FvH4_3g28270

Nuclear cap-binding protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0007238
Physical Location & Seq
Forward (+)
21250245 .. 21263079
12835 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g28270.t2

Sequence Viewer

Length: 2595 bp
ATGAGTGTTTGGAAGGGCCTTCTTCTTCGAATTGGTGAAGCTTCCCCAGACTATGGCACCTCCTCCGACTTCAAAGAACACATTGAGACTTGCTTCGGCGTCCTCCGCCGAGAATTAGAACACTCCGCCCACGACGTTTTGCAGTTCCTTGTCCAGTGTGCTGAACAGTTGCCTCACAAGATTCCCCTATACAGTACCGTGATTGGCTTGTTAAACTTGGAGAATGAGGATTTTATCAGGAAAGTTGTGGAGAAGACGCACAATAATTTTCAGGATGCCTTGGATACTGGAAATTGCAACAAGATTCGTATTTTGATGAGGTTCCTGACTGCTATGATGTGCAGTAAAGTTCTCCATCCCAGTTCTCTTGTGATTGTCTTTGAAACATTATTATCATCAGCCGCAACAACAGTTGATGAGGATAAAGGAAATCCATCCTGGCAATCACGAGCTGACTTTTACATAACATGCATTTTATCCTGTCTCCCTTGGGGAGGAGCAGAACTGATTGAGCAAGTCCCGGGGGAAATTGAAAGAGTTATGGTTGGTGTAGAAGCTTATTTGAGCATAAGAAAGCATGTTAGTGACACTGGGTTGTCTTTTTTTGAGGATGATGATGACAGTGCAAAAGTCTCTGCTGATAAGGATTTTTTGGAAGATTTGTGGGGCCGAATACAAGTTCTATCAAGTAATGGATGGAAACTTGACAGTGTTCCAAGACCTCACTTGTCATTTGAAGCACAACTAGTCAATGGAAAGTCTCATGAGTTTGGCCCCATCAGCTGTCCTGACCAACCTGAACTACCTTCAGCAGTTTCCAATATTACTTATGGTAAACAAAAGCATGATGCAGAGTCAATTTATCCTCAACGGATCCGAAGGCTGAATATATTTCCTTCAAATAAAACTGAGGATATGGAACCCATGGATCGCTTCATTGTGGAAGAGTATCTACTAGATGTTCTTTTTTTCTTAAATGGCTGTCGAAAGGAATGTGCTTCATACATGGCTGGCCTACCTGTACCCTTTAGATATGAGTATCTTATGGCGGAGACAATTTTCTCTCAGTTACTTCTGCTACCACAACCCCCTTTCAGGCCAACATATTACACTCTGGTTATTATGGACCTCTGTAAGGCTCTTCCTGGAGCCTTTCCGGGAGTGGTTGCTGGTGCTGTAAGGGCTCTTTTCGAGAAAATAGCTGATCTTGATATGGAATGTCGAACACGGCTAATCCTTTGGTTTTCTCACCACTTATCCAACTTTCAGTTCATCTGGCCTTGGGAGGAGTGGTCTTATGTCTTGGACCTGTCAAAGTGGGCGCCACAACGTGTATTTGTTCAGGAGGTCCTGGAGAGAGAAGTTCGTTTGTCCTACTGGGAAAAAGTGAAGCAGAGTATTGAGAGTGCTCCTGGTCTAGAACAGTTGCTTCCTCCAAAAGGGACACCAAACTTCAAGTTCAGTGTTGAAGAAAGCATGGAAGGAAATGAACAACATGCACTTTCTGCTGAACTCAGAAACCTGGTAAAAGGAAGGGCATCTGCCCGTGAAGTAATCTTATGGATAGAGGAAAGTCTGTTTCCTGTCCATGGTATGGAAGTTACCCTCTCTGTGGTTGCGCAAACTCTCCTCGACATTGGATCTAAAAGTTTCACTCATTTGATTACTGTATTGGAGAGATACGGCCAAGTCATTGCAAAACTATGTGCTGACCAGGATAAGCAGGTCATGTTGATCACCGAGATTGATTCTTACTGGAAGAACAATGCTCAAATGACCGCTCTTGCAATAGATAGGATGATGGGGTACCGACTTCTATCTAATTTGGCCATTGTCAGATGGGTATTTTCTCCTGAAAATGTTGAGCAATTTCATTTATCAGACCGCTCATGGGAGATATTAAGAAATGCAGTTGGCAAGACATACAACCGTGTATGTGATCTGAGGAAAGAGATTTTGTCCATGAAGAAGAATATCGTATCGGCTGAAGAAGCTGCAGCAACTGCAAAAGCAGAGTTAGTGGCCGCTGAATCAAAGCTCTCACTTGTAGATGGAGAACCTGTTCTTGGTGAAAACCCGATGAGGTTGAAGCGTTTGAAATCCTATGCTGAGAAGGCAAAGGAGGAGGAGGTGTCCGTACGTGAATCTTTAGAGGCTAAGGAAGCTCTGCTTGCCCGAGCCCTTGATGAATTTGAGGCATTATTCATCTCTTTGTACAAAAACTTCCTGAATGTCTTCATGGAAAGGCTGCCAGAGGCATCAAAAGTTGCTACATTGCAGGGATTAAAATCTAGTCATGCAGATTCTATGTCAGTCGACCTCGAAGAATCATCTGCAATGGAGGTGGACAATGAGAATGGAAAATCTAAAAGTCAATTGAATGGTGCCGGGACAAGTAATACATATAATGTTGGAGAAAATGAGCAGTGGTGTCTGTCAACATTAGGCTACCTCAAAGCCTTCTCAAGGCAATATGCTTCTGAGATATGGCCTCACATGGAGAAGTTGGATGCAGAGGTTATAACAGAGAATGTGCACCCCCTTATACGAAAAGCAATTTATTGTGGTCTCCGTCGATCAACTGATGGGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000339 GO:0000375 GO:0000377 GO:0000394 GO:0000398 GO:0000956 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005845 GO:0005846 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0022414 GO:0031047 GO:0031050 GO:0031053 GO:0031503 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033993 GO:0034470 GO:0034518 GO:0034613 GO:0034641 GO:0034655 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0097159 GO:0097305 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901698 GO:1901699 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 map03013 map03015 map03040
Pfam Domains
Protein Families
MIF4G MIF4G_like MIF4G_like_2

Protein Analysis

865

Amino Acids

98.0

Weight (kDa)

5.24

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIF4G PF02854 20 - 224 7.2e-31 MIF4G domain
MIF4G_like PF09088 334 - 459 1.5e-35 MIF4G like
MIF4G_like_2 PF09090 486 - 819 2.1e-29 MIF4G like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2522
Acc16I TGCGCA 1 cut(s) 1620
Acc36I ACCTGC 1 cut(s) 1714
Acc65I GGTACC 1 cut(s) 1806
AccB1I GGYRCC 4 cut(s) 56, 1321, 1806, 2384
AccB7I CCANNNNNTGG 2 cut(s) 53, 1594
AccBSI CCGCTC 2 cut(s) 1781, 1887
AccI GTMKAC 1 cut(s) 2316
AciI CCGC 7 cut(s) 106, 126, 402, 1049, 1779, 1885, 2025
AclWI GGATC 4 cut(s) 868, 881, 936, 1648
AcoI YGGCCR 3 cut(s) 1684, 1827, 2022
AcsI RAATTY 1 cut(s) 2189
AcuI CTGAAG 2 cut(s) 792, 2007
AcyI GRCGYC 2 cut(s) 99, 1322
AdeI CACNNNGTG 1 cut(s) 1331
AfaI GTAC 5 cut(s) 196, 1023, 1808, 2139, 2216
AflIII ACRYGT 1 cut(s) 1330
