Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0012421

Physical Location & Seq

Genomic Coordinates Forward (+)

21026011 .. 21028447

Gene Structure 2437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g28010.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGATAAAAAGACGGAAGAAAACAATGGAGTCCGCGAAACTAGTATCCCTCTTAAGAACATGCATCACTTGCAAGTCTGTGACAGCAGCCAAGCTCATCCACCAGAAGATACTCACCCAAGGCCTCCAAAACAACACCCTCCTCTCCAAAACCCTCATCGACTTGTACTTCTCTTGCCACTTATACCCTGCTGCAAAGCTTGTTTTCCACTCCATCCCAAACCCATCCACCATTTCCCTCTGGAATTCTCTCATGACGGCCTACACCAACCACCATATGTTCATTGACGCTCTTGAGCTCTATGACAAGTTACTGCGCTGCCCCTATCTGGGTCCCGATAGTTACACCTACCCAAGTGTTCTCAAGGCCTGTGCTGCATTGGGTAGAGTCGGTATTGGAAGGATGATCCATAACCATTTGGTGAAGACTGGTTTCGTATCGGATATCGTTGTGGCCAGCTCGCTTGTGGGAATGTACGCGAAATGCAGTGTGTTTGGTTGTGCAATCCAGCTGTTTGATGAAATGCCTCAAAGAGATGTGGCGTGTTGGAATGCTGTCATTTCTTGTTATTATCAAGATGGGCAAACTGACAAGGCAATGGAGATGTATGACAAGATGACGACTTCCGGGTTTGAGCCTAATGTAGTAACGATTACCACTGTAATTTCATCATGTGCAAGACTTCTGGATTTGGAGAGGGGCAGGGAGATTCATAAGGCGTTGATTCAAAATCGAGTCGATTTGGATTGCTTTGCTAGTTCTGCTCTGGTGGACATGTATGGGAAATGTGGATGTTTAGATATGGCAAAAGAGGTCTTCGAACAAGTCCCCAGAAAGAATGTCATTGCTTGGAATTCTATGATTGCAGCCTATAGTGTAACAGGTGACAGTAAATCTTGTGTTGGTCTTTTAAGAAGGATGATAGATGAAGGAACTAGTCCTTCTTTGATTACTTTTAGCAGCATTTTGTTGGCTTGTTCAAGATCGCTCCAACTTCAACACGGAAAATTCATGCATGGATATATGATAAGGAACTGCGTAGAGGCTGATATCTATATTTACAGCTTGCTTATTGATCTCTACTTCGAGTGTGGAAGTATCTCGTCTGCTGAAAATGTATTTGAAAAGATGCCCAAGACAAATGTGGTTTCTTGGAATGTTATGATTTCTGGATTTGTGAAAGCGGGCAATTATTTCGGGGCTTTAGGTATATATGATGAGATGATAGAAGCTGGTGTAAGGCCAAACGACATCACAGTAACTAGTATCTTATCGGCTTGTTCACAGCTAACAGCACTGGAAAAGGGTAAGGAGATTCACAGAACTCTTGTTGATAGTGAGTTGGAAACCAATGAAATAGTCATGGGGTCTCTCCTTGACATGTATGCTAAATGTGGTGCCGTGGATGAAGCACTTAATGTTTTCAATAAGTTACCTAGTAGAGATCTTGTGTCATGGACCTCTATGATCGCGGCTTATGGGTCTCATGGTCAGGCTAAAGAGGCTTTAAAGCTTTTCGATGAAATGCAACAGTCCAATGCAAAACCAGATGGAGTTACTCTTCTTGCAGTGCTATCCGCTTGTAGCCACGTTGGACTTGTCGATGAAGGTTGGCATTATTTCAATCAAATGATCAGTAAATATGGGATTGAACCGAGAATAGAACATTACTCTTGCTTAATAGATCTTCTTGGACGTGCTGGTAGGTTGAACGAAGCTTACCAAATCATCCAAAGAACTCCACAAATTAGGGAGGATGTTCAGTTGTTAAGTACACTATTGTCTGCATGTCTTTTGTATAGAGATCATGATTTGGGTCTAAATATTGCAAGATTGCTAGTTGAGAAGAATCCTGATGATCATTCAACATACATTATGTTATCACATAGTCTTGCTTCTGGAAACAAATGGAATGAGATGCGGAAGGTTAGACTAAAGATGAAAGAACTGGGATTAAGGAAAAATCCTGGGTGTAGCTGGATCGAGGTTAACAGGAGGATCCAGTATTTCTTTGTTCAAGACAAGTCCCACCCAGAATCTGAAATGGTCTATCAGTGTCTCAAACTTCTCAAGACTCATATGGATGGAGATGAGTTAGTTTCACACTGGGGATCAGCAATAATCCATACTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00440 ko00564 ko01100 ko05231 map00440 map00564 map01100 map05231

