Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0007890

Physical Location & Seq

Genomic Coordinates Reverse (-)

36580250 .. 36592675

Gene Structure 12426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG273300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2757 bp

ATGGAGTTCAGACCTCGCAATTACACTGCCGAGAAACAAGCCCACGCGCTTCCTCGATCACGCGCCGACGATCATCCTCTCTCCGCTCCATCGTCTCCACCTCGCCACCAGGTTGAGGTTGTTGATGATGGGGACACCGACTATCTTGACCCGCTCAGAAGGTCAGATAACAATGCAGCAGTTTCTATAGAGGATTTGGAAGGCATTGAAGACAGTTCTGCTTCGGGACTCTCCAGTGAAGCTTCGATTCAAAATCCATCAAAAGAATGGGTCTCTTTTAAGAGGTCACTGATGCAGCGGTTTCCGGTCTCCAAAACCGTTTTGACTTCTTCAATGTCCGATGTGATAGTGAAAGGCAGGAAAACATTTGACAAATCTTCAACAAATATGCATTTGGAGGAACTGGAAGATCCAGAAAAATTTGCAGAAGAGGGTGGTAAAGTCATCACAGGACAGGAATATGTTTCCCGGTTACACGAGCTCAAAGCTGAAATAAATCACACTTGGCATGCTGATGATCGTGTGACATCTTTGAAATTATCAATAAAAGTAGCTAAGCTTTTGATGGATACATCTATTTTACAATGTTATCCTACACTTTTTGTTCTTGCTACGGATATTATGGATATGCTTGGGGATATGGTGTGGGAACGCATCAAGTTGAAAGCTGAATTAGCTGAAGATGGAACCAAACTCTGCTTGTTACCAGAGAACTTCATGGCGAGTGATATTTGCTCCGATGCCAAAGAAACTTGCAATAATTGGTTCAGCAAAATTGGTGCAATCCGAGAGCTTCTTCCACGTATTTATTTGGAGCTCGCATTATTGCCTTGCTGGCGTTTCTTGCATGATCGACCTCTAGACTGTCTTCAGCGCTTGGTAATGATGACAAGAGGGTTAGCAGATCCATTGGCATCTGCCTACTGTCGCTTGTATATGGCCCATTGTTTTAGAAAGTTGCACTCTCATGATATAGGATGTCTGCTCACCTGCGTTAATGACTTCAAAATTTTGTTGATGCGGGTGATATCGGCAAAGGAAACATTTCACAGAAAGTTGACTGAAAACAAAAGATTGCTTATCAGTCTAATGGAACCAACCATTGATTATATCATGAAATGCATATTTAAAAATGTGTCCGAGAGACAGGTAAATGATGTACTAGTGGAGCTTGGGCTTGGATCTAATCAAGTGGAGCTGCGTGGAAGGTTCCCATGCGCCTCAATTATCCTTCATCATCTAGTCAAGCAACTTCCCTCGCAAGTAGTTAGCTCAAGTGCTATGGAGATCATTCAGCTCATTGAGTCCAGCAATGATGATTCCTATGATCAGTGCTTGAATTACAGGTTACTTGGATTTAGGCTGTGTGAAAGAAAATCTGAAATGGGCACTGTCAATGCTGTGGTGGACAAAATCATTCAGGTTATTACTCAATATGAAGGCCTTGATGAGTACTTGAAGGTTGTGGATGCTTATGTGGACATTTTCCTTCAAAATCATATGGATGACCACCTGAACTCCATTTTGGAAGGTATTTCAAACCGAGCATGCAGTCAAGGGATTGCTGAAGATGAACTGACGACCTTGCAGTCTATCTTGGTGAAGCTTCTTTCTTATTACGAGGATTTACAAGACGTAATTGCTATGACCCCTTTTCTGAAGATCTTGGATTTAATGCATGGAAGTTCACAAAGCATCGTCAATATGCAGATCCTTGACATGGGGATAAGGAATGGTTATATACGTGATCGGACAACTATACAGTTTCTTTTTGAAATTTCCCAGGCTCTACATGATGATGAAATTTTTGTGAATGTAAAAGATGATTCTAACCAAGCAGCACGTTTGATTTCTTCTTTTGTCTCACTGGTTGATTATGGGGGAGAGTTGGAAAGTCATTTGACCTTCTTAGTTGAATGCCGTGCAGCTTTTGGTAGCATACACTGGCTTAAGGAAACGCTTGTTCACTCGAGTAATTGTTTAGCAATTAAGGCTCTGAAAGATGGGAGTAGACATATCAGTTTTATCAAATCCTGCATAGCATTTTCTGAAGTCACATTACCTTCTATTTCAGCTCAGACTAAGCAGTTAAATCTGTATCTTGAGACTGCAGAGGTAGCCTTACTTGGTGGTCTAGTTTCACATTCAGATGGACTGATTGACTCAGCAATCAACTCTTTGCAAATTTCAGAAGTGATGGATGGGTCCAGAACACCAATTGATGCTGATGGAATACTCTCCTCAATTCTAAAGTTATTCAGCCTCTTGGTTATGGTTCCAGGTAATCCTGAGCATGGAGTTACTTTCTATCCAAAGAACTTGGTATCGCTTGTAAATTCTCAGCCATGGATGCCACCAAGAATGAGAGTGAAGATTTTTTGTGCAGTTGTTTCTCTGTTGGCGGCACTATCTCAACGAGATCTGCCTTATCATGCAGATAAGGGAAAGCTTCTAGGAAACGACATATTGTTCTTTGGTCATTCATCGTATTTAAGTGAGCTTGCCTTGATGTGCAAGTTTGTTCTTCAGAACCTGGTTGATACTATTCAACAAGAACCTTCCAAGGCTGCTCGTGGAAGTATGGCGCTTGAAGCTTGCAACTGCATTGCATCATCTTTCATTCCAAGTCAGGAAATATCCTCAATTTGCGCCAATCTAATAGAAACTGGGAAGTCGTGTATGGGCACCAGCCACCCGTATCTGCTATCGACAATCAAATTTACTGATCAGTTACTGCTTCCTTCTATTGCAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps35

Protein Analysis

918

Amino Acids

102.75

Weight (kDa)

5.46

Isoelectric Point (pI)

39.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50730 AT1G50730 AT1G50730
fragaria_vesca	FvH4_3g23170
malus_domestica	MD03G1197400.v1.1
prunus_persica	Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1
pyrus_communis	pycom03g14870
rosa_chinensis	RchiOBHm_Chr5g0040821
rosa_laevigata	RLG00000034005
rosa_multiflora	Rmu_sc0001579.1_g000005
rosa_roxburghii	Rroxscaffold_1G00039880
rosa_rugosa	Rorug05G0187900
rosa_samantha	Rh5AG273300 Rh5BG278500 Rh5CG310500 Rh5DG286400
rosa_wichuraiana	Rw5G025700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	998
AasI	GACNNNNNNGTC	1 cut(s)	1588
Acc36I	ACCTGC	1 cut(s)	998
AccB1I	GGYRCC	1 cut(s)	2684
AccBSI	CCGCTC	2 cut(s)	86, 154
AccI	GTMKAC	1 cut(s)	2011
AccII	CGCG	2 cut(s)	47, 63
AciI	CCGC	5 cut(s)	84, 152, 298, 1021, 2402
AclWI	GGATC	4 cut(s)	404, 899, 1189, 1705
AcsI	RAATTY	7 cut(s)	419, 1008, 1776, 1803, 2184, 2335, 2717
AcuI	CTGAAG	6 cut(s)	699, 854, 1587, 1679, 2070, 2510