AhlI ACTAGT 1 cut(s) 745
AjnI CCWGG 6 cut(s) 437, 1144, 1350, 1411, 1521, 1713
AjuI GAANNNNNNNTTGG 4 cut(s) 1253, 1285, 2049, 2081
AloI GAACNNNNNNTCC 2 cut(s) 2046, 2078
AluBI AGCT 8 cut(s) 41, 452, 557, 783, 1202, 1994, 2038, 2165
AluI AGCT 8 cut(s) 41, 452, 557, 783, 1202, 1994, 2038, 2165
Alw21I GWGCWC 2 cut(s) 1411, 2538
Alw26I GTCTC 6 cut(s) 80, 488, 637, 765, 1046, 2573
Alw44I GTGCAC 1 cut(s) 2534
AlwI GGATC 4 cut(s) 868, 881, 936, 1648
AlwNI CAGNNNCTG 1 cut(s) 2003
Ama87I CYCGRG 2 cut(s) 520, 2175
ApaLI GTGCAC 1 cut(s) 2534
ApeKI GCWGC 3 cut(s) 1994, 1997, 2248
ApoI RAATTY 1 cut(s) 2189
Asp700I GAANNNNTTC 2 cut(s) 2061, 2234
Asp718I GGTACC 1 cut(s) 1806
AspLEI GCGC 2 cut(s) 1324, 1621
AspS9I GGNCC 6 cut(s) 16, 667, 773, 1126, 1306, 1348
AsuC2I CCSGG 4 cut(s) 521, 522, 1158, 2389
AsuHPI GGTGA 4 cut(s) 47, 1241, 1729, 2081
AsuII TTCGAA 1 cut(s) 28
AvaI CYCGRG 2 cut(s) 520, 2175
AvaII GGWCC 3 cut(s) 1126, 1306, 1348
BaeGI GKGCMC 1 cut(s) 2538
BalI TGGCCA 1 cut(s) 1829
BamHI GGATCC 1 cut(s) 873
BanI GGYRCC 4 cut(s) 56, 1321, 1806, 2384
BanII GRGCYC 2 cut(s) 1186, 2182
BarI GAAGNNNNNNTAC 4 cut(s) 936, 968, 2207, 2239
BauI CACGAG 1 cut(s) 447
BbsI GAAGAC 2 cut(s) 260, 2227
Bbv12I GWGCWC 2 cut(s) 1411, 2538
BbvI GCAGC 3 cut(s) 1981, 2009, 2235
BccI CCATC 8 cut(s) 363, 442, 690, 785, 1795, 1833, 2045, 2579
BceAI ACGGC 2 cut(s) 1244, 1699
BciT130I CCWGG 6 cut(s) 439, 1146, 1352, 1413, 1523, 1715
BciVI GTATCC 1 cut(s) 277
BclI TGATCA 1 cut(s) 1734
BcnI CCSGG 4 cut(s) 521, 522, 1158, 2389
BcoDI GTCTC 6 cut(s) 80, 488, 637, 765, 1046, 2573
BcuI ACTAGT 1 cut(s) 745
BfaI CTAG 4 cut(s) 746, 956, 1418, 2292
BfmI CTRYAG 1 cut(s) 1995
BfoI RGCGCY 1 cut(s) 1325
BfuAI ACCTGC 1 cut(s) 1714
BfuI GTATCC 1 cut(s) 277
BisI GCNGC 5 cut(s) 402, 1995, 1998, 2025, 2249
BlsI GCNGC 5 cut(s) 403, 1996, 1999, 2026, 2250
Bme18I GGWCC 3 cut(s) 1126, 1306, 1348
BmeT110I CYCGRG 2 cut(s) 520, 2175
BmgT120I GGNCC 6 cut(s) 16, 667, 773, 1126, 1306, 1348
BmrI ACTGGG 3 cut(s) 354, 600, 1387
BmsI GCATC 5 cut(s) 265, 838, 1547, 2267, 2500
BmuI ACTGGG 3 cut(s) 354, 600, 1387
BpiI GAAGAC 2 cut(s) 260, 2227
BpmI CTGGAG 2 cut(s) 1167, 1373
Bpu10I CCTNAGC 1 cut(s) 2157
Bpu14I TTCGAA 1 cut(s) 28
