MD03G1197400.v1.1

UPF0505 protein C16orf62 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0007890
Physical Location & Seq
Forward (+)
26942801 .. 26967732
24932 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1197400.v1.1.491

Sequence Viewer

Length: 2742 bp
ATGGAGTTCAGACCGCGCAACTACATCGCCGAAAAAGAAGCCCACGCGCTTCCTCGCGTACTCGCGGACAGCCACCCTTTCTCCGCTCCATCTTCTCCATCTCAGCTCCAGGTTGAGGTCGTGGATGATGGGAATGAGGAGTACTTTGACCCCCTCAGAAGGTCGGATAACAATGCCGAAGCTTCTAGAGAGGATTTGGTGGAAATTGAAACCAGTTCTACTGCAGGACTCTCTGGTGAAGCTTCTATTCAAAATCCGTCCAAAGAATGGGCCTTTTTTAAGAGATCCCTGATGCAGAGGTTTCCAGTCTCCAAATCAGTTTTGACTTATTCAATGTCCGACATGATAGTGAAAGGCAGGAAAACACATGAGAAATCTTCGACAAGTATGCATTTGGAGGAACTGGAAGATCCAGAAAAATTTGCAGAAGAGGGGGGCAAGGTCATCACAGGCCAGGAATATGTTTCTCGGTTGCATGAGCTTAAAGCTGAATTAACTCATGCATGGCATGCCAATGATCGTGTTACATCCCTGAAATTATCAATAAAAGTTGCTAGGCTTTTGATGGATACATCTGTTTTACAATGTTATCCTACACTCTTTGCTATTGCTACGGATATTTTGGATATTCTTGGGGATATGGTATGGGAGCGAATCAAGTTGAAAGCTGAATTTACTGAAGATGGTACCAGAATCTTCTCCTTACCAGAGAACTTTTCAGTAAGTGACATCTGCTTTGATGCCAAAGAAACTTGCAACAATTGGTTCTGCAAAATTGGTGCAGTCCGAGAACTTCTTCCACGCATTTATTTGGAGCTGGCATTGTTGCCTTGTTGGCGTTTCTTAGTTGACCAACCTCTCAACAGTCTCCGTCGCTTGGTAATGATGACAAGAGGGTTAGCAGATCCATTGGCTTCTGCCTATTGCCGTCTGTATATGGCTCATTGCATGAGGAAGTTGCCTTCACATGATACAGGATGTCTGCTCACCTGTGTGAATGACTTGAAAATTGTGTCGATGAGGGTCATGTCAGCACAGGAAACCTCTCATGGAGCTGAAAACAGAAGATTGGTTGTTAGTCTGATGGAACCAACCATTGAGTATATCATGAAATGCATATTTAGGAATGCGTCTGAGAAACAAGTAGGTGATGTACTCGTTGAGCTTGGAGTTGGGTTGAATCAAAAGGAGTTGCTTGGAAGGTTCCCATGTCTCTCGATTGTTCTTCATCATCTACTCAAGCAACTTCCATCTGAAGTAGTTAGCTCAAGGGCAGTGGAGATCCTTCATCTTATTGAGTGCAGCAGGGATGATTCCCTTGATCAGTGCTTGAATTACAGGTTACTTGGATTTAGGCTGTGTGAAAAATCTCAAATGGACACTGTCAATTCTGTAGTGGACAAAGTCATTCAGGTTATTATTGAATATGATGGACTTGATGACTACTTGAAGGTTGTGGATGCTTTTGTGGATATTGTTCTACAAAATCATATGGATGACCATCTAAGCTCCATTTTAGAAGGCATTTCAAAACGAGCATGCACTAAAGGGATTGCTGATGATGAACTGGCAACCTTGCAGTCCATTTTGGTGAAGCTTCTTTCATATTGCAAGGACATAGAAGACATGTTTTCCATGAATCATTTTCTCAAGATCTTGGATCTGATGTATGGAAATTCACGAAGCATTGTCAATATCCATATCCTTGATATGGGTATAAGGAAGGGTTGTATACGTGATCCAAGAACTATACAGTTTCTTCTTGAAATTTCTCAGGCTCTGCATCATGACGAAAATTTTGTGAATCTAAAAGATGATAACCAACCAACACGTTTGATTTCTCAGTTTGTATCTCTGGTTGATTATGGAGCAGAGATTGAGAGTCAGTTGGCATTCTTAGTTGAATGTCGTGGAACTTTTGGTAGCATACGCGGGCTTAAGGAAACTCTCATTCACTCCAGTAATTGTTTAGCGATTAAGGCTTTGAAAGATGCAAAACATCTCAGTTTTGTCAAATCCTGCATAGCATTTTCTGAAGTCACTTTACCTTCTATTTCAAGCCAGATTATGCAGTTAAATCTTTATCTTGAGACTGCAGAGGTCGCTCTACTGGGTGGCTTAGTTTCTCATTCGGATGGATTGATTGATTCTGCGATCAACTCTTTGCAAAGTTTAGACGTAATGGATGGCTCCAGACCACCGATTGATGCTGACGCAGTACTCTCCTCAGTTCAAAAGTTATTCAGCTTCTTGGTTATGGTTCCAGGTAATCCTGAAGATGGAGTGACGTACTTTCCGAAGAACTTGGTGTCGCTACTTAACTCTCAGTCATGGATGACACCAAGAATGAGGGTGAAAGTTTTTTGTGCAATTATTTCTCTGTTAGCAGCACTTTCTCAACGAAATCTCCCTTATCATGCAGATGGTGAAAAGCTTCTAGGAAATGACGTATTGTTCTTTGGTGATTCATCATATTTACATGAGCTTGCGTCATTTTGCGAGTTTGTTCTTCAGAACCTCGTTGATGCTATTCAACAAGAACCTTCCAAGGCTGCTCGCGGGAGCATGGCGCTTGAAGCTTGCAACTGCATTGCATCATCTTTGATTCTAAGTCAGGAAATATCATCAATTTGCTCGAATCTAATAGAGACCGGGAAGTCGTGTATGAGCACAAACAACAGATATCTGCAATCGACAATTAAATTTGTGGATCACTTGCCAGATTCATCTGTTGCTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps35

Protein Analysis

914

Amino Acids

102.2

Weight (kDa)

5.34

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Vps35 PF03635 458 - 702 2.2e-07 Vacuolar protein sorting-associated protein 35
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2656
Acc65I GGTACC 1 cut(s) 686
AccB1I GGYRCC 1 cut(s) 686
AccB7I CCANNNNNTGG 1 cut(s) 267
AccBSI CCGCTC 1 cut(s) 86
AccI GTMKAC 1 cut(s) 1732
AccII CGCG 6 cut(s) 16, 47, 57, 65, 1932, 2559
AciI CCGC 5 cut(s) 14, 65, 84, 1932, 2559
AclWI GGATC 7 cut(s) 279, 404, 899, 1276, 1668, 1733, 2718
AcsI RAATTY 6 cut(s) 419, 671, 1675, 1767, 1795, 2702
AcuI CTGAAG 5 cut(s) 699, 1275, 2055, 2295, 2495
AfaI GTAC 6 cut(s) 60, 143, 688, 1155, 2220, 2291
AfiI CCNNNNNNNGG 6 cut(s) 115, 159, 267, 877, 1711, 2279
AflII CTTAAG 1 cut(s) 1937
AflIII ACRYGT 2 cut(s) 1626, 1829
AjnI CCWGG 3 cut(s) 108, 453, 2263
AleI CACNNNNGTG 1 cut(s) 992
Alw21I GWGCWC 1 cut(s) 2672
Alw26I GTCTC 5 cut(s) 313, 872, 1217, 2084, 2642
AlwI GGATC 7 cut(s) 279, 404, 899, 1276, 1668, 1733, 2718
AlwNI CAGNNNCTG 1 cut(s) 1780
AoxI GGCC 2 cut(s) 270, 451
