Rh5DG361100

Nuclear cap-binding protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0007238
Physical Location & Seq
Forward (+)
53995762 .. 54009140
13379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG361100.1

Sequence Viewer

Length: 2466 bp
ATGTTTGACTCACTCCCTCCCTCTCTCTCTCTCTCTATATATATATATATATATCTATTTTTATATCTTCAGATTGGCTTGTTAAACTTGGAGAATGAGGATTTTATCAGGAAACTTGTGGAGAACACTCAAAGTAATTTTCAGGATGCCTTAGATACTGGAAATTGCAACAAGATTCGTATTTTGATGAGGTTCCTGACTGCTATGATGTGCAGTAAAGTTCTCCATCCCAGTTCGCTTGTGATTGTGTTTGAAACATTATTATCATCTGCCGCAACAACAGTTGATGAGGAGAAAGGGAATCCATCCTGGCAATCACGAGCTGACTTTTACATAACATGCATTTTATCCTGTCTCCCTTGGGGAGGAGCAGAACTGATTGAGCAAGTCCCTGAGGAAATTGAAAGAGTTATGGTTGGTGTAGAAGCTTATTTGAGCATAAGAAAGCATGTCAGTGACACTGGGTTGTCTTTTTTTGAGGCTGATGATGACAGTGCAAAAGTCTCTACTGATAAGGATTTTTTGGAAGATTTGTGGGACCGAATACAAGTTCTATCTAATAATGGATGGAAACTTGACAGTGTTCCAAGACCTCACTTATCATTTGAAGCACAGCTAGTCAATGGAAAGTCTCATGAGTTTGGCCCCATCAGCTGTCCTGACCAACCTGAACTGCCTTCAACGAGTTCCAATATTACTTATGGGAAACAAAAGCATGATGCGGAGTCAATTTATCCTCAGCGGATCCGAAGGCTGAATATATTTCCTGCAAATAAAACTGAGGATATGGAACCCATGGATCGCTTCATTGTGGAAGAGTATCTGCTAGATGTGCTTTTTTTCTTAAATGGCTGTCGAAAGGAATGTGCTTCATACATGGCTGGCCTACCTGTGCCCTTTAGATATGAGTATCTTATGGCAGAGACAATTTTCTCTCAGTTACTTCTGCTACCACAACCGCCTTTCAGGCCAACATATTACACACTGGTTATTATGGACCTTTGTAAGGCTCTTCCTGGAGCCTTTCCAGGAGTGGTTGCTGGTGCTGTACGGGCTCTTTTCGAGAAAATAGCTGATTTAGATATGGAATGTCGAACACGGCTAATCCTTTGGTTTTCTCACCACTTATCCAACTTTCAGTTCATCTGGCCTTGGGAGGAGTGGGCTTATGTCCTAGACCTGCCAAAGTGGGCCCCGCAACGTGTATTTGTTCAGGAGGTCCTCGAGAGAGAAGTTCGTTTGTCCTACTGGGAAAAAGTGAAGCAGAGTATTGAGAGTGCTCCTGGTCTAGAAGAGTTGCTTCCTCCCAAGGGGACACCAAACTTCAAGTTCAGTGTTGAAGAAAGCATGGAAGGAAATGAACAACATGCACTTGCTGCTGAACTCAGAAACATGGTAAAAGGAAAGGCATCTGCCCGTGAAATAATCTTGTGGATAGAGGAAAGTCTGTTTCCTGTCCATCGTATGGAAGTGACTCTAACTGTGGTTGTGCAAACTCTCCTCGACATTGGATCTAAAAGTTTCACTCATTTGATTACTGTATTGGAGAGATATGGTCAAGTCGTTGCAAAACTATGTGCTGACCAGGATAAGCAGGTCATGCTGATAACTGAGATTGATTCTTACTGGAAGAACAATGCTCAAATGACTGCTATTGCAATAGATAGGATGATGGGGTACCGACTCTTATCTAATCTGGCCATTGTCAGATGGGTCTTTTCTCCAGAAAATGTTGAGCAATTTCATTTATCAGACCGCTCATGGGAGATCTTAAGAAATGCAGTTGGCAAGACATATAACCGTGTATGTGACCTGAGGAAAGAGATTTTGTCCCTGAAAAAGAATATTGTATCAGCTGAAGATGCTGCAGCAACTGCAAAAGCAGAGTTAGTGGCCGCTGAATCAAAGCTCTCACTTATGGATGGAGAACCTGTTCTTGGGGAAAATCCTATGAGGTTGAAGCGTTTGAAATCCTATGCTGAGAAGGCAAAGGAGGAGGAGGTGTCTGCACGTGAATCTTTAGAGGCTAAGGAGGCTCTGCTTGCCCGAGCCCTTGATGAATTTGAGGCATTGTTTTTCTTATTGTACAAAAGCTTCGTGAATGTCTTGATGGAACGGCTGCCAGAGGCATCCAAAGTTGTTACATTGCAGGGATTAAAGTCGATTCATGCAGATTCTGTGTCAGTCGACCTTGAAGAATCATCTGCAATGGAGGTGGACGATGAGAATGGAAAATCTAAAAGTCAATTGAATGGTGCCAGGACAGGTAATGCATATAATGTTGGAGAAAAAGAGCAGTGGTGTCTGTCGACATTAGGCTACCTCAAAGCGTTCTCAAGGCAATATGCGTCTGAGATATGGCCTCATATGGAGAGGTTGGATGCTGAGGTCATAACGGAGAATGTTCATCCCCTTATACGAAAAGCAATCTACTGTGGTCTACGTCGATCAACTGATGGGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000339 GO:0000375 GO:0000377 GO:0000394 GO:0000398 GO:0000956 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005845 GO:0005846 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0022414 GO:0031047 GO:0031050 GO:0031053 GO:0031503 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033993 GO:0034470 GO:0034518 GO:0034613 GO:0034641 GO:0034655 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0097159 GO:0097305 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901698 GO:1901699 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 map03013 map03015 map03040
Pfam Domains
Protein Families
MIF4G MIF4G_like MIF4G_like_2

Protein Analysis

821

Amino Acids

93.56

Weight (kDa)

5.12

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIF4G PF02854 25 - 181 7.2e-21 MIF4G domain
MIF4G_like PF09088 299 - 424 2.1e-36 MIF4G like
MIF4G_like_2 PF09090 450 - 785 2.4e-32 MIF4G like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1188, 1585
Acc65I GGTACC 1 cut(s) 1677
AccB1I GGYRCC 2 cut(s) 1677, 2255
AccB7I CCANNNNNTGG 1 cut(s) 1465
AccBSI CCGCTC 1 cut(s) 1758
AccI GTMKAC 3 cut(s) 2187, 2309, 2440
AciI CCGC 7 cut(s) 273, 722, 742, 959, 1196, 1756, 1896
AclWI GGATC 4 cut(s) 739, 752, 807, 1519
AcoI YGGCCR 2 cut(s) 1698, 1893
AcsI RAATTY 1 cut(s) 2060
AcuI CTGAAG 2 cut(s) 53, 1878
AcvI CACGTG 1 cut(s) 2012
AfaI GTAC 3 cut(s) 1050, 1679, 2087
AfiI CCNNNNNNNGG 6 cut(s) 365, 1006, 1310, 1465, 1762, 1937
AflII CTTAAG 1 cut(s) 1771
AflIII ACRYGT 1 cut(s) 1201
AjnI CCWGG 6 cut(s) 308, 1015, 1027, 1282, 1584, 2258
AjuI GAANNNNNNNTTGG 4 cut(s) 1124, 1156, 1920, 1952
AloI GAACNNNNNNTCC 2 cut(s) 1917, 1949
AluBI AGCT 8 cut(s) 323, 428, 616, 654, 1073, 1856, 1909, 2094
AluI AGCT 8 cut(s) 323, 428, 616, 654, 1073, 1856, 1909, 2094
Alw21I GWGCWC 1 cut(s) 1282
Alw26I GTCTC 4 cut(s) 359, 508, 636, 917
AlwI GGATC 4 cut(s) 739, 752, 807, 1519
AlwNI CAGNNNCTG 2 cut(s) 1874, 2177
Ama87I CYCGRG 2 cut(s) 1223, 2046
