Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0012421

Physical Location & Seq

Genomic Coordinates Forward (+)

72609239 .. 72612042

Gene Structure 2804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0609300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGGCCGTGGTGCCGGACTTTGTTCTAGACAAAGCATTCGAAGCCGTGTATGTTGGCGTTCAAGACCTGATCGTCAAGAATTTCATTTTTAAGTCTCTCTTCAACGACGTCAAATCCAGGCTCGATGATTTGGCACCACTGATCAAGGAGATGACGCAATATAACCAGAAAATGAATCGCCCAGAGAAGGAACTGGAAGCTTTAAAGGGAGTCATGGAGAAAGGCCAAGAGCTCGTCAACAAGTGCTCAACGATTACGCGATGGAGCCCCTTCAAAAAGTACAAGTACGCCAGGAAACTTCTCCAATGGCAGGAATCTCTTAAAACACCGTTGGAGAGACTCAAGGTTCAAGAATTAGGGCAGATAATGAGGATCGATGTCGCGGTTGATGATATTCATCGCATGATGCTGAAACAAAAATCCGCAGAAAGTTCAGGTAGGACACGACTCGAACTTCCACCACTTCCGCTGCTTATAGTTGGACTGGATAGTCCTTTGAATGATTTGAAGAAAAAGCTTCTTGCGGATGATGGGGTGTCGAGGCTTGTGCTCACTGCTCCTGGAGGCTGTGGGAAAACCACTCTCGCCACAATGTTTTGTCAAGATAAAGAGGTCAAAGGTAAAGTCAAGGACAATATTATCTTCATTACTGTTTCACAAAAAGGCAATTTGGAACTTGTTGTGAAACGACTTTGTGAATCCGAGAGTTCTCCAATCACTACTTTCCAAAACAAAGTGCATATGCTTCAATGGATGCAAACATTTTTCAAGGGAAGACAAGATCCTTTGCTATTGGTCCTCGATGATATTTGGTCTGGATCAGAATCCATTCTTCAGAGCTTTCAATTTGAAATGTCCAATTACAAGATTTTAGTAACATCAAGATCTGAATTTCCAAATTTTGGTTCTTCATATCATTTAAAATTATTGAATGATGACAAAGCAATGGAACTTTTTTGTCACTCAGCATCATTGGGAGATAAGTGCTCTCCTGAACGAGAAGAACTCTCAAGAAAGATAGTAAAGCGTTGCAACGGATTTCCACTTGCTATTACAGTGGTTGGAAGATCACTTTCTGGGCAACCTATAGAGGTCTGGAGAAAAAGAGTATTTGAATGGTCTAAAGATTCTTGTATTCTTGATGCTGAGACGGAATTGTTTCTTTGTCTCCAAAGCAGCTTAGATGCTTTGGATAAAAGACTTGCAATTGTCAAGGATTGTTACTTGGACCTGGGATCTTTTCCTGAAGACAAAGAAATCCGAGTTGATGACCTCATTGATATGTGGGCAGAGTTATATGATATAGATGATGACAGTGTGTGCTTTGCAAATGTCTACGAACTTGCCAATAGGAATCTGGCTAATCTGGTTGACAAAAGGCGGAGCGATATGAAGATGGAGGGGGACGATTTCTACGGTCAACGGTTTGTGACCCAACATGATTTGCTTAGAGAGCTAGCTATTTACAATGCTAAGCTAGACCCGGTAGAGCAAAGAAAAAGAATGAACATAGAAATAAGGGGAAAAAAAATCCCCAAGTGGTGGAGAGAACAAGAATGTCACCCCATCAAGGCTCGCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00440 ko00564 ko01100 ko05231 map00440 map00564 map01100 map05231

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

527

Amino Acids

60.79

Weight (kDa)

7.85

Isoelectric Point (pI)

