Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004188

Physical Location & Seq

Genomic Coordinates Reverse (-)

22655534 .. 22664479

Gene Structure 8946 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g29650.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGAGGGCACTACTGAAAAGCAGAGAAACCGCCGAGCAACCACCCATGAAGAAGAAGAAGAAGAAGAGAAGCCGAAGGTGGTGGTGATTATGGGACCCACAGGTTCCGGAAAGTCCAAGCTCGCCATTGACTTGGCATCCCACTTTCCTGTCGAGGTAATCAACGCCGATTCAATGCAGGTCTACGATGGCCTCGACGTTCTCACCAACAAGGTCCCTCTCCACGAACAAAACGGAGTGCCTCATCATCTTCTGGGCACTGTAAGCCCGAATGTGGAGTTTACTGCTAAAGACTTCAGGGACTCTGCCATTCCGCTAATCGATGATATCTTGTCTCGCAACTGTGTTCCAGTCATAGTTGGGGGTACAAATTACTATATTCAGGCTCTTGTTAGTCCATTCCTTCTTGATGACACAGTAGAAGATATGGACGAAAGATTTTTAGGTGACCATCCGGGAGCTGGACAACAACAGACTGAGCTGGCATCTGAAGTAGACAATTCCAGTTATAGTTATGAGGATCTTAAAGTCATTGATCCAATTGCAGCAAACAGAATCCATCCAAATAATCACAGAAAAATTAATCAGTACCTTAGTATGTATGCTCACCATGGTGTTCGTCCTAGCAAAATTCTTCAGGGCAAGGCTGCCAAAAACTGGGGTCGAGTTGATAACTTCAGATACAATTGTTGTTTTTTATGCATGGATGCTTCTCTTCCTGTGCTGGACCGATTTGTGGATCAGAGAGTAGATTCCATGATAGATGCTGGACTCCTTGATGAAGTGTATGAAATTTATACTCGGAATGCTGATTATACTCGAGGTGTCCGGCAGGCCATTGGGGTTAGGGAGTTTGAAAGTTTTTTGAATTTGTACATAACTGAAGCTAGTGATGAAGGAAATCATTTGATAGATGGGTCAATGTCCTTCAAGTTAGTAGACCTGGCTGACAAGATGTTGAAAGAGAACATGAGGCTCATCCTGAATTCCTTGACTGACACTCAACCCAAAGCTGTGCTAAAAGAAGCTATTGAGAAAGTAAAACTGAACACCAGAAGACTAGTTCGTCGTCAGAAACGAAGGATAAATCGACTGGATATGTTGTTTGGATGGAACATGCATTCCCTTGACGCAACCGAGTCCATTCTATGCCAATCAGATGATACATGGTATGCAGAGGTGGTTGGACCAGCTGTTGAATTGGTTAAATCTTTCCTTAATCAGGATCCAACTTTGGTGCCTGATTCGGTTACCCCAAATAGCACTGAAATGAATATGATACAGAGGGACTTATGGACTCAGTATACATGCAAGGCCTGTGGTGACAAGATCCTTAGAGGAGCACACGAGTGGGAACAACACAAGCAGGGTCGTGGACATCGGAAACGAATTTCTCGGCTTAAAAAGTCGCGAGAATATTTGTCTGTCGAGCAGCACAGTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009308 GO:0009451 GO:0009690 GO:0009691 GO:0009824 GO:0009987 GO:0010467 GO:0010817 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0034754 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:0090304 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

482

Amino Acids

54.75

Weight (kDa)

5.78

Isoelectric Point (pI)