BpuEI CTTGAG 1 cut(s) 2449
BpuMI CCSGG 4 cut(s) 521, 522, 1158, 2389
BsaAI YACGTR 1 cut(s) 2141
BsaBI GATNNNNATC 1 cut(s) 2287
BsaHI GRCGYC 2 cut(s) 99, 1322
BsaI GGTCTC 1 cut(s) 2573
BsaJI CCNNGG 7 cut(s) 279, 488, 520, 521, 924, 1280, 1588
BsaXI ACNNNNNCTCC 6 cut(s) 1277, 1307, 2046, 2076, 2117, 2147
Bse1I ACTGG 6 cut(s) 154, 292, 360, 595, 1382, 1760
Bse3DI GCAATG 3 cut(s) 1692, 2273, 2343
Bse8I GATNNNNATC 1 cut(s) 2287
BseBI CCWGG 6 cut(s) 439, 1146, 1352, 1413, 1523, 1715
BseDI CCNNGG 7 cut(s) 279, 488, 520, 521, 924, 1280, 1588
BseGI GGATG 7 cut(s) 280, 355, 434, 616, 701, 1803, 2515
BseJI GATNNNNATC 1 cut(s) 2287
BseMI GCAATG 3 cut(s) 1692, 2273, 2343
BseMII CTCAG 6 cut(s) 900, 1079, 1528, 1934, 2100, 2472
BseNI ACTGG 6 cut(s) 154, 292, 360, 595, 1382, 1760
BseRI GAGGAG 6 cut(s) 52, 510, 1301, 1619, 2138, 2141
BseSI GKGCMC 1 cut(s) 2538
BseXI GCAGC 3 cut(s) 1981, 2009, 2235
BsgI GTGCAG 1 cut(s) 361
BshNI GGYRCC 4 cut(s) 56, 1321, 1806, 2384
BsiHKAI GWGCWC 2 cut(s) 1411, 2538
BsiHKCI CYCGRG 2 cut(s) 520, 2175
BsiSI CCGG 3 cut(s) 521, 1157, 2388
BsiWI CGTACG 1 cut(s) 2137
BslFI GGGAC 3 cut(s) 503, 1456, 2404
BsmAI GTCTC 6 cut(s) 80, 488, 637, 765, 1046, 2573
BsmFI GGGAC 3 cut(s) 503, 1456, 2404
Bso31I GGTCTC 1 cut(s) 2573
BsoBI CYCGRG 2 cut(s) 520, 2175
Bsp119I TTCGAA 1 cut(s) 28
Bsp1286I GDGCHC 4 cut(s) 1186, 1411, 2182, 2538
Bsp1407I TGTACA 1 cut(s) 2214
Bsp143I GATC 7 cut(s) 873, 928, 1204, 1640, 1734, 1939, 2576
Bsp19I CCATGG 2 cut(s) 924, 1588
BspACI CCGC 7 cut(s) 106, 126, 402, 1049, 1779, 1885, 2025
BspCNI CTCAG 6 cut(s) 901, 1078, 1527, 1935, 2101, 2473
BspHI TCATGA 1 cut(s) 763
BspMAI CTGCAG 1 cut(s) 1999
BspMI ACCTGC 1 cut(s) 1714
BspPI GGATC 4 cut(s) 868, 881, 936, 1648
BspQI GCTCTTC 1 cut(s) 1146
BspT104I TTCGAA 1 cut(s) 28
BspT107I GGYRCC 4 cut(s) 56, 1321, 1806, 2384
BspTNI GGTCTC 1 cut(s) 2573
BsrBI CCGCTC 2 cut(s) 1781, 1887
BsrDI GCAATG 3 cut(s) 1692, 2273, 2343
BsrGI TGTACA 1 cut(s) 2214
BsrI ACTGG 6 cut(s) 154, 292, 360, 595, 1382, 1760
BssECI CCNNGG 7 cut(s) 279, 488, 520, 521, 924, 1280, 1588
BssMI GATC 7 cut(s) 873, 928, 1204, 1640, 1734, 1939, 2576
BssNI GRCGYC 2 cut(s) 99, 1322
BssSI CACGAG 1 cut(s) 447
BssT1I CCWWGG 5 cut(s) 279, 488, 924, 1280, 1588