AfaI	GTAC	2 cut(s)	1161, 1454
AfeI	AGCGCT	1 cut(s)	875
AfiI	CCNNNNNNNGG	3 cut(s)	115, 1720, 2294
AflII	CTTAAG	1 cut(s)	1949
AhlI	ACTAGT	1 cut(s)	1162
AjnI	CCWGG	4 cut(s)	108, 1782, 2278, 2532
AjuI	GAANNNNNNNTTGG	2 cut(s)	1508, 1540
Alw21I	GWGCWC	2 cut(s)	483, 819
Alw26I	GTCTC	6 cut(s)	99, 277, 313, 1138, 1867, 2099
AlwI	GGATC	4 cut(s)	404, 899, 1189, 1705
AlwNI	CAGNNNCTG	2 cut(s)	2533, 2734
Ama87I	CYCGRG	1 cut(s)	1969
Aor51HI	AGCGCT	1 cut(s)	875
AoxI	GGCC	2 cut(s)	939, 1441
ApeKI	GCWGC	6 cut(s)	176, 295, 1198, 1838, 1925, 2567
ApoI	RAATTY	7 cut(s)	419, 1008, 1776, 1803, 2184, 2335, 2717
Asp700I	GAANNNNTTC	1 cut(s)	1044
AspLEI	GCGC	6 cut(s)	49, 65, 876, 1220, 2587, 2651
AspS9I	GGNCC	2 cut(s)	940, 2205
AsuC2I	CCSGG	1 cut(s)	469
AsuHPI	GGTGA	3 cut(s)	979, 1036, 1612
AvaI	CYCGRG	1 cut(s)	1969
AvaII	GGWCC	1 cut(s)	2205
BaeGI	GKGCMC	2 cut(s)	1391, 2687
BanI	GGYRCC	1 cut(s)	2684
BanII	GRGCYC	2 cut(s)	483, 819
BarI	GAAGNNNNNNTAC	2 cut(s)	2043, 2075
BauI	CACGAG	2 cut(s)	476, 2571
BbsI	GAAGAC	2 cut(s)	216, 860
Bbv12I	GWGCWC	2 cut(s)	483, 819
BbvI	GCAGC	6 cut(s)	188, 307, 1185, 1850, 1937, 2554
BceAI	ACGGC	1 cut(s)	1905
BciT130I	CCWGG	4 cut(s)	110, 1784, 2280, 2534
BciVI	GTATCC	1 cut(s)	562
BclI	TGATCA	2 cut(s)	1327, 2725
BcnI	CCSGG	1 cut(s)	469
BcoDI	GTCTC	6 cut(s)	99, 277, 313, 1138, 1867, 2099
BcuI	ACTAGT	1 cut(s)	1162
BfaI	CTAG	5 cut(s)	860, 1163, 1241, 2135, 2453
BfmI	CTRYAG	2 cut(s)	186, 2109
BfoI	RGCGCY	2 cut(s)	877, 2588
BfrI	CTTAAG	1 cut(s)	1949
BfuAI	ACCTGC	1 cut(s)	998
BfuI	GTATCC	1 cut(s)	562
BglI	GCCNNNNNGGC	1 cut(s)	835
BglII	AGATCT	2 cut(s)	1662, 2419
BisI	GCNGC	7 cut(s)	177, 296, 1199, 1839, 1926, 2403, 2568
BlpI	GCTNAGC	1 cut(s)	555
BlsI	GCNGC	7 cut(s)	178, 297, 1200, 1840, 1927, 2404, 2569
BmcAI	AGTACT	1 cut(s)	1454
Bme1390I	CCNGG	5 cut(s)	110, 469, 1784, 2280, 2534
Bme18I	GGWCC	1 cut(s)	2205
BmeT110I	CYCGRG	1 cut(s)	1969
BmgT120I	GGNCC	2 cut(s)	940, 2205
BmiI	GGNNCC	6 cut(s)	688, 1095, 1211, 2206, 2277, 2686
BmrFI	CCNGG	5 cut(s)	110, 469, 1784, 2280, 2534
BmrI	ACTGGG	1 cut(s)	2676
BmuI	ACTGGG	1 cut(s)	2676