37.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPPT	PF01715	60 - 359	1.8e-53	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27760
fragaria_vesca	FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650
malus_domestica	MD03G1136100.v1.1
prunus_persica	Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1
pyrus_communis	pycom03g09200
rosa_chinensis	RchiOBHm_Chr5g0055011
rosa_laevigata	RLG00000034956
rosa_multiflora	Rmu_sc0003653.1_g000029
rosa_roxburghii	Rroxscaffold_1G00025500
rosa_rugosa	Rorug05G0289900 Rorug05G0290000
rosa_samantha	Rh5AG360000 Rh5BG371000 Rh5CG393300 Rh5DG384800
rosa_wichuraiana	Rw5G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1065
Acc36I	ACCTGC	1 cut(s)	169
AccB1I	GGYRCC	1 cut(s)	1237
AccB7I	CCANNNNNTGG	1 cut(s)	657
AccI	GTMKAC	4 cut(s)	183, 495, 939, 1304
AccII	CGCG	1 cut(s)	1411
AccIII	TCCGGA	1 cut(s)	107
AciI	CCGC	2 cut(s)	31, 314
AclWI	GGATC	6 cut(s)	528, 530, 747, 1220, 1233, 1324
AcsI	RAATTY	5 cut(s)	630, 792, 868, 985, 1389
AcuI	CTGAAG	5 cut(s)	280, 510, 620, 661, 903
AfaI	GTAC	3 cut(s)	367, 590, 875
AfiI	CCNNNNNNNGG	5 cut(s)	274, 461, 657, 736, 1222
AgsI	TTSAA	6 cut(s)	174, 857, 868, 931, 961, 1199
AhlI	ACTAGT	1 cut(s)	1060
AjnI	CCWGG	1 cut(s)	942
AleI	CACNNNNGTG	2 cut(s)	612, 1348
AloI	GAACNNNNNNTCC	2 cut(s)	1106, 1138
AluBI	AGCT	7 cut(s)	121, 461, 481, 887, 1013, 1028, 1193
AluI	AGCT	7 cut(s)	121, 461, 481, 887, 1013, 1028, 1193
Alw21I	GWGCWC	1 cut(s)	1345
Alw26I	GTCTC	1 cut(s)	339
AlwI	GGATC	6 cut(s)	528, 530, 747, 1220, 1233, 1324
Ama87I	CYCGRG	1 cut(s)	819
Aor13HI	TCCGGA	1 cut(s)	107
AoxI	GGCC	3 cut(s)	190, 834, 1314
ApeKI	GCWGC	3 cut(s)	545, 647, 1432
ApoI	RAATTY	5 cut(s)	630, 792, 868, 985, 1389
AseI	ATTAAT	1 cut(s)	582
AspS9I	GGNCC	4 cut(s)	95, 214, 727, 1187
AsuC2I	CCSGG	1 cut(s)	456
AsuHPI	GGTGA	5 cut(s)	97, 196, 458, 599, 1334
AvaI	CYCGRG	1 cut(s)	819
AvaII	GGWCC	4 cut(s)	95, 214, 727, 1187
BaeGI	GKGCMC	2 cut(s)	11, 260
BaeI	ACNNNNGTAYC	2 cut(s)	673, 706
BamHI	GGATCC	1 cut(s)	1225
BanI	GGYRCC	1 cut(s)	1237
BauI	CACGAG	1 cut(s)	1346
BbsI	GAAGAC	1 cut(s)	1063
Bbv12I	GWGCWC	1 cut(s)	1345
BbvI	GCAGC	2 cut(s)	557, 634
BccI	CCATC	5 cut(s)	182, 459, 567, 908, 1104
BciT130I	CCWGG	1 cut(s)	944
BcnI	CCSGG	1 cut(s)	456
BcoDI	GTCTC	1 cut(s)	339
BcuI	ACTAGT	1 cut(s)	1060
BfaI	CTAG	3 cut(s)	624, 888, 1061
BfuAI	ACCTGC	1 cut(s)	169
BisI	GCNGC	3 cut(s)	546, 648, 1433
BlsI	GCNGC	3 cut(s)	547, 649, 1434
Bme1390I	CCNGG	2 cut(s)	456, 944
