Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0007890

Physical Location & Seq

Genomic Coordinates Reverse (-)

35570091 .. 35582573

Gene Structure 12483 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG286400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2772 bp

ATGCTCTCCAGCTCCATGGAGTTCAGGCCTCGCAATTACACTGCCGAGAAACAAGCCCACGCGCTTCCTCGATCACGCGCCGACGATCATCCTCTCTCCGCTCCATTGTCTCTACCTCACCCCGAGGTTGAGGTTGTTGATGATGGGGACACCGACTATCTTGACCCGCTCAGAAGGTCAGATAACAATGCAGCAGTTTCTATAGAGGATTTGGAAGGCATTGAAGACAGTTCTGCTTCGGGACTCTCCAGTGAAGCTTCGATTCAAAATCCATCAAAAGAATGGGTCTCTTTTAAGAGGTCACTGATGCAGCGGTTTCCGGTCTCCAAAACCGTTTTGACTTCTTCAATGTCCGATGTGATAGTGAAAGGCAGGAAAACATTTGACAAATCTTCAACAAATATGCATTTGGAGGAACTGGAAGATCCAGAAAAATTTGCAGAAGAGGGCGGCAAAGTCATCACAGGACAGGAATATGTTTCCCGGTTACACGAGCTCAAAGCTGAAATAAATCACACTTGGCATGCTGATGATCGTGTGACATCTTTGAAATTATCAATAAAAGTAGCTAAGCTTTTGATGGATACATCTATTTTACAATGTTATCCTACACTTTTTGTTCTTGCTACGGATATTATGGATATGCTTGGGGATATGGTGTGGGAACGCATCAAGTTGAAAGCTGAATTAGCTGAAGATGGAACCAAACTCTGCTTGTTACCAGAGAACTTCATGGCGAGTGATATTTGCTCCGATGCCAAAGAAACTTGCAATAATTGGTTCAGCAAAATTGGTGCAATCCGAGAGCTTCTTCCACGTATTTATTTGGAGCTCGCATTATTGCCTTGCTGGCGTTTCTTGCATGATCGACCTCTAGACTGTCTTCAGCGCTTGGTAATGATGACAAGAGGGTTAGCAGATCCATTGGCATCTGCCTACTGTCGCTTGTATATGGCCCATTGTTTTAGAAAGTTACACTCTCATGATATAGGATGTCTGCTCACCGGCGTTAATGACTTCAAAATTTTGTTGATGCGGGTGATATCGGCAAAGGAAACATTTCACAGAAACTTGACTGAAAACAAAAGATTGCTTATCAGTCTAATGGAACCAACCATTGATTATATCATGAAATGCATATTTAAAAATGTGTCTGAGAGACAGGTAAATGATGTACTAGTGGAGCTTGGGCTTGGATCTAATCAAGTGGAGCTGCGTGGAAGGTTCCCATGCGCCTCAATTATCCTTCATCATCTAGTCAAGCAACTTCCCTCGCAAGTAGTTAGCTCAAGTGCTATGGAGATCATTCAGCTCATTGAGTCCAGCAATGATGATTCCTATGATCAGTGCTTGAATTACAGGTTACTTGGATTTAGGCTGTGTGAAAGAAAATCTGAAATGGGCACTGTCAATGCTGTGGTGGACAAAATCATTCAGGTTATTACTCAATATGAAGGCCTTGATGAGTACTTGAAGGTTGTGGATGCTTATGTGGACATTTTCCTTCAAAATCATATGGATGACCACCTGAACTCCATTTTGGAAGGTATTTCAAACCGAGCATGCAGTCAAGGGATTGCTGAAGATGAACTGACGACCTTGCAGTCTATCTTGGTGAAGCTTCTTTCTTATTATGAGGATTTACAAGACGTAATTGCTATGACCCCTTTTCTGAAGATCTTGGATTTAATGCATGGAAGTTCACAAAGCATCGTCAATATGCAGATCCTTGACATGGGGATAAGGAATGGTTATATACGTGATCGGACAACTATACAGTTTCTTTTTGAAATTTCCCAGGCTCTACATGATGATGAAATTTTTGTGAATGTAAAAGATGATTCTAACCAAGCAGCACGTTTGATTTCTTCTTTTGTCTCACTGGTTGATTATGGGGCAGAGTTGGAAAGTCATTTGACCTTCTTAGTTGAATGCCGTGCAGCTTTTGGTAGCATACACTGGCTTAAGGAAACACTTGTTCACTCGAGTAATTGTTTAGCAATTAAGGCTCTGAAAGATGGGAGTAGACATATCAGTTTTATCAAATCCTGCATAGCATTTTCTGAAGTCACATTACCTTCTATTTCAGCTCAGACTAAGCAGTTAAATCTGTATCTTGAGACTGCAGAGGTAGCCTTACTTGGTGGTCTAGTTTCACATTCAGATGGACTGATTGACTCAGCAATCAACTCTTTGCAAATTTCAGAAGTGATGGATGGGTCCAGAACACCAATTGATGCTGATGGAATACTCTCCTCAATTCAAAAGTTATTAAGCCTCTTGGTTATGGTTCCAGGTAATCCTGAGCATGGAGTTACTTTCTATCCAAAGAACTTGGTATCGCTTGTAAATTCTCAGCCATGGATGCCACCAAGAATGAGAGTGAAGATTTTTTGTGCAGTTGTTTCTCTGTTAGCGGCACTATCTCAACGAGATCTGCCTTATCATGCAGATAAGGGAAAGCTTCTAGGAAACGACATACTGTTCTTTGGTCATTCATCGTATTTAAGTGAGCTTGTCTTGATGTGCAAGTTTGTTCTTCAGAACATGGTTGATACTATTCAACAAGAACCTTCCAAGGCTGCTCGTGGAAGTATGGCGCTTGAAGCTTGCAACTGCATTGCATCATCTTTCATTCCAAGTCAGGAAATATCCTCAATTTGCGCCAATCTAATAGAAACTGGAAAGTCGTGTATGGGCACCAGCCACCCGTATCTGCTATCGACAATCAAATTTACGGATCAGTTACTGCTTCCTTCTATTGCAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps35

Protein Analysis

923

Amino Acids

103.22

Weight (kDa)

5.35

Isoelectric Point (pI)

38.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50730 AT1G50730 AT1G50730
fragaria_vesca	FvH4_3g23170
malus_domestica	MD03G1197400.v1.1
prunus_persica	Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1 Prupe.4G218100_v2.0.a1
pyrus_communis	pycom03g14870
rosa_chinensis	RchiOBHm_Chr5g0040821
rosa_laevigata	RLG00000034005
rosa_multiflora	Rmu_sc0001579.1_g000005
rosa_roxburghii	Rroxscaffold_1G00039880
rosa_rugosa	Rorug05G0187900
rosa_samantha	Rh5AG273300 Rh5BG278500 Rh5CG310500 Rh5DG286400
rosa_wichuraiana	Rw5G025700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1603
AccB1I	GGYRCC	1 cut(s)	2699
AccBSI	CCGCTC	2 cut(s)	101, 169
AccI	GTMKAC	1 cut(s)	2026
AccII	CGCG	2 cut(s)	62, 78
AciI	CCGC	6 cut(s)	99, 167, 313, 450, 1036, 2417
AclWI	GGATC	5 cut(s)	419, 914, 1204, 1720, 2748
AcsI	RAATTY	7 cut(s)	434, 1023, 1791, 1818, 2199, 2350, 2732
AcuI	CTGAAG	6 cut(s)	714, 869, 1602, 1694, 2085, 2525
