RchiOBHm_Chr5g0051141

Nuclear cap-binding protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0007238
Physical Location & Seq
Forward (+)
52047816 .. 52061222
13407 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32863

Sequence Viewer

Length: 2595 bp
ATGAGTGGTTGGAAGAGTCTTCTTCTTCGAATCGGCGAAAATTGCCCGGACTATGGCACCTCCGCCGACTTCAAAGAGCACATTGAAACTTGCTTTGGCGTGCTTCGCCGAGAATTAGAACACTCCGCCCACGACGTTTTGCAATTCCTTATCCAGTGTGCTGAACAGTTGCCTCACAAGATTCCTCTATACAGTACCGTGATTGGCTTGTTAAACTTGGAGAATGAGGATTTTATCAGGAAACTTGTGGAGAACACTCAAAGTAATTTTCAGGATGCCTTAGATACTGGAAATTGCAACAAGATTCGTATTTTGATGAGGTTCCTGACTGCTATGATGTGCAGTAAAGTTCTCCATCCCAGTTCGCTTGTGATTGTGTTTGAAACATTATTATCATCTGCCGCAACAACAGTTGATGAGGAGAAAGGGAATCCATCCTGGCAATCACGAGCTGACTTTTACATAACATGCATTTTATCCTGTCTCCCTTGGGGAGGAGCAGAACTGATTGAGCAAGTCCCTGAGGAAATTGAAAGAGTTATGGTTGGTGTAGAAGCTTATTTGAGCATAAGAAAGCATGTCAGTGACACTGGGTTGTCTTTTTTTGAGGCTGATGATGACAGTGCAAAAGTCTCTACTGATAAGGATTTTTTGGAAGATTTGTGGGACCGAATACAAGTTCTATCTAATAATGGATGGAAACTTGACAGTGTTCCAAGACCTCACTTATCATTTGAAGCACAGCTAGTCAATGGAAAGTCTCATGAGTTTGGCCCCATCAGCTGTCCTGACCAACCTGAACTGCCTTCAACGAGTTCCAATATTACTTATGGGAAACAAAAGCATGATGCGGAGTCAATTTATCCTCAGCGGATCCGAAGGCTGAATATATTTCCTGCAAATAAAACTGAGGATATGGAACCCATGGATCGCTTCATTGTGGAAGAGTATCTGCTAGATGTGCTTTTTTTCTTAAATGGCTGTCGAAAGGAATGTGCTTCATACATGGCTGGCCTACCTGTGCCCTTTAGATATGAGTATCTTATGGCAGAGACAATTTTCTCTCAGTTACTTCTGCTACCACAACCGCCTTTCAGGCCAACATATTACACACTGGTTATTATGGACCTTTGTAAGGCTCTTCCTGGAGCCTTTCCAGGAGTGGTTGCTGGTGCTGTACGGGCTCTTTTCGAGAAAATAGCTGATTTAGATATGGAATGTCGAACACGGCTAATCCTTTGGTTTTCTCACCACTTATCCAACTTTCAGTTCATCTGGCCTTGGGAGGAGTGGGCTTATGTCCTAGACCTGCCAAAGTGGGCCCCGCAACGTGTATTTGTTCAGGAGGTCCTCGAGAGAGAAGTTCGTTTGTCCTACTGGGAAAAAGTGAAGCAGAGTATTGAGAGTGCTCCTGGTCTAGAAGAGTTGCTTCCTCCCAAGGGGACACCAAACTTCAAGTTCAGTGTTGAAGAAAGCATGGAAGGAAATGAACAACATGCACTTGCTGCTGAACTCAGAAACATGGTAAAAGGAAAGGCATCTGCCCGTGAAATAATCTTGTGGATAGAGGAAAGTCTGTTTCCTGTCCATCGTATGGAAGTGACTCTAACTGTGGTTGTGCAAACTCTCCTCGACATTGGATCTAAAAGTTTCACTCATTTGATTACTGTATTGGAGAGATATGGTCAAGTCGTTGCAAAACTATGTGCTGACCAGGATAAGCAGGTCATGCTGATAACTGAGATTGATTCTTACTGGAAGAACAATGCTCAAATGACTGCTATTGCAATAGATAGGATGATGGGGTACCGACTCTTATCTAATCTGGCCATTGTCAGATGGGTCTTTTCTCCAGAAAATGTTGAGCAATTTCATTTATCAGACCGCTCATGGGAGATCTTAAGAAATGCAGTTGGCAAGACATATAACCGTGTATGTGACCTGAGGAAAGAGATTTTGTCCCTGAAAAAGAATATTGTATCAGCTGAAGATGCTGCAGCAACTGCAAAAGCAGAGTTAGTGGCCGCTGAATCAAAGCTCTCACTTATGGATGGAGAACCTGTTCTTGGGGAAAATCCTATGAGGTTGAAGCGTTTGAAATCCTATGCTGAGAAGGCAAAGGAGGAGGAGGTGTCTGCACGTGAATCTTTAGAGGCTAAGGAGGCTCTGCTTGCCCGAGCCCTTGATGAATTTGAGGCATTGTTTTTCTTATTGTACAAAAGCTTCGTGAATGTCTTGATGGAACGGCTGCCAGAGGCATCCAAAGTTGTTACATTGCAGGGATTAAAGTCGATTCATGCAGATTCTGTGTCAGTCGACCTTGAAGAATCATCTGCAATGGAGGTGGACGATGAGAATGGAAAATCTAAAAGTCAATTGAATGGTGCCAGGACAGGTAATGCATATAATGTTGGAGAAAAAGAGCAGTGGTGTCTGTCGACATTAGGCTACCTCAAAGCGTTCTCAAGGCAATATGCGTCTGAGATATGGCCTCATATGGAGAGGTTGGATGCTGAGGTCATAACGGAGAATGTTCATCCCCTTATACGAAAAGCAATCTACTGTGGTCTACGTCGATCAACTGATGGGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000339 GO:0000375 GO:0000377 GO:0000394 GO:0000398 GO:0000956 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005845 GO:0005846 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0022414 GO:0031047 GO:0031050 GO:0031053 GO:0031503 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033993 GO:0034470 GO:0034518 GO:0034613 GO:0034641 GO:0034655 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0097159 GO:0097305 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901698 GO:1901699 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 map03013 map03015 map03040
Pfam Domains
Protein Families
MIF4G MIF4G_like MIF4G_like_2

Protein Analysis

864

Amino Acids

98.34

Weight (kDa)

5.19

Isoelectric Point (pI)

41.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIF4G PF02854 20 - 224 1.8e-31 MIF4G domain
MIF4G_like PF09088 342 - 467 2.3e-36 MIF4G like
MIF4G_like_2 PF09090 493 - 828 2.6e-32 MIF4G like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1317, 1714
Acc65I GGTACC 1 cut(s) 1806
AccB1I GGYRCC 3 cut(s) 56, 1806, 2384
AccB7I CCANNNNNTGG 1 cut(s) 1594
AccBSI CCGCTC 1 cut(s) 1887
AccI GTMKAC 3 cut(s) 2316, 2438, 2569
AciI CCGC 9 cut(s) 63, 126, 402, 851, 871, 1088, 1325, 1885, 2025
AclWI GGATC 4 cut(s) 868, 881, 936, 1648
AcoI YGGCCR 2 cut(s) 1827, 2022
AcsI RAATTY 1 cut(s) 2189
AcuI CTGAAG 1 cut(s) 2007
AcvI CACGTG 1 cut(s) 2141
AfaI GTAC 4 cut(s) 196, 1179, 1808, 2216
AfiI CCNNNNNNNGG 7 cut(s) 53, 494, 1135, 1439, 1594, 1891, 2066
AflII CTTAAG 1 cut(s) 1900
AflIII ACRYGT 1 cut(s) 1330
AjnI CCWGG 6 cut(s) 437, 1144, 1156, 1411, 1713, 2387
AjuI GAANNNNNNNTTGG 6 cut(s) 78, 110, 1253, 1285, 2049, 2081
AloI GAACNNNNNNTCC 2 cut(s) 2046, 2078
AluBI AGCT 8 cut(s) 452, 557, 745, 783, 1202, 1985, 2038, 2223
AluI AGCT 8 cut(s) 452, 557, 745, 783, 1202, 1985, 2038, 2223
Alw21I GWGCWC 2 cut(s) 81, 1411
Alw26I GTCTC 4 cut(s) 488, 637, 765, 1046
AlwI GGATC 4 cut(s) 868, 881, 936, 1648
AlwNI CAGNNNCTG 2 cut(s) 2003, 2306
Ama87I CYCGRG 2 cut(s) 1352, 2175
AoxI GGCC 8 cut(s) 772, 1012, 1097, 1277, 1320, 1827, 2022, 2489
ApaI GGGCCC 1 cut(s) 1324
ApeKI GCWGC 4 cut(s) 1505, 1994, 1997, 2248
ApoI RAATTY 1 cut(s) 2189
Asp700I GAANNNNTTC 1 cut(s) 2061
Asp718I GGTACC 1 cut(s) 1806
AspS9I GGNCC 6 cut(s) 667, 773, 1126, 1320, 1321, 1348
AsuC2I CCSGG 1 cut(s) 47
AsuHPI GGTGA 1 cut(s) 1241
AsuII TTCGAA 1 cut(s) 28
AvaI CYCGRG 2 cut(s) 1352, 2175
AvaII GGWCC 3 cut(s) 667, 1126, 1348
AxyI CCTNAGG 2 cut(s) 522, 1943
BaeGI GKGCMC 2 cut(s) 1026, 1324
BalI TGGCCA 1 cut(s) 1829
BamHI GGATCC 1 cut(s) 873
BanI GGYRCC 3 cut(s) 56, 1806, 2384
BanII GRGCYC 3 cut(s) 1186, 1324, 2182
BarI GAAGNNNNNNTAC 2 cut(s) 2207, 2239
BauI CACGAG 1 cut(s) 447
BbrPI CACGTG 1 cut(s) 2141
BbsI GAAGAC 1 cut(s) 11
Bbv12I GWGCWC 2 cut(s) 81, 1411
BbvCI CCTCAGC 2 cut(s) 867, 2514
BbvI GCAGC 4 cut(s) 1492, 1981, 2009, 2235
BceAI ACGGC 2 cut(s) 1244, 2261
BciT130I CCWGG 6 cut(s) 439, 1146, 1158, 1413, 1715, 2389
BcnI CCSGG 1 cut(s) 47
BcoDI GTCTC 4 cut(s) 488, 637, 765, 1046
BfaI CTAG 4 cut(s) 746, 956, 1304, 1418
BfmI CTRYAG 1 cut(s) 1995
BfrI CTTAAG 1 cut(s) 1900
BfuAI ACCTGC 2 cut(s) 1317, 1714
BglI GCCNNNNNGGC 1 cut(s) 1096
BglII AGATCT 1 cut(s) 1896
BisI GCNGC 6 cut(s) 402, 1506, 1995, 1998, 2025, 2249
BlsI GCNGC 6 cut(s) 403, 1507, 1996, 1999, 2026, 2250
Bme1390I CCNGG 7 cut(s) 47, 439, 1146, 1158, 1413, 1715, 2389
Bme18I GGWCC 3 cut(s) 667, 1126, 1348
