Rh5AG338100

Nuclear cap-binding protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0007238
Physical Location & Seq
Forward (+)
54711513 .. 54724964
13452 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG338100.1

Sequence Viewer

Length: 2673 bp
ATGAGTGGTTGGAAGAGTCTTCTTCTTCGAATCGGCGAAAGTTGCCCAGACTATGGCACCTCCGCCGACTTCAAAGAACACATTGTTCGTCTCTCTCCCCTCTATTTTTACTCAAACTCTCACAACAACCCTAATTTTTGCTTTATTCTTCTCAATTCGCAGGAAACTTGCTTTGGCGTGCTTCGCCGAGAATTAGAACACTCCGCCCACGACGTTTTGCAATTCCTTATCCAGTGTGCTGAACAGTTGCCTCACAAGATTCCTCTATACAGTACCGTGATTGGCTTGTTAAACTTGGAGAATGAGGATTTTATCAGGAAACTTGTGGAGAACACTCAAAGTAATTTTCAGGATGCCTTGGATACGGGAAATTGCAACAAGATTCGTATTTTGATGAGGTTCCTGACTGCTATGATGTGCAGTAAAGTTCTCCATCCCAGTTCGCTTGTGATTGTCTTTGAAACATTATTATCATCTGCCGCAACAACAGTTGATGAGGAGAAAGGGAATCCATCCTGGCAATCACGAGCTGACTTTTACATAACATGCATTTTATCCTGTCTCCCTTGGGGAGGAGCAGAACTGATTGAGCAAGTCCCTGAGGAAATTGAAAGAGTTATGGTTGGTGTAGAAGCTTATTTGAGCATAAGAAAGCATGTCAGTGACACTGGGTTGTCTTTTTTTGAGGCTGATGATGACAGTGCAAAAGTCTCTACTGATAAGGATTTTTTGGAAGATTTGTGGGACCGAATACAAGTTCTATCTAATAATGGATGGAAACTTGACAGTGTTCCAAGACCTCACTTATCATTTGAAGCACAGCTAGTCAATGGAAAGTCTCATGAGTTTGGCCCCATCAGCTGTCCTGACCAACCTGAACTGCCTTCAACGAGTTCCAATATTACTTATGGGAAACAAAAGCATGATGCGGAGTCAATTTATCCTCAGCGGATCCGAAGGCTGAATATATTTCCTGCAAATAAAACTGAGGATATGGAACCCATGGATCGCTTCATTGTGGAAGAGTATCTGCTAGATGTGCTTTTTTTCTTAAATGGCTGTCGAAAGGAATGTGCTTCATACATGGCTGGCCTACCTGTGCCCTTTAGATATGAGTATCTTATGGCAGAGACAATTTTCTCTCAGTTACTTCTGCTACCACAACCACCTTTCAGGCCAACATATTACACACTGGTTATTATGGACCTTTGTAAGGCTCTTCCTGGAGCCTTTCCAGGAGTGGTTGCTGGTGCTGTACGGGCTCTTTTCGAGAAAATAGCTGATTTAGATATGGAATGTCGAACACGGCTAATCCTTTGGTTTTCTCACCACTTATCCAACTTTCAGTTCATCTGGCCTTGGGAGGAGTGGGCTTATGTCTTAGACCTGCCAAAGTGGGCCCCGCAACGTGTATTTGTTCAGGAGGTCCTCGAGAGAGAAGTTCGTTTGTCCTACTGGGAAAAAGTGAAGCAGAGTATTGAGAGTGCTCCTGGTCTAGAAGAGTTGCTTCCTCCCAAGGGGACACCAAACTTCAAGTTCAGTGTTGAAGAAAGCATGGAAGGAAATGAACAACATGCACTTGCTGCTGAACTCAGAAACATGGTAAAAGGAAAGGCATCTGCCCGTGAAATAATCTTGTGGATAGAGGAAAGTCTGTTTCCTGTCCATGGTATGGAAGTGACTCTAACTGTGGTTGTGCAAACTCTCCTCGACATTGGATCTAAAAGTTTCACTCATTTGATTACTGTATTGGAGAGATATGGTCAAGTCATTGCAAAACTATGTGCTGACCAGGATAAGCAGGTCATGCTGATAACTGAGATTGATTCTTACTGGAAGAACAATGCTCAAATGACTGCTATTGCAATAGATAGGATGATGGGGTACCGACTCTTATCTAATCTGGCCATTGTCAGATGGGTCTTTTCTCCAGAAAACGTTGAGCAATTTCATTTATCAGACCGCTCATGGGAGATCTTAAGAAATGCAGTTGGCAAGACATATAACCGTGTATGTGACCTGAGGAAAGAGATTTTGTCCCTGAAAAAGAATATTGTATCAGCTGAAGATGCTGCAGCAACTGCAAAAGCAGAGTTAGTGGCCGCTGAATCAAAGCTCTCACTTATGGATGGAGAACCTGTTCTTGGGGAAAATCCTATGAGGTTGAAGCGTTTGAAATCCTATGCCGAGAAGGCAAAGGAGGAGGAGGTGTCTGCACGTGAATCTTTAGAGGCTAAGGAGGCTCTGCTTGCCCGAGCCCTTGATGAATTTGAGGCATTGTTTTTCTTTTTGTACAAAAGCTTCGTGAATGTCTTGATGGAACGGCTGCCAGAGGCATCCAAAGTTGTTACATTTCAGGGATTAAAGTCGATTCATGCAGATTCTGTGTCAGTCGACCTTGAAGAATCATCTGCAATGGAGGTGGACGATGAGAATGGAAAATCTAAAAGTCAATTGAATGGTGCCAGGACAGGTAATGCATATAATGTTGGAGAAAAAGAGCAGTGGTGTCTGTCGACATTAGGCTACCTCAAAGCGTTCTCAAGGCAATATGCGTCCGAGATATGGCCTCATATGGAGAGGTTGGATGCTGAGGTCATAACGGAGAATGTTCATCCCCTTATACGAAAAGCAATCTACTGTGGTCTACGTCGATCAACTGATGGGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000339 GO:0000375 GO:0000377 GO:0000394 GO:0000398 GO:0000956 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005845 GO:0005846 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0022414 GO:0031047 GO:0031050 GO:0031053 GO:0031503 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033993 GO:0034470 GO:0034518 GO:0034613 GO:0034641 GO:0034655 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0097159 GO:0097305 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901698 GO:1901699 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 map03013 map03015 map03040
Pfam Domains
Protein Families
MIF4G MIF4G_like MIF4G_like_2

Protein Analysis

890

Amino Acids

101.36

Weight (kDa)

5.22

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MIF4G PF02854 63 - 250 1.8e-29 MIF4G domain
MIF4G_like PF09088 368 - 493 2.3e-36 MIF4G like
MIF4G_like_2 PF09090 519 - 854 3.9e-33 MIF4G like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1395, 1792
Acc65I GGTACC 1 cut(s) 1884
AccB1I GGYRCC 3 cut(s) 56, 1884, 2462
AccB7I CCANNNNNTGG 2 cut(s) 53, 1672
AccBSI CCGCTC 1 cut(s) 1965
AccI GTMKAC 3 cut(s) 2394, 2516, 2647
AciI CCGC 8 cut(s) 63, 204, 480, 929, 949, 1403, 1963, 2103
AclI AACGTT 1 cut(s) 1938
AclWI GGATC 4 cut(s) 946, 959, 1014, 1726
AcoI YGGCCR 2 cut(s) 1905, 2100
AcsI RAATTY 1 cut(s) 2267