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

712

Amino Acids

79.73

Weight (kDa)

7.05

Isoelectric Point (pI)

41.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	178 - 227	1.3e-13	PPR repeat family
PPR	PF01535	182 - 211	6.9e-07	PPR repeat
PPR_2	PF13041	279 - 327	1.7e-07	PPR repeat family
PPR_2	PF13041	381 - 428	4.1e-12	PPR repeat family
PPR	PF01535	383 - 413	2.4e-08	PPR repeat
PPR_2	PF13041	482 - 529	3.7e-11	PPR repeat family
PPR	PF01535	484 - 512	6.5e-09	PPR repeat
E_motif	PF20431	600 - 662	9.3e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27110
fragaria_vesca	FvH4_3g28010
malus_domestica	MD03G1167900.v1.1
prunus_persica	Prupe.4G268300_v2.0.a1
pyrus_communis	pycom03g12310
rosa_chinensis	RchiOBHm_Chr3g0448241
rosa_laevigata	RLG00000025934
rosa_multiflora	Rmu_co8274213.1_g000001 Rmu_sc0005582.1_g000002 Rmu_sc0005969.1_g000039 Rmu_sc0005969.1_g000046 Rmu_sc0016487.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426370
rosa_rugosa	Rorug02G0609300
rosa_samantha	Rh3AG009100 Rh3BG008700 Rh3CG008800 Rh3DG009400
rosa_wichuraiana	Rw3G000740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1397
AccII	CGCG	3 cut(s)	35, 479, 1472
AciI	CCGC	5 cut(s)	33, 1184, 1472, 1578, 1921
AclWI	GGATC	5 cut(s)	400, 1988, 1993, 2006, 2119
AcoI	YGGCCR	1 cut(s)	453
AcsI	RAATTY	3 cut(s)	244, 853, 1007
AfaI	GTAC	3 cut(s)	167, 476, 1774
AfiI	CCNNNNNNNGG	2 cut(s)	328, 329
AflII	CTTAAG	1 cut(s)	52
AflIII	ACRYGT	2 cut(s)	774, 1380
AhlI	ACTAGT	3 cut(s)	40, 935, 1262
AjiI	CACGTC	1 cut(s)	1697
AjnI	CCWGG	1 cut(s)	1966
Alw21I	GWGCWC	1 cut(s)	300
Alw26I	GTCTC	3 cut(s)	1374, 1488, 2063
AlwI	GGATC	5 cut(s)	400, 1988, 1993, 2006, 2119
AlwNI	CAGNNNCTG	1 cut(s)	2039
AoxI	GGCC	5 cut(s)	121, 258, 366, 453, 1241
ApeKI	GCWGC	6 cut(s)	86, 191, 318, 374, 866, 960
ApoI	RAATTY	3 cut(s)	244, 853, 1007
AspLEI	GCGC	1 cut(s)	318
AspS9I	GGNCC	2 cut(s)	332, 1458
AsuC2I	CCSGG	1 cut(s)	628
AsuHPI	GGTGA	3 cut(s)	106, 433, 896
AsuII	TTCGAA	1 cut(s)	819
AvaII	GGWCC	2 cut(s)	332, 1458
BalI	TGGCCA	1 cut(s)	455
BamHI	GGATCC	1 cut(s)	1998
BanI	GGYRCC	1 cut(s)	1397
BanII	GRGCYC	1 cut(s)	300
BbsI	GAAGAC	2 cut(s)	431, 808
Bbv12I	GWGCWC	1 cut(s)	300
BbvI	GCAGC	6 cut(s)	98, 178, 305, 361, 878, 972
BccI	CCATC	5 cut(s)	221, 232, 572, 1544, 2078
BceAI	ACGGC	2 cut(s)	273, 1385
BcgI	CGANNNNNNTGC	2 cut(s)	1177, 1211