Bme18I	GGWCC	4 cut(s)	95, 214, 727, 1187
BmeT110I	CYCGRG	1 cut(s)	819
BmgT120I	GGNCC	4 cut(s)	95, 214, 727, 1187
BmiI	GGNNCC	6 cut(s)	96, 97, 106, 216, 1227, 1239
BmrFI	CCNGG	2 cut(s)	456, 944
BmrI	ACTGGG	1 cut(s)	667
BmsI	GCATC	4 cut(s)	146, 494, 697, 754
BmuI	ACTGGG	1 cut(s)	667
BpiI	GAAGAC	1 cut(s)	1063
BpuMI	CCSGG	1 cut(s)	456
Bsa29I	ATCGAT	1 cut(s)	321
BsaJI	CCNNGG	1 cut(s)	610
BsaWI	WCCGGW	1 cut(s)	107
Bsc4I	CCNNNNNNNGG	5 cut(s)	274, 461, 657, 736, 1222
Bse1I	ACTGG	4 cut(s)	350, 504, 662, 1098
BseAI	TCCGGA	1 cut(s)	107
BseBI	CCWGG	1 cut(s)	944
BseCI	ATCGAT	1 cut(s)	321
BseDI	CCNNGG	1 cut(s)	610
BseGI	GGATG	6 cut(s)	137, 451, 559, 712, 978, 1115
BseLI	CCNNNNNNNGG	5 cut(s)	274, 461, 657, 736, 1222
BseMII	CTCAG	2 cut(s)	468, 1313
BseNI	ACTGG	4 cut(s)	350, 504, 662, 1098
BseRI	GAGGAG	1 cut(s)	1353
BseSI	GKGCMC	2 cut(s)	11, 260
BseXI	GCAGC	2 cut(s)	557, 634
Bsh1236I	CGCG	1 cut(s)	1411
BshFI	GGCC	3 cut(s)	192, 836, 1316
BshNI	GGYRCC	1 cut(s)	1237
BshVI	ATCGAT	1 cut(s)	321
BsiHKAI	GWGCWC	1 cut(s)	1345
BsiHKCI	CYCGRG	1 cut(s)	819
BsiSI	CCGG	3 cut(s)	108, 455, 829
BslFI	GGGAC	4 cut(s)	108, 200, 314, 1301
BslI	CCNNNNNNNGG	5 cut(s)	274, 461, 657, 736, 1222
BsmAI	GTCTC	1 cut(s)	339
BsmFI	GGGAC	4 cut(s)	108, 200, 314, 1301
BsmI	GAATGC	2 cut(s)	811, 1120
BsnI	GGCC	3 cut(s)	192, 836, 1316
BsoBI	CYCGRG	1 cut(s)	819
Bsp1286I	GDGCHC	3 cut(s)	11, 260, 1345
Bsp13I	TCCGGA	1 cut(s)	107
Bsp1407I	TGTACA	1 cut(s)	873
Bsp143I	GATC	5 cut(s)	520, 535, 739, 1225, 1329
Bsp19I	CCATGG	1 cut(s)	610
Bsp68I	TCGCGA	1 cut(s)	1411
BspACI	CCGC	2 cut(s)	31, 314
BspANI	GGCC	3 cut(s)	192, 836, 1316
BspCNI	CTCAG	2 cut(s)	469, 1312
BspDI	ATCGAT	1 cut(s)	321
BspEI	TCCGGA	1 cut(s)	107
BspFNI	CGCG	1 cut(s)	1411
BspLI	GGNNCC	6 cut(s)	96, 97, 106, 216, 1227, 1239
BspMI	ACCTGC	1 cut(s)	169
BspPI	GGATC	6 cut(s)	528, 530, 747, 1220, 1233, 1324
BspT107I	GGYRCC	1 cut(s)	1237
BsrGI	TGTACA	1 cut(s)	873
BsrI	ACTGG	4 cut(s)	350, 504, 662, 1098
BssECI	CCNNGG	1 cut(s)	610
BssMI	GATC	5 cut(s)	520, 535, 739, 1225, 1329
BssNAI	GTATAC	1 cut(s)	1305
BssSI	CACGAG	1 cut(s)	1346
BssT1I	CCWWGG	1 cut(s)	610
Bst1107I	GTATAC	1 cut(s)	1305
Bst2BI	CACGAG	1 cut(s)	1346
Bst2UI	CCWGG	1 cut(s)	944
Bst4CI	ACNGT	4 cut(s)	262, 344, 418, 1439
Bst6I	CTCTTC	2 cut(s)	60, 720
BstAUI	TGTACA	1 cut(s)	873
BstC8I	GCNNGC	3 cut(s)	123, 483, 834
BstDEI	CTNAG	4 cut(s)	477, 593, 1299, 1334
BstDSI	CCRYGG	1 cut(s)	610
BstEII	GGTNACC	2 cut(s)	446, 1249