BpiI	GAAGAC	2 cut(s)	216, 860
BpmI	CTGGAG	1 cut(s)	217
Bpu10I	CCTNAGC	1 cut(s)	2289
Bpu1102I	GCTNAGC	1 cut(s)	555
BpuEI	CTTGAG	2 cut(s)	1258, 2123
BpuMI	CCSGG	1 cut(s)	469
BsaAI	YACGTR	2 cut(s)	803, 1745
BsaI	GGTCTC	2 cut(s)	277, 313
BsaJI	CCNNGG	3 cut(s)	1782, 2345, 2562
BsaWI	WCCGGW	1 cut(s)	304
BsaXI	ACNNNNNCTCC	2 cut(s)	1502, 1532
Bsc4I	CCNNNNNNNGG	3 cut(s)	115, 1720, 2294
Bse1I	ACTGG	5 cut(s)	234, 408, 1872, 1949, 2671
Bse3DI	GCAATG	2 cut(s)	1318, 2604
BseBI	CCWGG	4 cut(s)	110, 1784, 2280, 2534
BseDI	CCNNGG	3 cut(s)	1782, 2345, 2562
BseGI	GGATG	6 cut(s)	73, 983, 1474, 1510, 2206, 2355
BseLI	CCNNNNNNNGG	3 cut(s)	115, 1720, 2294
BseMI	GCAATG	2 cut(s)	1318, 2604
BseMII	CTCAG	5 cut(s)	169, 2090, 2178, 2280, 2354
BseNI	ACTGG	5 cut(s)	234, 408, 1872, 1949, 2671
BseRI	GAGGAG	1 cut(s)	2230
BseSI	GKGCMC	2 cut(s)	1391, 2687
BseXI	GCAGC	6 cut(s)	188, 307, 1185, 1850, 1937, 2554
BsgI	GTGCAG	2 cut(s)	1944, 2403
Bsh1236I	CGCG	2 cut(s)	47, 63
BshFI	GGCC	2 cut(s)	941, 1443
BshNI	GGYRCC	1 cut(s)	2684
BsiHKAI	GWGCWC	2 cut(s)	483, 819
BsiHKCI	CYCGRG	1 cut(s)	1969
BsiSI	CCGG	2 cut(s)	305, 469
BslFI	GGGAC	2 cut(s)	146, 240
BslI	CCNNNNNNNGG	3 cut(s)	115, 1720, 2294
BsmAI	GTCTC	6 cut(s)	99, 277, 313, 1138, 1867, 2099
BsmBI	CGTCTC	1 cut(s)	99
BsmFI	GGGAC	2 cut(s)	146, 240
BsmI	GAATGC	1 cut(s)	1922
BsnI	GGCC	2 cut(s)	941, 1443
Bso31I	GGTCTC	2 cut(s)	277, 313
BsoBI	CYCGRG	1 cut(s)	1969
Bsp1286I	GDGCHC	4 cut(s)	483, 819, 1391, 2687
Bsp1720I	GCTNAGC	1 cut(s)	555
Bsp19I	CCATGG	1 cut(s)	2345
BspACI	CCGC	5 cut(s)	84, 152, 298, 1021, 2402
BspANI	GGCC	2 cut(s)	941, 1443
BspCNI	CTCAG	5 cut(s)	168, 2089, 2177, 2281, 2353
BspFNI	CGCG	2 cut(s)	47, 63
BspHI	TCATGA	2 cut(s)	967, 1113
BspLI	GGNNCC	6 cut(s)	688, 1095, 1211, 2206, 2277, 2686
BspMAI	CTGCAG	1 cut(s)	2113
BspMI	ACCTGC	1 cut(s)	998
BspPI	GGATC	4 cut(s)	404, 899, 1189, 1705
BspT107I	GGYRCC	1 cut(s)	2684
BspTI	CTTAAG	1 cut(s)	1949
BspTNI	GGTCTC	2 cut(s)	277, 313
BsrBI	CCGCTC	2 cut(s)	86, 154
BsrDI	GCAATG	2 cut(s)	1318, 2604
BsrI	ACTGG	5 cut(s)	234, 408, 1872, 1949, 2671
BssECI	CCNNGG	3 cut(s)	1782, 2345, 2562
