Nuclear cap-binding protein subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G13540 |
| fragaria_vesca | FvH4_3g28270 FvH4_3g28270 FvH4_3g28270 FvH4_3g28270 FvH4_3g28270 |
| malus_domestica | MD03G1169700.v1.1 MD11G1186900.v1.1 |
| prunus_persica | Prupe.4G257300_v2.0.a1 Prupe.4G257300_v2.0.a1 Prupe.4G257300_v2.0.a1 |
| pyrus_communis | pycom03g12610 pycom11g16380 |
| rosa_chinensis | RchiOBHm_Chr5g0051141 |
| rosa_laevigata | RLG00000034757 |
| rosa_multiflora | Rmu_sc0000446.1_g000015 Rmu_sc0009955.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00029400 |
| rosa_rugosa | Rorug05G0266000 |
| rosa_samantha | Rh5AG338100 Rh5BG348200 Rh5CG375300 Rh5DG361100 |
| rosa_wichuraiana | Rw0G023640 Rw5G031950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1326, 1723 |
| Acc65I | GGTACC | 1 cut(s) | 1815 |
| AccB1I | GGYRCC | 3 cut(s) | 65, 1815, 2393 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 62, 1603 |
| AccBSI | CCGCTC | 1 cut(s) | 1896 |
| AccI | GTMKAC | 3 cut(s) | 2325, 2447, 2578 |
| AciI | CCGC | 8 cut(s) | 135, 411, 860, 880, 1097, 1334, 1894, 2034 |
| AclWI | GGATC | 4 cut(s) | 877, 890, 945, 1657 |
| AcoI | YGGCCR | 2 cut(s) | 1836, 2031 |
| AcsI | RAATTY | 1 cut(s) | 2198 |
| AcuI | CTGAAG | 1 cut(s) | 2016 |
| AcvI | CACGTG | 1 cut(s) | 2150 |
| AfaI | GTAC | 4 cut(s) | 205, 1188, 1817, 2225 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 62, 503, 1144, 1448, 1598, 1603, 1900, 2075 |
| AflII | CTTAAG | 1 cut(s) | 1909 |
| AflIII | ACRYGT | 1 cut(s) | 1339 |
| AjnI | CCWGG | 6 cut(s) | 446, 1153, 1165, 1420, 1722, 2396 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 87, 119, 1262, 1294, 2058, 2090 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2055, 2087 |
| AluBI | AGCT | 8 cut(s) | 461, 566, 754, 792, 1211, 1994, 2047, 2232 |
| AluI | AGCT | 8 cut(s) | 461, 566, 754, 792, 1211, 1994, 2047, 2232 |
| Alw21I | GWGCWC | 1 cut(s) | 1420 |
| Alw26I | GTCTC | 4 cut(s) | 497, 646, 774, 1055 |
| AlwI | GGATC | 4 cut(s) | 877, 890, 945, 1657 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2012, 2315 |
| Ama87I | CYCGRG | 2 cut(s) | 1361, 2184 |
| AoxI | GGCC | 8 cut(s) | 781, 1021, 1106, 1286, 1329, 1836, 2031, 2498 |
| ApaI | GGGCCC | 1 cut(s) | 1333 |
| ApeKI | GCWGC | 4 cut(s) | 1514, 2003, 2006, 2257 |
| ApoI | RAATTY | 1 cut(s) | 2198 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2070 |
| Asp718I | GGTACC | 1 cut(s) | 1815 |
| AspS9I | GGNCC | 6 cut(s) | 676, 782, 1135, 1329, 1330, 1357 |