BmeT110I CYCGRG 2 cut(s) 1352, 2175
BmgT120I GGNCC 6 cut(s) 667, 773, 1126, 1320, 1321, 1348
BmrFI CCNGG 7 cut(s) 47, 439, 1146, 1158, 1413, 1715, 2389
BmrI ACTGGG 3 cut(s) 354, 600, 1387
BmsI GCATC 6 cut(s) 265, 838, 1547, 1981, 2267, 2500
BmuI ACTGGG 3 cut(s) 354, 600, 1387
BpiI GAAGAC 1 cut(s) 11
BpmI CTGGAG 2 cut(s) 1167, 1836
Bpu10I CCTNAGC 3 cut(s) 867, 2157, 2514
Bpu14I TTCGAA 1 cut(s) 28
BpuEI CTTGAG 1 cut(s) 2449
BpuMI CCSGG 1 cut(s) 47
BsaAI YACGTR 1 cut(s) 2141
BsaJI CCNNGG 4 cut(s) 488, 924, 1280, 1437
BsaXI ACNNNNNCTCC 4 cut(s) 2046, 2076, 2117, 2147
Bsc4I CCNNNNNNNGG 7 cut(s) 53, 494, 1135, 1439, 1594, 1891, 2066
Bse1I ACTGG 7 cut(s) 154, 292, 360, 595, 1119, 1382, 1760
Bse21I CCTNAGG 2 cut(s) 522, 1943
Bse3DI GCAATG 2 cut(s) 2273, 2343
BseBI CCWGG 6 cut(s) 439, 1146, 1158, 1413, 1715, 2389
BseDI CCNNGG 4 cut(s) 488, 924, 1280, 1437
BseGI GGATG 9 cut(s) 280, 355, 434, 701, 1803, 2056, 2258, 2515, 2536
BseLI CCNNNNNNNGG 7 cut(s) 53, 494, 1135, 1439, 1594, 1891, 2066
BseMI GCAATG 2 cut(s) 2273, 2343
BseNI ACTGG 7 cut(s) 154, 292, 360, 595, 1119, 1382, 1760
BseRI GAGGAG 6 cut(s) 434, 510, 1301, 1619, 2138, 2141
BseSI GKGCMC 2 cut(s) 1026, 1324
BseXI GCAGC 4 cut(s) 1492, 1981, 2009, 2235
BsgI GTGCAG 2 cut(s) 361, 2121
BshFI GGCC 8 cut(s) 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491
BshNI GGYRCC 3 cut(s) 56, 1806, 2384
BsiHKAI GWGCWC 2 cut(s) 81, 1411
BsiHKCI CYCGRG 2 cut(s) 1352, 2175
BsiSI CCGG 1 cut(s) 47
BslFI GGGAC 4 cut(s) 503, 680, 1456, 1945
BslI CCNNNNNNNGG 7 cut(s) 53, 494, 1135, 1439, 1594, 1891, 2066
BsmAI GTCTC 4 cut(s) 488, 637, 765, 1046
BsmFI GGGAC 4 cut(s) 503, 680, 1456, 1945
BsnI GGCC 8 cut(s) 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491
BsoBI CYCGRG 2 cut(s) 1352, 2175
Bsp119I TTCGAA 1 cut(s) 28
Bsp120I GGGCCC 1 cut(s) 1320
Bsp1286I GDGCHC 6 cut(s) 81, 1026, 1186, 1324, 1411, 2182
Bsp1407I TGTACA 1 cut(s) 2214
Bsp143I GATC 5 cut(s) 873, 928, 1640, 1896, 2576
Bsp19I CCATGG 1 cut(s) 924
BspACI CCGC 9 cut(s) 63, 126, 402, 851, 871, 1088, 1325, 1885, 2025
BspANI GGCC 8 cut(s) 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491