BssSI	CACGAG	2 cut(s)	476, 2571
BssT1I	CCWWGG	2 cut(s)	2345, 2562
Bst2BI	CACGAG	2 cut(s)	476, 2571
Bst2UI	CCWGG	4 cut(s)	110, 1784, 2280, 2534
Bst4CI	ACNGT	6 cut(s)	215, 319, 866, 926, 1393, 1764
Bst6I	CTCTTC	1 cut(s)	423
BstAFI	CTTAAG	1 cut(s)	1949
BstBAI	YACGTR	2 cut(s)	803, 1745
BstC8I	GCNNGC	6 cut(s)	510, 819, 836, 1549, 2502, 2596
BstDEI	CTNAG	8 cut(s)	155, 555, 1909, 2076, 2082, 2164, 2289, 2340
BstDSI	CCRYGG	1 cut(s)	2345
BstF5I	GGATG	6 cut(s)	73, 983, 1474, 1510, 2206, 2355
BstFNI	CGCG	2 cut(s)	47, 63
BstH2I	RGCGCY	2 cut(s)	877, 2588
BstHHI	GCGC	6 cut(s)	49, 65, 876, 1220, 2587, 2651
BstMAI	GTCTC	6 cut(s)	99, 277, 313, 1138, 1867, 2099
BstMWI	GCNNNNNNNGC	7 cut(s)	674, 835, 844, 1991, 2117, 2350, 2591
BstNI	CCWGG	4 cut(s)	110, 1784, 2280, 2534
BstNSI	RCATGY	2 cut(s)	512, 1551
BstSCI	CCNGG	5 cut(s)	108, 467, 1782, 2278, 2532
BstSFI	CTRYAG	2 cut(s)	186, 2109
BstSLI	GKGCMC	2 cut(s)	1391, 2687
BstUI	CGCG	2 cut(s)	47, 63
BstV1I	GCAGC	6 cut(s)	188, 307, 1185, 1850, 1937, 2554
BstV2I	GAAGAC	2 cut(s)	216, 860
BstX2I	RGATCY	6 cut(s)	409, 904, 1181, 1662, 1710, 2419
BstYI	RGATCY	6 cut(s)	409, 904, 1181, 1662, 1710, 2419
BsuI	GTATCC	1 cut(s)	562
BsuRI	GGCC	2 cut(s)	941, 1443
BtgI	CCRYGG	1 cut(s)	2345
BtsCI	GGATG	6 cut(s)	73, 983, 1474, 1510, 2206, 2355
BtsI	GCAGTG	1 cut(s)	24
BtsIMutI	CAGTG	7 cut(s)	24, 241, 287, 1337, 1389, 1865, 1942
BveI	ACCTGC	1 cut(s)	998
Cac8I	GCNNGC	6 cut(s)	510, 819, 836, 1549, 2502, 2596
CaiI	CAGNNNCTG	2 cut(s)	2533, 2734
CciI	TCATGA	2 cut(s)	967, 1113
CfoI	GCGC	6 cut(s)	49, 65, 876, 1220, 2587, 2651
Cfr13I	GGNCC	2 cut(s)	940, 2205
CsiI	ACCWGGT	2 cut(s)	108, 2532
Csp6I	GTAC	2 cut(s)	1160, 1453
CviQI	GTAC	2 cut(s)	1160, 1453
DdeI	CTNAG	8 cut(s)	155, 555, 1909, 2076, 2082, 2164, 2289, 2340
DraI	TTTAAA	1 cut(s)	1129
DrdI	GACNNNNNNGTC	1 cut(s)	1588
DseDI	GACNNNNNNGTC	1 cut(s)	1588
Eam1104I	CTCTTC	1 cut(s)	423
EarI	CTCTTC	1 cut(s)	423
Ecl136II	GAGCTC	2 cut(s)	481, 817
Eco130I	CCWWGG	2 cut(s)	2345, 2562
Eco147I	AGGCCT	1 cut(s)	1443
Eco24I	GRGCYC	2 cut(s)	483, 819
Eco31I	GGTCTC	2 cut(s)	277, 313
Eco32I	GATATC	1 cut(s)	1029