46.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	9 - 109	9.9e-19	Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC	PF00931	164 - 323	7.3e-16	NB-ARC domain
AAA_22	PF13401	182 - 270	6.3e-07	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27110
fragaria_vesca	FvH4_3g28010
malus_domestica	MD03G1167900.v1.1
prunus_persica	Prupe.4G268300_v2.0.a1
pyrus_communis	pycom03g12310
rosa_chinensis	RchiOBHm_Chr3g0448241
rosa_laevigata	RLG00000025934
rosa_multiflora	Rmu_co8274213.1_g000001 Rmu_sc0005582.1_g000002 Rmu_sc0005969.1_g000039 Rmu_sc0005969.1_g000046 Rmu_sc0016487.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426370
rosa_rugosa	Rorug02G0609300
rosa_samantha	Rh3AG009100 Rh3BG008700 Rh3CG008800 Rh3DG009400
rosa_wichuraiana	Rw3G000740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	71, 489
AatII	GACGTC	1 cut(s)	111
AccB1I	GGYRCC	2 cut(s)	10, 133
AccB7I	CCANNNNNTGG	2 cut(s)	902, 1542
AccI	GTMKAC	1 cut(s)	1335
AccII	CGCG	2 cut(s)	259, 383
AciI	CCGC	5 cut(s)	383, 423, 467, 524, 1381
AclWI	GGATC	4 cut(s)	380, 776, 826, 1243
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	79, 890, 898
AcuI	CTGAAG	2 cut(s)	818, 1266
AcyI	GRCGYC	1 cut(s)	108
AfaI	GTAC	2 cut(s)	281, 287
AfiI	CCNNNNNNNGG	5 cut(s)	187, 310, 902, 1542, 1570
AjnI	CCWGG	4 cut(s)	116, 290, 559, 1230
AjuI	GAANNNNNNNTTGG	2 cut(s)	889, 921
AluBI	AGCT	8 cut(s)	200, 232, 517, 840, 1179, 1456, 1460, 1477
AluI	AGCT	8 cut(s)	200, 232, 517, 840, 1179, 1456, 1460, 1477
Alw21I	GWGCWC	4 cut(s)	234, 248, 552, 989
Alw26I	GTCTC	4 cut(s)	99, 331, 1142, 1172
AlwI	GGATC	4 cut(s)	380, 776, 826, 1243
AoxI	GGCC	2 cut(s)	3, 223
ApeKI	GCWGC	2 cut(s)	469, 1176
ApoI	RAATTY	3 cut(s)	79, 890, 898
ArsI	GACNNNNNNTTYG	4 cut(s)	20, 52, 609, 641
Asp700I	GAANNNNTTC	2 cut(s)	828, 1158
AspS9I	GGNCC	2 cut(s)	796, 1228
AsuC2I	CCSGG	1 cut(s)	1484
AsuHPI	GGTGA	1 cut(s)	1553
AsuII	TTCGAA	1 cut(s)	39
AsuNHI	GCTAGC	1 cut(s)	1456
AvaII	GGWCC	2 cut(s)	796, 1228
BanI	GGYRCC	2 cut(s)	10, 133
BanII	GRGCYC	2 cut(s)	234, 269
BbsI	GAAGAC	2 cut(s)	781, 1254
Bbv12I	GWGCWC	4 cut(s)	234, 248, 552, 989
BbvI	GCAGC	2 cut(s)	456, 1188
BccI	CCATC	4 cut(s)	255, 524, 1390, 1574
BceAI	ACGGC	1 cut(s)	29
BcgI	CGANNNNNNTGC	2 cut(s)	529, 563
BciT130I	CCWGG	4 cut(s)	118, 292, 561, 1232
BclI	TGATCA	1 cut(s)	141
BcnI	CCSGG	1 cut(s)	1484