BspHI TCATGA 1 cut(s) 763
BspMAI CTGCAG 1 cut(s) 1999
BspMI ACCTGC 2 cut(s) 1317, 1714
BspPI GGATC 4 cut(s) 868, 881, 936, 1648
BspQI GCTCTTC 1 cut(s) 1146
BspT104I TTCGAA 1 cut(s) 28
BspT107I GGYRCC 3 cut(s) 56, 1806, 2384
BspTI CTTAAG 1 cut(s) 1900
BsrBI CCGCTC 1 cut(s) 1887
BsrDI GCAATG 2 cut(s) 2273, 2343
BsrGI TGTACA 1 cut(s) 2214
BsrI ACTGG 7 cut(s) 154, 292, 360, 595, 1119, 1382, 1760
BssECI CCNNGG 4 cut(s) 488, 924, 1280, 1437
BssMI GATC 5 cut(s) 873, 928, 1640, 1896, 2576
BssSI CACGAG 1 cut(s) 447
BssT1I CCWWGG 4 cut(s) 488, 924, 1280, 1437
Bst2BI CACGAG 1 cut(s) 447
Bst2UI CCWGG 6 cut(s) 439, 1146, 1158, 1413, 1715, 2389
Bst6I CTCTTC 4 cut(s) 8, 939, 1146, 1416
BstAFI CTTAAG 1 cut(s) 1900
BstAPI GCANNNNNTGC 3 cut(s) 1505, 1729, 2003
BstAUI TGTACA 1 cut(s) 2214
BstBAI YACGTR 1 cut(s) 2141
BstBI TTCGAA 1 cut(s) 28
BstC8I GCNNGC 3 cut(s) 101, 1012, 2172
BstDSI CCRYGG 1 cut(s) 924
BstENI CCTNNNNNAGG 2 cut(s) 492, 1133
BstF5I GGATG 9 cut(s) 280, 355, 434, 701, 1803, 2056, 2258, 2515, 2536
BstKTI GATC 5 cut(s) 876, 931, 1643, 1899, 2579
BstMAI GTCTC 4 cut(s) 488, 637, 765, 1046
BstMBI GATC 5 cut(s) 873, 928, 1640, 1896, 2576
BstNI CCWGG 6 cut(s) 439, 1146, 1158, 1413, 1715, 2389
BstNSI RCATGY 3 cut(s) 471, 581, 1499
BstSCI CCNGG 7 cut(s) 45, 437, 1144, 1156, 1411, 1713, 2387
BstSFI CTRYAG 1 cut(s) 1995
BstSLI GKGCMC 2 cut(s) 1026, 1324
BstV1I GCAGC 4 cut(s) 1492, 1981, 2009, 2235
BstV2I GAAGAC 1 cut(s) 11
BstX2I RGATCY 3 cut(s) 873, 1640, 1896
BstYI RGATCY 3 cut(s) 873, 1640, 1896
Bsu36I CCTNAGG 2 cut(s) 522, 1943
BsuRI GGCC 8 cut(s) 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491
BtgI CCRYGG 1 cut(s) 924
BtsCI GGATG 9 cut(s) 280, 355, 434, 701, 1803, 2056, 2258, 2515, 2536
BtsI GCAGTG 1 cut(s) 2432
BtsIMutI CAGTG 8 cut(s) 161, 588, 589, 628, 715, 1112, 1468, 2432
BveI ACCTGC 2 cut(s) 1317, 1714
Cac8I GCNNGC 3 cut(s) 101, 1012, 2172
CaiI CAGNNNCTG 2 cut(s) 2003, 2306
CciI TCATGA 1 cut(s) 763
Cfr13I GGNCC 6 cut(s) 667, 773, 1126, 1320, 1321, 1348
CseI GACGC 1 cut(s) 2466
Csp6I GTAC 4 cut(s) 195, 1178, 1807, 2215