AcuI CTGAAG 1 cut(s) 2085
AcvI CACGTG 1 cut(s) 2219
AfaI GTAC 4 cut(s) 274, 1257, 1886, 2294
AfiI CCNNNNNNNGG 9 cut(s) 53, 572, 1213, 1517, 1667, 1672, 1969, 2144, 2565
AflII CTTAAG 1 cut(s) 1978
AflIII ACRYGT 1 cut(s) 1408
AjnI CCWGG 6 cut(s) 515, 1222, 1234, 1489, 1791, 2465
AjuI GAANNNNNNNTTGG 6 cut(s) 156, 188, 1331, 1363, 2127, 2159
AloI GAACNNNNNNTCC 2 cut(s) 2124, 2156
AluBI AGCT 8 cut(s) 530, 635, 823, 861, 1280, 2063, 2116, 2301
AluI AGCT 8 cut(s) 530, 635, 823, 861, 1280, 2063, 2116, 2301
Alw21I GWGCWC 1 cut(s) 1489
Alw26I GTCTC 5 cut(s) 95, 566, 715, 843, 1124
AlwI GGATC 4 cut(s) 946, 959, 1014, 1726
AlwNI CAGNNNCTG 2 cut(s) 2081, 2384
Ama87I CYCGRG 2 cut(s) 1430, 2253
AoxI GGCC 8 cut(s) 850, 1090, 1175, 1355, 1398, 1905, 2100, 2567
ApaI GGGCCC 1 cut(s) 1402
ApeKI GCWGC 4 cut(s) 1583, 2072, 2075, 2326
ApoI RAATTY 1 cut(s) 2267
Asp700I GAANNNNTTC 1 cut(s) 2139
Asp718I GGTACC 1 cut(s) 1884
AspS9I GGNCC 6 cut(s) 745, 851, 1204, 1398, 1399, 1426
AsuHPI GGTGA 1 cut(s) 1319
AsuII TTCGAA 1 cut(s) 28
AvaI CYCGRG 2 cut(s) 1430, 2253
AvaII GGWCC 3 cut(s) 745, 1204, 1426
AxyI CCTNAGG 2 cut(s) 600, 2021
BaeGI GKGCMC 2 cut(s) 1104, 1402
BalI TGGCCA 1 cut(s) 1907
BamHI GGATCC 1 cut(s) 951
BanI GGYRCC 3 cut(s) 56, 1884, 2462
BanII GRGCYC 3 cut(s) 1264, 1402, 2260
BarI GAAGNNNNNNTAC 2 cut(s) 2285, 2317
BauI CACGAG 1 cut(s) 525
BbrPI CACGTG 1 cut(s) 2219
BbsI GAAGAC 1 cut(s) 11
Bbv12I GWGCWC 1 cut(s) 1489
BbvCI CCTCAGC 2 cut(s) 945, 2592
BbvI GCAGC 4 cut(s) 1570, 2059, 2087, 2313
BccI CCATC 9 cut(s) 441, 520, 768, 863, 1873, 1911, 2123, 2311, 2657
BceAI ACGGC 2 cut(s) 1322, 2339
BciT130I CCWGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
BciVI GTATCC 1 cut(s) 355
BcoDI GTCTC 5 cut(s) 95, 566, 715, 843, 1124
BfaI CTAG 3 cut(s) 824, 1034, 1496
BfmI CTRYAG 1 cut(s) 2073
BfrI CTTAAG 1 cut(s) 1978
BfuAI ACCTGC 2 cut(s) 1395, 1792
BfuI GTATCC 1 cut(s) 355
BglI GCCNNNNNGGC 1 cut(s) 2192
BglII AGATCT 1 cut(s) 1974
BisI GCNGC 6 cut(s) 480, 1584, 2073, 2076, 2103, 2327
BlsI GCNGC 6 cut(s) 481, 1585, 2074, 2077, 2104, 2328
Bme1390I CCNGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
Bme18I GGWCC 3 cut(s) 745, 1204, 1426