AfaI	GTAC	2 cut(s)	1176, 1469
AfeI	AGCGCT	1 cut(s)	890
AfiI	CCNNNNNNNGG	2 cut(s)	1735, 2309
AflII	CTTAAG	1 cut(s)	1964
AhlI	ACTAGT	1 cut(s)	1177
AjnI	CCWGG	2 cut(s)	1797, 2293
AjuI	GAANNNNNNNTTGG	2 cut(s)	1523, 1555
Alw21I	GWGCWC	2 cut(s)	498, 834
Alw26I	GTCTC	6 cut(s)	114, 292, 328, 1153, 1882, 2114
AlwI	GGATC	5 cut(s)	419, 914, 1204, 1720, 2748
AlwNI	CAGNNNCTG	1 cut(s)	2749
Ama87I	CYCGRG	2 cut(s)	122, 1984
Aor51HI	AGCGCT	1 cut(s)	890
AoxI	GGCC	3 cut(s)	26, 954, 1456
ApeKI	GCWGC	6 cut(s)	191, 310, 1213, 1853, 1940, 2582
ApoI	RAATTY	7 cut(s)	434, 1023, 1791, 1818, 2199, 2350, 2732
Asp700I	GAANNNNTTC	1 cut(s)	1059
AspLEI	GCGC	6 cut(s)	64, 80, 891, 1235, 2602, 2666
AspS9I	GGNCC	2 cut(s)	955, 2220
AsuC2I	CCSGG	1 cut(s)	484
AsuHPI	GGTGA	4 cut(s)	110, 994, 1051, 1627
AvaI	CYCGRG	2 cut(s)	122, 1984
AvaII	GGWCC	1 cut(s)	2220
BaeGI	GKGCMC	2 cut(s)	1406, 2702
BanI	GGYRCC	1 cut(s)	2699
BanII	GRGCYC	2 cut(s)	498, 834
BarI	GAAGNNNNNNTAC	2 cut(s)	2058, 2090
BauI	CACGAG	2 cut(s)	491, 2586
BbsI	GAAGAC	2 cut(s)	231, 875
Bbv12I	GWGCWC	2 cut(s)	498, 834
BbvI	GCAGC	6 cut(s)	203, 322, 1200, 1865, 1952, 2569
BccI	CCATC	9 cut(s)	137, 280, 574, 692, 2012, 2159, 2206, 2210, 2237
BceAI	ACGGC	1 cut(s)	1920
BciT130I	CCWGG	2 cut(s)	1799, 2295
BciVI	GTATCC	1 cut(s)	577
BclI	TGATCA	1 cut(s)	1342
BcnI	CCSGG	1 cut(s)	484
BcoDI	GTCTC	6 cut(s)	114, 292, 328, 1153, 1882, 2114
BcuI	ACTAGT	1 cut(s)	1177
BfaI	CTAG	5 cut(s)	875, 1178, 1256, 2150, 2468
BfmI	CTRYAG	2 cut(s)	201, 2124
BfoI	RGCGCY	2 cut(s)	892, 2603
BfrI	CTTAAG	1 cut(s)	1964
BfuI	GTATCC	1 cut(s)	577
BglI	GCCNNNNNGGC	1 cut(s)	850
BglII	AGATCT	2 cut(s)	1677, 2434
BisI	GCNGC	8 cut(s)	192, 311, 451, 1214, 1854, 1941, 2418, 2583
BlpI	GCTNAGC	1 cut(s)	570
BlsI	GCNGC	8 cut(s)	193, 312, 452, 1215, 1855, 1942, 2419, 2584
BmcAI	AGTACT	1 cut(s)	1469
Bme1390I	CCNGG	3 cut(s)	484, 1799, 2295
Bme18I	GGWCC	1 cut(s)	2220
BmeT110I	CYCGRG	2 cut(s)	122, 1984
BmgT120I	GGNCC	2 cut(s)	955, 2220
BmiI	GGNNCC	6 cut(s)	703, 1110, 1226, 2221, 2292, 2701
BmrFI	CCNGG	3 cut(s)	484, 1799, 2295
BpiI	GAAGAC	2 cut(s)	231, 875