AoxI GGCC 8 cut(s) 643, 883, 968, 1148, 1191, 1698, 1893, 2360
ApaI GGGCCC 1 cut(s) 1195
ApeKI GCWGC 4 cut(s) 1376, 1865, 1868, 2119
ApoI RAATTY 1 cut(s) 2060
Asp700I GAANNNNTTC 1 cut(s) 1932
Asp718I GGTACC 1 cut(s) 1677
AspS9I GGNCC 6 cut(s) 538, 644, 997, 1191, 1192, 1219
AsuHPI GGTGA 1 cut(s) 1112
AvaI CYCGRG 2 cut(s) 1223, 2046
AvaII GGWCC 3 cut(s) 538, 997, 1219
AxyI CCTNAGG 2 cut(s) 393, 1814
BaeGI GKGCMC 2 cut(s) 897, 1195
BalI TGGCCA 1 cut(s) 1700
BamHI GGATCC 1 cut(s) 744
BanI GGYRCC 2 cut(s) 1677, 2255
BanII GRGCYC 3 cut(s) 1057, 1195, 2053
BarI GAAGNNNNNNTAC 2 cut(s) 2078, 2110
BauI CACGAG 1 cut(s) 318
BbrPI CACGTG 1 cut(s) 2012
Bbv12I GWGCWC 1 cut(s) 1282
BbvCI CCTCAGC 2 cut(s) 738, 2385
BbvI GCAGC 4 cut(s) 1363, 1852, 1880, 2106
BceAI ACGGC 2 cut(s) 1115, 2132
BciT130I CCWGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
BcoDI GTCTC 4 cut(s) 359, 508, 636, 917
BfaI CTAG 4 cut(s) 617, 827, 1175, 1289
BfmI CTRYAG 1 cut(s) 1866
BfrI CTTAAG 1 cut(s) 1771
BfuAI ACCTGC 2 cut(s) 1188, 1585
BglI GCCNNNNNGGC 1 cut(s) 967
BglII AGATCT 1 cut(s) 1767
BisI GCNGC 6 cut(s) 273, 1377, 1866, 1869, 1896, 2120
BlsI GCNGC 6 cut(s) 274, 1378, 1867, 1870, 1897, 2121
Bme1390I CCNGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
Bme18I GGWCC 3 cut(s) 538, 997, 1219
BmeT110I CYCGRG 2 cut(s) 1223, 2046
BmgT120I GGNCC 6 cut(s) 538, 644, 997, 1191, 1192, 1219
BmrFI CCNGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
BmrI ACTGGG 3 cut(s) 225, 471, 1258
BmsI GCATC 6 cut(s) 136, 709, 1418, 1852, 2138, 2371
BmuI ACTGGG 3 cut(s) 225, 471, 1258
BpmI CTGGAG 2 cut(s) 1038, 1707
Bpu10I CCTNAGC 3 cut(s) 738, 2028, 2385
BpuEI CTTGAG 1 cut(s) 2320
BsaAI YACGTR 1 cut(s) 2012
BsaJI CCNNGG 4 cut(s) 359, 795, 1151, 1308
BsaXI ACNNNNNCTCC 4 cut(s) 1917, 1947, 1988, 2018
Bsc4I CCNNNNNNNGG 6 cut(s) 365, 1006, 1310, 1465, 1762, 1937
Bse1I ACTGG 6 cut(s) 163, 231, 466, 990, 1253, 1631
Bse21I CCTNAGG 2 cut(s) 393, 1814
Bse3DI GCAATG 2 cut(s) 2144, 2214
BseBI CCWGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
BseDI CCNNGG 4 cut(s) 359, 795, 1151, 1308
BseGI GGATG 9 cut(s) 151, 226, 305, 572, 1674, 1927, 2129, 2386, 2407
BseLI CCNNNNNNNGG 6 cut(s) 365, 1006, 1310, 1465, 1762, 1937
BseMI GCAATG 2 cut(s) 2144, 2214
BseNI ACTGG 6 cut(s) 163, 231, 466, 990, 1253, 1631
BseRI GAGGAG 6 cut(s) 305, 381, 1172, 1490, 2009, 2012
BseSI GKGCMC 2 cut(s) 897, 1195
