MD11G1186900.v1.1

Nuclear cap-binding protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0007238
Physical Location & Seq
Forward (+)
26263532 .. 26273726
10195 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1186900.v1.1.491

Sequence Viewer

Length: 1992 bp
ATGCGTCAGACTGTTATCCTGTTCATTGTTTTACACTGCCTTGATTTCTTGGAAGATTTGTGGGGCCGAATACAAGTTTTATCTAGCAATGGATGGAAACTTGATAGTGTTCCTAGACCTCACCTATCATTTGAAGCACAGCTAGTTGCAGGAAAGTCTCACGAGTTTGGACCCATCAGCTGTCCTGACCAACCTGCTATGCCTTCAACAATGTCTAATATAACTTATGGTAAACAAAAGCATGATGCAGAGTTTATCTATCCACAAAGGATACGAAGGCTGAATATATTTCCTGAAAGCAAAACTGAGGATGTGCAACCCATGGATCGCTTCATCGTGGAAGAGTATCTGCTAGATGTGCTATTTTACTTAAATGGCTGTCGAAAAGAATGCGCTTCATATATGGCTGGCCTACCTGTGCCCTTTAGATATGAGTATCTTATGGCAGAGACAATTTTCTCCCAGTTGCTTATGCTACCACAACCCCCTTTCAGGCCAATATATTACACACTAGTTATTATCGACCTCTGTAAGGCTCTTCCCGGAGCCTTTCCTGCAGTAGTTGCTGGTGCTGTACGAGCTCTTTTTGACAAAATAGCTGATTTAGATATGGAATGTCAAACACGACTCATCCTTTGGTTTTCACACCACTTATCAAACTTTCAGTTCATCTGGCCATGGGAAGAGTGGGCTCATGTCTTAGACCTTCCAAAATGGGCCCCACAGCGTGTTTTTGTTCAGGAGGTGCTGGAGAGAGAAGTCCGTTTATCTTACTGGGATAAAGTGAAGCAGAGTATTGAGCATGCCCCTGGTCTAGAAGAGTTGCTTCCTCCCAAGGGAGCACCGAATTTCAAATTTAGCGTTGAAGAAACCAGCGAAGGAAATGAGCTAAATGCACTTTCTTCTGACCTCAGAAACATGGTGAAAGCTAGGGCATCTGCCCGTGAAATGATAGTATGGATAGAGGAAAGTGTGTTTCCTGTTCATGGGATGGAAGTTACCCTCAATGTGGTTGTGCAAACTCTCCTTGACATTGGATCTAAAAGTTTCACTCATTTGATTACTGTATTGGAGAGATATGGCCAAGTCATTGCAAAACTATGTGCTGACCAGGATAAGCAGGTCATGCTGATAAATGAGGTTGATTCTTACTGGAGGAATAATTCTCAAATGACTGCTATTGCAATAGATAGGATGATGGGATATCGACTTTTGTCTAATCTGGCCATTGTCAGATGGGTCTTTTTACCTGCAAACATTGAGCAATTTCATATATCAGATCGTCCATGGGAGATACTAAGAAATGCAGTTAGTAAGACATATAACCGTGTGTGTGATCTAAGGAAGGAGATTTCATCTATGAAAAAGAGTGTCGTATCAGCCGAAGAAGCTGCAGCAACGGTGAAAGCAGAGTTAGAAGCTTCTGAATCAAAGCTTTCACTCATGGATGGTGAACCTGTTATGGGGGAAAATCCTGGGAGGCTGAAGCGTTTGAAGTCACGTGCTGAAAAGGCTAAGGAGGATGCCGTGTCTGTACGTGAATCTTTAGAGGCTAAGGAGGCTCTTCTAGCCCGATCCCTTGATGAATTTGAGGCATTATTCTTCTCCTTGTACAAAAACTTCCTCAATGCGTTGACTGAACGGCTGCCAGAAGCATCGAAATGTGTTACATTGCAGGGATTAAAGGGGATTCATGCAGATTCTATGGCCGTTGACCATGAGGAATCATCCGCAATGGATCTCGACAATGAGAATAGAATACCCAAGAAAAGTGAACTGAATGGTGGGAAGACGAGTAATGTTTATAATGTAGGTGAAAAAGAGCAGTGGTGTCTATCGACTTTAGGCTACCTCAAGGCCTTCTCGAGGCAATATGCTTCTGAGATTTGGCCTCACATGGAGAAGTTGGATGAAGAGGTTCTAACCGAAGACGTGCATCCTCTTATTCGTAAATCAGTTTATTGTGGTCTTCGTCGAGCAACTGATGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000339 