ApeKI GCWGC 3 cut(s) 1302, 2387, 2552
ApoI RAATTY 6 cut(s) 419, 671, 1675, 1767, 1795, 2702
ArsI GACNNNNNNTTYG 4 cut(s) 719, 751, 1781, 1813
Asp700I GAANNNNTTC 2 cut(s) 795, 2433
Asp718I GGTACC 1 cut(s) 686
AspLEI GCGC 3 cut(s) 18, 49, 2572
AspS9I GGNCC 1 cut(s) 270
AsuC2I CCSGG 1 cut(s) 2653
AsuHPI GGTGA 7 cut(s) 248, 979, 1160, 1603, 2365, 2438, 2474
BaeI ACNNNNGTAYC 2 cut(s) 561, 594
BanI GGYRCC 1 cut(s) 686
BarI GAAGNNNNNNTAC 2 cut(s) 2028, 2060
BbsI GAAGAC 1 cut(s) 1629
Bbv12I GWGCWC 1 cut(s) 2672
BbvI GCAGC 3 cut(s) 1314, 2399, 2539
BceAI ACGGC 1 cut(s) 912
BcgI CGANNNNNNTGC 4 cut(s) 7, 41, 370, 404
BciT130I CCWGG 3 cut(s) 110, 455, 2265
BciVI GTATCC 1 cut(s) 562
BclI TGATCA 1 cut(s) 1321
BcnI CCSGG 1 cut(s) 2653
BcoDI GTCTC 5 cut(s) 313, 872, 1217, 2084, 2642
BfaI CTAG 3 cut(s) 186, 555, 2438
BfmI CTRYAG 3 cut(s) 222, 1392, 2094
BfoI RGCGCY 1 cut(s) 2573
BfrI CTTAAG 1 cut(s) 1937
BfuI GTATCC 1 cut(s) 562
BglI GCCNNNNNGGC 1 cut(s) 835
BglII AGATCT 1 cut(s) 1653
BisI GCNGC 3 cut(s) 1303, 2388, 2553
BlsI GCNGC 3 cut(s) 1304, 2389, 2554
BmcAI AGTACT 2 cut(s) 143, 2220
Bme1390I CCNGG 4 cut(s) 110, 455, 2265, 2653
BmgT120I GGNCC 1 cut(s) 270
BmiI GGNNCC 5 cut(s) 688, 1089, 1205, 2191, 2262
BmrFI CCNGG 4 cut(s) 110, 455, 2265, 2653
BmrI ACTGGG 1 cut(s) 2120
BmsI GCATC 8 cut(s) 282, 730, 1450, 1792, 1981, 2197, 2515, 2603
BmuI ACTGGG 1 cut(s) 2120
BpiI GAAGAC 1 cut(s) 1629
BpmI CTGGAG 3 cut(s) 92, 1942, 2176
BpuEI CTTGAG 4 cut(s) 1223, 1252, 1634, 2108
BpuMI CCSGG 1 cut(s) 2653
BsaAI YACGTR 1 cut(s) 1736
BsaBI GATNNNNATC 1 cut(s) 1500
BsaI GGTCTC 1 cut(s) 2642
BsaJI CCNNGG 1 cut(s) 2547
BsaXI ACNNNNNCTCC 4 cut(s) 65, 95, 2391, 2421
Bsc4I CCNNNNNNNGG 6 cut(s) 115, 159, 267, 877, 1711, 2279
Bse1I ACTGG 6 cut(s) 213, 305, 408, 1572, 1959, 2115
Bse3DI GCAATG 2 cut(s) 943, 2589
Bse8I GATNNNNATC 1 cut(s) 1500
BseBI CCWGG 3 cut(s) 110, 455, 2265
BseDI CCNNGG 1 cut(s) 2547
BseGI GGATG 9 cut(s) 130, 527, 983, 1315, 1465, 1501, 2140, 2191, 2340
BseJI GATNNNNATC 1 cut(s) 1500
BseLI CCNNNNNNNGG 6 cut(s) 115, 159, 267, 877, 1711, 2279
BseMI GCAATG 2 cut(s) 943, 2589