BciT130I	CCWGG	1 cut(s)	1968
BciVI	GTATCC	1 cut(s)	55
BclI	TGATCA	2 cut(s)	1632, 1858
BcnI	CCSGG	1 cut(s)	628
BcoDI	GTCTC	3 cut(s)	1374, 1488, 2063
BcuI	ACTAGT	3 cut(s)	40, 935, 1262
BfaI	CTAG	6 cut(s)	41, 756, 936, 1263, 1437, 1838
BfmI	CTRYAG	1 cut(s)	871
BfrI	CTTAAG	1 cut(s)	52
BfuI	GTATCC	1 cut(s)	55
BglII	AGATCT	2 cut(s)	1444, 1684
BisI	GCNGC	7 cut(s)	87, 192, 319, 375, 867, 961, 1473
BlsI	GCNGC	7 cut(s)	88, 193, 320, 376, 868, 962, 1474
Bme1390I	CCNGG	2 cut(s)	628, 1968
Bme18I	GGWCC	2 cut(s)	332, 1458
BmgBI	CACGTC	1 cut(s)	1697
BmgT120I	GGNCC	2 cut(s)	332, 1458
BmiI	GGNNCC	4 cut(s)	333, 334, 1399, 2000
BmrFI	CCNGG	2 cut(s)	628, 1968
BmrI	ACTGGG	2 cut(s)	1958, 2116
BmsI	GCATC	3 cut(s)	72, 1119, 1908
BmuI	ACTGGG	2 cut(s)	1958, 2116
BpiI	GAAGAC	2 cut(s)	431, 808
Bpu14I	TTCGAA	1 cut(s)	819
BpuEI	CTTGAG	3 cut(s)	314, 347, 2054
BpuMI	CCSGG	1 cut(s)	628
BsaI	GGTCTC	2 cut(s)	1374, 1488
BsaJI	CCNNGG	3 cut(s)	118, 1401, 1967
Bsc4I	CCNNNNNNNGG	2 cut(s)	328, 329
Bse1I	ACTGG	5 cut(s)	433, 1302, 1953, 2002, 2111
Bse3DI	GCAATG	2 cut(s)	603, 843
BseBI	CCWGG	1 cut(s)	1968
BseDI	CCNNGG	3 cut(s)	118, 1401, 1967
BseLI	CCNNNNNNNGG	2 cut(s)	328, 329
BseMI	GCAATG	2 cut(s)	603, 843
BseNI	ACTGG	5 cut(s)	433, 1302, 1953, 2002, 2111
BseRI	GAGGAG	1 cut(s)	131
BseXI	GCAGC	6 cut(s)	98, 178, 305, 361, 878, 972
Bsh1236I	CGCG	3 cut(s)	35, 479, 1472
BshFI	GGCC	5 cut(s)	123, 260, 368, 455, 1243
BshNI	GGYRCC	1 cut(s)	1397
BsiHKAI	GWGCWC	1 cut(s)	300
BsiSI	CCGG	1 cut(s)	627
BslFI	GGGAC	3 cut(s)	318, 812, 2011
BslI	CCNNNNNNNGG	2 cut(s)	328, 329
BsmAI	GTCTC	3 cut(s)	1374, 1488, 2063
BsmFI	GGGAC	3 cut(s)	318, 812, 2011
BsmI	GAATGC	1 cut(s)	556
BsnI	GGCC	5 cut(s)	123, 260, 368, 455, 1243
Bso31I	GGTCTC	2 cut(s)	1374, 1488
Bsp119I	TTCGAA	1 cut(s)	819
Bsp1286I	GDGCHC	1 cut(s)	300
BspACI	CCGC	5 cut(s)	33, 1184, 1472, 1578, 1921
BspANI	GGCC	5 cut(s)	123, 260, 368, 455, 1243
BspFNI	CGCG	3 cut(s)	35, 479, 1472
BspHI	TCATGA	2 cut(s)	252, 1807
BspLI	GGNNCC	4 cut(s)	333, 334, 1399, 2000
BspPI	GGATC	5 cut(s)	400, 1988, 1993, 2006, 2119
BspT104I	TTCGAA	1 cut(s)	819
BspT107I	GGYRCC	1 cut(s)	1397
BspTI	CTTAAG	1 cut(s)	52
BspTNI	GGTCTC	2 cut(s)	1374, 1488
BsrDI	GCAATG	2 cut(s)	603, 843
BsrI	ACTGG	5 cut(s)	433, 1302, 1953, 2002, 2111
BssECI	CCNNGG	3 cut(s)	118, 1401, 1967
BssT1I	CCWWGG	1 cut(s)	118