GO:0000375 GO:0000377 GO:0000394 GO:0000398 GO:0000956 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005845 GO:0005846 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0022414 GO:0031047 GO:0031050 GO:0031053 GO:0031503 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033993 GO:0034470 GO:0034518 GO:0034613 GO:0034641 GO:0034655 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0097159 GO:0097305 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901698 GO:1901699 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 map03013 map03015 map03040
Pfam Domains
Protein Families
MIF4G MIF4G_like MIF4G_like_2

Protein Analysis

664

Amino Acids

75.8

Weight (kDa)

5.57

Isoelectric Point (pI)

44.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIF4G_like PF09088 140 - 266 1.8e-38 MIF4G like
MIF4G_like_2 PF09090 284 - 606 4.8e-31 MIF4G like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1806
Acc36I ACCTGC 3 cut(s) 202, 1111, 1258
AciI CCGC 1 cut(s) 1731
AclWI GGATC 4 cut(s) 333, 1045, 1569, 1746
AcoI YGGCCR 4 cut(s) 674, 1081, 1224, 1707
AcsI RAATTY 3 cut(s) 847, 854, 1586
AcuI CTGAAG 1 cut(s) 1505
AcvI CACGTG 1 cut(s) 1502
AdeI CACNNNGTG 1 cut(s) 728
AfaI GTAC 3 cut(s) 576, 1536, 1613
AfiI CCNNNNNNNGG 7 cut(s) 492, 532, 836, 986, 1009, 1463, 1866
AgsI TTSAA 5 cut(s) 134, 207, 853, 866, 1495
AhlI ACTAGT 1 cut(s) 511
AjiI CACGTC 1 cut(s) 1933
AjnI CCWGG 3 cut(s) 808, 1110, 1474
AluBI AGCT 9 cut(s) 142, 180, 581, 599, 889, 929, 1391, 1421, 1435
AluI AGCT 9 cut(s) 142, 180, 581, 599, 889, 929, 1391, 1421, 1435
Alw21I GWGCWC 2 cut(s) 583, 844
Alw26I GTCTC 2 cut(s) 162, 443
AlwI GGATC 4 cut(s) 333, 1045, 1569, 1746
Ama87I CYCGRG 1 cut(s) 1864
ApaI GGGCCC 1 cut(s) 721
ApeKI GCWGC 3 cut(s) 1391, 1394, 1645
ApoI RAATTY 3 cut(s) 847, 854, 1586
ArsI GACNNNNNNTTYG 2 cut(s) 618, 650
Asp700I GAANNNNTTC 1 cut(s) 1917
AspLEI GCGC 1 cut(s) 395
AspS9I GGNCC 4 cut(s) 64, 170, 717, 718
AsuC2I CCSGG 1 cut(s) 543