BseMII CTCAG 8 cut(s) 116, 169, 1125, 1787, 1856, 2017, 2241, 2339
BseNI ACTGG 6 cut(s) 213, 305, 408, 1572, 1959, 2115
BseRI GAGGAG 2 cut(s) 152, 2215
BseXI GCAGC 3 cut(s) 1314, 2399, 2539
BsgI GTGCAG 2 cut(s) 801, 1321
Bsh1236I CGCG 6 cut(s) 16, 47, 57, 65, 1932, 2559
BshFI GGCC 2 cut(s) 272, 453
BshNI GGYRCC 1 cut(s) 686
BsiHKAI GWGCWC 1 cut(s) 2672
BsiSI CCGG 1 cut(s) 2652
BslI CCNNNNNNNGG 6 cut(s) 115, 159, 267, 877, 1711, 2279
BsmAI GTCTC 5 cut(s) 313, 872, 1217, 2084, 2642
BsmI GAATGC 2 cut(s) 1132, 1892
BsnI GGCC 2 cut(s) 272, 453
Bso31I GGTCTC 1 cut(s) 2642
Bsp1286I GDGCHC 1 cut(s) 2672
BspACI CCGC 5 cut(s) 14, 65, 84, 1932, 2559
BspANI GGCC 2 cut(s) 272, 453
BspCNI CTCAG 8 cut(s) 115, 168, 1126, 1786, 1855, 2016, 2240, 2338
BspFNI CGCG 6 cut(s) 16, 47, 57, 65, 1932, 2559
BspHI TCATGA 2 cut(s) 1107, 1786
BspLI GGNNCC 5 cut(s) 688, 1089, 1205, 2191, 2262
BspMAI CTGCAG 2 cut(s) 226, 2098
BspPI GGATC 7 cut(s) 279, 404, 899, 1276, 1668, 1733, 2718
BspT107I GGYRCC 1 cut(s) 686
BspTI CTTAAG 1 cut(s) 1937
BspTNI GGTCTC 1 cut(s) 2642
BsrBI CCGCTC 1 cut(s) 86
BsrDI GCAATG 2 cut(s) 943, 2589
BsrI ACTGG 6 cut(s) 213, 305, 408, 1572, 1959, 2115
BssECI CCNNGG 1 cut(s) 2547
BssNAI GTATAC 1 cut(s) 1733
BssT1I CCWWGG 1 cut(s) 2547
Bst1107I GTATAC 1 cut(s) 1733
Bst2UI CCWGG 3 cut(s) 110, 455, 2265
Bst4CI ACNGT 3 cut(s) 866, 1384, 1755
Bst6I CTCTTC 1 cut(s) 423
BstAFI CTTAAG 1 cut(s) 1937
BstAPI GCANNNNNTGC 1 cut(s) 509
BstBAI YACGTR 1 cut(s) 1736
BstC8I GCNNGC 7 cut(s) 510, 819, 1540, 1934, 2487, 2557, 2581
BstF5I GGATG 9 cut(s) 130, 527, 983, 1315, 1465, 1501, 2140, 2191, 2340
BstFNI CGCG 6 cut(s) 16, 47, 57, 65, 1932, 2559
BstH2I RGCGCY 1 cut(s) 2573
BstHHI GCGC 3 cut(s) 18, 49, 2572
BstMAI GTCTC 5 cut(s) 313, 872, 1217, 2084, 2642
BstMWI GCNNNNNNNGC 5 cut(s) 509, 835, 1979, 2102, 2576
BstNI CCWGG 3 cut(s) 110, 455, 2265
BstNSI RCATGY 3 cut(s) 512, 1542, 1630
BstSCI CCNGG 4 cut(s) 108, 453, 2263, 2651
BstSFI CTRYAG 3 cut(s) 222, 1392, 2094
BstUI CGCG 6 cut(s) 16, 47, 57, 65, 1932, 2559
BstV1I GCAGC 3 cut(s) 1314, 2399, 2539
BstV2I GAAGAC 1 cut(s) 1629