Bst2UI	CCWGG	1 cut(s)	1968
Bst4CI	ACNGT	4 cut(s)	661, 890, 1258, 1533
Bst6I	CTCTTC	1 cut(s)	1566
BstAFI	CTTAAG	1 cut(s)	52
BstAPI	GCANNNNNTGC	1 cut(s)	69
BstBI	TTCGAA	1 cut(s)	819
BstC8I	GCNNGC	4 cut(s)	457, 461, 1067, 1186
BstDSI	CCRYGG	1 cut(s)	1401
BstFNI	CGCG	3 cut(s)	35, 479, 1472
BstHHI	GCGC	1 cut(s)	318
BstMAI	GTCTC	3 cut(s)	1374, 1488, 2063
BstMWI	GCNNNNNNNGC	4 cut(s)	69, 374, 761, 1502
BstNI	CCWGG	1 cut(s)	1968
BstNSI	RCATGY	4 cut(s)	63, 778, 1384, 1791
BstSCI	CCNGG	2 cut(s)	626, 1966
BstSFI	CTRYAG	1 cut(s)	871
BstUI	CGCG	3 cut(s)	35, 479, 1472
BstV1I	GCAGC	6 cut(s)	98, 178, 305, 361, 878, 972
BstV2I	GAAGAC	2 cut(s)	431, 808
BstX2I	RGATCY	3 cut(s)	1444, 1684, 1998
BstYI	RGATCY	3 cut(s)	1444, 1684, 1998
BsuI	GTATCC	1 cut(s)	55
BsuRI	GGCC	5 cut(s)	123, 260, 368, 455, 1243
BtgI	CCRYGG	1 cut(s)	1401
BtrI	CACGTC	1 cut(s)	1697
BtsI	GCAGTG	2 cut(s)	493, 1575
BtsIMutI	CAGTG	6 cut(s)	493, 657, 1295, 1575, 2060, 2104
Cac8I	GCNNGC	4 cut(s)	457, 461, 1067, 1186
CaiI	CAGNNNCTG	1 cut(s)	2039
CciI	TCATGA	2 cut(s)	252, 1807
CfoI	GCGC	1 cut(s)	318
Cfr13I	GGNCC	2 cut(s)	332, 1458
CseI	GACGC	1 cut(s)	296
Csp6I	GTAC	3 cut(s)	166, 475, 1773
CviQI	GTAC	3 cut(s)	166, 475, 1773
DraI	TTTAAA	1 cut(s)	1509
EaeI	YGGCCR	1 cut(s)	453
Eam1104I	CTCTTC	1 cut(s)	1566
EarI	CTCTTC	1 cut(s)	1566
Ecl136II	GAGCTC	1 cut(s)	298
Eco130I	CCWWGG	1 cut(s)	118
Eco147I	AGGCCT	2 cut(s)	123, 368
Eco24I	GRGCYC	1 cut(s)	300
Eco31I	GGTCTC	2 cut(s)	1374, 1488
Eco32I	GATATC	2 cut(s)	445, 1051
Eco47I	GGWCC	2 cut(s)	332, 1458
Eco53kI	GAGCTC	1 cut(s)	298
EcoICRI	GAGCTC	1 cut(s)	298
EcoO109I	RGGNCCY	1 cut(s)	332
EcoRI	GAATTC	2 cut(s)	244, 853
EcoRII	CCWGG	1 cut(s)	1966
EcoRV	GATATC	2 cut(s)	445, 1051
EcoT14I	CCWWGG	1 cut(s)	118
EcoT22I	ATGCAT	2 cut(s)	65, 1017
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	1 cut(s)	118
FaqI	GGGAC	3 cut(s)	318, 812, 2011
FauI	CCCGC	1 cut(s)	1177
FauNDI	CATATG	2 cut(s)	276, 2079
FbaI	TGATCA	2 cut(s)	1632, 1858
Fnu4HI	GCNGC	7 cut(s)	87, 192, 319, 375, 867, 961, 1473
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	7 cut(s)	87, 192, 319, 375, 867, 961, 1473
FspBI	CTAG	6 cut(s)	41, 756, 936, 1263, 1437, 1838
GlaI	GCGC	1 cut(s)	317
GluI	GCNGC	7 cut(s)	87, 192, 319, 375, 867, 961, 1473
HaeIII	GGCC	5 cut(s)	123, 260, 368, 455, 1243
HapII	CCGG	1 cut(s)	627
HgaI	GACGC	1 cut(s)	296