BcoDI	GTCTC	4 cut(s)	99, 331, 1142, 1172
BfaI	CTAG	3 cut(s)	26, 1457, 1478
BfmI	CTRYAG	1 cut(s)	1086
BglII	AGATCT	1 cut(s)	884
BisI	GCNGC	2 cut(s)	470, 1177
BlpI	GCTNAGC	1 cut(s)	1473
BlsI	GCNGC	2 cut(s)	471, 1178
Bme1390I	CCNGG	5 cut(s)	118, 292, 561, 1232, 1484
Bme18I	GGWCC	2 cut(s)	796, 1228
BmgT120I	GGNCC	2 cut(s)	796, 1228
BmiI	GGNNCC	3 cut(s)	12, 135, 266
BmrFI	CCNGG	5 cut(s)	118, 292, 561, 1232, 1484
BmsI	GCATC	5 cut(s)	396, 744, 977, 1132, 1174
BmtI	GCTAGC	1 cut(s)	1460
BpiI	GAAGAC	2 cut(s)	781, 1254
BplI	GAGNNNNNCTC	2 cut(s)	990, 1022
BpmI	CTGGAG	2 cut(s)	582, 1117
Bpu1102I	GCTNAGC	1 cut(s)	1473
Bpu14I	TTCGAA	1 cut(s)	39
BpuEI	CTTGAG	2 cut(s)	326, 994
BpuMI	CCSGG	1 cut(s)	1484
Bsa29I	ATCGAT	1 cut(s)	375
BsaBI	GATNNNNATC	2 cut(s)	396, 823
BsaHI	GRCGYC	1 cut(s)	108
BsaJI	CCNNGG	2 cut(s)	6, 1231
Bsc4I	CCNNNNNNNGG	5 cut(s)	187, 310, 902, 1542, 1570
Bse1I	ACTGG	2 cut(s)	198, 489
Bse3DI	GCAATG	1 cut(s)	951
Bse8I	GATNNNNATC	2 cut(s)	396, 823
BseBI	CCWGG	4 cut(s)	118, 292, 561, 1232
BseCI	ATCGAT	1 cut(s)	375
BseDI	CCNNGG	2 cut(s)	6, 1231
BseGI	GGATG	2 cut(s)	532, 759
BseJI	GATNNNNATC	2 cut(s)	396, 823
BseLI	CCNNNNNNNGG	5 cut(s)	187, 310, 902, 1542, 1570
BseMI	GCAATG	1 cut(s)	951
BseMII	CTCAG	2 cut(s)	978, 1137
BseNI	ACTGG	2 cut(s)	198, 489
BseXI	GCAGC	2 cut(s)	456, 1188
Bsh1236I	CGCG	2 cut(s)	259, 383
BshFI	GGCC	2 cut(s)	5, 225
BshNI	GGYRCC	2 cut(s)	10, 133
BshVI	ATCGAT	1 cut(s)	375
BsiHKAI	GWGCWC	4 cut(s)	234, 248, 552, 989
BsiSI	CCGG	2 cut(s)	14, 1484
BslFI	GGGAC	1 cut(s)	1418
BslI	CCNNNNNNNGG	5 cut(s)	187, 310, 902, 1542, 1570
BsmAI	GTCTC	4 cut(s)	99, 331, 1142, 1172
BsmBI	CGTCTC	1 cut(s)	1142
BsmFI	GGGAC	1 cut(s)	1418
BsmI	GAATGC	1 cut(s)	35
BsnI	GGCC	2 cut(s)	5, 225
Bsp119I	TTCGAA	1 cut(s)	39
Bsp1286I	GDGCHC	5 cut(s)	234, 248, 269, 552, 989
Bsp143I	GATC	8 cut(s)	69, 141, 372, 781, 818, 884, 1067, 1235
Bsp1720I	GCTNAGC	1 cut(s)	1473
BspACI	CCGC	5 cut(s)	383, 423, 467, 524, 1381
BspANI	GGCC	2 cut(s)	5, 225
BspCNI	CTCAG	2 cut(s)	977, 1138
BspDI	ATCGAT	1 cut(s)	375
BspFNI	CGCG	2 cut(s)	259, 383
BspLI	GGNNCC	3 cut(s)	12, 135, 266
BspOI	GCTAGC	1 cut(s)	1460
BspPI	GGATC	4 cut(s)	380, 776, 826, 1243
BspT104I	TTCGAA	1 cut(s)	39
BspT107I	GGYRCC	2 cut(s)	10, 133
BsrDI	GCAATG	1 cut(s)	951
BsrI	ACTGG	2 cut(s)	198, 489
BssECI	CCNNGG	2 cut(s)	6, 1231