BpmI	CTGGAG	1 cut(s)	232
Bpu10I	CCTNAGC	1 cut(s)	2304
Bpu1102I	GCTNAGC	1 cut(s)	570
BpuEI	CTTGAG	2 cut(s)	1273, 2138
BpuMI	CCSGG	1 cut(s)	484
BsaAI	YACGTR	2 cut(s)	818, 1760
BsaI	GGTCTC	2 cut(s)	292, 328
BsaJI	CCNNGG	5 cut(s)	15, 123, 1797, 2360, 2577
BsaWI	WCCGGW	1 cut(s)	319
BsaXI	ACNNNNNCTCC	2 cut(s)	1517, 1547
Bsc4I	CCNNNNNNNGG	2 cut(s)	1735, 2309
Bse118I	RCCGGY	1 cut(s)	1004
Bse1I	ACTGG	5 cut(s)	249, 423, 1887, 1964, 2686
Bse3DI	GCAATG	2 cut(s)	1333, 2619
BseBI	CCWGG	2 cut(s)	1799, 2295
BseDI	CCNNGG	5 cut(s)	15, 123, 1797, 2360, 2577
BseGI	GGATG	6 cut(s)	88, 998, 1489, 1525, 2221, 2370
BseLI	CCNNNNNNNGG	2 cut(s)	1735, 2309
BseMI	GCAATG	2 cut(s)	1333, 2619
BseMII	CTCAG	6 cut(s)	184, 1146, 2105, 2193, 2295, 2369
BseNI	ACTGG	5 cut(s)	249, 423, 1887, 1964, 2686
BseRI	GAGGAG	1 cut(s)	2245
BseSI	GKGCMC	2 cut(s)	1406, 2702
BseXI	GCAGC	6 cut(s)	203, 322, 1200, 1865, 1952, 2569
BsgI	GTGCAG	2 cut(s)	1959, 2418
Bsh1236I	CGCG	2 cut(s)	62, 78
BshFI	GGCC	3 cut(s)	28, 956, 1458
BshNI	GGYRCC	1 cut(s)	2699
BsiHKAI	GWGCWC	2 cut(s)	498, 834
BsiHKCI	CYCGRG	2 cut(s)	122, 1984
BsiSI	CCGG	3 cut(s)	320, 484, 1005
BslFI	GGGAC	2 cut(s)	161, 255
BslI	CCNNNNNNNGG	2 cut(s)	1735, 2309
BsmAI	GTCTC	6 cut(s)	114, 292, 328, 1153, 1882, 2114
BsmFI	GGGAC	2 cut(s)	161, 255
BsmI	GAATGC	1 cut(s)	1937
BsnI	GGCC	3 cut(s)	28, 956, 1458
Bso31I	GGTCTC	2 cut(s)	292, 328
BsoBI	CYCGRG	2 cut(s)	122, 1984
Bsp1286I	GDGCHC	4 cut(s)	498, 834, 1406, 2702
Bsp1720I	GCTNAGC	1 cut(s)	570
Bsp19I	CCATGG	2 cut(s)	15, 2360
BspACI	CCGC	6 cut(s)	99, 167, 313, 450, 1036, 2417
BspANI	GGCC	3 cut(s)	28, 956, 1458
BspCNI	CTCAG	6 cut(s)	183, 1147, 2104, 2192, 2296, 2368
BspFNI	CGCG	2 cut(s)	62, 78
BspHI	TCATGA	2 cut(s)	982, 1128
BspLI	GGNNCC	6 cut(s)	703, 1110, 1226, 2221, 2292, 2701
BspMAI	CTGCAG	1 cut(s)	2128
BspPI	GGATC	5 cut(s)	419, 914, 1204, 1720, 2748
BspT107I	GGYRCC	1 cut(s)	2699
BspTI	CTTAAG	1 cut(s)	1964
BspTNI	GGTCTC	2 cut(s)	292, 328
BsrBI	CCGCTC	2 cut(s)	101, 169
BsrDI	GCAATG	2 cut(s)	1333, 2619
BsrFI	RCCGGY	1 cut(s)	1004
BsrI	ACTGG	5 cut(s)	249, 423, 1887, 1964, 2686