BstX2I RGATCY 6 cut(s) 284, 409, 904, 1281, 1653, 1660
BstYI RGATCY 6 cut(s) 284, 409, 904, 1281, 1653, 1660
BstZ17I GTATAC 1 cut(s) 1733
BsuI GTATCC 1 cut(s) 562
BsuRI GGCC 2 cut(s) 272, 453
BtgZI GCGATG 1 cut(s) 10
BtsCI GGATG 9 cut(s) 130, 527, 983, 1315, 1465, 1501, 2140, 2191, 2340
BtsI GCAGTG 1 cut(s) 1281
BtsIMutI CAGTG 3 cut(s) 1281, 1331, 1380
Cac8I GCNNGC 7 cut(s) 510, 819, 1540, 1934, 2487, 2557, 2581
CaiI CAGNNNCTG 1 cut(s) 1780
CciI TCATGA 2 cut(s) 1107, 1786
CfoI GCGC 3 cut(s) 18, 49, 2572
Cfr13I GGNCC 1 cut(s) 270
CseI GACGC 3 cut(s) 1119, 2222, 2478
Csp6I GTAC 6 cut(s) 59, 142, 687, 1154, 2219, 2290
CspCI CAANNNNNGTGG 2 cut(s) 1257, 1292
CviQI GTAC 6 cut(s) 59, 142, 687, 1154, 2219, 2290
DrdI GACNNNNNNGTC 1 cut(s) 2656
DseDI GACNNNNNNGTC 1 cut(s) 2656
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
Eco130I CCWWGG 1 cut(s) 2547
Eco31I GGTCTC 1 cut(s) 2642
Eco32I GATATC 1 cut(s) 2684
Eco57I CTGAAG 5 cut(s) 699, 1275, 2055, 2295, 2495
EcoRII CCWGG 3 cut(s) 108, 453, 2263
EcoRV GATATC 1 cut(s) 2684
EcoT14I CCWWGG 1 cut(s) 2547
EcoT22I ATGCAT 3 cut(s) 393, 505, 1118
ErhI CCWWGG 1 cut(s) 2547
FauI CCCGC 2 cut(s) 1925, 2552
FauNDI CATATG 1 cut(s) 1491
FbaI TGATCA 1 cut(s) 1321
FblI GTMKAC 1 cut(s) 1732
Fnu4HI GCNGC 3 cut(s) 1303, 2388, 2553
FokI GGATG 9 cut(s) 137, 514, 990, 1322, 1472, 1508, 2147, 2198, 2347
Fsp4HI GCNGC 3 cut(s) 1303, 2388, 2553
FspBI CTAG 3 cut(s) 186, 555, 2438
GlaI GCGC 3 cut(s) 17, 48, 2571
GluI GCNGC 3 cut(s) 1303, 2388, 2553
GsuI CTGGAG 3 cut(s) 92, 1942, 2176
HaeII RGCGCY 1 cut(s) 2573
HaeIII GGCC 2 cut(s) 272, 453
HapII CCGG 1 cut(s) 2652
HgaI GACGC 3 cut(s) 1119, 2222, 2478
HhaI GCGC 3 cut(s) 18, 49, 2572
Hin6I GCGC 3 cut(s) 16, 47, 2570
HinP1I GCGC 3 cut(s) 16, 47, 2570
HincII GTYRAC 1 cut(s) 850
HindII GTYRAC 1 cut(s) 850
HindIII AAGCTT 5 cut(s) 180, 240, 1595, 2432, 2577
HpaII CCGG 1 cut(s) 2652
HphI GGTGA 7 cut(s) 248, 979, 1160, 1603, 2365, 2438, 2474
Hpy166II GTNNAC 3 cut(s) 850, 1399, 1733
Hpy8I GTNNAC 3 cut(s) 850, 1399, 1733
Hpy99I CGWCG 1 cut(s) 876