BssMI	GATC	8 cut(s)	69, 141, 372, 781, 818, 884, 1067, 1235
BssNI	GRCGYC	1 cut(s)	108
Bst2UI	CCWGG	4 cut(s)	118, 292, 561, 1232
Bst4CI	ACNGT	6 cut(s)	330, 652, 1057, 1316, 1418, 1425
Bst6I	CTCTTC	1 cut(s)	104
BstACI	GRCGYC	1 cut(s)	108
BstBI	TTCGAA	1 cut(s)	39
BstC8I	GCNNGC	2 cut(s)	1458, 1576
BstDEI	CTNAG	5 cut(s)	964, 1146, 1180, 1448, 1473
BstDSI	CCRYGG	1 cut(s)	6
BstF5I	GGATG	2 cut(s)	532, 759
BstFNI	CGCG	2 cut(s)	259, 383
BstKTI	GATC	8 cut(s)	72, 144, 375, 784, 821, 887, 1070, 1238
BstMAI	GTCTC	4 cut(s)	99, 331, 1142, 1172
BstMBI	GATC	8 cut(s)	69, 141, 372, 781, 818, 884, 1067, 1235
BstMWI	GCNNNNNNNGC	2 cut(s)	41, 1453
BstNI	CCWGG	4 cut(s)	118, 292, 561, 1232
BstSCI	CCNGG	5 cut(s)	116, 290, 559, 1230, 1482
BstSFI	CTRYAG	1 cut(s)	1086
BstUI	CGCG	2 cut(s)	259, 383
BstV1I	GCAGC	2 cut(s)	456, 1188
BstV2I	GAAGAC	2 cut(s)	781, 1254
BstX2I	RGATCY	3 cut(s)	781, 884, 1235
BstYI	RGATCY	3 cut(s)	781, 884, 1235
Bsu15I	ATCGAT	1 cut(s)	375
BsuRI	GGCC	2 cut(s)	5, 225
BsuTUI	ATCGAT	1 cut(s)	375
BtgI	CCRYGG	1 cut(s)	6
BtgZI	GCGATG	2 cut(s)	274, 383
BtsCI	GGATG	2 cut(s)	532, 759
BtsI	GCAGTG	1 cut(s)	552
BtsIMutI	CAGTG	4 cut(s)	137, 552, 1062, 1321
Cac8I	GCNNGC	2 cut(s)	1458, 1576
Cfr13I	GGNCC	2 cut(s)	796, 1228
ClaI	ATCGAT	1 cut(s)	375
CseI	GACGC	1 cut(s)	163
Csp6I	GTAC	2 cut(s)	280, 286
CviAII	CATG	3 cut(s)	214, 403, 1439
CviQI	GTAC	2 cut(s)	280, 286
DdeI	CTNAG	5 cut(s)	964, 1146, 1180, 1448, 1473
DpnI	GATC	8 cut(s)	71, 143, 374, 783, 820, 886, 1069, 1237
DpnII	GATC	8 cut(s)	69, 141, 372, 781, 818, 884, 1067, 1235
DraI	TTTAAA	2 cut(s)	204, 921
DrdI	GACNNNNNNGTC	2 cut(s)	71, 489
DseDI	GACNNNNNNGTC	2 cut(s)	71, 489
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	104
EarI	CTCTTC	1 cut(s)	104
EciI	GGCGGA	1 cut(s)	1396
Ecl136II	GAGCTC	1 cut(s)	232
Eco24I	GRGCYC	2 cut(s)	234, 269
Eco47I	GGWCC	2 cut(s)	796, 1228
Eco53kI	GAGCTC	1 cut(s)	232
Eco57I	CTGAAG	2 cut(s)	818, 1266
EcoICRI	GAGCTC	1 cut(s)	232
EcoRII	CCWGG	4 cut(s)	116, 290, 559, 1230
EcoT38I	GRGCYC	2 cut(s)	234, 269
Esp3I	CGTCTC	1 cut(s)	1142
FaeI	CATG	3 cut(s)	217, 406, 1442
FalI	AAGNNNNNCTT	3 cut(s)	83, 115, 1562
FaqI	GGGAC	1 cut(s)	1418
FatI	CATG	3 cut(s)	213, 402, 1438
FauNDI	CATATG	1 cut(s)	741
FbaI	TGATCA	1 cut(s)	141
FblI	GTMKAC	1 cut(s)	1335
Fnu4HI	GCNGC	2 cut(s)	470, 1177