BseXI GCAGC 4 cut(s) 1363, 1852, 1880, 2106
BsgI GTGCAG 2 cut(s) 232, 1992
BshFI GGCC 8 cut(s) 645, 885, 970, 1150, 1193, 1700, 1895, 2362
BshNI GGYRCC 2 cut(s) 1677, 2255
BsiHKAI GWGCWC 1 cut(s) 1282
BsiHKCI CYCGRG 2 cut(s) 1223, 2046
BslFI GGGAC 4 cut(s) 374, 551, 1327, 1816
BslI CCNNNNNNNGG 6 cut(s) 365, 1006, 1310, 1465, 1762, 1937
BsmAI GTCTC 4 cut(s) 359, 508, 636, 917
BsmFI GGGAC 4 cut(s) 374, 551, 1327, 1816
BsnI GGCC 8 cut(s) 645, 885, 970, 1150, 1193, 1700, 1895, 2362
BsoBI CYCGRG 2 cut(s) 1223, 2046
Bsp120I GGGCCC 1 cut(s) 1191
Bsp1286I GDGCHC 5 cut(s) 897, 1057, 1195, 1282, 2053
Bsp1407I TGTACA 1 cut(s) 2085
Bsp143I GATC 5 cut(s) 744, 799, 1511, 1767, 2447
Bsp19I CCATGG 1 cut(s) 795
BspACI CCGC 7 cut(s) 273, 722, 742, 959, 1196, 1756, 1896
BspANI GGCC 8 cut(s) 645, 885, 970, 1150, 1193, 1700, 1895, 2362
BspHI TCATGA 1 cut(s) 634
BspMAI CTGCAG 1 cut(s) 1870
BspMI ACCTGC 2 cut(s) 1188, 1585
BspPI GGATC 4 cut(s) 739, 752, 807, 1519
BspQI GCTCTTC 1 cut(s) 1017
BspT107I GGYRCC 2 cut(s) 1677, 2255
BspTI CTTAAG 1 cut(s) 1771
BsrBI CCGCTC 1 cut(s) 1758
BsrDI GCAATG 2 cut(s) 2144, 2214
BsrGI TGTACA 1 cut(s) 2085
BsrI ACTGG 6 cut(s) 163, 231, 466, 990, 1253, 1631
BssECI CCNNGG 4 cut(s) 359, 795, 1151, 1308
BssMI GATC 5 cut(s) 744, 799, 1511, 1767, 2447
BssSI CACGAG 1 cut(s) 318
BssT1I CCWWGG 4 cut(s) 359, 795, 1151, 1308
Bst2BI CACGAG 1 cut(s) 318
Bst2UI CCWGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
Bst4CI ACNGT 7 cut(s) 283, 494, 581, 1483, 1540, 1802, 2435
Bst6I CTCTTC 3 cut(s) 810, 1017, 1287
BstAFI CTTAAG 1 cut(s) 1771
BstAPI GCANNNNNTGC 3 cut(s) 1376, 1600, 1874
BstAUI TGTACA 1 cut(s) 2085
BstBAI YACGTR 1 cut(s) 2012
BstC8I GCNNGC 2 cut(s) 883, 2043
BstDSI CCRYGG 1 cut(s) 795
BstENI CCTNNNNNAGG 2 cut(s) 363, 1004
BstF5I GGATG 9 cut(s) 151, 226, 305, 572, 1674, 1927, 2129, 2386, 2407
BstKTI GATC 5 cut(s) 747, 802, 1514, 1770, 2450
BstMAI GTCTC 4 cut(s) 359, 508, 636, 917
BstMBI GATC 5 cut(s) 744, 799, 1511, 1767, 2447
BstNI CCWGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
BstNSI RCATGY 3 cut(s) 342, 452, 1370
BstSCI CCNGG 6 cut(s) 308, 1015, 1027, 1282, 1584, 2258
BstSFI CTRYAG 1 cut(s) 1866
BstSLI GKGCMC 2 cut(s) 897, 1195
BstV1I GCAGC 4 cut(s) 1363, 1852, 1880, 2106
BstX2I RGATCY 3 cut(s) 744, 1511, 1767
BstYI RGATCY 3 cut(s) 744, 1511, 1767
Bsu36I CCTNAGG 2 cut(s) 393, 1814