HpyAV CCTTC 9 cut(s) 153, 972, 1194, 1295, 1444, 1514, 1717, 2058, 2553
HpyCH4III ACNGT 3 cut(s) 866, 1384, 1755
HpyCH4IV ACGT 5 cut(s) 1735, 1831, 2178, 2288, 2448
HpyF10VI GCNNNNNNNGC 5 cut(s) 509, 835, 1979, 2102, 2576
HpySE526I ACGT 5 cut(s) 1735, 1831, 2178, 2288, 2448
HspAI GCGC 3 cut(s) 16, 47, 2570
KpnI GGTACC 1 cut(s) 690
Ksp22I TGATCA 1 cut(s) 1321
LmnI GCTCC 9 cut(s) 91, 111, 649, 814, 1052, 1514, 1868, 2195, 2562
Lsp1109I GCAGC 3 cut(s) 1314, 2399, 2539
LweI GCATC 8 cut(s) 282, 730, 1450, 1792, 1981, 2197, 2515, 2603
MaeI CTAG 3 cut(s) 186, 555, 2438
MaeII ACGT 5 cut(s) 1735, 1831, 2178, 2288, 2448
MaeIII GTNAC 5 cut(s) 523, 725, 1341, 2038, 2284
MbiI CCGCTC 1 cut(s) 86
MfeI CAATTG 1 cut(s) 760
MflI RGATCY 6 cut(s) 284, 409, 904, 1281, 1653, 1660
MhlI GDGCHC 1 cut(s) 2672
MlyI GAGTC 2 cut(s) 222, 1891
MmeI TCCRAC 2 cut(s) 144, 363
Mph1103I ATGCAT 3 cut(s) 393, 505, 1118
MroXI GAANNNNTTC 2 cut(s) 795, 2433
MseI TTAA 8 cut(s) 279, 483, 494, 1938, 1977, 2075, 2319, 2700
MslI CAYNNNNRTG 7 cut(s) 347, 513, 992, 1494, 1589, 2133, 2421
MspCI CTTAAG 1 cut(s) 1937
MspI CCGG 1 cut(s) 2652
MspR9I CCNGG 4 cut(s) 110, 455, 2265, 2653
MunI CAATTG 1 cut(s) 760
Mva1269I GAATGC 2 cut(s) 1132, 1892
MvaI CCWGG 3 cut(s) 110, 455, 2265
MvnI CGCG 6 cut(s) 16, 47, 57, 65, 1932, 2559
MwoI GCNNNNNNNGC 5 cut(s) 509, 835, 1979, 2102, 2576
NciI CCSGG 1 cut(s) 2653
NdeI CATATG 1 cut(s) 1491
NlaIV GGNNCC 5 cut(s) 688, 1089, 1205, 2191, 2262
NmuCI GTSAC 3 cut(s) 725, 2038, 2284
NsiI ATGCAT 3 cut(s) 393, 505, 1118
NspI RCATGY 3 cut(s) 512, 1542, 1630
OliI CACNNNNGTG 1 cut(s) 992
PaeI GCATGC 2 cut(s) 512, 1542
PagI TCATGA 2 cut(s) 1107, 1786
PciI ACATGT 1 cut(s) 1626
PcsI WCGNNNNNNNCGW 1 cut(s) 2294
PctI GAATGC 2 cut(s) 1132, 1892
PdmI GAANNNNTTC 2 cut(s) 795, 2433
PflFI GACNNNGTC 2 cut(s) 1382, 1403
PflMI CCANNNNNTGG 1 cut(s) 267
PkrI GCNGC 3 cut(s) 1304, 2389, 2554
PleI GAGTC 2 cut(s) 222, 1890
PpsI GAGTC 2 cut(s) 222, 1890
Ppu21I YACGTR 1 cut(s) 1736
PscI ACATGT 1 cut(s) 1626
Psp6I CCWGG 3 cut(s) 108, 453, 2263
PspGI CCWGG 3 cut(s) 108, 453, 2263
PspN4I GGNNCC 5 cut(s) 688, 1089, 1205, 2191, 2262