CspCI CAANNNNNGTGG 2 cut(s) 2325, 2360
CviQI GTAC 4 cut(s) 195, 1178, 1807, 2215
DpnI GATC 5 cut(s) 875, 930, 1642, 1898, 2578
DpnII GATC 5 cut(s) 873, 928, 1640, 1896, 2576
EaeI YGGCCR 2 cut(s) 1827, 2022
Eam1104I CTCTTC 4 cut(s) 8, 939, 1146, 1416
EarI CTCTTC 4 cut(s) 8, 939, 1146, 1416
EciI GGCGGA 2 cut(s) 52, 115
Eco130I CCWWGG 4 cut(s) 488, 924, 1280, 1437
Eco24I GRGCYC 3 cut(s) 1186, 1324, 2182
Eco47I GGWCC 3 cut(s) 667, 1126, 1348
Eco57I CTGAAG 1 cut(s) 2007
Eco72I CACGTG 1 cut(s) 2141
Eco81I CCTNAGG 2 cut(s) 522, 1943
Eco88I CYCGRG 2 cut(s) 1352, 2175
EcoNI CCTNNNNNAGG 2 cut(s) 492, 1133
EcoO109I RGGNCCY 2 cut(s) 1321, 1348
EcoRII CCWGG 6 cut(s) 437, 1144, 1156, 1411, 1713, 2387
EcoT14I CCWWGG 4 cut(s) 488, 924, 1280, 1437
EcoT22I ATGCAT 2 cut(s) 473, 2404
EcoT38I GRGCYC 3 cut(s) 1186, 1324, 2182
ErhI CCWWGG 4 cut(s) 488, 924, 1280, 1437
FalI AAGNNNNNCTT 2 cut(s) 1413, 1445
FaqI GGGAC 4 cut(s) 503, 680, 1456, 1945
FauI CCCGC 1 cut(s) 1332
FauNDI CATATG 1 cut(s) 2496
FblI GTMKAC 3 cut(s) 2316, 2438, 2569
Fnu4HI GCNGC 6 cut(s) 402, 1506, 1995, 1998, 2025, 2249
FokI GGATG 9 cut(s) 287, 342, 421, 708, 1810, 2063, 2245, 2522, 2523
FriOI GRGCYC 3 cut(s) 1186, 1324, 2182
Fsp4HI GCNGC 6 cut(s) 402, 1506, 1995, 1998, 2025, 2249
FspBI CTAG 4 cut(s) 746, 956, 1304, 1418
GluI GCNGC 6 cut(s) 402, 1506, 1995, 1998, 2025, 2249
GsuI CTGGAG 2 cut(s) 1167, 1836
HaeIII GGCC 8 cut(s) 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491
HapII CCGG 1 cut(s) 47
HgaI GACGC 1 cut(s) 2466
HincII GTYRAC 2 cut(s) 2317, 2439
HindII GTYRAC 2 cut(s) 2317, 2439
HindIII AAGCTT 2 cut(s) 555, 2221
HpaII CCGG 1 cut(s) 47
HphI GGTGA 1 cut(s) 1241
Hpy166II GTNNAC 4 cut(s) 2317, 2347, 2439, 2570
Hpy188I TCNGA 5 cut(s) 878, 1517, 1838, 1882, 2482
Hpy8I GTNNAC 4 cut(s) 2317, 2347, 2439, 2570
Hpy99I CGWCG 2 cut(s) 137, 2577
HpyAV CCTTC 4 cut(s) 816, 873, 1475, 2107
HpyCH4IV ACGT 4 cut(s) 135, 1330, 2140, 2572
HpySE526I ACGT 4 cut(s) 135, 1330, 2140, 2572
KpnI GGTACC 1 cut(s) 1810
Kzo9I GATC 5 cut(s) 873, 928, 1640, 1896, 2576
LguI GCTCTTC 1 cut(s) 1146
LmnI GCTCC 3 cut(s) 497, 1148, 1414