BstENI	CCTNNNNNAGG	1 cut(s)	1220
BstF5I	GGATG	6 cut(s)	137, 451, 559, 712, 978, 1115
BstFNI	CGCG	1 cut(s)	1411
BstKTI	GATC	5 cut(s)	523, 538, 742, 1228, 1332
BstMAI	GTCTC	1 cut(s)	339
BstMBI	GATC	5 cut(s)	520, 535, 739, 1225, 1329
BstMWI	GCNNNNNNNGC	1 cut(s)	264
BstNI	CCWGG	1 cut(s)	944
BstNSI	RCATGY	2 cut(s)	1120, 1311
BstPI	GGTNACC	2 cut(s)	446, 1249
BstSCI	CCNGG	2 cut(s)	454, 942
BstSLI	GKGCMC	2 cut(s)	11, 260
BstUI	CGCG	1 cut(s)	1411
BstV1I	GCAGC	2 cut(s)	557, 634
BstV2I	GAAGAC	1 cut(s)	1063
BstX2I	RGATCY	3 cut(s)	520, 1225, 1329
BstXI	CCANNNNNNTGG	1 cut(s)	133
BstYI	RGATCY	3 cut(s)	520, 1225, 1329
BstZ17I	GTATAC	1 cut(s)	1305
Bsu15I	ATCGAT	1 cut(s)	321
BsuRI	GGCC	3 cut(s)	192, 836, 1316
BsuTUI	ATCGAT	1 cut(s)	321
BtgI	CCRYGG	1 cut(s)	610
BtsCI	GGATG	6 cut(s)	137, 451, 559, 712, 978, 1115
BtsIMutI	CAGTG	2 cut(s)	258, 1263
BtuMI	TCGCGA	1 cut(s)	1411
BveI	ACCTGC	1 cut(s)	169
Cac8I	GCNNGC	3 cut(s)	123, 483, 834
Cfr13I	GGNCC	4 cut(s)	95, 214, 727, 1187
ClaI	ATCGAT	1 cut(s)	321
CseI	GACGC	1 cut(s)	1139
Csp6I	GTAC	3 cut(s)	366, 589, 874
CspCI	CAANNNNNGTGG	2 cut(s)	1300, 1335
CviAII	CATG	8 cut(s)	47, 611, 703, 757, 970, 1117, 1167, 1308
CviQI	GTAC	3 cut(s)	366, 589, 874
DdeI	CTNAG	4 cut(s)	477, 593, 1299, 1334
DpnI	GATC	5 cut(s)	522, 537, 741, 1227, 1331
DpnII	GATC	5 cut(s)	520, 535, 739, 1225, 1329
DrdI	GACNNNNNNGTC	1 cut(s)	1065
DseDI	GACNNNNNNGTC	1 cut(s)	1065
Eam1104I	CTCTTC	2 cut(s)	60, 720
EarI	CTCTTC	2 cut(s)	60, 720
Eco130I	CCWWGG	1 cut(s)	610
Eco147I	AGGCCT	1 cut(s)	1316
Eco32I	GATATC	1 cut(s)	328
Eco47I	GGWCC	4 cut(s)	95, 214, 727, 1187
Eco57I	CTGAAG	5 cut(s)	280, 510, 620, 661, 903
Eco88I	CYCGRG	1 cut(s)	819
Eco91I	GGTNACC	2 cut(s)	446, 1249
EcoNI	CCTNNNNNAGG	1 cut(s)	1220
EcoO109I	RGGNCCY	2 cut(s)	95, 214
EcoO65I	GGTNACC	2 cut(s)	446, 1249
EcoRI	GAATTC	1 cut(s)	985
EcoRII	CCWGG	1 cut(s)	942
EcoRV	GATATC	1 cut(s)	328
EcoT14I	CCWWGG	1 cut(s)	610
EcoT22I	ATGCAT	2 cut(s)	704, 1122
ErhI	CCWWGG	1 cut(s)	610
FaeI	CATG	8 cut(s)	50, 614, 706, 760, 973, 1120, 1170, 1311
FaqI	GGGAC	4 cut(s)	108, 200, 314, 1301
FatI	CATG	8 cut(s)	46, 610, 702, 756, 969, 1116, 1166, 1307
FblI	GTMKAC	4 cut(s)	183, 495, 939, 1304
Fnu4HI	GCNGC	3 cut(s)	546, 648, 1433
FokI	GGATG	6 cut(s)	124, 438, 546, 719, 965, 1122
Fsp4HI	GCNGC	3 cut(s)	546, 648, 1433
FspBI	CTAG	3 cut(s)	624, 888, 1061
GluI	GCNGC	3 cut(s)	546, 648, 1433
HaeIII	GGCC	3 cut(s)	192, 836, 1316
HapII	CCGG	3 cut(s)	108, 455, 829