| AsuHPI | GGTGA | 1 cut(s) | 1250 |
| AsuII | TTCGAA | 1 cut(s) | 37 |
| AvaI | CYCGRG | 2 cut(s) | 1361, 2184 |
| AvaII | GGWCC | 3 cut(s) | 676, 1135, 1357 |
| AxyI | CCTNAGG | 2 cut(s) | 531, 1952 |
| BaeGI | GKGCMC | 2 cut(s) | 1035, 1333 |
| BalI | TGGCCA | 1 cut(s) | 1838 |
| BamHI | GGATCC | 1 cut(s) | 882 |
| BanI | GGYRCC | 3 cut(s) | 65, 1815, 2393 |
| BanII | GRGCYC | 3 cut(s) | 1195, 1333, 2191 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2216, 2248 |
| BauI | CACGAG | 1 cut(s) | 456 |
| BbrPI | CACGTG | 1 cut(s) | 2150 |
| BbsI | GAAGAC | 2 cut(s) | 20, 672 |
| Bbv12I | GWGCWC | 1 cut(s) | 1420 |
| BbvCI | CCTCAGC | 2 cut(s) | 876, 2523 |
| BbvI | GCAGC | 4 cut(s) | 1501, 1990, 2018, 2244 |
| BccI | CCATC | 9 cut(s) | 372, 451, 699, 794, 1804, 1842, 2054, 2242, 2588 |
| BceAI | ACGGC | 2 cut(s) | 1253, 2270 |
| BciT130I | CCWGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| BcoDI | GTCTC | 4 cut(s) | 497, 646, 774, 1055 |
| BfaI | CTAG | 3 cut(s) | 755, 965, 1427 |
| BfmI | CTRYAG | 1 cut(s) | 2004 |
| BfrI | CTTAAG | 1 cut(s) | 1909 |
| BfuAI | ACCTGC | 2 cut(s) | 1326, 1723 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1105, 2123 |
| BglII | AGATCT | 1 cut(s) | 1905 |
| BisI | GCNGC | 6 cut(s) | 411, 1515, 2004, 2007, 2034, 2258 |
| BlsI | GCNGC | 6 cut(s) | 412, 1516, 2005, 2008, 2035, 2259 |
| Bme1390I | CCNGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| Bme18I | GGWCC | 3 cut(s) | 676, 1135, 1357 |
| BmeT110I | CYCGRG | 2 cut(s) | 1361, 2184 |
| BmgT120I | GGNCC | 6 cut(s) | 676, 782, 1135, 1329, 1330, 1357 |
| BmrFI | CCNGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| BmrI | ACTGGG | 3 cut(s) | 363, 609, 1396 |
| BmsI | GCATC | 7 cut(s) | 274, 847, 1556, 1990, 2276, 2495, 2509 |
| BmuI | ACTGGG | 3 cut(s) | 363, 609, 1396 |
| BpiI | GAAGAC | 2 cut(s) | 20, 672 |
| BpmI | CTGGAG | 2 cut(s) | 1176, 1845 |
| Bpu10I | CCTNAGC | 3 cut(s) | 876, 2166, 2523 |
| Bpu14I | TTCGAA | 1 cut(s) | 37 |
| BpuEI | CTTGAG | 1 cut(s) | 2458 |
| BsaAI | YACGTR | 1 cut(s) | 2150 |
| BsaJI | CCNNGG | 5 cut(s) | 497, 933, 1289, 1446, 1597 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2055, 2085, 2126, 2156 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 62, 503, 1144, 1448, 1598, 1603, 1900, 2075 |
| Bse1I | ACTGG | 7 cut(s) | 163, 301, 369, 604, 1128, 1391, 1769 |
| Bse21I | CCTNAGG | 2 cut(s) | 531, 1952 |
| Bse3DI | GCAATG | 3 cut(s) | 1701, 2282, 2352 |