AsuHPI GGTGA 5 cut(s) 113, 934, 1414, 1463, 1826
AvaI CYCGRG 1 cut(s) 1864
AvaII GGWCC 1 cut(s) 170
BaeGI GKGCMC 2 cut(s) 423, 721
BalI TGGCCA 3 cut(s) 676, 1083, 1226
BanII GRGCYC 3 cut(s) 583, 694, 721
BarI GAAGNNNNNNTAC 2 cut(s) 1604, 1636
BauI CACGAG 1 cut(s) 161
BbrPI CACGTG 1 cut(s) 1502
BbsI GAAGAC 3 cut(s) 1796, 1935, 1961
Bbv12I GWGCWC 2 cut(s) 583, 844
BbvI GCAGC 3 cut(s) 1378, 1406, 1632
BccI CCATC 7 cut(s) 87, 182, 985, 1192, 1230, 1442, 1979
BceAI ACGGC 3 cut(s) 1511, 1658, 1694
BcgI CGANNNNNNTGC 4 cut(s) 372, 406, 1373, 1407
BciT130I CCWGG 3 cut(s) 810, 1112, 1476
BciVI GTATCC 1 cut(s) 264
BcnI CCSGG 1 cut(s) 543
BcoDI GTCTC 2 cut(s) 162, 443
BcuI ACTAGT 1 cut(s) 511
BfaI CTAG 8 cut(s) 84, 114, 143, 353, 512, 815, 930, 1568
BfmI CTRYAG 2 cut(s) 555, 1392
BfuAI ACCTGC 3 cut(s) 202, 1111, 1258
BfuI GTATCC 1 cut(s) 264
BisI GCNGC 3 cut(s) 1392, 1395, 1646
BlsI GCNGC 3 cut(s) 1393, 1396, 1647
Bme1390I CCNGG 4 cut(s) 543, 810, 1112, 1476
Bme18I GGWCC 1 cut(s) 170
BmeT110I CYCGRG 1 cut(s) 1864
BmgBI CACGTC 1 cut(s) 1933
BmgT120I GGNCC 4 cut(s) 64, 170, 717, 718
BmiI GGNNCC 5 cut(s) 65, 172, 547, 719, 720
BmrFI CCNGG 4 cut(s) 543, 810, 1112, 1476
BmrI ACTGGG 2 cut(s) 457, 784
BmsI GCATC 5 cut(s) 235, 944, 1513, 1664, 1945
BmuI ACTGGG 2 cut(s) 457, 784
BoxI GACNNNNGTC 1 cut(s) 1213
BpiI GAAGAC 3 cut(s) 1796, 1935, 1961
BpmI CTGGAG 2 cut(s) 770, 1174
Bpu10I CCTNAGC 2 cut(s) 1515, 1554
BpuEI CTTGAG 1 cut(s) 1838
BpuMI CCSGG 1 cut(s) 543
BsaAI YACGTR 2 cut(s) 1502, 1538
BsaJI CCNNGG 6 cut(s) 321, 677, 808, 834, 1286, 1475
Bsc4I CCNNNNNNNGG 7 cut(s) 492, 532, 836, 986, 1009, 1463, 1866
Bse1I ACTGG 3 cut(s) 463, 779, 1157
Bse3DI GCAATG 4 cut(s) 94, 1089, 1670, 1740
BseBI CCWGG 3 cut(s) 810, 1112, 1476
BseDI CCNNGG 6 cut(s) 321, 677, 808, 834, 1286, 1475
BseLI CCNNNNNNNGG 7 cut(s) 492, 532, 836, 986, 1009, 1463, 1866
BseMI GCAATG 4 cut(s) 94, 1089, 1670, 1740
BseMII CTCAG 3 cut(s) 297, 925, 1872
BseNI ACTGG 3 cut(s) 463, 779, 1157
BseSI GKGCMC 2 cut(s) 423, 721
BseXI GCAGC 3 cut(s) 1378, 1406, 1632
BsiHKAI GWGCWC 2 cut(s) 583, 844
BsiHKCI CYCGRG 1 cut(s) 1864
BsiSI CCGG 1 cut(s) 543