BmeT110I CYCGRG 2 cut(s) 1430, 2253
BmgT120I GGNCC 6 cut(s) 745, 851, 1204, 1398, 1399, 1426
BmrFI CCNGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
BmrI ACTGGG 3 cut(s) 432, 678, 1465
BmsI GCATC 6 cut(s) 343, 916, 1625, 2059, 2345, 2578
BmuI ACTGGG 3 cut(s) 432, 678, 1465
BpiI GAAGAC 1 cut(s) 11
BpmI CTGGAG 2 cut(s) 1245, 1914
Bpu10I CCTNAGC 3 cut(s) 945, 2235, 2592
Bpu14I TTCGAA 1 cut(s) 28
BpuEI CTTGAG 1 cut(s) 2527
BsaAI YACGTR 1 cut(s) 2219
BsaJI CCNNGG 6 cut(s) 357, 566, 1002, 1358, 1515, 1666
BsaXI ACNNNNNCTCC 4 cut(s) 2124, 2154, 2195, 2225
Bsc4I CCNNNNNNNGG 9 cut(s) 53, 572, 1213, 1517, 1667, 1672, 1969, 2144, 2565
Bse1I ACTGG 6 cut(s) 232, 438, 673, 1197, 1460, 1838
Bse21I CCTNAGG 2 cut(s) 600, 2021
Bse3DI GCAATG 2 cut(s) 1770, 2421
BseBI CCWGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
BseDI CCNNGG 6 cut(s) 357, 566, 1002, 1358, 1515, 1666
BseGI GGATG 9 cut(s) 358, 433, 512, 779, 1881, 2134, 2336, 2593, 2614
BseLI CCNNNNNNNGG 9 cut(s) 53, 572, 1213, 1517, 1667, 1672, 1969, 2144, 2565
BseMI GCAATG 2 cut(s) 1770, 2421
BseMII CTCAG 8 cut(s) 591, 959, 978, 1157, 1606, 1809, 2012, 2583
BseNI ACTGG 6 cut(s) 232, 438, 673, 1197, 1460, 1838
BseRI GAGGAG 6 cut(s) 512, 588, 1379, 1697, 2216, 2219
BseSI GKGCMC 2 cut(s) 1104, 1402
BseXI GCAGC 4 cut(s) 1570, 2059, 2087, 2313
BsgI GTGCAG 2 cut(s) 439, 2199
BshFI GGCC 8 cut(s) 852, 1092, 1177, 1357, 1400, 1907, 2102, 2569
BshNI GGYRCC 3 cut(s) 56, 1884, 2462
BsiHKAI GWGCWC 1 cut(s) 1489
BsiHKCI CYCGRG 2 cut(s) 1430, 2253
BslFI GGGAC 4 cut(s) 581, 758, 1534, 2023
BslI CCNNNNNNNGG 9 cut(s) 53, 572, 1213, 1517, 1667, 1672, 1969, 2144, 2565
BsmAI GTCTC 5 cut(s) 95, 566, 715, 843, 1124
BsmBI CGTCTC 1 cut(s) 95
BsmFI GGGAC 4 cut(s) 581, 758, 1534, 2023
BsnI GGCC 8 cut(s) 852, 1092, 1177, 1357, 1400, 1907, 2102, 2569
BsoBI CYCGRG 2 cut(s) 1430, 2253
Bsp119I TTCGAA 1 cut(s) 28
Bsp120I GGGCCC 1 cut(s) 1398
Bsp1286I GDGCHC 5 cut(s) 1104, 1264, 1402, 1489, 2260
Bsp1407I TGTACA 1 cut(s) 2292
Bsp143I GATC 5 cut(s) 951, 1006, 1718, 1974, 2654
Bsp19I CCATGG 2 cut(s) 1002, 1666
BspACI CCGC 8 cut(s) 63, 204, 480, 929, 949, 1403, 1963, 2103