| BseBI | CCWGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| BseDI | CCNNGG | 5 cut(s) | 497, 933, 1289, 1446, 1597 |
| BseGI | GGATG | 9 cut(s) | 289, 364, 443, 710, 1812, 2065, 2267, 2524, 2545 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 62, 503, 1144, 1448, 1598, 1603, 1900, 2075 |
| BseMI | GCAATG | 3 cut(s) | 1701, 2282, 2352 |
| BseMII | CTCAG | 9 cut(s) | 522, 890, 909, 1088, 1537, 1740, 1943, 2481, 2514 |
| BseNI | ACTGG | 7 cut(s) | 163, 301, 369, 604, 1128, 1391, 1769 |
| BseRI | GAGGAG | 7 cut(s) | 61, 443, 519, 1310, 1628, 2147, 2150 |
| BseSI | GKGCMC | 2 cut(s) | 1035, 1333 |
| BseXI | GCAGC | 4 cut(s) | 1501, 1990, 2018, 2244 |
| BsgI | GTGCAG | 2 cut(s) | 370, 2130 |
| BshFI | GGCC | 8 cut(s) | 783, 1023, 1108, 1288, 1331, 1838, 2033, 2500 |
| BshNI | GGYRCC | 3 cut(s) | 65, 1815, 2393 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1420 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1361, 2184 |
| BslFI | GGGAC | 4 cut(s) | 512, 689, 1465, 1954 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 62, 503, 1144, 1448, 1598, 1603, 1900, 2075 |
| BsmAI | GTCTC | 4 cut(s) | 497, 646, 774, 1055 |
| BsmFI | GGGAC | 4 cut(s) | 512, 689, 1465, 1954 |
| BsnI | GGCC | 8 cut(s) | 783, 1023, 1108, 1288, 1331, 1838, 2033, 2500 |
| BsoBI | CYCGRG | 2 cut(s) | 1361, 2184 |
| Bsp119I | TTCGAA | 1 cut(s) | 37 |
| Bsp120I | GGGCCC | 1 cut(s) | 1329 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1035, 1195, 1333, 1420, 2191 |
| Bsp1407I | TGTACA | 1 cut(s) | 2223 |
| Bsp143I | GATC | 5 cut(s) | 882, 937, 1649, 1905, 2585 |
| Bsp19I | CCATGG | 2 cut(s) | 933, 1597 |
| BspACI | CCGC | 8 cut(s) | 135, 411, 860, 880, 1097, 1334, 1894, 2034 |
| BspANI | GGCC | 8 cut(s) | 783, 1023, 1108, 1288, 1331, 1838, 2033, 2500 |
| BspCNI | CTCAG | 9 cut(s) | 523, 889, 910, 1087, 1536, 1741, 1944, 2482, 2515 |
| BspHI | TCATGA | 1 cut(s) | 772 |
| BspMAI | CTGCAG | 1 cut(s) | 2008 |
| BspMI | ACCTGC | 2 cut(s) | 1326, 1723 |
| BspPI | GGATC | 4 cut(s) | 877, 890, 945, 1657 |
| BspQI | GCTCTTC | 1 cut(s) | 1155 |
| BspT104I | TTCGAA | 1 cut(s) | 37 |
| BspT107I | GGYRCC | 3 cut(s) | 65, 1815, 2393 |
| BspTI | CTTAAG | 1 cut(s) | 1909 |
| BsrBI | CCGCTC | 1 cut(s) | 1896 |
| BsrDI | GCAATG | 3 cut(s) | 1701, 2282, 2352 |
| BsrGI | TGTACA | 1 cut(s) | 2223 |
| BsrI | ACTGG | 7 cut(s) | 163, 301, 369, 604, 1128, 1391, 1769 |
| BssECI | CCNNGG | 5 cut(s) | 497, 933, 1289, 1446, 1597 |
| BssMI | GATC | 5 cut(s) | 882, 937, 1649, 1905, 2585 |
| BssSI | CACGAG | 1 cut(s) | 456 |