Eco47I	GGWCC	1 cut(s)	2205
Eco47III	AGCGCT	1 cut(s)	875
Eco53kI	GAGCTC	2 cut(s)	481, 817
Eco57I	CTGAAG	6 cut(s)	699, 854, 1587, 1679, 2070, 2510
Eco88I	CYCGRG	1 cut(s)	1969
EcoICRI	GAGCTC	2 cut(s)	481, 817
EcoRII	CCWGG	4 cut(s)	108, 1782, 2278, 2532
EcoRV	GATATC	1 cut(s)	1029
EcoT14I	CCWWGG	2 cut(s)	2345, 2562
EcoT22I	ATGCAT	3 cut(s)	393, 1124, 1680
EcoT38I	GRGCYC	2 cut(s)	483, 819
ErhI	CCWWGG	2 cut(s)	2345, 2562
Esp3I	CGTCTC	1 cut(s)	99
FaqI	GGGAC	2 cut(s)	146, 240
FauI	CCCGC	2 cut(s)	159, 1014
FauNDI	CATATG	1 cut(s)	1500
FbaI	TGATCA	2 cut(s)	1327, 2725
FblI	GTMKAC	1 cut(s)	2011
Fnu4HI	GCNGC	7 cut(s)	177, 296, 1199, 1839, 1926, 2403, 2568
FokI	GGATG	6 cut(s)	60, 990, 1481, 1517, 2213, 2362
FriOI	GRGCYC	2 cut(s)	483, 819
Fsp4HI	GCNGC	7 cut(s)	177, 296, 1199, 1839, 1926, 2403, 2568
FspBI	CTAG	5 cut(s)	860, 1163, 1241, 2135, 2453
GlaI	GCGC	6 cut(s)	48, 64, 875, 1219, 2586, 2650
GluI	GCNGC	7 cut(s)	177, 296, 1199, 1839, 1926, 2403, 2568
GsuI	CTGGAG	1 cut(s)	217
HaeII	RGCGCY	2 cut(s)	877, 2588
HaeIII	GGCC	2 cut(s)	941, 1443
HapII	CCGG	2 cut(s)	305, 469
HhaI	GCGC	6 cut(s)	49, 65, 876, 1220, 2587, 2651
Hin6I	GCGC	6 cut(s)	47, 63, 874, 1218, 2585, 2649
HinP1I	GCGC	6 cut(s)	47, 63, 874, 1218, 2585, 2649
HincII	GTYRAC	1 cut(s)	1059
HindII	GTYRAC	1 cut(s)	1059
HindIII	AAGCTT	5 cut(s)	240, 557, 1604, 2447, 2592
HinfI	GANTC	6 cut(s)	228, 247, 1304, 1319, 1826, 2162
HpaII	CCGG	2 cut(s)	305, 469
HphI	GGTGA	3 cut(s)	979, 1036, 1612
Hpy166II	GTNNAC	6 cut(s)	1059, 1408, 1480, 1688, 1966, 2012
Hpy8I	GTNNAC	6 cut(s)	1059, 1408, 1480, 1688, 1966, 2012
Hpy99I	CGWCG	1 cut(s)	71
HpyCH4III	ACNGT	6 cut(s)	215, 319, 866, 926, 1393, 1764
HpyCH4IV	ACGT	4 cut(s)	802, 1635, 1744, 1843
HpyF10VI	GCNNNNNNNGC	7 cut(s)	674, 835, 844, 1991, 2117, 2350, 2591
HpyF3I	CTNAG	8 cut(s)	155, 555, 1909, 2076, 2082, 2164, 2289, 2340
HpySE526I	ACGT	4 cut(s)	802, 1635, 1744, 1843
HspAI	GCGC	6 cut(s)	47, 63, 874, 1218, 2585, 2649
Ksp22I	TGATCA	2 cut(s)	1327, 2725
LmnI	GCTCC	5 cut(s)	91, 740, 814, 1168, 1195
Lsp1109I	GCAGC	6 cut(s)	188, 307, 1185, 1850, 1937, 2554