Bst2BI CACGAG 1 cut(s) 447
Bst2UI CCWGG 6 cut(s) 439, 1146, 1352, 1413, 1523, 1715
Bst4CI ACNGT 9 cut(s) 168, 194, 199, 412, 623, 710, 1425, 1669, 1931
Bst6I CTCTTC 2 cut(s) 939, 1146
BstACI GRCGYC 2 cut(s) 99, 1322
BstAPI GCANNNNNTGC 2 cut(s) 1505, 2003
BstAUI TGTACA 1 cut(s) 2214
BstBAI YACGTR 1 cut(s) 2141
BstBI TTCGAA 1 cut(s) 28
BstC8I GCNNGC 2 cut(s) 1012, 2172
BstDEI CTNAG 7 cut(s) 909, 1065, 1514, 1943, 2109, 2157, 2481
BstDSI CCRYGG 2 cut(s) 924, 1588
BstENI CCTNNNNNAGG 4 cut(s) 492, 1133, 1437, 2464
BstF5I GGATG 7 cut(s) 280, 355, 434, 616, 701, 1803, 2515
BstH2I RGCGCY 1 cut(s) 1325
BstHHI GCGC 2 cut(s) 1324, 1621
BstKTI GATC 7 cut(s) 876, 931, 1207, 1643, 1737, 1942, 2579
BstMAI GTCTC 6 cut(s) 80, 488, 637, 765, 1046, 2573
BstMBI GATC 7 cut(s) 873, 928, 1204, 1640, 1734, 1939, 2576
BstMWI GCNNNNNNNGC 9 cut(s) 105, 780, 1181, 1505, 1991, 2003, 2114, 2162, 2171
BstNI CCWGG 6 cut(s) 439, 1146, 1352, 1413, 1523, 1715
BstNSI RCATGY 3 cut(s) 471, 581, 1499
BstSFI CTRYAG 1 cut(s) 1995
BstSLI GKGCMC 1 cut(s) 2538
BstV1I GCAGC 3 cut(s) 1981, 2009, 2235
BstV2I GAAGAC 2 cut(s) 260, 2227
BstX2I RGATCY 2 cut(s) 873, 1640
BstYI RGATCY 2 cut(s) 873, 1640
BsuI GTATCC 1 cut(s) 277
BtgI CCRYGG 2 cut(s) 924, 1588
BtsCI GGATG 7 cut(s) 280, 355, 434, 616, 701, 1803, 2515
BtsI GCAGTG 1 cut(s) 2432
BtsIMutI CAGTG 6 cut(s) 161, 588, 628, 715, 1468, 2432
BveI ACCTGC 1 cut(s) 1714
Cac8I GCNNGC 2 cut(s) 1012, 2172
CaiI CAGNNNCTG 1 cut(s) 2003
CciI TCATGA 1 cut(s) 763
CfoI GCGC 2 cut(s) 1324, 1621
Cfr13I GGNCC 6 cut(s) 16, 667, 773, 1126, 1306, 1348
Cfr9I CCCGGG 1 cut(s) 520
CseI GACGC 2 cut(s) 88, 265
CsiI ACCWGGT 1 cut(s) 1521
Csp6I GTAC 5 cut(s) 195, 1022, 1807, 2138, 2215
CspCI CAANNNNNGTGG 2 cut(s) 2325, 2360
CviQI GTAC 5 cut(s) 195, 1022, 1807, 2138, 2215
DdeI CTNAG 7 cut(s) 909, 1065, 1514, 1943, 2109, 2157, 2481
DinI GGCGCC 1 cut(s) 1323
DpnI GATC 7 cut(s) 875, 930, 1206, 1642, 1736, 1941, 2578
DpnII GATC 7 cut(s) 873, 928, 1204, 1640, 1734, 1939, 2576
DraIII CACNNNGTG 1 cut(s) 1331
EaeI YGGCCR 3 cut(s) 1684, 1827, 2022
Eam1104I CTCTTC 2 cut(s) 939, 1146
EarI CTCTTC 2 cut(s) 939, 1146
EciI GGCGGA 3 cut(s) 95, 115, 1064
Eco130I CCWWGG 5 cut(s) 279, 488, 924, 1280, 1588