BspANI GGCC 8 cut(s) 852, 1092, 1177, 1357, 1400, 1907, 2102, 2569
BspCNI CTCAG 8 cut(s) 592, 958, 979, 1156, 1605, 1810, 2013, 2584
BspHI TCATGA 1 cut(s) 841
BspMAI CTGCAG 1 cut(s) 2077
BspMI ACCTGC 2 cut(s) 1395, 1792
BspPI GGATC 4 cut(s) 946, 959, 1014, 1726
BspQI GCTCTTC 1 cut(s) 1224
BspT104I TTCGAA 1 cut(s) 28
BspT107I GGYRCC 3 cut(s) 56, 1884, 2462
BspTI CTTAAG 1 cut(s) 1978
BsrBI CCGCTC 1 cut(s) 1965
BsrDI GCAATG 2 cut(s) 1770, 2421
BsrGI TGTACA 1 cut(s) 2292
BsrI ACTGG 6 cut(s) 232, 438, 673, 1197, 1460, 1838
BssECI CCNNGG 6 cut(s) 357, 566, 1002, 1358, 1515, 1666
BssMI GATC 5 cut(s) 951, 1006, 1718, 1974, 2654
BssSI CACGAG 1 cut(s) 525
BssT1I CCWWGG 6 cut(s) 357, 566, 1002, 1358, 1515, 1666
Bst2BI CACGAG 1 cut(s) 525
Bst2UI CCWGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
Bst6I CTCTTC 4 cut(s) 8, 1017, 1224, 1494
BstAFI CTTAAG 1 cut(s) 1978
BstAPI GCANNNNNTGC 3 cut(s) 1583, 1807, 2081
BstAUI TGTACA 1 cut(s) 2292
BstBAI YACGTR 1 cut(s) 2219
BstBI TTCGAA 1 cut(s) 28
BstC8I GCNNGC 3 cut(s) 179, 1090, 2250
BstDSI CCRYGG 2 cut(s) 1002, 1666
BstENI CCTNNNNNAGG 2 cut(s) 570, 1211
BstF5I GGATG 9 cut(s) 358, 433, 512, 779, 1881, 2134, 2336, 2593, 2614
BstKTI GATC 5 cut(s) 954, 1009, 1721, 1977, 2657
BstMAI GTCTC 5 cut(s) 95, 566, 715, 843, 1124
BstMBI GATC 5 cut(s) 951, 1006, 1718, 1974, 2654
BstNI CCWGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
BstNSI RCATGY 3 cut(s) 549, 659, 1577
BstSCI CCNGG 6 cut(s) 515, 1222, 1234, 1489, 1791, 2465
BstSFI CTRYAG 1 cut(s) 2073
BstSLI GKGCMC 2 cut(s) 1104, 1402
BstV1I GCAGC 4 cut(s) 1570, 2059, 2087, 2313
BstV2I GAAGAC 1 cut(s) 11
BstX2I RGATCY 3 cut(s) 951, 1718, 1974
BstYI RGATCY 3 cut(s) 951, 1718, 1974
Bsu36I CCTNAGG 2 cut(s) 600, 2021
BsuI GTATCC 1 cut(s) 355
BsuRI GGCC 8 cut(s) 852, 1092, 1177, 1357, 1400, 1907, 2102, 2569
BtgI CCRYGG 2 cut(s) 1002, 1666
BtsCI GGATG 9 cut(s) 358, 433, 512, 779, 1881, 2134, 2336, 2593, 2614
BtsI GCAGTG 1 cut(s) 2510
BtsIMutI CAGTG 8 cut(s) 239, 666, 667, 706, 793, 1190, 1546, 2510
BveI ACCTGC 2 cut(s) 1395, 1792
Cac8I GCNNGC 3 cut(s) 179, 1090, 2250
CaiI CAGNNNCTG 2 cut(s) 2081, 2384
CciI TCATGA 1 cut(s) 841