FokI	GGATG	2 cut(s)	539, 766
FriOI	GRGCYC	2 cut(s)	234, 269
Fsp4HI	GCNGC	2 cut(s)	470, 1177
FspBI	CTAG	3 cut(s)	26, 1457, 1478
GluI	GCNGC	2 cut(s)	470, 1177
GsuI	CTGGAG	2 cut(s)	582, 1117
HaeIII	GGCC	2 cut(s)	5, 225
HapII	CCGG	2 cut(s)	14, 1484
HgaI	GACGC	1 cut(s)	163
Hin1I	GRCGYC	1 cut(s)	108
Hin1II	CATG	3 cut(s)	217, 406, 1442
HincII	GTYRAC	3 cut(s)	238, 1372, 1421
HindII	GTYRAC	3 cut(s)	238, 1372, 1421
HindIII	AAGCTT	2 cut(s)	198, 515
HinfI	GANTC	9 cut(s)	175, 210, 314, 339, 447, 698, 824, 1127, 1354
HpaII	CCGG	2 cut(s)	14, 1484
HphI	GGTGA	1 cut(s)	1553
Hpy166II	GTNNAC	4 cut(s)	238, 1336, 1372, 1421
Hpy188I	TCNGA	5 cut(s)	703, 823, 837, 889, 1262
Hpy8I	GTNNAC	4 cut(s)	238, 1336, 1372, 1421
Hpy99I	CGWCG	1 cut(s)	110
HpyAV	CCTTC	2 cut(s)	181, 280
HpyCH4III	ACNGT	6 cut(s)	330, 652, 1057, 1316, 1418, 1425
HpyCH4IV	ACGT	1 cut(s)	108
HpyCH4V	TGCA	5 cut(s)	739, 757, 1032, 1205, 1328
HpyF10VI	GCNNNNNNNGC	2 cut(s)	41, 1453
HpyF3I	CTNAG	5 cut(s)	964, 1146, 1180, 1448, 1473
HpySE526I	ACGT	1 cut(s)	108
Hsp92I	GRCGYC	1 cut(s)	108
Hsp92II	CATG	3 cut(s)	217, 406, 1442
Ksp22I	TGATCA	1 cut(s)	141
Kzo9I	GATC	8 cut(s)	69, 141, 372, 781, 818, 884, 1067, 1235
LmnI	GCTCC	3 cut(s)	264, 562, 1383
Lsp1109I	GCAGC	2 cut(s)	456, 1188
LweI	GCATC	5 cut(s)	396, 744, 977, 1132, 1174
MaeI	CTAG	3 cut(s)	26, 1457, 1478
MaeII	ACGT	1 cut(s)	108
MaeIII	GTNAC	5 cut(s)	874, 959, 1220, 1429, 1559
MalI	GATC	8 cut(s)	71, 143, 374, 783, 820, 886, 1069, 1237
MboI	GATC	8 cut(s)	69, 141, 372, 781, 818, 884, 1067, 1235
MfeI	CAATTG	1 cut(s)	1206
MflI	RGATCY	3 cut(s)	781, 884, 1235
MhlI	GDGCHC	5 cut(s)	234, 248, 269, 552, 989
MlyI	GAGTC	3 cut(s)	219, 333, 441
MmeI	TCCRAC	3 cut(s)	312, 460, 1042
MnlI	CCTC	8 cut(s)	363, 534, 557, 604, 809, 1084, 1283, 1393
MroXI	GAANNNNTTC	2 cut(s)	828, 1158
MseI	TTAA	4 cut(s)	90, 203, 321, 920
MslI	CAYNNNNRTG	1 cut(s)	1280
MspA1I	CMGCKG	1 cut(s)	469
MspI	CCGG	2 cut(s)	14, 1484
MspR9I	CCNGG	5 cut(s)	118, 292, 561, 1232, 1484
MunI	CAATTG	1 cut(s)	1206
Mva1269I	GAATGC	1 cut(s)	35
MvaI	CCWGG	4 cut(s)	118, 292, 561, 1232
MvnI	CGCG	2 cut(s)	259, 383
MwoI	GCNNNNNNNGC	2 cut(s)	41, 1453
NciI	CCSGG	1 cut(s)	1484
NdeI	CATATG	1 cut(s)	741
NdeII	GATC	8 cut(s)	69, 141, 372, 781, 818, 884, 1067, 1235
NheI	GCTAGC	1 cut(s)	1456
NlaIII	CATG	3 cut(s)	217, 406, 1442