| BssT1I | CCWWGG | 5 cut(s) | 497, 933, 1289, 1446, 1597 |
| Bst2BI | CACGAG | 1 cut(s) | 456 |
| Bst2UI | CCWGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| Bst6I | CTCTTC | 4 cut(s) | 17, 948, 1155, 1425 |
| BstAFI | CTTAAG | 1 cut(s) | 1909 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1514, 1738, 2012 |
| BstAUI | TGTACA | 1 cut(s) | 2223 |
| BstBAI | YACGTR | 1 cut(s) | 2150 |
| BstBI | TTCGAA | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 3 cut(s) | 110, 1021, 2181 |
| BstDSI | CCRYGG | 2 cut(s) | 933, 1597 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 501, 1142 |
| BstF5I | GGATG | 9 cut(s) | 289, 364, 443, 710, 1812, 2065, 2267, 2524, 2545 |
| BstKTI | GATC | 5 cut(s) | 885, 940, 1652, 1908, 2588 |
| BstMAI | GTCTC | 4 cut(s) | 497, 646, 774, 1055 |
| BstMBI | GATC | 5 cut(s) | 882, 937, 1649, 1905, 2585 |
| BstNI | CCWGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| BstNSI | RCATGY | 3 cut(s) | 480, 590, 1508 |
| BstSCI | CCNGG | 6 cut(s) | 446, 1153, 1165, 1420, 1722, 2396 |
| BstSFI | CTRYAG | 1 cut(s) | 2004 |
| BstSLI | GKGCMC | 2 cut(s) | 1035, 1333 |
| BstV1I | GCAGC | 4 cut(s) | 1501, 1990, 2018, 2244 |
| BstV2I | GAAGAC | 2 cut(s) | 20, 672 |
| BstX2I | RGATCY | 3 cut(s) | 882, 1649, 1905 |
| BstYI | RGATCY | 3 cut(s) | 882, 1649, 1905 |
| Bsu36I | CCTNAGG | 2 cut(s) | 531, 1952 |
| BsuRI | GGCC | 8 cut(s) | 783, 1023, 1108, 1288, 1331, 1838, 2033, 2500 |
| BtgI | CCRYGG | 2 cut(s) | 933, 1597 |
| BtsCI | GGATG | 9 cut(s) | 289, 364, 443, 710, 1812, 2065, 2267, 2524, 2545 |
| BtsI | GCAGTG | 1 cut(s) | 2441 |
| BtsIMutI | CAGTG | 8 cut(s) | 170, 597, 598, 637, 724, 1121, 1477, 2441 |
| BveI | ACCTGC | 2 cut(s) | 1326, 1723 |
| Cac8I | GCNNGC | 3 cut(s) | 110, 1021, 2181 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2012, 2315 |
| CciI | TCATGA | 1 cut(s) | 772 |
| Cfr13I | GGNCC | 6 cut(s) | 676, 782, 1135, 1329, 1330, 1357 |
| Csp6I | GTAC | 4 cut(s) | 204, 1187, 1816, 2224 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2334, 2369 |
| CviQI | GTAC | 4 cut(s) | 204, 1187, 1816, 2224 |
| DpnI | GATC | 5 cut(s) | 884, 939, 1651, 1907, 2587 |
| DpnII | GATC | 5 cut(s) | 882, 937, 1649, 1905, 2585 |
| EaeI | YGGCCR | 2 cut(s) | 1836, 2031 |
| Eam1104I | CTCTTC | 4 cut(s) | 17, 948, 1155, 1425 |
| EarI | CTCTTC | 4 cut(s) | 17, 948, 1155, 1425 |
| EciI | GGCGGA | 1 cut(s) | 124 |
| Eco130I | CCWWGG | 5 cut(s) | 497, 933, 1289, 1446, 1597 |
| Eco24I | GRGCYC | 3 cut(s) | 1195, 1333, 2191 |