BsuRI GGCC 8 cut(s) 645, 885, 970, 1150, 1193, 1700, 1895, 2362
BtgI CCRYGG 1 cut(s) 795
BtsCI GGATG 9 cut(s) 151, 226, 305, 572, 1674, 1927, 2129, 2386, 2407
BtsI GCAGTG 1 cut(s) 2303
BtsIMutI CAGTG 7 cut(s) 459, 460, 499, 586, 983, 1339, 2303
BveI ACCTGC 2 cut(s) 1188, 1585
Cac8I GCNNGC 2 cut(s) 883, 2043
CaiI CAGNNNCTG 2 cut(s) 1874, 2177
CciI TCATGA 1 cut(s) 634
Cfr13I GGNCC 6 cut(s) 538, 644, 997, 1191, 1192, 1219
CseI GACGC 1 cut(s) 2337
Csp6I GTAC 3 cut(s) 1049, 1678, 2086
CspCI CAANNNNNGTGG 2 cut(s) 2196, 2231
CviQI GTAC 3 cut(s) 1049, 1678, 2086
DpnI GATC 5 cut(s) 746, 801, 1513, 1769, 2449
DpnII GATC 5 cut(s) 744, 799, 1511, 1767, 2447
EaeI YGGCCR 2 cut(s) 1698, 1893
Eam1104I CTCTTC 3 cut(s) 810, 1017, 1287
EarI CTCTTC 3 cut(s) 810, 1017, 1287
Eco130I CCWWGG 4 cut(s) 359, 795, 1151, 1308
Eco24I GRGCYC 3 cut(s) 1057, 1195, 2053
Eco47I GGWCC 3 cut(s) 538, 997, 1219
Eco57I CTGAAG 2 cut(s) 53, 1878
Eco72I CACGTG 1 cut(s) 2012
Eco81I CCTNAGG 2 cut(s) 393, 1814
Eco88I CYCGRG 2 cut(s) 1223, 2046
EcoNI CCTNNNNNAGG 2 cut(s) 363, 1004
EcoO109I RGGNCCY 2 cut(s) 1192, 1219
EcoRII CCWGG 6 cut(s) 308, 1015, 1027, 1282, 1584, 2258
EcoT14I CCWWGG 4 cut(s) 359, 795, 1151, 1308
EcoT22I ATGCAT 2 cut(s) 344, 2275
EcoT38I GRGCYC 3 cut(s) 1057, 1195, 2053
ErhI CCWWGG 4 cut(s) 359, 795, 1151, 1308
FalI AAGNNNNNCTT 2 cut(s) 1284, 1316
FaqI GGGAC 4 cut(s) 374, 551, 1327, 1816
FauI CCCGC 1 cut(s) 1203
FauNDI CATATG 1 cut(s) 2367
FblI GTMKAC 3 cut(s) 2187, 2309, 2440
Fnu4HI GCNGC 6 cut(s) 273, 1377, 1866, 1869, 1896, 2120
FokI GGATG 9 cut(s) 158, 213, 292, 579, 1681, 1934, 2116, 2393, 2394
FriOI GRGCYC 3 cut(s) 1057, 1195, 2053
Fsp4HI GCNGC 6 cut(s) 273, 1377, 1866, 1869, 1896, 2120
FspBI CTAG 4 cut(s) 617, 827, 1175, 1289
GluI GCNGC 6 cut(s) 273, 1377, 1866, 1869, 1896, 2120
GsuI CTGGAG 2 cut(s) 1038, 1707
HaeIII GGCC 8 cut(s) 645, 885, 970, 1150, 1193, 1700, 1895, 2362
HgaI GACGC 1 cut(s) 2337
HincII GTYRAC 2 cut(s) 2188, 2310
HindII GTYRAC 2 cut(s) 2188, 2310
HindIII AAGCTT 2 cut(s) 426, 2092
HphI GGTGA 1 cut(s) 1112
Hpy166II GTNNAC 4 cut(s) 2188, 2218, 2310, 2441
Hpy188I TCNGA 6 cut(s) 72, 749, 1388, 1709, 1753, 2353
Hpy8I GTNNAC 4 cut(s) 2188, 2218, 2310, 2441
Hpy99I CGWCG 1 cut(s) 2448
HpyAV CCTTC 4 cut(s) 687, 744, 1346, 1978
HpyCH4III ACNGT 7 cut(s) 283, 494, 581, 1483, 1540, 1802, 2435
HpyCH4IV ACGT 3 cut(s) 1201, 2011, 2443