BslI CCNNNNNNNGG 7 cut(s) 492, 532, 836, 986, 1009, 1463, 1866
BsmAI GTCTC 2 cut(s) 162, 443
BsmI GAATGC 1 cut(s) 395
BsoBI CYCGRG 1 cut(s) 1864
Bsp120I GGGCCC 1 cut(s) 717
Bsp1286I GDGCHC 5 cut(s) 423, 583, 694, 721, 844
Bsp1407I TGTACA 1 cut(s) 1611
Bsp143I GATC 6 cut(s) 325, 1037, 1279, 1336, 1574, 1738
Bsp19I CCATGG 3 cut(s) 321, 677, 1286
BspACI CCGC 1 cut(s) 1731
BspCNI CTCAG 3 cut(s) 298, 924, 1873
BspLI GGNNCC 5 cut(s) 65, 172, 547, 719, 720
BspMAI CTGCAG 2 cut(s) 559, 1396
BspMI ACCTGC 3 cut(s) 202, 1111, 1258
BspPI GGATC 4 cut(s) 333, 1045, 1569, 1746
BspQI GCTCTTC 2 cut(s) 543, 1569
BsrDI GCAATG 4 cut(s) 94, 1089, 1670, 1740
BsrGI TGTACA 1 cut(s) 1611
BsrI ACTGG 3 cut(s) 463, 779, 1157
BssECI CCNNGG 6 cut(s) 321, 677, 808, 834, 1286, 1475
BssMI GATC 6 cut(s) 325, 1037, 1279, 1336, 1574, 1738
BssSI CACGAG 1 cut(s) 161
BssT1I CCWWGG 4 cut(s) 321, 677, 834, 1286
Bst2BI CACGAG 1 cut(s) 161
Bst2UI CCWGG 3 cut(s) 810, 1112, 1476
Bst4CI ACNGT 4 cut(s) 13, 1066, 1328, 1402
Bst6I CTCTTC 6 cut(s) 336, 543, 678, 813, 1569, 1908
BstAPI GCANNNNNTGC 2 cut(s) 563, 1126
BstAUI TGTACA 1 cut(s) 1611
BstBAI YACGTR 2 cut(s) 1502, 1538
BstC8I GCNNGC 2 cut(s) 409, 804
BstDEI CTNAG 8 cut(s) 306, 700, 911, 1298, 1340, 1515, 1554, 1881
BstDSI CCRYGG 3 cut(s) 321, 677, 1286
BstENI CCTNNNNNAGG 2 cut(s) 530, 1864
BstHHI GCGC 1 cut(s) 395
BstKTI GATC 6 cut(s) 328, 1040, 1282, 1339, 1577, 1741
BstMAI GTCTC 2 cut(s) 162, 443
BstMBI GATC 6 cut(s) 325, 1037, 1279, 1336, 1574, 1738
BstMWI GCNNNNNNNGC 9 cut(s) 358, 554, 563, 578, 1126, 1388, 1511, 1559, 1568
BstNI CCWGG 3 cut(s) 810, 1112, 1476
BstNSI RCATGY 1 cut(s) 806
BstPAI GACNNNNGTC 1 cut(s) 1213
BstSCI CCNGG 4 cut(s) 541, 808, 1110, 1474
BstSFI CTRYAG 2 cut(s) 555, 1392
BstSLI GKGCMC 2 cut(s) 423, 721
BstV1I GCAGC 3 cut(s) 1378, 1406, 1632
BstV2I GAAGAC 3 cut(s) 1796, 1935, 1961
BstX2I RGATCY 2 cut(s) 1037, 1738
BstYI RGATCY 2 cut(s) 1037, 1738
BsuI GTATCC 1 cut(s) 264
BtgI CCRYGG 3 cut(s) 321, 677, 1286
BtrI CACGTC 1 cut(s) 1933
BtsI GCAGTG 2 cut(s) 34, 1832
BtsIMutI CAGTG 2 cut(s) 34, 1832
BveI ACCTGC 3 cut(s) 202, 1111, 1258
Cac8I GCNNGC 2 cut(s) 409, 804