BssAI	RCCGGY	1 cut(s)	1004
BssECI	CCNNGG	5 cut(s)	15, 123, 1797, 2360, 2577
BssSI	CACGAG	2 cut(s)	491, 2586
BssT1I	CCWWGG	3 cut(s)	15, 2360, 2577
Bst2BI	CACGAG	2 cut(s)	491, 2586
Bst2UI	CCWGG	2 cut(s)	1799, 2295
Bst4CI	ACNGT	7 cut(s)	230, 334, 881, 941, 1408, 1779, 2484
Bst6I	CTCTTC	1 cut(s)	438
BstAFI	CTTAAG	1 cut(s)	1964
BstBAI	YACGTR	2 cut(s)	818, 1760
BstC8I	GCNNGC	5 cut(s)	525, 834, 851, 1564, 2611
BstDEI	CTNAG	9 cut(s)	170, 570, 1155, 1924, 2091, 2097, 2179, 2304, 2355
BstDSI	CCRYGG	2 cut(s)	15, 2360
BstF5I	GGATG	6 cut(s)	88, 998, 1489, 1525, 2221, 2370
BstFNI	CGCG	2 cut(s)	62, 78
BstH2I	RGCGCY	2 cut(s)	892, 2603
BstHHI	GCGC	6 cut(s)	64, 80, 891, 1235, 2602, 2666
BstMAI	GTCTC	6 cut(s)	114, 292, 328, 1153, 1882, 2114
BstMWI	GCNNNNNNNGC	7 cut(s)	689, 850, 859, 2006, 2132, 2365, 2606
BstNI	CCWGG	2 cut(s)	1799, 2295
BstNSI	RCATGY	2 cut(s)	527, 1566
BstSCI	CCNGG	3 cut(s)	482, 1797, 2293
BstSFI	CTRYAG	2 cut(s)	201, 2124
BstSLI	GKGCMC	2 cut(s)	1406, 2702
BstUI	CGCG	2 cut(s)	62, 78
BstV1I	GCAGC	6 cut(s)	203, 322, 1200, 1865, 1952, 2569
BstV2I	GAAGAC	2 cut(s)	231, 875
BstX2I	RGATCY	6 cut(s)	424, 919, 1196, 1677, 1725, 2434
BstXI	CCANNNNNNTGG	1 cut(s)	16
BstYI	RGATCY	6 cut(s)	424, 919, 1196, 1677, 1725, 2434
BsuI	GTATCC	1 cut(s)	577
BsuRI	GGCC	3 cut(s)	28, 956, 1458
BtgI	CCRYGG	2 cut(s)	15, 2360
BtsCI	GGATG	6 cut(s)	88, 998, 1489, 1525, 2221, 2370
BtsI	GCAGTG	1 cut(s)	39
BtsIMutI	CAGTG	7 cut(s)	39, 256, 302, 1352, 1404, 1880, 1957
Cac8I	GCNNGC	5 cut(s)	525, 834, 851, 1564, 2611
CaiI	CAGNNNCTG	1 cut(s)	2749
CciI	TCATGA	2 cut(s)	982, 1128
CfoI	GCGC	6 cut(s)	64, 80, 891, 1235, 2602, 2666
Cfr10I	RCCGGY	1 cut(s)	1004
Cfr13I	GGNCC	2 cut(s)	955, 2220
Csp6I	GTAC	2 cut(s)	1175, 1468
CviQI	GTAC	2 cut(s)	1175, 1468
DdeI	CTNAG	9 cut(s)	170, 570, 1155, 1924, 2091, 2097, 2179, 2304, 2355
DraI	TTTAAA	1 cut(s)	1144
DrdI	GACNNNNNNGTC	1 cut(s)	1603
DseDI	GACNNNNNNGTC	1 cut(s)	1603
Eam1104I	CTCTTC	1 cut(s)	438
EarI	CTCTTC	1 cut(s)	438
Ecl136II	GAGCTC	2 cut(s)	496, 832
Eco130I	CCWWGG	3 cut(s)	15, 2360, 2577
Eco147I	AGGCCT	2 cut(s)	28, 1458