NlaIV	GGNNCC	3 cut(s)	12, 135, 266
NmuCI	GTSAC	3 cut(s)	959, 1429, 1559
NspV	TTCGAA	1 cut(s)	39
PctI	GAATGC	1 cut(s)	35
PdmI	GAANNNNTTC	2 cut(s)	828, 1158
PfeI	GAWTC	6 cut(s)	175, 314, 698, 824, 1127, 1354
PflMI	CCANNNNNTGG	2 cut(s)	902, 1542
PfoI	TCCNGGA	1 cut(s)	559
PkrI	GCNGC	2 cut(s)	471, 1178
PleI	GAGTC	3 cut(s)	218, 333, 441
PpsI	GAGTC	3 cut(s)	218, 333, 441
Psp124BI	GAGCTC	1 cut(s)	234
Psp6I	CCWGG	4 cut(s)	116, 290, 559, 1230
PspGI	CCWGG	4 cut(s)	116, 290, 559, 1230
PspN4I	GGNNCC	3 cut(s)	12, 135, 266
PspPI	GGNCC	2 cut(s)	796, 1228
PsuI	RGATCY	3 cut(s)	781, 884, 1235
RsaI	GTAC	2 cut(s)	281, 287
RsaNI	GTAC	2 cut(s)	280, 286
RseI	CAYNNNNRTG	1 cut(s)	1280
SacI	GAGCTC	1 cut(s)	234
SaqAI	TTAA	4 cut(s)	90, 203, 321, 920
SatI	GCNGC	2 cut(s)	470, 1177
Sau3AI	GATC	8 cut(s)	69, 141, 372, 781, 818, 884, 1067, 1235
Sau96I	GGNCC	2 cut(s)	796, 1228
SchI	GAGTC	3 cut(s)	219, 333, 441
ScrFI	CCNGG	5 cut(s)	118, 292, 561, 1232, 1484
SduI	GDGCHC	5 cut(s)	234, 248, 269, 552, 989
SfaNI	GCATC	5 cut(s)	396, 744, 977, 1132, 1174
SfcI	CTRYAG	1 cut(s)	1086
SfuI	TTCGAA	1 cut(s)	39
SinI	GGWCC	2 cut(s)	796, 1228
SmiMI	CAYNNNNRTG	1 cut(s)	1280
SmlI	CTYRAG	2 cut(s)	341, 1009
SmoI	CTYRAG	2 cut(s)	341, 1009
SsiI	CCGC	5 cut(s)	383, 423, 467, 524, 1381
SspI	AATATT	1 cut(s)	637
SspMI	CTAG	3 cut(s)	26, 1457, 1478
SstI	GAGCTC	1 cut(s)	234
StyD4I	CCNGG	5 cut(s)	116, 290, 559, 1230, 1482
TaaI	ACNGT	6 cut(s)	330, 652, 1057, 1316, 1418, 1425
TaiI	ACGT	1 cut(s)	111
TaqI	TCGA	6 cut(s)	39, 123, 375, 450, 539, 801
TatI	WGTACW	1 cut(s)	279
TfiI	GAWTC	6 cut(s)	175, 314, 698, 824, 1127, 1354
Tru1I	TTAA	4 cut(s)	90, 203, 321, 920
Tru9I	TTAA	4 cut(s)	90, 203, 321, 920
TscAI	CASTG	4 cut(s)	144, 559, 1062, 1321
TseFI	GTSAC	3 cut(s)	959, 1429, 1559
TseI	GCWGC	2 cut(s)	469, 1176
Tsp45I	GTSAC	3 cut(s)	959, 1429, 1559
TspDTI	ATGAA	7 cut(s)	73, 188, 386, 634, 900, 1406, 1520
TspGWI	ACGGA	2 cut(s)	1050, 1166
TspRI	CASTG	4 cut(s)	144, 559, 1062, 1321
Van91I	CCANNNNNTGG	2 cut(s)	902, 1542
VpaK11BI	GGWCC	2 cut(s)	796, 1228
XapI	RAATTY	3 cut(s)	79, 890, 898
XbaI	TCTAGA	1 cut(s)	25
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1354
XmiI	GTMKAC	1 cut(s)	1335
XmnI	GAANNNNTTC	2 cut(s)	828, 1158
XspI	CTAG	3 cut(s)	26, 1457, 1478
ZraI	GACGTC	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.