| Eco47I | GGWCC | 3 cut(s) | 676, 1135, 1357 |
| Eco57I | CTGAAG | 1 cut(s) | 2016 |
| Eco72I | CACGTG | 1 cut(s) | 2150 |
| Eco81I | CCTNAGG | 2 cut(s) | 531, 1952 |
| Eco88I | CYCGRG | 2 cut(s) | 1361, 2184 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 501, 1142 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1330, 1357 |
| EcoRII | CCWGG | 6 cut(s) | 446, 1153, 1165, 1420, 1722, 2396 |
| EcoT14I | CCWWGG | 5 cut(s) | 497, 933, 1289, 1446, 1597 |
| EcoT22I | ATGCAT | 3 cut(s) | 482, 2413, 2488 |
| EcoT38I | GRGCYC | 3 cut(s) | 1195, 1333, 2191 |
| ErhI | CCWWGG | 5 cut(s) | 497, 933, 1289, 1446, 1597 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1422, 1454 |
| FaqI | GGGAC | 4 cut(s) | 512, 689, 1465, 1954 |
| FauI | CCCGC | 1 cut(s) | 1341 |
| FauNDI | CATATG | 1 cut(s) | 2505 |
| FblI | GTMKAC | 3 cut(s) | 2325, 2447, 2578 |
| Fnu4HI | GCNGC | 6 cut(s) | 411, 1515, 2004, 2007, 2034, 2258 |
| FokI | GGATG | 9 cut(s) | 296, 351, 430, 717, 1819, 2072, 2254, 2531, 2532 |
| FriOI | GRGCYC | 3 cut(s) | 1195, 1333, 2191 |
| Fsp4HI | GCNGC | 6 cut(s) | 411, 1515, 2004, 2007, 2034, 2258 |
| FspBI | CTAG | 3 cut(s) | 755, 965, 1427 |
| GluI | GCNGC | 6 cut(s) | 411, 1515, 2004, 2007, 2034, 2258 |
| GsuI | CTGGAG | 2 cut(s) | 1176, 1845 |
| HaeIII | GGCC | 8 cut(s) | 783, 1023, 1108, 1288, 1331, 1838, 2033, 2500 |
| HincII | GTYRAC | 2 cut(s) | 2326, 2448 |
| HindII | GTYRAC | 2 cut(s) | 2326, 2448 |
| HindIII | AAGCTT | 2 cut(s) | 564, 2230 |
| HphI | GGTGA | 1 cut(s) | 1250 |
| Hpy166II | GTNNAC | 5 cut(s) | 1572, 2326, 2356, 2448, 2579 |
| Hpy188I | TCNGA | 6 cut(s) | 76, 887, 1526, 1847, 1891, 2491 |
| Hpy8I | GTNNAC | 5 cut(s) | 1572, 2326, 2356, 2448, 2579 |
| Hpy99I | CGWCG | 2 cut(s) | 146, 2586 |
| HpyAV | CCTTC | 5 cut(s) | 825, 882, 1484, 1536, 2116 |
| HpyCH4IV | ACGT | 4 cut(s) | 144, 1339, 2149, 2581 |
| HpySE526I | ACGT | 4 cut(s) | 144, 1339, 2149, 2581 |
| KpnI | GGTACC | 1 cut(s) | 1819 |
| Kzo9I | GATC | 5 cut(s) | 882, 937, 1649, 1905, 2585 |
| LguI | GCTCTTC | 1 cut(s) | 1155 |
| LmnI | GCTCC | 3 cut(s) | 506, 1157, 1423 |
| Lsp1109I | GCAGC | 4 cut(s) | 1501, 1990, 2018, 2244 |
| LweI | GCATC | 7 cut(s) | 274, 847, 1556, 1990, 2276, 2495, 2509 |
| MaeI | CTAG | 3 cut(s) | 755, 965, 1427 |
| MaeII | ACGT | 4 cut(s) | 144, 1339, 2149, 2581 |
| MaeIII | GTNAC | 5 cut(s) | 593, 1077, 1609, 1946, 2278 |
| MalI | GATC | 5 cut(s) | 884, 939, 1651, 1907, 2587 |
| MbiI | CCGCTC | 1 cut(s) | 1896 |
