BsuRI GGCC 2 cut(s) 5, 507
BtgI CCRYGG 1 cut(s) 1409
BtsCI GGATG 5 cut(s) 538, 574, 1270, 1419, 1527
BtsIMutI CAGTG 4 cut(s) 401, 453, 929, 1006
Cac8I GCNNGC 2 cut(s) 613, 1660
CaiI CAGNNNCTG 2 cut(s) 1597, 1797
CciI TCATGA 2 cut(s) 31, 177
CfoI GCGC 3 cut(s) 284, 1651, 1715
Cfr10I RCCGGY 1 cut(s) 53
Cfr13I GGNCC 2 cut(s) 4, 1269
CsiI ACCWGGT 1 cut(s) 1596
Csp6I GTAC 2 cut(s) 224, 517
CviAII CATG 9 cut(s) 32, 178, 279, 743, 784, 857, 1358, 1410, 1496
CviQI GTAC 2 cut(s) 224, 517
DdeI CTNAG 6 cut(s) 973, 1140, 1146, 1228, 1353, 1404
DpnI GATC 9 cut(s) 247, 353, 393, 728, 776, 813, 1197, 1485, 1790
DpnII GATC 9 cut(s) 245, 351, 391, 726, 774, 811, 1195, 1483, 1788
DraI TTTAAA 1 cut(s) 193
DrdI GACNNNNNNGTC 1 cut(s) 652
DseDI GACNNNNNNGTC 1 cut(s) 652
Ecl136II GAGCTC 1 cut(s) 235
Eco130I CCWWGG 2 cut(s) 1409, 1626
Eco147I AGGCCT 1 cut(s) 507
Eco24I GRGCYC 1 cut(s) 237
Eco32I GATATC 1 cut(s) 93
Eco47I GGWCC 1 cut(s) 1269
Eco53kI GAGCTC 1 cut(s) 235
Eco57I CTGAAG 4 cut(s) 651, 743, 1134, 1574
Eco88I CYCGRG 2 cut(s) 236, 1033
EcoICRI GAGCTC 1 cut(s) 235
EcoRII CCWGG 3 cut(s) 846, 1342, 1596
EcoRV GATATC 1 cut(s) 93
EcoT14I CCWWGG 2 cut(s) 1409, 1626
EcoT22I ATGCAT 2 cut(s) 188, 744
EcoT38I GRGCYC 1 cut(s) 237
ErhI CCWWGG 2 cut(s) 1409, 1626
FaeI CATG 9 cut(s) 35, 181, 282, 746, 787, 860, 1361, 1413, 1499
FatI CATG 9 cut(s) 31, 177, 278, 742, 783, 856, 1357, 1409, 1495
FauI CCCGC 1 cut(s) 78
FauNDI CATATG 2 cut(s) 564, 1826
FbaI TGATCA 1 cut(s) 391
FblI GTMKAC 1 cut(s) 1075
Fnu4HI GCNGC 5 cut(s) 263, 903, 990, 1467, 1632
FokI GGATG 5 cut(s) 545, 581, 1277, 1426, 1514
FriOI GRGCYC 1 cut(s) 237
Fsp4HI GCNGC 5 cut(s) 263, 903, 990, 1467, 1632
FspBI CTAG 4 cut(s) 227, 305, 1199, 1517
GlaI GCGC 3 cut(s) 283, 1650, 1714
GluI GCNGC 5 cut(s) 263, 903, 990, 1467, 1632
HaeII RGCGCY 1 cut(s) 1652
HaeIII GGCC 2 cut(s) 5, 507
HapII CCGG 1 cut(s) 54
HhaI GCGC 3 cut(s) 284, 1651, 1715
Hin1II CATG 9 cut(s) 35, 181, 282, 746, 787, 860, 1361, 1413, 1499
Hin6I GCGC 3 cut(s) 282, 1649, 1713
HinP1I GCGC 3 cut(s) 282, 1649, 1713
HindIII AAGCTT 3 cut(s) 668, 1511, 1656
HinfI GANTC 4 cut(s) 368, 383, 890, 1226
HpaII CCGG 1 cut(s) 54
HphI GGTGA 4 cut(s) 43, 100, 676, 1205
Hpy166II GTNNAC 5 cut(s) 472, 544, 752, 1030, 1076