MabI	ACCWGGT	2 cut(s)	108, 2532
MaeI	CTAG	5 cut(s)	860, 1163, 1241, 2135, 2453
MaeII	ACGT	4 cut(s)	802, 1635, 1744, 1843
MaeIII	GTNAC	8 cut(s)	285, 471, 523, 702, 1347, 2053, 2299, 2730
MbiI	CCGCTC	2 cut(s)	86, 154
MfeI	CAATTG	1 cut(s)	2217
MflI	RGATCY	6 cut(s)	409, 904, 1181, 1662, 1710, 2419
MhlI	GDGCHC	4 cut(s)	483, 819, 1391, 2687
MlyI	GAGTC	3 cut(s)	222, 1313, 2156
MmeI	TCCRAC	1 cut(s)	1869
Mph1103I	ATGCAT	3 cut(s)	393, 1124, 1680
MroXI	GAANNNNTTC	1 cut(s)	1044
MseI	TTAA	8 cut(s)	279, 996, 1128, 1673, 1950, 1989, 2090, 2492
MslI	CAYNNNNRTG	5 cut(s)	513, 966, 1503, 1797, 2148
MspA1I	CMGCKG	1 cut(s)	298
MspCI	CTTAAG	1 cut(s)	1949
MspI	CCGG	2 cut(s)	305, 469
MspR9I	CCNGG	5 cut(s)	110, 469, 1784, 2280, 2534
MunI	CAATTG	1 cut(s)	2217
Mva1269I	GAATGC	1 cut(s)	1922
MvaI	CCWGG	4 cut(s)	110, 1784, 2280, 2534
MvnI	CGCG	2 cut(s)	47, 63
MwoI	GCNNNNNNNGC	7 cut(s)	674, 835, 844, 1991, 2117, 2350, 2591
NciI	CCSGG	1 cut(s)	469
NcoI	CCATGG	1 cut(s)	2345
NdeI	CATATG	1 cut(s)	1500
NlaIV	GGNNCC	6 cut(s)	688, 1095, 1211, 2206, 2277, 2686
NmeAIII	GCCGAG	1 cut(s)	55
NmuCI	GTSAC	3 cut(s)	285, 523, 2053
NsiI	ATGCAT	3 cut(s)	393, 1124, 1680
NspI	RCATGY	2 cut(s)	512, 1551
PaeI	GCATGC	2 cut(s)	512, 1551
PaeR7I	CTCGAG	1 cut(s)	1969
PagI	TCATGA	2 cut(s)	967, 1113
PaqCI	CACCTGC	1 cut(s)	998
PceI	AGGCCT	1 cut(s)	1443
PctI	GAATGC	1 cut(s)	1922
PdmI	GAANNNNTTC	1 cut(s)	1044
PfeI	GAWTC	3 cut(s)	247, 1319, 1826
PkrI	GCNGC	7 cut(s)	178, 297, 1200, 1840, 1927, 2404, 2569
PleI	GAGTC	3 cut(s)	222, 1312, 2156
PpsI	GAGTC	3 cut(s)	222, 1312, 2156
Ppu21I	YACGTR	2 cut(s)	803, 1745
Psp124BI	GAGCTC	2 cut(s)	483, 819
Psp6I	CCWGG	4 cut(s)	108, 1782, 2278, 2532
PspGI	CCWGG	4 cut(s)	108, 1782, 2278, 2532
PspN4I	GGNNCC	6 cut(s)	688, 1095, 1211, 2206, 2277, 2686
PspPI	GGNCC	2 cut(s)	940, 2205
PspXI	VCTCGAGB	1 cut(s)	1969
PstI	CTGCAG	1 cut(s)	2113
PstNI	CAGNNNCTG	2 cut(s)	2533, 2734
PsuI	RGATCY	6 cut(s)	409, 904, 1181, 1662, 1710, 2419
RsaI	GTAC	2 cut(s)	1161, 1454
RsaNI	GTAC	2 cut(s)	1160, 1453
RseI	CAYNNNNRTG	5 cut(s)	513, 966, 1503, 1797, 2148
SacI	GAGCTC	2 cut(s)	483, 819