HpySE526I ACGT 3 cut(s) 1201, 2011, 2443
KpnI GGTACC 1 cut(s) 1681
Kzo9I GATC 5 cut(s) 744, 799, 1511, 1767, 2447
LguI GCTCTTC 1 cut(s) 1017
LmnI GCTCC 3 cut(s) 368, 1019, 1285
Lsp1109I GCAGC 4 cut(s) 1363, 1852, 1880, 2106
LweI GCATC 6 cut(s) 136, 709, 1418, 1852, 2138, 2371
MaeI CTAG 4 cut(s) 617, 827, 1175, 1289
MaeII ACGT 3 cut(s) 1201, 2011, 2443
MaeIII GTNAC 5 cut(s) 455, 939, 1471, 1808, 2140
MalI GATC 5 cut(s) 746, 801, 1513, 1769, 2449
MbiI CCGCTC 1 cut(s) 1758
MboI GATC 5 cut(s) 744, 799, 1511, 1767, 2447
MboII GAAGA 9 cut(s) 59, 539, 827, 1004, 1304, 1352, 1642, 1871, 2207
MfeI CAATTG 1 cut(s) 2246
MflI RGATCY 3 cut(s) 744, 1511, 1767
MhlI GDGCHC 5 cut(s) 897, 1057, 1195, 1282, 2053
MlsI TGGCCA 1 cut(s) 1700
MluCI AATT 8 cut(s) 136, 163, 399, 729, 927, 1739, 2060, 2246
MluNI TGGCCA 1 cut(s) 1700
MlyI GAGTC 4 cut(s) 2, 734, 1468, 1677
MmeI TCCRAC 3 cut(s) 1155, 2263, 2358
Mox20I TGGCCA 1 cut(s) 1700
Mph1103I ATGCAT 2 cut(s) 344, 2275
MroXI GAANNNNTTC 1 cut(s) 1932
MscI TGGCCA 1 cut(s) 1700
MseI TTAA 4 cut(s) 83, 845, 1772, 2156
MslI CAYNNNNRTG 1 cut(s) 453
Msp20I TGGCCA 1 cut(s) 1700
MspA1I CMGCKG 4 cut(s) 654, 742, 1856, 1898
MspCI CTTAAG 1 cut(s) 1771
MspR9I CCNGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
MunI CAATTG 1 cut(s) 2246
MvaI CCWGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
NcoI CCATGG 1 cut(s) 795
NdeI CATATG 1 cut(s) 2367
NdeII GATC 5 cut(s) 744, 799, 1511, 1767, 2447
NmuCI GTSAC 3 cut(s) 455, 1471, 1808
NsiI ATGCAT 2 cut(s) 344, 2275
NspI RCATGY 3 cut(s) 342, 452, 1370
PaeR7I CTCGAG 1 cut(s) 1223
PagI TCATGA 1 cut(s) 634
PciSI GCTCTTC 1 cut(s) 1017
PdmI GAANNNNTTC 1 cut(s) 1932
PfeI GAWTC 8 cut(s) 175, 301, 1619, 1901, 2015, 2164, 2174, 2198
PflMI CCANNNNNTGG 1 cut(s) 1465
PfoI TCCNGGA 2 cut(s) 1015, 1027
PkrI GCNGC 6 cut(s) 274, 1378, 1867, 1870, 1897, 2121
PleI GAGTC 4 cut(s) 2, 733, 1468, 1677
PmaCI CACGTG 1 cut(s) 2012
PmlI CACGTG 1 cut(s) 2012
PpsI GAGTC 4 cut(s) 2, 733, 1468, 1677
Ppu21I YACGTR 1 cut(s) 2012
PpuMI RGGWCCY 1 cut(s) 1219
Psp5II RGGWCCY 1 cut(s) 1219
Psp6I CCWGG 6 cut(s) 308, 1015, 1027, 1282, 1584, 2258
PspCI CACGTG 1 cut(s) 2012
PspGI CCWGG 6 cut(s) 308, 1015, 1027, 1282, 1584, 2258
PspOMI GGGCCC 1 cut(s) 1191
PspPI GGNCC 6 cut(s) 538, 644, 997, 1191, 1192, 1219
PspPPI RGGWCCY 1 cut(s) 1219
PstI CTGCAG 1 cut(s) 1870
PstNI CAGNNNCTG 2 cut(s) 1874, 2177