Cfr13I GGNCC 6 cut(s) 745, 851, 1204, 1398, 1399, 1426
CseI GACGC 1 cut(s) 2544
Csp6I GTAC 4 cut(s) 273, 1256, 1885, 2293
CspCI CAANNNNNGTGG 2 cut(s) 2403, 2438
CviQI GTAC 4 cut(s) 273, 1256, 1885, 2293
DpnI GATC 5 cut(s) 953, 1008, 1720, 1976, 2656
DpnII GATC 5 cut(s) 951, 1006, 1718, 1974, 2654
EaeI YGGCCR 2 cut(s) 1905, 2100
Eam1104I CTCTTC 4 cut(s) 8, 1017, 1224, 1494
EarI CTCTTC 4 cut(s) 8, 1017, 1224, 1494
EciI GGCGGA 2 cut(s) 52, 193
Eco130I CCWWGG 6 cut(s) 357, 566, 1002, 1358, 1515, 1666
Eco24I GRGCYC 3 cut(s) 1264, 1402, 2260
Eco47I GGWCC 3 cut(s) 745, 1204, 1426
Eco57I CTGAAG 1 cut(s) 2085
Eco72I CACGTG 1 cut(s) 2219
Eco81I CCTNAGG 2 cut(s) 600, 2021
Eco88I CYCGRG 2 cut(s) 1430, 2253
EcoNI CCTNNNNNAGG 2 cut(s) 570, 1211
EcoO109I RGGNCCY 2 cut(s) 1399, 1426
EcoRII CCWGG 6 cut(s) 515, 1222, 1234, 1489, 1791, 2465
EcoT14I CCWWGG 6 cut(s) 357, 566, 1002, 1358, 1515, 1666
EcoT22I ATGCAT 2 cut(s) 551, 2482
EcoT38I GRGCYC 3 cut(s) 1264, 1402, 2260
ErhI CCWWGG 6 cut(s) 357, 566, 1002, 1358, 1515, 1666
Esp3I CGTCTC 1 cut(s) 95
FalI AAGNNNNNCTT 2 cut(s) 1491, 1523
FaqI GGGAC 4 cut(s) 581, 758, 1534, 2023
FauI CCCGC 1 cut(s) 1410
FauNDI CATATG 1 cut(s) 2574
FblI GTMKAC 3 cut(s) 2394, 2516, 2647
Fnu4HI GCNGC 6 cut(s) 480, 1584, 2073, 2076, 2103, 2327
FokI GGATG 9 cut(s) 365, 420, 499, 786, 1888, 2141, 2323, 2600, 2601
FriOI GRGCYC 3 cut(s) 1264, 1402, 2260
Fsp4HI GCNGC 6 cut(s) 480, 1584, 2073, 2076, 2103, 2327
FspBI CTAG 3 cut(s) 824, 1034, 1496
GluI GCNGC 6 cut(s) 480, 1584, 2073, 2076, 2103, 2327
GsuI CTGGAG 2 cut(s) 1245, 1914
HaeIII GGCC 8 cut(s) 852, 1092, 1177, 1357, 1400, 1907, 2102, 2569
HgaI GACGC 1 cut(s) 2544
HincII GTYRAC 2 cut(s) 2395, 2517
HindII GTYRAC 2 cut(s) 2395, 2517
HindIII AAGCTT 2 cut(s) 633, 2299
HphI GGTGA 1 cut(s) 1319
Hpy166II GTNNAC 4 cut(s) 2395, 2425, 2517, 2648
Hpy188I TCNGA 5 cut(s) 956, 1595, 1916, 1960, 2560
Hpy8I GTNNAC 4 cut(s) 2395, 2425, 2517, 2648
Hpy99I CGWCG 2 cut(s) 215, 2655
HpyAV CCTTC 4 cut(s) 894, 951, 1553, 2185
HpyCH4IV ACGT 5 cut(s) 213, 1408, 1938, 2218, 2650
HpySE526I ACGT 5 cut(s) 213, 1408, 1938, 2218, 2650
KpnI GGTACC 1 cut(s) 1888
Kzo9I GATC 5 cut(s) 951, 1006, 1718, 1974, 2654