CfoI GCGC 1 cut(s) 395
Cfr13I GGNCC 4 cut(s) 64, 170, 717, 718
Csp6I GTAC 3 cut(s) 575, 1535, 1612
CviQI GTAC 3 cut(s) 575, 1535, 1612
DdeI CTNAG 8 cut(s) 306, 700, 911, 1298, 1340, 1515, 1554, 1881
DpnI GATC 6 cut(s) 327, 1039, 1281, 1338, 1576, 1740
DpnII GATC 6 cut(s) 325, 1037, 1279, 1336, 1574, 1738
DraIII CACNNNGTG 1 cut(s) 728
EaeI YGGCCR 4 cut(s) 674, 1081, 1224, 1707
Eam1104I CTCTTC 6 cut(s) 336, 543, 678, 813, 1569, 1908
EarI CTCTTC 6 cut(s) 336, 543, 678, 813, 1569, 1908
Ecl136II GAGCTC 1 cut(s) 581
Eco130I CCWWGG 4 cut(s) 321, 677, 834, 1286
Eco147I AGGCCT 1 cut(s) 1859
Eco24I GRGCYC 3 cut(s) 583, 694, 721
Eco32I GATATC 1 cut(s) 1205
Eco47I GGWCC 1 cut(s) 170
Eco53kI GAGCTC 1 cut(s) 581
Eco57I CTGAAG 1 cut(s) 1505
Eco72I CACGTG 1 cut(s) 1502
Eco88I CYCGRG 1 cut(s) 1864
EcoICRI GAGCTC 1 cut(s) 581
EcoNI CCTNNNNNAGG 2 cut(s) 530, 1864
EcoO109I RGGNCCY 1 cut(s) 718
EcoRII CCWGG 3 cut(s) 808, 1110, 1474
EcoRV GATATC 1 cut(s) 1205
EcoT14I CCWWGG 4 cut(s) 321, 677, 834, 1286
EcoT38I GRGCYC 3 cut(s) 583, 694, 721
ErhI CCWWGG 4 cut(s) 321, 677, 834, 1286
FalI AAGNNNNNCTT 2 cut(s) 810, 842
Fnu4HI GCNGC 3 cut(s) 1392, 1395, 1646
FriOI GRGCYC 3 cut(s) 583, 694, 721
Fsp4HI GCNGC 3 cut(s) 1392, 1395, 1646
FspBI CTAG 8 cut(s) 84, 114, 143, 353, 512, 815, 930, 1568
GlaI GCGC 1 cut(s) 394
GluI GCNGC 3 cut(s) 1392, 1395, 1646
GsuI CTGGAG 2 cut(s) 770, 1174
HapII CCGG 1 cut(s) 543
HhaI GCGC 1 cut(s) 395
Hin6I GCGC 1 cut(s) 393
HinP1I GCGC 1 cut(s) 393
HincII GTYRAC 2 cut(s) 1635, 1714
HindII GTYRAC 2 cut(s) 1635, 1714
HindIII AAGCTT 2 cut(s) 1419, 1433
HinfI GANTC 7 cut(s) 627, 1145, 1427, 1541, 1690, 1700, 1724
HpaII CCGG 1 cut(s) 543
HphI GGTGA 5 cut(s) 113, 934, 1414, 1463, 1826
Hpy166II GTNNAC 5 cut(s) 233, 1454, 1635, 1714, 1775
Hpy188I TCNGA 7 cut(s) 9, 907, 914, 1235, 1279, 1426, 1882
Hpy188III TCNNGA 7 cut(s) 161, 185, 293, 740, 815, 1742, 1864
Hpy8I GTNNAC 5 cut(s) 233, 1454, 1635, 1714, 1775
Hpy99I CGWCG 1 cut(s) 1977
HpyAV CCTTC 6 cut(s) 213, 270, 716, 872, 1339, 1870
HpyCH4III ACNGT 4 cut(s) 13, 1066, 1328, 1402
HpyCH4IV ACGT 3 cut(s) 1501, 1537, 1932