PsuI RGATCY 3 cut(s) 744, 1511, 1767
PvuII CAGCTG 2 cut(s) 654, 1856
RsaI GTAC 3 cut(s) 1050, 1679, 2087
RsaNI GTAC 3 cut(s) 1049, 1678, 2086
RseI CAYNNNNRTG 1 cut(s) 453
SalI GTCGAC 2 cut(s) 2186, 2308
SapI GCTCTTC 1 cut(s) 1017
SaqAI TTAA 4 cut(s) 83, 845, 1772, 2156
SatI GCNGC 6 cut(s) 273, 1377, 1866, 1869, 1896, 2120
Sau3AI GATC 5 cut(s) 744, 799, 1511, 1767, 2447
Sau96I GGNCC 6 cut(s) 538, 644, 997, 1191, 1192, 1219
SchI GAGTC 4 cut(s) 2, 734, 1468, 1677
ScrFI CCNGG 6 cut(s) 310, 1017, 1029, 1284, 1586, 2260
SduI GDGCHC 5 cut(s) 897, 1057, 1195, 1282, 2053
SfaNI GCATC 6 cut(s) 136, 709, 1418, 1852, 2138, 2371
SfcI CTRYAG 1 cut(s) 1866
Sfr274I CTCGAG 1 cut(s) 1223
SinI GGWCC 3 cut(s) 538, 997, 1219
SlaI CTCGAG 1 cut(s) 1223
SmiMI CAYNNNNRTG 1 cut(s) 453
SmlI CTYRAG 3 cut(s) 1223, 1771, 2335
SmoI CTYRAG 3 cut(s) 1223, 1771, 2335
Sse9I AATT 8 cut(s) 136, 163, 399, 729, 927, 1739, 2060, 2246
SsiI CCGC 7 cut(s) 273, 722, 742, 959, 1196, 1756, 1896
SspI AATATT 2 cut(s) 694, 1846
SspMI CTAG 4 cut(s) 617, 827, 1175, 1289
StyD4I CCNGG 6 cut(s) 308, 1015, 1027, 1282, 1584, 2258
StyI CCWWGG 4 cut(s) 359, 795, 1151, 1308
TaaI ACNGT 7 cut(s) 283, 494, 581, 1483, 1540, 1802, 2435
TaiI ACGT 3 cut(s) 1204, 2014, 2446
TaqI TCGA 9 cut(s) 856, 1062, 1093, 1224, 1503, 2162, 2187, 2309, 2446
TaqII GACCGA 1 cut(s) 555
TasI AATT 8 cut(s) 136, 163, 399, 729, 927, 1739, 2060, 2246
TatI WGTACW 1 cut(s) 2085
TauI GCSGC 2 cut(s) 275, 1898
TfiI GAWTC 8 cut(s) 175, 301, 1619, 1901, 2015, 2164, 2174, 2198
Tru1I TTAA 4 cut(s) 83, 845, 1772, 2156
Tru9I TTAA 4 cut(s) 83, 845, 1772, 2156
TscAI CASTG 7 cut(s) 460, 466, 499, 586, 990, 1339, 2303
TseFI GTSAC 3 cut(s) 455, 1471, 1808
TseI GCWGC 4 cut(s) 1376, 1865, 1868, 2119
Tsp45I GTSAC 3 cut(s) 455, 1471, 1808
TspDTI ATGAA 8 cut(s) 796, 861, 1132, 1374, 1733, 2073, 2156, 2396
TspGWI ACGGA 1 cut(s) 2411
TspRI CASTG 7 cut(s) 460, 466, 499, 586, 990, 1339, 2303
Van91I CCANNNNNTGG 1 cut(s) 1465
Vha464I CTTAAG 1 cut(s) 1771
VpaK11BI GGWCC 3 cut(s) 538, 997, 1219
XagI CCTNNNNNAGG 2 cut(s) 363, 1004
XapI RAATTY 1 cut(s) 2060
XbaI TCTAGA 1 cut(s) 1288
XceI RCATGY 3 cut(s) 342, 452, 1370
XhoI CTCGAG 1 cut(s) 1223
XmiI GTMKAC 3 cut(s) 2187, 2309, 2440
XmnI GAANNNNTTC 1 cut(s) 1932
XspI CTAG 4 cut(s) 617, 827, 1175, 1289
Zsp2I ATGCAT 2 cut(s) 344, 2275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.