LguI GCTCTTC 1 cut(s) 1224
LmnI GCTCC 3 cut(s) 575, 1226, 1492
Lsp1109I GCAGC 4 cut(s) 1570, 2059, 2087, 2313
LweI GCATC 6 cut(s) 343, 916, 1625, 2059, 2345, 2578
MaeI CTAG 3 cut(s) 824, 1034, 1496
MaeII ACGT 5 cut(s) 213, 1408, 1938, 2218, 2650
MaeIII GTNAC 5 cut(s) 662, 1146, 1678, 2015, 2347
MalI GATC 5 cut(s) 953, 1008, 1720, 1976, 2656
MbiI CCGCTC 1 cut(s) 1965
MboI GATC 5 cut(s) 951, 1006, 1718, 1974, 2654
MfeI CAATTG 1 cut(s) 2453
MflI RGATCY 3 cut(s) 951, 1718, 1974
MhlI GDGCHC 5 cut(s) 1104, 1264, 1402, 1489, 2260
MlsI TGGCCA 1 cut(s) 1907
MluNI TGGCCA 1 cut(s) 1907
MlyI GAGTC 4 cut(s) 25, 941, 1675, 1884
MmeI TCCRAC 3 cut(s) 1362, 2470, 2565
Mox20I TGGCCA 1 cut(s) 1907
Mph1103I ATGCAT 2 cut(s) 551, 2482
MroXI GAANNNNTTC 1 cut(s) 2139
MscI TGGCCA 1 cut(s) 1907
MseI TTAA 4 cut(s) 290, 1052, 1979, 2363
MslI CAYNNNNRTG 1 cut(s) 660
Msp20I TGGCCA 1 cut(s) 1907
MspA1I CMGCKG 4 cut(s) 861, 949, 2063, 2105
MspCI CTTAAG 1 cut(s) 1978
MspR9I CCNGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
MunI CAATTG 1 cut(s) 2453
MvaI CCWGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
NcoI CCATGG 2 cut(s) 1002, 1666
NdeI CATATG 1 cut(s) 2574
NdeII GATC 5 cut(s) 951, 1006, 1718, 1974, 2654
NmeAIII GCCGAG 2 cut(s) 212, 2212
NmuCI GTSAC 3 cut(s) 662, 1678, 2015
NsiI ATGCAT 2 cut(s) 551, 2482
NspI RCATGY 3 cut(s) 549, 659, 1577
NspV TTCGAA 1 cut(s) 28
PaeR7I CTCGAG 1 cut(s) 1430
PagI TCATGA 1 cut(s) 841
PciSI GCTCTTC 1 cut(s) 1224
PdmI GAANNNNTTC 1 cut(s) 2139
PflMI CCANNNNNTGG 2 cut(s) 53, 1672
PfoI TCCNGGA 2 cut(s) 1222, 1234
PkrI GCNGC 6 cut(s) 481, 1585, 2074, 2077, 2104, 2328
PleI GAGTC 4 cut(s) 24, 940, 1675, 1884
PmaCI CACGTG 1 cut(s) 2219
PmlI CACGTG 1 cut(s) 2219
PpsI GAGTC 4 cut(s) 24, 940, 1675, 1884
Ppu21I YACGTR 1 cut(s) 2219
PpuMI RGGWCCY 1 cut(s) 1426
Psp1406I AACGTT 1 cut(s) 1938
Psp5II RGGWCCY 1 cut(s) 1426
Psp6I CCWGG 6 cut(s) 515, 1222, 1234, 1489, 1791, 2465
PspCI CACGTG 1 cut(s) 2219
PspGI CCWGG 6 cut(s) 515, 1222, 1234, 1489, 1791, 2465
PspOMI GGGCCC 1 cut(s) 1398
PspPI GGNCC 6 cut(s) 745, 851, 1204, 1398, 1399, 1426
PspPPI RGGWCCY 1 cut(s) 1426
PstI CTGCAG 1 cut(s) 2077