Eco24I	GRGCYC	2 cut(s)	498, 834
Eco31I	GGTCTC	2 cut(s)	292, 328
Eco32I	GATATC	1 cut(s)	1044
Eco47I	GGWCC	1 cut(s)	2220
Eco47III	AGCGCT	1 cut(s)	890
Eco53kI	GAGCTC	2 cut(s)	496, 832
Eco57I	CTGAAG	6 cut(s)	714, 869, 1602, 1694, 2085, 2525
Eco88I	CYCGRG	2 cut(s)	122, 1984
EcoICRI	GAGCTC	2 cut(s)	496, 832
EcoRII	CCWGG	2 cut(s)	1797, 2293
EcoRV	GATATC	1 cut(s)	1044
EcoT14I	CCWWGG	3 cut(s)	15, 2360, 2577
EcoT22I	ATGCAT	3 cut(s)	408, 1139, 1695
EcoT38I	GRGCYC	2 cut(s)	498, 834
ErhI	CCWWGG	3 cut(s)	15, 2360, 2577
FaqI	GGGAC	2 cut(s)	161, 255
FauI	CCCGC	2 cut(s)	174, 1029
FauNDI	CATATG	1 cut(s)	1515
FbaI	TGATCA	1 cut(s)	1342
FblI	GTMKAC	1 cut(s)	2026
Fnu4HI	GCNGC	8 cut(s)	192, 311, 451, 1214, 1854, 1941, 2418, 2583
FokI	GGATG	6 cut(s)	75, 1005, 1496, 1532, 2228, 2377
FriOI	GRGCYC	2 cut(s)	498, 834
Fsp4HI	GCNGC	8 cut(s)	192, 311, 451, 1214, 1854, 1941, 2418, 2583
FspBI	CTAG	5 cut(s)	875, 1178, 1256, 2150, 2468
GlaI	GCGC	6 cut(s)	63, 79, 890, 1234, 2601, 2665
GluI	GCNGC	8 cut(s)	192, 311, 451, 1214, 1854, 1941, 2418, 2583
GsuI	CTGGAG	1 cut(s)	232
HaeII	RGCGCY	2 cut(s)	892, 2603
HaeIII	GGCC	3 cut(s)	28, 956, 1458
HapII	CCGG	3 cut(s)	320, 484, 1005
HhaI	GCGC	6 cut(s)	64, 80, 891, 1235, 2602, 2666
Hin6I	GCGC	6 cut(s)	62, 78, 889, 1233, 2600, 2664
HinP1I	GCGC	6 cut(s)	62, 78, 889, 1233, 2600, 2664
HindIII	AAGCTT	5 cut(s)	255, 572, 1619, 2462, 2607
HinfI	GANTC	6 cut(s)	243, 262, 1319, 1334, 1841, 2177
HpaII	CCGG	3 cut(s)	320, 484, 1005
HphI	GGTGA	4 cut(s)	110, 994, 1051, 1627
Hpy166II	GTNNAC	5 cut(s)	1423, 1495, 1703, 1981, 2027
Hpy8I	GTNNAC	5 cut(s)	1423, 1495, 1703, 1981, 2027
Hpy99I	CGWCG	1 cut(s)	86
HpyCH4III	ACNGT	7 cut(s)	230, 334, 881, 941, 1408, 1779, 2484
HpyCH4IV	ACGT	4 cut(s)	817, 1650, 1759, 1858
HpyF10VI	GCNNNNNNNGC	7 cut(s)	689, 850, 859, 2006, 2132, 2365, 2606
HpyF3I	CTNAG	9 cut(s)	170, 570, 1155, 1924, 2091, 2097, 2179, 2304, 2355
HpySE526I	ACGT	4 cut(s)	817, 1650, 1759, 1858
HspAI	GCGC	6 cut(s)	62, 78, 889, 1233, 2600, 2664
Ksp22I	TGATCA	1 cut(s)	1342
LmnI	GCTCC	6 cut(s)	17, 106, 755, 829, 1183, 1210