HhaI	GCGC	1 cut(s)	318
Hin6I	GCGC	1 cut(s)	316
HinP1I	GCGC	1 cut(s)	316
HincII	GTYRAC	1 cut(s)	1990
HindII	GTYRAC	1 cut(s)	1990
HindIII	AAGCTT	3 cut(s)	197, 1511, 1716
HinfI	GANTC	9 cut(s)	29, 387, 709, 724, 735, 1315, 1849, 2036, 2074
HpaI	GTTAAC	1 cut(s)	1990
HpaII	CCGG	1 cut(s)	627
HphI	GGTGA	3 cut(s)	106, 433, 896
Hpy166II	GTNNAC	4 cut(s)	772, 1283, 1775, 1990
Hpy188I	TCNGA	2 cut(s)	442, 2041
Hpy8I	GTNNAC	4 cut(s)	772, 1283, 1775, 1990
HpyAV	CCTTC	6 cut(s)	393, 909, 923, 951, 1601, 1918
HpyCH4III	ACNGT	4 cut(s)	661, 890, 1258, 1533
HpyCH4IV	ACGT	2 cut(s)	1590, 1696
HpyF10VI	GCNNNNNNNGC	4 cut(s)	69, 374, 761, 1502
HpySE526I	ACGT	2 cut(s)	1590, 1696
HspAI	GCGC	1 cut(s)	316
KflI	GGGWCCC	1 cut(s)	332
Ksp22I	TGATCA	2 cut(s)	1632, 1858
KspAI	GTTAAC	1 cut(s)	1990
LmnI	GCTCC	1 cut(s)	993
Lsp1109I	GCAGC	6 cut(s)	98, 178, 305, 361, 878, 972
LweI	GCATC	3 cut(s)	72, 1119, 1908
MaeI	CTAG	6 cut(s)	41, 756, 936, 1263, 1437, 1838
MaeII	ACGT	2 cut(s)	1590, 1696
MaeIII	GTNAC	9 cut(s)	79, 309, 341, 646, 877, 884, 1258, 1431, 1555
MboII	GAAGA	7 cut(s)	28, 118, 436, 808, 1553, 1679, 1858
MflI	RGATCY	3 cut(s)	1444, 1684, 1998
MhlI	GDGCHC	1 cut(s)	300
MlsI	TGGCCA	1 cut(s)	455
MluCI	AATT	6 cut(s)	244, 663, 853, 1007, 1189, 1746
MluNI	TGGCCA	1 cut(s)	455
MlyI	GAGTC	4 cut(s)	38, 396, 744, 2068
MmeI	TCCRAC	4 cut(s)	527, 1015, 1323, 1573
Mox20I	TGGCCA	1 cut(s)	455
Mph1103I	ATGCAT	2 cut(s)	65, 1017
MscI	TGGCCA	1 cut(s)	455
MseI	TTAA	8 cut(s)	53, 911, 1416, 1508, 1679, 1769, 1955, 1989
MslI	CAYNNNNRTG	1 cut(s)	2082
Msp20I	TGGCCA	1 cut(s)	455
MspA1I	CMGCKG	1 cut(s)	511
MspCI	CTTAAG	1 cut(s)	52
MspI	CCGG	1 cut(s)	627
MspR9I	CCNGG	2 cut(s)	628, 1968
Mva1269I	GAATGC	1 cut(s)	556
MvaI	CCWGG	1 cut(s)	1968
MvnI	CGCG	3 cut(s)	35, 479, 1472
MwoI	GCNNNNNNNGC	4 cut(s)	69, 374, 761, 1502
NciI	CCSGG	1 cut(s)	628
NdeI	CATATG	2 cut(s)	276, 2079
NlaIV	GGNNCC	4 cut(s)	333, 334, 1399, 2000
NmuCI	GTSAC	2 cut(s)	79, 884
NsiI	ATGCAT	2 cut(s)	65, 1017
NspI	RCATGY	4 cut(s)	63, 778, 1384, 1791
NspV	TTCGAA	1 cut(s)	819
PagI	TCATGA	2 cut(s)	252, 1807
PceI	AGGCCT	2 cut(s)	123, 368
PciI	ACATGT	2 cut(s)	774, 1380
PctI	GAATGC	1 cut(s)	556
PfeI	GAWTC	5 cut(s)	709, 724, 1315, 1849, 2036
PkrI	GCNGC	7 cut(s)	88, 193, 320, 376, 868, 962, 1474
PleI	GAGTC	4 cut(s)	37, 395, 743, 2068
PpsI	GAGTC	4 cut(s)	37, 395, 743, 2068
PpuMI	RGGWCCY	1 cut(s)	332