Hpy188III TCNNGA 7 cut(s) 32, 178, 1166, 1272, 1352, 1570, 1694
Hpy8I GTNNAC 5 cut(s) 472, 544, 752, 1030, 1076
HpyCH4III ACNGT 2 cut(s) 457, 828
HpyCH4IV ACGT 3 cut(s) 699, 808, 907
HpyF10VI GCNNNNNNNGC 4 cut(s) 1055, 1181, 1414, 1655
HpyF3I CTNAG 6 cut(s) 973, 1140, 1146, 1228, 1353, 1404
HpySE526I ACGT 3 cut(s) 699, 808, 907
Hsp92II CATG 9 cut(s) 35, 181, 282, 746, 787, 860, 1361, 1413, 1499
HspAI GCGC 3 cut(s) 282, 1649, 1713
Ksp22I TGATCA 1 cut(s) 391
Kzo9I GATC 9 cut(s) 245, 351, 391, 726, 774, 811, 1195, 1483, 1788
LmnI GCTCC 2 cut(s) 232, 259
Lsp1109I GCAGC 4 cut(s) 249, 914, 1001, 1618
LweI GCATC 6 cut(s) 72, 523, 768, 1276, 1404, 1682
MabI ACCWGGT 1 cut(s) 1596
MaeI CTAG 4 cut(s) 227, 305, 1199, 1517
MaeII ACGT 3 cut(s) 699, 808, 907
MaeIII GTNAC 4 cut(s) 411, 1117, 1363, 1793
MalI GATC 9 cut(s) 247, 353, 393, 728, 776, 813, 1197, 1485, 1790
MboI GATC 9 cut(s) 245, 351, 391, 726, 774, 811, 1195, 1483, 1788
MboII GAAGA 5 cut(s) 644, 736, 909, 1447, 1580
MfeI CAATTG 1 cut(s) 1281
MflI RGATCY 4 cut(s) 245, 726, 774, 1483
MhlI GDGCHC 3 cut(s) 237, 455, 1750
MlyI GAGTC 2 cut(s) 377, 1220
MmeI TCCRAC 1 cut(s) 933
MnlI CCTC 7 cut(s) 295, 331, 679, 1171, 1315, 1337, 1714
Mph1103I ATGCAT 2 cut(s) 188, 744
MroXI GAANNNNTTC 1 cut(s) 108
MseI TTAA 7 cut(s) 60, 192, 737, 1014, 1053, 1154, 1556
MslI CAYNNNNRTG 4 cut(s) 30, 567, 861, 1212
MspCI CTTAAG 1 cut(s) 1013
MspI CCGG 1 cut(s) 54
MspR9I CCNGG 3 cut(s) 848, 1344, 1598
MunI CAATTG 1 cut(s) 1281
Mva1269I GAATGC 1 cut(s) 986
MvaI CCWGG 3 cut(s) 848, 1344, 1598
MwoI GCNNNNNNNGC 4 cut(s) 1055, 1181, 1414, 1655
NcoI CCATGG 1 cut(s) 1409
NdeI CATATG 2 cut(s) 564, 1826
NdeII GATC 9 cut(s) 245, 351, 391, 726, 774, 811, 1195, 1483, 1788
NlaIII CATG 9 cut(s) 35, 181, 282, 746, 787, 860, 1361, 1413, 1499
NlaIV GGNNCC 5 cut(s) 159, 275, 1270, 1341, 1749
NmuCI GTSAC 1 cut(s) 1117
NsiI ATGCAT 2 cut(s) 188, 744
PaeR7I CTCGAG 1 cut(s) 1033
PagI TCATGA 2 cut(s) 31, 177
PceI AGGCCT 1 cut(s) 507
PctI GAATGC 1 cut(s) 986
PdmI GAANNNNTTC 1 cut(s) 108
PfeI GAWTC 2 cut(s) 383, 890
PkrI GCNGC 5 cut(s) 264, 904, 991, 1468, 1633
PleI GAGTC 2 cut(s) 376, 1220
PpsI GAGTC 2 cut(s) 376, 1220
Ppu21I YACGTR 1 cut(s) 809
Psp124BI GAGCTC 1 cut(s) 237