Lsp1109I	GCAGC	6 cut(s)	203, 322, 1200, 1865, 1952, 2569
MaeI	CTAG	5 cut(s)	875, 1178, 1256, 2150, 2468
MaeII	ACGT	4 cut(s)	817, 1650, 1759, 1858
MaeIII	GTNAC	9 cut(s)	300, 486, 538, 717, 972, 1362, 2068, 2314, 2745
MbiI	CCGCTC	2 cut(s)	101, 169
MfeI	CAATTG	1 cut(s)	2232
MflI	RGATCY	6 cut(s)	424, 919, 1196, 1677, 1725, 2434
MhlI	GDGCHC	4 cut(s)	498, 834, 1406, 2702
MlyI	GAGTC	3 cut(s)	237, 1328, 2171
MmeI	TCCRAC	1 cut(s)	1884
Mph1103I	ATGCAT	3 cut(s)	408, 1139, 1695
MroXI	GAANNNNTTC	1 cut(s)	1059
MseI	TTAA	9 cut(s)	294, 1011, 1143, 1688, 1965, 2004, 2105, 2273, 2507
MslI	CAYNNNNRTG	5 cut(s)	528, 981, 1518, 1812, 2163
MspA1I	CMGCKG	1 cut(s)	313
MspCI	CTTAAG	1 cut(s)	1964
MspI	CCGG	3 cut(s)	320, 484, 1005
MspR9I	CCNGG	3 cut(s)	484, 1799, 2295
MunI	CAATTG	1 cut(s)	2232
Mva1269I	GAATGC	1 cut(s)	1937
MvaI	CCWGG	2 cut(s)	1799, 2295
MvnI	CGCG	2 cut(s)	62, 78
MwoI	GCNNNNNNNGC	7 cut(s)	689, 850, 859, 2006, 2132, 2365, 2606
NciI	CCSGG	1 cut(s)	484
NcoI	CCATGG	2 cut(s)	15, 2360
NdeI	CATATG	1 cut(s)	1515
NlaIV	GGNNCC	6 cut(s)	703, 1110, 1226, 2221, 2292, 2701
NmeAIII	GCCGAG	1 cut(s)	70
NmuCI	GTSAC	3 cut(s)	300, 538, 2068
NsiI	ATGCAT	3 cut(s)	408, 1139, 1695
NspI	RCATGY	2 cut(s)	527, 1566
PaeI	GCATGC	2 cut(s)	527, 1566
PaeR7I	CTCGAG	1 cut(s)	1984
PagI	TCATGA	2 cut(s)	982, 1128
PceI	AGGCCT	2 cut(s)	28, 1458
PctI	GAATGC	1 cut(s)	1937
PdmI	GAANNNNTTC	1 cut(s)	1059
PfeI	GAWTC	3 cut(s)	262, 1334, 1841
PkrI	GCNGC	8 cut(s)	193, 312, 452, 1215, 1855, 1942, 2419, 2584
PleI	GAGTC	3 cut(s)	237, 1327, 2171
PpsI	GAGTC	3 cut(s)	237, 1327, 2171
Ppu21I	YACGTR	2 cut(s)	818, 1760
Psp124BI	GAGCTC	2 cut(s)	498, 834
Psp6I	CCWGG	2 cut(s)	1797, 2293
PspGI	CCWGG	2 cut(s)	1797, 2293
PspN4I	GGNNCC	6 cut(s)	703, 1110, 1226, 2221, 2292, 2701
PspPI	GGNCC	2 cut(s)	955, 2220
PspXI	VCTCGAGB	1 cut(s)	1984
PstI	CTGCAG	1 cut(s)	2128
PstNI	CAGNNNCTG	1 cut(s)	2749
PsuI	RGATCY	6 cut(s)	424, 919, 1196, 1677, 1725, 2434
RsaI	GTAC	2 cut(s)	1176, 1469
RsaNI	GTAC	2 cut(s)	1175, 1468
RseI	CAYNNNNRTG	5 cut(s)	528, 981, 1518, 1812, 2163
SacI	GAGCTC	2 cut(s)	498, 834