Eco24I GRGCYC 2 cut(s) 1186, 2182
Eco31I GGTCTC 1 cut(s) 2573
Eco47I GGWCC 3 cut(s) 1126, 1306, 1348
Eco57I CTGAAG 2 cut(s) 792, 2007
Eco88I CYCGRG 2 cut(s) 520, 2175
EcoNI CCTNNNNNAGG 4 cut(s) 492, 1133, 1437, 2464
EcoO109I RGGNCCY 2 cut(s) 16, 1348
EcoRII CCWGG 6 cut(s) 437, 1144, 1350, 1411, 1521, 1713
EcoT14I CCWWGG 5 cut(s) 279, 488, 924, 1280, 1588
EcoT22I ATGCAT 1 cut(s) 473
EcoT38I GRGCYC 2 cut(s) 1186, 2182
EgeI GGCGCC 1 cut(s) 1323
EheI GGCGCC 1 cut(s) 1323
ErhI CCWWGG 5 cut(s) 279, 488, 924, 1280, 1588
FalI AAGNNNNNCTT 2 cut(s) 2154, 2186
FaqI GGGAC 3 cut(s) 503, 1456, 2404
FbaI TGATCA 1 cut(s) 1734
FblI GTMKAC 1 cut(s) 2316
Fnu4HI GCNGC 5 cut(s) 402, 1995, 1998, 2025, 2249
FokI GGATG 7 cut(s) 287, 342, 421, 623, 708, 1810, 2522
FriOI GRGCYC 2 cut(s) 1186, 2182
Fsp4HI GCNGC 5 cut(s) 402, 1995, 1998, 2025, 2249
FspBI CTAG 4 cut(s) 746, 956, 1418, 2292
FspI TGCGCA 1 cut(s) 1620
GlaI GCGC 2 cut(s) 1323, 1620
GluI GCNGC 5 cut(s) 402, 1995, 1998, 2025, 2249
GsuI CTGGAG 2 cut(s) 1167, 1373
HaeII RGCGCY 1 cut(s) 1325
HapII CCGG 3 cut(s) 521, 1157, 2388
HgaI GACGC 2 cut(s) 88, 265
HhaI GCGC 2 cut(s) 1324, 1621
Hin1I GRCGYC 2 cut(s) 99, 1322
Hin6I GCGC 2 cut(s) 1322, 1619
HinP1I GCGC 2 cut(s) 1322, 1619
HincII GTYRAC 2 cut(s) 2317, 2439
HindII GTYRAC 2 cut(s) 2317, 2439
HindIII AAGCTT 2 cut(s) 39, 555
HinfI GANTC 8 cut(s) 181, 304, 854, 1748, 2030, 2144, 2303, 2327
HpaII CCGG 3 cut(s) 521, 1157, 2388
HphI GGTGA 4 cut(s) 47, 1241, 1729, 2081
Hpy166II GTNNAC 5 cut(s) 836, 2317, 2347, 2439, 2536
Hpy188I TCNGA 7 cut(s) 67, 878, 1517, 1838, 1882, 1944, 2482
Hpy8I GTNNAC 5 cut(s) 836, 2317, 2347, 2439, 2536
Hpy99I CGWCG 2 cut(s) 137, 2577
HpyAV CCTTC 9 cut(s) 7, 29, 816, 873, 906, 1475, 1527, 2107, 2470
HpyCH4III ACNGT 9 cut(s) 168, 194, 199, 412, 623, 710, 1425, 1669, 1931
HpyCH4IV ACGT 3 cut(s) 135, 1330, 2140
HpyF10VI GCNNNNNNNGC 9 cut(s) 105, 780, 1181, 1505, 1991, 2003, 2114, 2162, 2171
HpyF3I CTNAG 7 cut(s) 909, 1065, 1514, 1943, 2109, 2157, 2481
HpySE526I ACGT 3 cut(s) 135, 1330, 2140
Hsp92I GRCGYC 2 cut(s) 99, 1322
HspAI GCGC 2 cut(s) 1322, 1619
KasI GGCGCC 1 cut(s) 1321
KpnI GGTACC 1 cut(s) 1810
Ksp22I TGATCA 1 cut(s) 1734