| MboI | GATC | 5 cut(s) | 882, 937, 1649, 1905, 2585 |
| MfeI | CAATTG | 1 cut(s) | 2384 |
| MflI | RGATCY | 3 cut(s) | 882, 1649, 1905 |
| MhlI | GDGCHC | 5 cut(s) | 1035, 1195, 1333, 1420, 2191 |
| MlsI | TGGCCA | 1 cut(s) | 1838 |
| MluNI | TGGCCA | 1 cut(s) | 1838 |
| MlyI | GAGTC | 4 cut(s) | 34, 872, 1606, 1815 |
| MmeI | TCCRAC | 4 cut(s) | 99, 1293, 2401, 2496 |
| Mox20I | TGGCCA | 1 cut(s) | 1838 |
| Mph1103I | ATGCAT | 3 cut(s) | 482, 2413, 2488 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2070 |
| MscI | TGGCCA | 1 cut(s) | 1838 |
| MseI | TTAA | 3 cut(s) | 221, 1910, 2294 |
| MslI | CAYNNNNRTG | 1 cut(s) | 591 |
| Msp20I | TGGCCA | 1 cut(s) | 1838 |
| MspA1I | CMGCKG | 4 cut(s) | 792, 880, 1994, 2036 |
| MspCI | CTTAAG | 1 cut(s) | 1909 |
| MspR9I | CCNGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| MunI | CAATTG | 1 cut(s) | 2384 |
| MvaI | CCWGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| NcoI | CCATGG | 2 cut(s) | 933, 1597 |
| NdeI | CATATG | 1 cut(s) | 2505 |
| NdeII | GATC | 5 cut(s) | 882, 937, 1649, 1905, 2585 |
| NmeAIII | GCCGAG | 2 cut(s) | 143, 2143 |
| NmuCI | GTSAC | 3 cut(s) | 593, 1609, 1946 |
| NsiI | ATGCAT | 3 cut(s) | 482, 2413, 2488 |
| NspI | RCATGY | 3 cut(s) | 480, 590, 1508 |
| NspV | TTCGAA | 1 cut(s) | 37 |
| PaeR7I | CTCGAG | 1 cut(s) | 1361 |
| PagI | TCATGA | 1 cut(s) | 772 |
| PciSI | GCTCTTC | 1 cut(s) | 1155 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2070 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 62, 1603 |
| PfoI | TCCNGGA | 2 cut(s) | 1153, 1165 |
| PkrI | GCNGC | 6 cut(s) | 412, 1516, 2005, 2008, 2035, 2259 |
| PleI | GAGTC | 4 cut(s) | 33, 871, 1606, 1815 |
| PmaCI | CACGTG | 1 cut(s) | 2150 |
| PmlI | CACGTG | 1 cut(s) | 2150 |
| PpsI | GAGTC | 4 cut(s) | 33, 871, 1606, 1815 |
| Ppu21I | YACGTR | 1 cut(s) | 2150 |
| PpuMI | RGGWCCY | 1 cut(s) | 1357 |
| Psp5II | RGGWCCY | 1 cut(s) | 1357 |
| Psp6I | CCWGG | 6 cut(s) | 446, 1153, 1165, 1420, 1722, 2396 |
| PspCI | CACGTG | 1 cut(s) | 2150 |
| PspGI | CCWGG | 6 cut(s) | 446, 1153, 1165, 1420, 1722, 2396 |
| PspOMI | GGGCCC | 1 cut(s) | 1329 |
| PspPI | GGNCC | 6 cut(s) | 676, 782, 1135, 1329, 1330, 1357 |
| PspPPI | RGGWCCY | 1 cut(s) | 1357 |
| PstI | CTGCAG | 1 cut(s) | 2008 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2012, 2315 |
| PsuI | RGATCY | 3 cut(s) | 882, 1649, 1905 |
| PvuII | CAGCTG | 2 cut(s) | 792, 1994 |
| RsaI | GTAC | 4 cut(s) | 205, 1188, 1817, 2225 |