SaqAI	TTAA	8 cut(s)	279, 996, 1128, 1673, 1950, 1989, 2090, 2492
SatI	GCNGC	7 cut(s)	177, 296, 1199, 1839, 1926, 2403, 2568
Sau96I	GGNCC	2 cut(s)	940, 2205
ScaI	AGTACT	1 cut(s)	1454
SchI	GAGTC	3 cut(s)	222, 1313, 2156
ScrFI	CCNGG	5 cut(s)	110, 469, 1784, 2280, 2534
SduI	GDGCHC	4 cut(s)	483, 819, 1391, 2687
SexAI	ACCWGGT	2 cut(s)	108, 2532
SfcI	CTRYAG	2 cut(s)	186, 2109
Sfr274I	CTCGAG	1 cut(s)	1969
SinI	GGWCC	1 cut(s)	2205
SlaI	CTCGAG	1 cut(s)	1969
SmiMI	CAYNNNNRTG	5 cut(s)	513, 966, 1503, 1797, 2148
SmlI	CTYRAG	4 cut(s)	1273, 1949, 1969, 2102
SmoI	CTYRAG	4 cut(s)	1273, 1949, 1969, 2102
SpeI	ACTAGT	1 cut(s)	1162
SphI	GCATGC	2 cut(s)	512, 1551
SseBI	AGGCCT	1 cut(s)	1443
SsiI	CCGC	5 cut(s)	84, 152, 298, 1021, 2402
SspMI	CTAG	5 cut(s)	860, 1163, 1241, 2135, 2453
SstI	GAGCTC	2 cut(s)	483, 819
StuI	AGGCCT	1 cut(s)	1443
StyD4I	CCNGG	5 cut(s)	108, 467, 1782, 2278, 2532
StyI	CCWWGG	2 cut(s)	2345, 2562
TaaI	ACNGT	6 cut(s)	215, 319, 866, 926, 1393, 1764
TaiI	ACGT	4 cut(s)	805, 1638, 1747, 1846
TaqI	TCGA	5 cut(s)	55, 245, 853, 1970, 2708
TatI	WGTACW	2 cut(s)	1159, 1452
TauI	GCSGC	1 cut(s)	2405
TfiI	GAWTC	3 cut(s)	247, 1319, 1826
Tru1I	TTAA	8 cut(s)	279, 996, 1128, 1673, 1950, 1989, 2090, 2492
Tru9I	TTAA	8 cut(s)	279, 996, 1128, 1673, 1950, 1989, 2090, 2492
TscAI	CASTG	7 cut(s)	31, 241, 294, 1337, 1396, 1872, 1949
TseFI	GTSAC	3 cut(s)	285, 523, 2053
TseI	GCWGC	6 cut(s)	176, 295, 1198, 1838, 1925, 2567
Tsp45I	GTSAC	3 cut(s)	285, 523, 2053
TspDTI	ATGAA	8 cut(s)	706, 1130, 1223, 1452, 1587, 1815, 2472, 2608
TspGWI	ACGGA	1 cut(s)	629
TspRI	CASTG	7 cut(s)	31, 241, 294, 1337, 1396, 1872, 1949
Vha464I	CTTAAG	1 cut(s)	1949
VpaK11BI	GGWCC	1 cut(s)	2205
XapI	RAATTY	7 cut(s)	419, 1008, 1776, 1803, 2184, 2335, 2717
XbaI	TCTAGA	1 cut(s)	859
XceI	RCATGY	2 cut(s)	512, 1551
XcmI	CCANNNNNNNNNTGG	1 cut(s)	264
XhoI	CTCGAG	1 cut(s)	1969
XmiI	GTMKAC	1 cut(s)	2011
XmnI	GAANNNNTTC	1 cut(s)	1044
XspI	CTAG	5 cut(s)	860, 1163, 1241, 2135, 2453
ZrmI	AGTACT	1 cut(s)	1454
Zsp2I	ATGCAT	3 cut(s)	393, 1124, 1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.