Kzo9I GATC 7 cut(s) 873, 928, 1204, 1640, 1734, 1939, 2576
LguI GCTCTTC 1 cut(s) 1146
LmnI GCTCC 3 cut(s) 497, 1148, 1414
Lsp1109I GCAGC 3 cut(s) 1981, 2009, 2235
LweI GCATC 5 cut(s) 265, 838, 1547, 2267, 2500
MabI ACCWGGT 1 cut(s) 1521
MaeI CTAG 4 cut(s) 746, 956, 1418, 2292
MaeII ACGT 3 cut(s) 135, 1330, 2140
MaeIII GTNAC 3 cut(s) 584, 1068, 1600
MalI GATC 7 cut(s) 875, 930, 1206, 1642, 1736, 1941, 2578
MbiI CCGCTC 2 cut(s) 1781, 1887
MboI GATC 7 cut(s) 873, 928, 1204, 1640, 1734, 1939, 2576
MfeI CAATTG 1 cut(s) 2375
MflI RGATCY 2 cut(s) 873, 1640
MhlI GDGCHC 4 cut(s) 1186, 1411, 2182, 2538
MlsI TGGCCA 1 cut(s) 1829
MluNI TGGCCA 1 cut(s) 1829
Mly113I GGCGCC 1 cut(s) 1322
MlyI GAGTC 1 cut(s) 863
MmeI TCCRAC 4 cut(s) 90, 1284, 2392, 2487
Mox20I TGGCCA 1 cut(s) 1829
Mph1103I ATGCAT 1 cut(s) 473
MroXI GAANNNNTTC 2 cut(s) 2061, 2234
MscI TGGCCA 1 cut(s) 1829
MseI TTAA 4 cut(s) 212, 974, 1901, 2285
MslI CAYNNNNRTG 1 cut(s) 582
Msp20I TGGCCA 1 cut(s) 1829
MspA1I CMGCKG 2 cut(s) 783, 2027
MspI CCGG 3 cut(s) 521, 1157, 2388
MunI CAATTG 1 cut(s) 2375
MvaI CCWGG 6 cut(s) 439, 1146, 1352, 1413, 1523, 1715
MwoI GCNNNNNNNGC 9 cut(s) 105, 780, 1181, 1505, 1991, 2003, 2114, 2162, 2171
NarI GGCGCC 1 cut(s) 1322
NciI CCSGG 4 cut(s) 521, 522, 1158, 2389
NcoI CCATGG 2 cut(s) 924, 1588
NdeII GATC 7 cut(s) 873, 928, 1204, 1640, 1734, 1939, 2576
NmeAIII GCCGAG 1 cut(s) 134
NmuCI GTSAC 1 cut(s) 584
NsbI TGCGCA 1 cut(s) 1620
NsiI ATGCAT 1 cut(s) 473
NspI RCATGY 3 cut(s) 471, 581, 1499
NspV TTCGAA 1 cut(s) 28
PagI TCATGA 1 cut(s) 763
PciSI GCTCTTC 1 cut(s) 1146
PdmI GAANNNNTTC 2 cut(s) 2061, 2234
PfeI GAWTC 7 cut(s) 181, 304, 1748, 2030, 2144, 2303, 2327
Pfl23II CGTACG 1 cut(s) 2137
PflMI CCANNNNNTGG 2 cut(s) 53, 1594
PfoI TCCNGGA 3 cut(s) 1144, 1156, 1350
PkrI GCNGC 5 cut(s) 403, 1996, 1999, 2026, 2250
PleI GAGTC 1 cut(s) 862
PluTI GGCGCC 1 cut(s) 1325
PpsI GAGTC 1 cut(s) 862
Ppu21I YACGTR 1 cut(s) 2141
PpuMI RGGWCCY 1 cut(s) 1348
PsiI TTATAA 1 cut(s) 2522
Psp5II RGGWCCY 1 cut(s) 1348
Psp6I CCWGG 6 cut(s) 437, 1144, 1350, 1411, 1521, 1713
PspGI CCWGG 6 cut(s) 437, 1144, 1350, 1411, 1521, 1713
PspLI CGTACG 1 cut(s) 2137
PspPI GGNCC 6 cut(s) 16, 667, 773, 1126, 1306, 1348
PspPPI RGGWCCY 1 cut(s) 1348