PstNI CAGNNNCTG 2 cut(s) 2081, 2384
PsuI RGATCY 3 cut(s) 951, 1718, 1974
PvuII CAGCTG 2 cut(s) 861, 2063
RsaI GTAC 4 cut(s) 274, 1257, 1886, 2294
RsaNI GTAC 4 cut(s) 273, 1256, 1885, 2293
RseI CAYNNNNRTG 1 cut(s) 660
SalI GTCGAC 2 cut(s) 2393, 2515
SapI GCTCTTC 1 cut(s) 1224
SaqAI TTAA 4 cut(s) 290, 1052, 1979, 2363
SatI GCNGC 6 cut(s) 480, 1584, 2073, 2076, 2103, 2327
Sau3AI GATC 5 cut(s) 951, 1006, 1718, 1974, 2654
Sau96I GGNCC 6 cut(s) 745, 851, 1204, 1398, 1399, 1426
SchI GAGTC 4 cut(s) 25, 941, 1675, 1884
ScrFI CCNGG 6 cut(s) 517, 1224, 1236, 1491, 1793, 2467
SduI GDGCHC 5 cut(s) 1104, 1264, 1402, 1489, 2260
SfaNI GCATC 6 cut(s) 343, 916, 1625, 2059, 2345, 2578
SfcI CTRYAG 1 cut(s) 2073
Sfr274I CTCGAG 1 cut(s) 1430
SfuI TTCGAA 1 cut(s) 28
SinI GGWCC 3 cut(s) 745, 1204, 1426
SlaI CTCGAG 1 cut(s) 1430
SmiMI CAYNNNNRTG 1 cut(s) 660
SmlI CTYRAG 3 cut(s) 1430, 1978, 2542
SmoI CTYRAG 3 cut(s) 1430, 1978, 2542
SsiI CCGC 8 cut(s) 63, 204, 480, 929, 949, 1403, 1963, 2103
SspI AATATT 2 cut(s) 901, 2053
SspMI CTAG 3 cut(s) 824, 1034, 1496
StyD4I CCNGG 6 cut(s) 515, 1222, 1234, 1489, 1791, 2465
StyI CCWWGG 6 cut(s) 357, 566, 1002, 1358, 1515, 1666
TaiI ACGT 5 cut(s) 216, 1411, 1941, 2221, 2653
TaqII GACCGA 1 cut(s) 762
TatI WGTACW 1 cut(s) 2292
TauI GCSGC 2 cut(s) 482, 2105
Tru1I TTAA 4 cut(s) 290, 1052, 1979, 2363
Tru9I TTAA 4 cut(s) 290, 1052, 1979, 2363
TscAI CASTG 8 cut(s) 239, 667, 673, 706, 793, 1197, 1546, 2510
TseFI GTSAC 3 cut(s) 662, 1678, 2015
TseI GCWGC 4 cut(s) 1583, 2072, 2075, 2326
Tsp45I GTSAC 3 cut(s) 662, 1678, 2015
TspDTI ATGAA 8 cut(s) 1003, 1068, 1339, 1581, 1940, 2280, 2363, 2603
TspGWI ACGGA 1 cut(s) 2618
TspRI CASTG 8 cut(s) 239, 667, 673, 706, 793, 1197, 1546, 2510
Van91I CCANNNNNTGG 2 cut(s) 53, 1672
Vha464I CTTAAG 1 cut(s) 1978
VpaK11BI GGWCC 3 cut(s) 745, 1204, 1426
XagI CCTNNNNNAGG 2 cut(s) 570, 1211
XapI RAATTY 1 cut(s) 2267
XbaI TCTAGA 1 cut(s) 1495
XceI RCATGY 3 cut(s) 549, 659, 1577
XhoI CTCGAG 1 cut(s) 1430
XmiI GTMKAC 3 cut(s) 2394, 2516, 2647
XmnI GAANNNNTTC 1 cut(s) 2139
XspI CTAG 3 cut(s) 824, 1034, 1496
Zsp2I ATGCAT 2 cut(s) 551, 2482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.