Lsp1109I GCAGC 4 cut(s) 1492, 1981, 2009, 2235
LweI GCATC 6 cut(s) 265, 838, 1547, 1981, 2267, 2500
MaeI CTAG 4 cut(s) 746, 956, 1304, 1418
MaeII ACGT 4 cut(s) 135, 1330, 2140, 2572
MaeIII GTNAC 5 cut(s) 584, 1068, 1600, 1937, 2269
MalI GATC 5 cut(s) 875, 930, 1642, 1898, 2578
MbiI CCGCTC 1 cut(s) 1887
MboI GATC 5 cut(s) 873, 928, 1640, 1896, 2576
MfeI CAATTG 1 cut(s) 2375
MflI RGATCY 3 cut(s) 873, 1640, 1896
MhlI GDGCHC 6 cut(s) 81, 1026, 1186, 1324, 1411, 2182
MlsI TGGCCA 1 cut(s) 1829
MluNI TGGCCA 1 cut(s) 1829
MlyI GAGTC 4 cut(s) 25, 863, 1597, 1806
MmeI TCCRAC 3 cut(s) 1284, 2392, 2487
Mox20I TGGCCA 1 cut(s) 1829
Mph1103I ATGCAT 2 cut(s) 473, 2404
MroXI GAANNNNTTC 1 cut(s) 2061
MscI TGGCCA 1 cut(s) 1829
MseI TTAA 4 cut(s) 212, 974, 1901, 2285
MslI CAYNNNNRTG 1 cut(s) 582
Msp20I TGGCCA 1 cut(s) 1829
MspA1I CMGCKG 4 cut(s) 783, 871, 1985, 2027
MspCI CTTAAG 1 cut(s) 1900
MspI CCGG 1 cut(s) 47
MspR9I CCNGG 7 cut(s) 47, 439, 1146, 1158, 1413, 1715, 2389
MunI CAATTG 1 cut(s) 2375
MvaI CCWGG 6 cut(s) 439, 1146, 1158, 1413, 1715, 2389
NciI CCSGG 1 cut(s) 47
NcoI CCATGG 1 cut(s) 924
NdeI CATATG 1 cut(s) 2496
NdeII GATC 5 cut(s) 873, 928, 1640, 1896, 2576
NmeAIII GCCGAG 1 cut(s) 134
NmuCI GTSAC 3 cut(s) 584, 1600, 1937
NsiI ATGCAT 2 cut(s) 473, 2404
NspI RCATGY 3 cut(s) 471, 581, 1499
NspV TTCGAA 1 cut(s) 28
PaeR7I CTCGAG 1 cut(s) 1352
PagI TCATGA 1 cut(s) 763
PciSI GCTCTTC 1 cut(s) 1146
PdmI GAANNNNTTC 1 cut(s) 2061
PflMI CCANNNNNTGG 1 cut(s) 1594
PfoI TCCNGGA 2 cut(s) 1144, 1156
PkrI GCNGC 6 cut(s) 403, 1507, 1996, 1999, 2026, 2250
PleI GAGTC 4 cut(s) 24, 862, 1597, 1806
PmaCI CACGTG 1 cut(s) 2141
PmlI CACGTG 1 cut(s) 2141
PpsI GAGTC 4 cut(s) 24, 862, 1597, 1806
Ppu21I YACGTR 1 cut(s) 2141
PpuMI RGGWCCY 1 cut(s) 1348
Psp5II RGGWCCY 1 cut(s) 1348
Psp6I CCWGG 6 cut(s) 437, 1144, 1156, 1411, 1713, 2387
PspCI CACGTG 1 cut(s) 2141
PspGI CCWGG 6 cut(s) 437, 1144, 1156, 1411, 1713, 2387
PspOMI GGGCCC 1 cut(s) 1320
PspPI GGNCC 6 cut(s) 667, 773, 1126, 1320, 1321, 1348
PspPPI RGGWCCY 1 cut(s) 1348
PstI CTGCAG 1 cut(s) 1999
PstNI CAGNNNCTG 2 cut(s) 2003, 2306
PsuI RGATCY 3 cut(s) 873, 1640, 1896