| RsaNI | GTAC | 4 cut(s) | 204, 1187, 1816, 2224 |
| RseI | CAYNNNNRTG | 1 cut(s) | 591 |
| SalI | GTCGAC | 2 cut(s) | 2324, 2446 |
| SapI | GCTCTTC | 1 cut(s) | 1155 |
| SaqAI | TTAA | 3 cut(s) | 221, 1910, 2294 |
| SatI | GCNGC | 6 cut(s) | 411, 1515, 2004, 2007, 2034, 2258 |
| Sau3AI | GATC | 5 cut(s) | 882, 937, 1649, 1905, 2585 |
| Sau96I | GGNCC | 6 cut(s) | 676, 782, 1135, 1329, 1330, 1357 |
| SchI | GAGTC | 4 cut(s) | 34, 872, 1606, 1815 |
| ScrFI | CCNGG | 6 cut(s) | 448, 1155, 1167, 1422, 1724, 2398 |
| SduI | GDGCHC | 5 cut(s) | 1035, 1195, 1333, 1420, 2191 |
| SfaNI | GCATC | 7 cut(s) | 274, 847, 1556, 1990, 2276, 2495, 2509 |
| SfcI | CTRYAG | 1 cut(s) | 2004 |
| Sfr274I | CTCGAG | 1 cut(s) | 1361 |
| SfuI | TTCGAA | 1 cut(s) | 37 |
| SinI | GGWCC | 3 cut(s) | 676, 1135, 1357 |
| SlaI | CTCGAG | 1 cut(s) | 1361 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 591 |
| SmlI | CTYRAG | 3 cut(s) | 1361, 1909, 2473 |
| SmoI | CTYRAG | 3 cut(s) | 1361, 1909, 2473 |
| SsiI | CCGC | 8 cut(s) | 135, 411, 860, 880, 1097, 1334, 1894, 2034 |
| SspI | AATATT | 2 cut(s) | 832, 1984 |
| SspMI | CTAG | 3 cut(s) | 755, 965, 1427 |
| StyD4I | CCNGG | 6 cut(s) | 446, 1153, 1165, 1420, 1722, 2396 |
| StyI | CCWWGG | 5 cut(s) | 497, 933, 1289, 1446, 1597 |
| TaiI | ACGT | 4 cut(s) | 147, 1342, 2152, 2584 |
| TaqII | GACCGA | 1 cut(s) | 693 |
| TatI | WGTACW | 1 cut(s) | 2223 |
| TauI | GCSGC | 2 cut(s) | 413, 2036 |
| Tru1I | TTAA | 3 cut(s) | 221, 1910, 2294 |
| Tru9I | TTAA | 3 cut(s) | 221, 1910, 2294 |
| TscAI | CASTG | 8 cut(s) | 170, 598, 604, 637, 724, 1128, 1477, 2441 |
| TseFI | GTSAC | 3 cut(s) | 593, 1609, 1946 |
| TseI | GCWGC | 4 cut(s) | 1514, 2003, 2006, 2257 |
| Tsp45I | GTSAC | 3 cut(s) | 593, 1609, 1946 |
| TspDTI | ATGAA | 8 cut(s) | 934, 999, 1270, 1512, 1871, 2211, 2294, 2534 |
| TspGWI | ACGGA | 2 cut(s) | 1589, 2549 |
| TspRI | CASTG | 8 cut(s) | 170, 598, 604, 637, 724, 1128, 1477, 2441 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 62, 1603 |
| Vha464I | CTTAAG | 1 cut(s) | 1909 |
| VpaK11BI | GGWCC | 3 cut(s) | 676, 1135, 1357 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 501, 1142 |
| XapI | RAATTY | 1 cut(s) | 2198 |
| XbaI | TCTAGA | 1 cut(s) | 1426 |
| XceI | RCATGY | 3 cut(s) | 480, 590, 1508 |
| XhoI | CTCGAG | 1 cut(s) | 1361 |
| XmiI | GTMKAC | 3 cut(s) | 2325, 2447, 2578 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2070 |
| XspI | CTAG | 3 cut(s) | 755, 965, 1427 |
| Zsp2I | ATGCAT | 3 cut(s) | 482, 2413, 2488 |