HpyF10VI GCNNNNNNNGC 9 cut(s) 358, 554, 563, 578, 1126, 1388, 1511, 1559, 1568
HpyF3I CTNAG 8 cut(s) 306, 700, 911, 1298, 1340, 1515, 1554, 1881
HpySE526I ACGT 3 cut(s) 1501, 1537, 1932
HspAI GCGC 1 cut(s) 393
Kzo9I GATC 6 cut(s) 325, 1037, 1279, 1336, 1574, 1738
LguI GCTCTTC 2 cut(s) 543, 1569
LmnI GCTCC 2 cut(s) 545, 839
Lsp1109I GCAGC 3 cut(s) 1378, 1406, 1632
LweI GCATC 5 cut(s) 235, 944, 1513, 1664, 1945
MaeI CTAG 8 cut(s) 84, 114, 143, 353, 512, 815, 930, 1568
MaeII ACGT 3 cut(s) 1501, 1537, 1932
MaeIII GTNAC 3 cut(s) 997, 1497, 1666
MalI GATC 6 cut(s) 327, 1039, 1281, 1338, 1576, 1740
MboI GATC 6 cut(s) 325, 1037, 1279, 1336, 1574, 1738
MflI RGATCY 2 cut(s) 1037, 1738
MhlI GDGCHC 5 cut(s) 423, 583, 694, 721, 844
MlsI TGGCCA 3 cut(s) 676, 1083, 1226
MluCI AATT 6 cut(s) 453, 847, 854, 1162, 1265, 1586
MluNI TGGCCA 3 cut(s) 676, 1083, 1226
MlyI GAGTC 1 cut(s) 621
MmeI TCCRAC 1 cut(s) 1887
Mox20I TGGCCA 3 cut(s) 676, 1083, 1226
MroXI GAANNNNTTC 1 cut(s) 1917
MscI TGGCCA 3 cut(s) 676, 1083, 1226
MseI TTAA 2 cut(s) 371, 1682
MslI CAYNNNNRTG 1 cut(s) 1660
Msp20I TGGCCA 3 cut(s) 676, 1083, 1226
MspA1I CMGCKG 1 cut(s) 180
MspI CCGG 1 cut(s) 543
MspR9I CCNGG 4 cut(s) 543, 810, 1112, 1476
Mva1269I GAATGC 1 cut(s) 395
MvaI CCWGG 3 cut(s) 810, 1112, 1476
MwoI GCNNNNNNNGC 9 cut(s) 358, 554, 563, 578, 1126, 1388, 1511, 1559, 1568
NciI CCSGG 1 cut(s) 543
NcoI CCATGG 3 cut(s) 321, 677, 1286
NdeII GATC 6 cut(s) 325, 1037, 1279, 1336, 1574, 1738
NlaIV GGNNCC 5 cut(s) 65, 172, 547, 719, 720
NmuCI GTSAC 1 cut(s) 1497
NspI RCATGY 1 cut(s) 806
PaeI GCATGC 1 cut(s) 806
PaeR7I CTCGAG 1 cut(s) 1864
PceI AGGCCT 1 cut(s) 1859
PciSI GCTCTTC 2 cut(s) 543, 1569
PcsI WCGNNNNNNNCGW 1 cut(s) 1380
PctI GAATGC 1 cut(s) 395
PdmI GAANNNNTTC 1 cut(s) 1917
PfeI GAWTC 6 cut(s) 1145, 1427, 1541, 1690, 1700, 1724
PfoI TCCNGGA 1 cut(s) 541
PkrI GCNGC 3 cut(s) 1393, 1396, 1647
PleI GAGTC 1 cut(s) 621
PmaCI CACGTG 1 cut(s) 1502
PmlI CACGTG 1 cut(s) 1502
PpsI GAGTC 1 cut(s) 621
Ppu21I YACGTR 2 cut(s) 1502, 1538
PshAI GACNNNNGTC 1 cut(s) 1213
PsiI TTATAA 1 cut(s) 1806
Psp124BI GAGCTC 1 cut(s) 583
Psp6I CCWGG 3 cut(s) 808, 1110, 1474
PspCI CACGTG 1 cut(s) 1502