PvuII CAGCTG 2 cut(s) 783, 1985
RsaI GTAC 4 cut(s) 196, 1179, 1808, 2216
RsaNI GTAC 4 cut(s) 195, 1178, 1807, 2215
RseI CAYNNNNRTG 1 cut(s) 582
SalI GTCGAC 2 cut(s) 2315, 2437
SapI GCTCTTC 1 cut(s) 1146
SaqAI TTAA 4 cut(s) 212, 974, 1901, 2285
SatI GCNGC 6 cut(s) 402, 1506, 1995, 1998, 2025, 2249
Sau3AI GATC 5 cut(s) 873, 928, 1640, 1896, 2576
Sau96I GGNCC 6 cut(s) 667, 773, 1126, 1320, 1321, 1348
SchI GAGTC 4 cut(s) 25, 863, 1597, 1806
ScrFI CCNGG 7 cut(s) 47, 439, 1146, 1158, 1413, 1715, 2389
SduI GDGCHC 6 cut(s) 81, 1026, 1186, 1324, 1411, 2182
SfaNI GCATC 6 cut(s) 265, 838, 1547, 1981, 2267, 2500
SfcI CTRYAG 1 cut(s) 1995
Sfr274I CTCGAG 1 cut(s) 1352
SfuI TTCGAA 1 cut(s) 28
SinI GGWCC 3 cut(s) 667, 1126, 1348
SlaI CTCGAG 1 cut(s) 1352
SmiMI CAYNNNNRTG 1 cut(s) 582
SmlI CTYRAG 3 cut(s) 1352, 1900, 2464
SmoI CTYRAG 3 cut(s) 1352, 1900, 2464
SsiI CCGC 9 cut(s) 63, 126, 402, 851, 871, 1088, 1325, 1885, 2025
SspI AATATT 2 cut(s) 823, 1975
SspMI CTAG 4 cut(s) 746, 956, 1304, 1418
StyD4I CCNGG 7 cut(s) 45, 437, 1144, 1156, 1411, 1713, 2387
StyI CCWWGG 4 cut(s) 488, 924, 1280, 1437
TaiI ACGT 4 cut(s) 138, 1333, 2143, 2575
TaqII GACCGA 1 cut(s) 684
TatI WGTACW 1 cut(s) 2214
TauI GCSGC 2 cut(s) 404, 2027
Tru1I TTAA 4 cut(s) 212, 974, 1901, 2285
Tru9I TTAA 4 cut(s) 212, 974, 1901, 2285
TscAI CASTG 8 cut(s) 161, 589, 595, 628, 715, 1119, 1468, 2432
TseFI GTSAC 3 cut(s) 584, 1600, 1937
TseI GCWGC 4 cut(s) 1505, 1994, 1997, 2248
Tsp45I GTSAC 3 cut(s) 584, 1600, 1937
TspDTI ATGAA 8 cut(s) 925, 990, 1261, 1503, 1862, 2202, 2285, 2525
TspGWI ACGGA 1 cut(s) 2540
TspRI CASTG 8 cut(s) 161, 589, 595, 628, 715, 1119, 1468, 2432
Van91I CCANNNNNTGG 1 cut(s) 1594
Vha464I CTTAAG 1 cut(s) 1900
VpaK11BI GGWCC 3 cut(s) 667, 1126, 1348
XagI CCTNNNNNAGG 2 cut(s) 492, 1133
XapI RAATTY 1 cut(s) 2189
XbaI TCTAGA 1 cut(s) 1417
XceI RCATGY 3 cut(s) 471, 581, 1499
XhoI CTCGAG 1 cut(s) 1352
XmiI GTMKAC 3 cut(s) 2316, 2438, 2569
XmnI GAANNNNTTC 1 cut(s) 2061
XspI CTAG 4 cut(s) 746, 956, 1304, 1418
Zsp2I ATGCAT 2 cut(s) 473, 2404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.