PspPI GGNCC 1 cut(s) 270
PstI CTGCAG 2 cut(s) 226, 2098
PstNI CAGNNNCTG 1 cut(s) 1780
PsuI RGATCY 6 cut(s) 284, 409, 904, 1281, 1653, 1660
PsyI GACNNNGTC 2 cut(s) 1382, 1403
RsaI GTAC 6 cut(s) 60, 143, 688, 1155, 2220, 2291
RsaNI GTAC 6 cut(s) 59, 142, 687, 1154, 2219, 2290
RseI CAYNNNNRTG 7 cut(s) 347, 513, 992, 1494, 1589, 2133, 2421
SaqAI TTAA 8 cut(s) 279, 483, 494, 1938, 1977, 2075, 2319, 2700
SatI GCNGC 3 cut(s) 1303, 2388, 2553
Sau96I GGNCC 1 cut(s) 270
ScaI AGTACT 2 cut(s) 143, 2220
SchI GAGTC 2 cut(s) 222, 1891
ScrFI CCNGG 4 cut(s) 110, 455, 2265, 2653
SduI GDGCHC 1 cut(s) 2672
SfaNI GCATC 8 cut(s) 282, 730, 1450, 1792, 1981, 2197, 2515, 2603
SfcI CTRYAG 3 cut(s) 222, 1392, 2094
SmiMI CAYNNNNRTG 7 cut(s) 347, 513, 992, 1494, 1589, 2133, 2421
SmlI CTYRAG 5 cut(s) 1238, 1267, 1649, 1937, 2087
SmoI CTYRAG 5 cut(s) 1238, 1267, 1649, 1937, 2087
SphI GCATGC 2 cut(s) 512, 1542
SsiI CCGC 5 cut(s) 14, 65, 84, 1932, 2559
SspMI CTAG 3 cut(s) 186, 555, 2438
StyD4I CCNGG 4 cut(s) 108, 453, 2263, 2651
StyI CCWWGG 1 cut(s) 2547
TaaI ACNGT 3 cut(s) 866, 1384, 1755
TaiI ACGT 5 cut(s) 1738, 1834, 2181, 2291, 2451
TaqI TCGA 5 cut(s) 380, 1016, 1217, 2636, 2693
TatI WGTACW 3 cut(s) 141, 1153, 2218
Tru1I TTAA 8 cut(s) 279, 483, 494, 1938, 1977, 2075, 2319, 2700
Tru9I TTAA 8 cut(s) 279, 483, 494, 1938, 1977, 2075, 2319, 2700
TscAI CASTG 3 cut(s) 1281, 1331, 1387
TseFI GTSAC 3 cut(s) 725, 2038, 2284
TseI GCWGC 3 cut(s) 1302, 2387, 2552
Tsp45I GTSAC 3 cut(s) 725, 2038, 2284
TspDTI ATGAA 8 cut(s) 1124, 1217, 1277, 1578, 1593, 1652, 2457, 2715
TspGWI ACGGA 3 cut(s) 246, 629, 860
TspRI CASTG 3 cut(s) 1281, 1331, 1387
Tth111I GACNNNGTC 2 cut(s) 1382, 1403
Van91I CCANNNNNTGG 1 cut(s) 267
Vha464I CTTAAG 1 cut(s) 1937
XapI RAATTY 6 cut(s) 419, 671, 1675, 1767, 1795, 2702
XbaI TCTAGA 1 cut(s) 185
XceI RCATGY 3 cut(s) 512, 1542, 1630
XmiI GTMKAC 1 cut(s) 1732
XmnI GAANNNNTTC 2 cut(s) 795, 2433
XspI CTAG 3 cut(s) 186, 555, 2438
ZrmI AGTACT 2 cut(s) 143, 2220
Zsp2I ATGCAT 3 cut(s) 393, 505, 1118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.