PspGI CCWGG 3 cut(s) 808, 1110, 1474
PspN4I GGNNCC 5 cut(s) 65, 172, 547, 719, 720
PspOMI GGGCCC 1 cut(s) 717
PspPI GGNCC 4 cut(s) 64, 170, 717, 718
PstI CTGCAG 2 cut(s) 559, 1396
PsuI RGATCY 2 cut(s) 1037, 1738
PvuII CAGCTG 1 cut(s) 180
RsaI GTAC 3 cut(s) 576, 1536, 1613
RsaNI GTAC 3 cut(s) 575, 1535, 1612
RseI CAYNNNNRTG 1 cut(s) 1660
SacI GAGCTC 1 cut(s) 583
SapI GCTCTTC 2 cut(s) 543, 1569
SaqAI TTAA 2 cut(s) 371, 1682
SatI GCNGC 3 cut(s) 1392, 1395, 1646
Sau3AI GATC 6 cut(s) 325, 1037, 1279, 1336, 1574, 1738
Sau96I GGNCC 4 cut(s) 64, 170, 717, 718
SchI GAGTC 1 cut(s) 621
ScrFI CCNGG 4 cut(s) 543, 810, 1112, 1476
SduI GDGCHC 5 cut(s) 423, 583, 694, 721, 844
SfaNI GCATC 5 cut(s) 235, 944, 1513, 1664, 1945
SfcI CTRYAG 2 cut(s) 555, 1392
Sfr274I CTCGAG 1 cut(s) 1864
SinI GGWCC 1 cut(s) 170
SlaI CTCGAG 1 cut(s) 1864
SmiMI CAYNNNNRTG 1 cut(s) 1660
SmlI CTYRAG 2 cut(s) 1853, 1864
SmoI CTYRAG 2 cut(s) 1853, 1864
SpeI ACTAGT 1 cut(s) 511
SphI GCATGC 1 cut(s) 806
Sse9I AATT 6 cut(s) 453, 847, 854, 1162, 1265, 1586
SseBI AGGCCT 1 cut(s) 1859
SsiI CCGC 1 cut(s) 1731
SspMI CTAG 8 cut(s) 84, 114, 143, 353, 512, 815, 930, 1568
SstI GAGCTC 1 cut(s) 583
StuI AGGCCT 1 cut(s) 1859
StyD4I CCNGG 4 cut(s) 541, 808, 1110, 1474
StyI CCWWGG 4 cut(s) 321, 677, 834, 1286
TaaI ACNGT 4 cut(s) 13, 1066, 1328, 1402
TaiI ACGT 3 cut(s) 1504, 1540, 1935
TaqI TCGA 8 cut(s) 382, 522, 1207, 1658, 1743, 1838, 1865, 1975
TasI AATT 6 cut(s) 453, 847, 854, 1162, 1265, 1586
TatI WGTACW 1 cut(s) 1611
TfiI GAWTC 6 cut(s) 1145, 1427, 1541, 1690, 1700, 1724
Tru1I TTAA 2 cut(s) 371, 1682
Tru9I TTAA 2 cut(s) 371, 1682
TscAI CASTG 2 cut(s) 41, 1832
TseFI GTSAC 1 cut(s) 1497
TseI GCWGC 3 cut(s) 1391, 1394, 1645
Tsp45I GTSAC 1 cut(s) 1497
TspGWI ACGGA 1 cut(s) 752
TspRI CASTG 2 cut(s) 41, 1832
VpaK11BI GGWCC 1 cut(s) 170
XagI CCTNNNNNAGG 2 cut(s) 530, 1864
XapI RAATTY 3 cut(s) 847, 854, 1586
XbaI TCTAGA 1 cut(s) 814
XceI RCATGY 1 cut(s) 806
XcmI CCANNNNNNNNNTGG 1 cut(s) 684
XhoI CTCGAG 1 cut(s) 1864
XmnI GAANNNNTTC 1 cut(s) 1917
XspI CTAG 8 cut(s) 84, 114, 143, 353, 512, 815, 930, 1568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.