PscI	ACATGT	2 cut(s)	774, 1380
Psp124BI	GAGCTC	1 cut(s)	300
Psp5II	RGGWCCY	1 cut(s)	332
Psp6I	CCWGG	1 cut(s)	1966
PspGI	CCWGG	1 cut(s)	1966
PspN4I	GGNNCC	4 cut(s)	333, 334, 1399, 2000
PspPI	GGNCC	2 cut(s)	332, 1458
PspPPI	RGGWCCY	1 cut(s)	332
PsrI	GAACNNNNNNTAC	2 cut(s)	1703, 1735
PstNI	CAGNNNCTG	1 cut(s)	2039
PsuI	RGATCY	3 cut(s)	1444, 1684, 1998
PvuII	CAGCTG	1 cut(s)	511
RsaI	GTAC	3 cut(s)	167, 476, 1774
RsaNI	GTAC	3 cut(s)	166, 475, 1773
RseI	CAYNNNNRTG	1 cut(s)	2082
SacI	GAGCTC	1 cut(s)	300
SaqAI	TTAA	8 cut(s)	53, 911, 1416, 1508, 1679, 1769, 1955, 1989
SatI	GCNGC	7 cut(s)	87, 192, 319, 375, 867, 961, 1473
Sau96I	GGNCC	2 cut(s)	332, 1458
SchI	GAGTC	4 cut(s)	38, 396, 744, 2068
ScrFI	CCNGG	2 cut(s)	628, 1968
SduI	GDGCHC	1 cut(s)	300
SfaNI	GCATC	3 cut(s)	72, 1119, 1908
SfcI	CTRYAG	1 cut(s)	871
SfuI	TTCGAA	1 cut(s)	819
SinI	GGWCC	2 cut(s)	332, 1458
SmiMI	CAYNNNNRTG	1 cut(s)	2082
SmlI	CTYRAG	4 cut(s)	52, 293, 362, 2069
SmoI	CTYRAG	4 cut(s)	52, 293, 362, 2069
SpeI	ACTAGT	3 cut(s)	40, 935, 1262
Sse9I	AATT	6 cut(s)	244, 663, 853, 1007, 1189, 1746
SseBI	AGGCCT	2 cut(s)	123, 368
SsiI	CCGC	5 cut(s)	33, 1184, 1472, 1578, 1921
SspI	AATATT	1 cut(s)	1825
SspMI	CTAG	6 cut(s)	41, 756, 936, 1263, 1437, 1838
SstI	GAGCTC	1 cut(s)	300
StuI	AGGCCT	2 cut(s)	123, 368
StyD4I	CCNGG	2 cut(s)	626, 1966
StyI	CCWWGG	1 cut(s)	118
TaaI	ACNGT	4 cut(s)	661, 890, 1258, 1533
TaiI	ACGT	2 cut(s)	1593, 1699
TaqI	TCGA	8 cut(s)	159, 733, 738, 819, 1086, 1518, 1602, 1983
TasI	AATT	6 cut(s)	244, 663, 853, 1007, 1189, 1746
TatI	WGTACW	2 cut(s)	165, 1772
TauI	GCSGC	1 cut(s)	1475
TfiI	GAWTC	5 cut(s)	709, 724, 1315, 1849, 2036
Tru1I	TTAA	8 cut(s)	53, 911, 1416, 1508, 1679, 1769, 1955, 1989
Tru9I	TTAA	8 cut(s)	53, 911, 1416, 1508, 1679, 1769, 1955, 1989
TscAI	CASTG	6 cut(s)	493, 664, 1302, 1575, 2060, 2111
TseFI	GTSAC	2 cut(s)	79, 884
TseI	GCWGC	6 cut(s)	86, 191, 318, 374, 866, 960
Tsp45I	GTSAC	2 cut(s)	79, 884
TspGWI	ACGGA	2 cut(s)	28, 1017
TspRI	CASTG	6 cut(s)	493, 664, 1302, 1575, 2060, 2111
Vha464I	CTTAAG	1 cut(s)	52
VpaK11BI	GGWCC	2 cut(s)	332, 1458
XapI	RAATTY	3 cut(s)	244, 853, 1007
XceI	RCATGY	4 cut(s)	63, 778, 1384, 1791
XcmI	CCANNNNNNNNNTGG	2 cut(s)	463, 1141
XspI	CTAG	6 cut(s)	41, 756, 936, 1263, 1437, 1838
Zsp2I	ATGCAT	2 cut(s)	65, 1017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.