PstI CTGCAG 1 cut(s) 1999
PstNI CAGNNNCTG 1 cut(s) 2003
PsuI RGATCY 2 cut(s) 873, 1640
PvuII CAGCTG 1 cut(s) 783
RsaI GTAC 5 cut(s) 196, 1023, 1808, 2139, 2216
RsaNI GTAC 5 cut(s) 195, 1022, 1807, 2138, 2215
RseI CAYNNNNRTG 1 cut(s) 582
SalI GTCGAC 1 cut(s) 2315
SapI GCTCTTC 1 cut(s) 1146
SaqAI TTAA 4 cut(s) 212, 974, 1901, 2285
SatI GCNGC 5 cut(s) 402, 1995, 1998, 2025, 2249
Sau3AI GATC 7 cut(s) 873, 928, 1204, 1640, 1734, 1939, 2576
Sau96I GGNCC 6 cut(s) 16, 667, 773, 1126, 1306, 1348
SchI GAGTC 1 cut(s) 863
SduI GDGCHC 4 cut(s) 1186, 1411, 2182, 2538
SexAI ACCWGGT 1 cut(s) 1521
SfaNI GCATC 5 cut(s) 265, 838, 1547, 2267, 2500
SfcI CTRYAG 1 cut(s) 1995
SfoI GGCGCC 1 cut(s) 1323
SfuI TTCGAA 1 cut(s) 28
SinI GGWCC 3 cut(s) 1126, 1306, 1348
SmaI CCCGGG 1 cut(s) 522
SmiMI CAYNNNNRTG 1 cut(s) 582
SmlI CTYRAG 1 cut(s) 2464
SmoI CTYRAG 1 cut(s) 2464
SpeI ACTAGT 1 cut(s) 745
SsiI CCGC 7 cut(s) 106, 126, 402, 1049, 1779, 1885, 2025
SspDI GGCGCC 1 cut(s) 1321
SspI AATATT 1 cut(s) 823
SspMI CTAG 4 cut(s) 746, 956, 1418, 2292
StyI CCWWGG 5 cut(s) 279, 488, 924, 1280, 1588
TaaI ACNGT 9 cut(s) 168, 194, 199, 412, 623, 710, 1425, 1669, 1931
TaiI ACGT 3 cut(s) 138, 1333, 2143
TaqI TCGA 8 cut(s) 28, 985, 1191, 1222, 1632, 2316, 2322, 2575
TatI WGTACW 1 cut(s) 2214
TauI GCSGC 2 cut(s) 404, 2027
TfiI GAWTC 7 cut(s) 181, 304, 1748, 2030, 2144, 2303, 2327
Tru1I TTAA 4 cut(s) 212, 974, 1901, 2285
Tru9I TTAA 4 cut(s) 212, 974, 1901, 2285
TscAI CASTG 6 cut(s) 161, 595, 628, 715, 1468, 2432
TseFI GTSAC 1 cut(s) 584
TseI GCWGC 3 cut(s) 1994, 1997, 2248
Tsp45I GTSAC 1 cut(s) 584
TspDTI ATGAA 9 cut(s) 925, 990, 1261, 1503, 1862, 1979, 2194, 2202, 2227
TspGWI ACGGA 3 cut(s) 886, 2125, 2561
TspMI CCCGGG 1 cut(s) 520
TspRI CASTG 6 cut(s) 161, 595, 628, 715, 1468, 2432
Van91I CCANNNNNTGG 2 cut(s) 53, 1594
VneI GTGCAC 1 cut(s) 2534
VpaK11BI GGWCC 3 cut(s) 1126, 1306, 1348
XagI CCTNNNNNAGG 4 cut(s) 492, 1133, 1437, 2464
XapI RAATTY 1 cut(s) 2189
XbaI TCTAGA 1 cut(s) 1417
XceI RCATGY 3 cut(s) 471, 581, 1499
XmaI CCCGGG 1 cut(s) 520
XmiI GTMKAC 1 cut(s) 2316
XmnI GAANNNNTTC 2 cut(s) 2061, 2234
XspI CTAG 4 cut(s) 746, 956, 1418, 2292
Zsp2I ATGCAT 1 cut(s) 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.