Psp6I CCWGG 3 cut(s) 846, 1342, 1596
PspGI CCWGG 3 cut(s) 846, 1342, 1596
PspN4I GGNNCC 5 cut(s) 159, 275, 1270, 1341, 1749
PspPI GGNCC 2 cut(s) 4, 1269
PspXI VCTCGAGB 1 cut(s) 1033
PstI CTGCAG 1 cut(s) 1177
PstNI CAGNNNCTG 2 cut(s) 1597, 1797
PsuI RGATCY 4 cut(s) 245, 726, 774, 1483
RsaI GTAC 2 cut(s) 225, 518
RsaNI GTAC 2 cut(s) 224, 517
RseI CAYNNNNRTG 4 cut(s) 30, 567, 861, 1212
SacI GAGCTC 1 cut(s) 237
SaqAI TTAA 7 cut(s) 60, 192, 737, 1014, 1053, 1154, 1556
SatI GCNGC 5 cut(s) 263, 903, 990, 1467, 1632
Sau3AI GATC 9 cut(s) 245, 351, 391, 726, 774, 811, 1195, 1483, 1788
Sau96I GGNCC 2 cut(s) 4, 1269
ScaI AGTACT 1 cut(s) 518
SchI GAGTC 2 cut(s) 377, 1220
ScrFI CCNGG 3 cut(s) 848, 1344, 1598
SduI GDGCHC 3 cut(s) 237, 455, 1750
SexAI ACCWGGT 1 cut(s) 1596
SfaNI GCATC 6 cut(s) 72, 523, 768, 1276, 1404, 1682
SfcI CTRYAG 1 cut(s) 1173
Sfr274I CTCGAG 1 cut(s) 1033
SgrAI CRCCGGYG 1 cut(s) 53
SinI GGWCC 1 cut(s) 1269
SlaI CTCGAG 1 cut(s) 1033
SmiMI CAYNNNNRTG 4 cut(s) 30, 567, 861, 1212
SmlI CTYRAG 4 cut(s) 337, 1013, 1033, 1166
SmoI CTYRAG 4 cut(s) 337, 1013, 1033, 1166
SpeI ACTAGT 1 cut(s) 226
SseBI AGGCCT 1 cut(s) 507
SsiI CCGC 2 cut(s) 85, 1466
SspMI CTAG 4 cut(s) 227, 305, 1199, 1517
SstI GAGCTC 1 cut(s) 237
StuI AGGCCT 1 cut(s) 507
StyD4I CCNGG 3 cut(s) 846, 1342, 1596
StyI CCWWGG 2 cut(s) 1409, 1626
TaaI ACNGT 2 cut(s) 457, 828
TaiI ACGT 3 cut(s) 702, 811, 910
TaqI TCGA 2 cut(s) 1034, 1771
TatI WGTACW 2 cut(s) 223, 516
TauI GCSGC 1 cut(s) 1469
TfiI GAWTC 2 cut(s) 383, 890
Tru1I TTAA 7 cut(s) 60, 192, 737, 1014, 1053, 1154, 1556
Tru9I TTAA 7 cut(s) 60, 192, 737, 1014, 1053, 1154, 1556
TscAI CASTG 4 cut(s) 401, 460, 936, 1013
TseFI GTSAC 1 cut(s) 1117
TseI GCWGC 4 cut(s) 262, 902, 989, 1631
Tsp45I GTSAC 1 cut(s) 1117
TspDTI ATGAA 7 cut(s) 194, 287, 516, 651, 879, 1536, 1672
TspGWI ACGGA 1 cut(s) 1801
TspRI CASTG 4 cut(s) 401, 460, 936, 1013
Vha464I CTTAAG 1 cut(s) 1013
VpaK11BI GGWCC 1 cut(s) 1269
XapI RAATTY 6 cut(s) 72, 840, 867, 1248, 1399, 1780
XhoI CTCGAG 1 cut(s) 1033
XmiI GTMKAC 1 cut(s) 1075
XmnI GAANNNNTTC 1 cut(s) 108
XspI CTAG 4 cut(s) 227, 305, 1199, 1517
ZrmI AGTACT 1 cut(s) 518
Zsp2I ATGCAT 2 cut(s) 188, 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.