SaqAI	TTAA	9 cut(s)	294, 1011, 1143, 1688, 1965, 2004, 2105, 2273, 2507
SatI	GCNGC	8 cut(s)	192, 311, 451, 1214, 1854, 1941, 2418, 2583
Sau96I	GGNCC	2 cut(s)	955, 2220
ScaI	AGTACT	1 cut(s)	1469
SchI	GAGTC	3 cut(s)	237, 1328, 2171
ScrFI	CCNGG	3 cut(s)	484, 1799, 2295
SduI	GDGCHC	4 cut(s)	498, 834, 1406, 2702
SfcI	CTRYAG	2 cut(s)	201, 2124
Sfr274I	CTCGAG	1 cut(s)	1984
SgrAI	CRCCGGYG	1 cut(s)	1004
SinI	GGWCC	1 cut(s)	2220
SlaI	CTCGAG	1 cut(s)	1984
SmiMI	CAYNNNNRTG	5 cut(s)	528, 981, 1518, 1812, 2163
SmlI	CTYRAG	4 cut(s)	1288, 1964, 1984, 2117
SmoI	CTYRAG	4 cut(s)	1288, 1964, 1984, 2117
SpeI	ACTAGT	1 cut(s)	1177
SphI	GCATGC	2 cut(s)	527, 1566
SseBI	AGGCCT	2 cut(s)	28, 1458
SsiI	CCGC	6 cut(s)	99, 167, 313, 450, 1036, 2417
SspMI	CTAG	5 cut(s)	875, 1178, 1256, 2150, 2468
SstI	GAGCTC	2 cut(s)	498, 834
StuI	AGGCCT	2 cut(s)	28, 1458
StyD4I	CCNGG	3 cut(s)	482, 1797, 2293
StyI	CCWWGG	3 cut(s)	15, 2360, 2577
TaaI	ACNGT	7 cut(s)	230, 334, 881, 941, 1408, 1779, 2484
TaiI	ACGT	4 cut(s)	820, 1653, 1762, 1861
TaqI	TCGA	5 cut(s)	70, 260, 868, 1985, 2723
TatI	WGTACW	2 cut(s)	1174, 1467
TauI	GCSGC	2 cut(s)	453, 2420
TfiI	GAWTC	3 cut(s)	262, 1334, 1841
Tru1I	TTAA	9 cut(s)	294, 1011, 1143, 1688, 1965, 2004, 2105, 2273, 2507
Tru9I	TTAA	9 cut(s)	294, 1011, 1143, 1688, 1965, 2004, 2105, 2273, 2507
TscAI	CASTG	7 cut(s)	46, 256, 309, 1352, 1411, 1887, 1964
TseFI	GTSAC	3 cut(s)	300, 538, 2068
TseI	GCWGC	6 cut(s)	191, 310, 1213, 1853, 1940, 2582
Tsp45I	GTSAC	3 cut(s)	300, 538, 2068
TspDTI	ATGAA	8 cut(s)	721, 1145, 1238, 1467, 1602, 1830, 2487, 2623
TspGWI	ACGGA	2 cut(s)	644, 2753
TspRI	CASTG	7 cut(s)	46, 256, 309, 1352, 1411, 1887, 1964
Vha464I	CTTAAG	1 cut(s)	1964
VpaK11BI	GGWCC	1 cut(s)	2220
XapI	RAATTY	7 cut(s)	434, 1023, 1791, 1818, 2199, 2350, 2732
XbaI	TCTAGA	1 cut(s)	874
XceI	RCATGY	2 cut(s)	527, 1566
XcmI	CCANNNNNNNNNTGG	1 cut(s)	279
XhoI	CTCGAG	1 cut(s)	1984
XmiI	GTMKAC	1 cut(s)	2026
XmnI	GAANNNNTTC	1 cut(s)	1059
XspI	CTAG	5 cut(s)	875, 1178, 1256, 2150, 2468
ZrmI	AGTACT	1 cut(s)	1469
Zsp2I	ATGCAT	3 cut(s)	408, 1139, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.