HgaI	GACGC	1 cut(s)	1139
Hin1II	CATG	8 cut(s)	50, 614, 706, 760, 973, 1120, 1170, 1311
HinfI	GANTC	8 cut(s)	170, 302, 555, 752, 771, 1139, 1244, 1297
HpaII	CCGG	3 cut(s)	108, 455, 829
HphI	GGTGA	5 cut(s)	97, 196, 458, 599, 1334
Hpy166II	GTNNAC	6 cut(s)	184, 282, 496, 940, 1305, 1376
Hpy188I	TCNGA	7 cut(s)	490, 680, 744, 804, 1074, 1159, 1383
Hpy188III	TCNNGA	5 cut(s)	108, 407, 982, 1223, 1410
Hpy8I	GTNNAC	6 cut(s)	184, 282, 496, 940, 1305, 1376
Hpy99I	CGWCG	2 cut(s)	200, 1071
HpyAV	CCTTC	5 cut(s)	70, 413, 890, 937, 1074
HpyCH4III	ACNGT	4 cut(s)	262, 344, 418, 1439
HpyCH4IV	ACGT	1 cut(s)	198
HpyCH4V	TGCA	6 cut(s)	178, 545, 702, 1120, 1175, 1311
HpyF10VI	GCNNNNNNNGC	1 cut(s)	264
HpyF3I	CTNAG	4 cut(s)	477, 593, 1299, 1334
HpySE526I	ACGT	1 cut(s)	198
Hsp92II	CATG	8 cut(s)	50, 614, 706, 760, 973, 1120, 1170, 1311
KflI	GGGWCCC	1 cut(s)	95
Kpn2I	TCCGGA	1 cut(s)	107
Kzo9I	GATC	5 cut(s)	520, 535, 739, 1225, 1329
LmnI	GCTCC	2 cut(s)	458, 1340
Lsp1109I	GCAGC	2 cut(s)	557, 634
LweI	GCATC	4 cut(s)	146, 494, 697, 754
MaeI	CTAG	3 cut(s)	624, 888, 1061
MaeII	ACGT	1 cut(s)	198
MaeIII	GTNAC	3 cut(s)	446, 1249, 1322
MalI	GATC	5 cut(s)	522, 537, 741, 1227, 1331
MboI	GATC	5 cut(s)	520, 535, 739, 1225, 1329
MfeI	CAATTG	2 cut(s)	540, 685
MflI	RGATCY	3 cut(s)	520, 1225, 1329
MhlI	GDGCHC	3 cut(s)	11, 260, 1345
MlyI	GAGTC	4 cut(s)	296, 765, 1148, 1291
MmeI	TCCRAC	2 cut(s)	1165, 1253
Mph1103I	ATGCAT	2 cut(s)	704, 1122
MroI	TCCGGA	1 cut(s)	107
MseI	TTAA	5 cut(s)	525, 582, 1206, 1218, 1401
MslI	CAYNNNNRTG	3 cut(s)	612, 1268, 1348
MspA1I	CMGCKG	1 cut(s)	1193
MspI	CCGG	3 cut(s)	108, 455, 829
MspR9I	CCNGG	2 cut(s)	456, 944
MunI	CAATTG	2 cut(s)	540, 685
Mva1269I	GAATGC	2 cut(s)	811, 1120
MvaI	CCWGG	1 cut(s)	944
MvnI	CGCG	1 cut(s)	1411
MwoI	GCNNNNNNNGC	1 cut(s)	264
NciI	CCSGG	1 cut(s)	456
NcoI	CCATGG	1 cut(s)	610
NdeII	GATC	5 cut(s)	520, 535, 739, 1225, 1329
NlaIII	CATG	8 cut(s)	50, 614, 706, 760, 973, 1120, 1170, 1311
NlaIV	GGNNCC	6 cut(s)	96, 97, 106, 216, 1227, 1239
NmeAIII	GCCGAG	2 cut(s)	59, 1375
NmuCI	GTSAC	2 cut(s)	446, 1322
NruI	TCGCGA	1 cut(s)	1411
NsiI	ATGCAT	2 cut(s)	704, 1122
NspI	RCATGY	2 cut(s)	1120, 1311
OliI	CACNNNNGTG	2 cut(s)	612, 1348
PaeR7I	CTCGAG	1 cut(s)	819
PceI	AGGCCT	1 cut(s)	1316
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 1075
PctI	GAATGC	2 cut(s)	811, 1120
PfeI	GAWTC	4 cut(s)	170, 555, 752, 1244
PflMI	CCANNNNNTGG	1 cut(s)	657
PfoI	TCCNGGA	1 cut(s)	454
PkrI	GCNGC	3 cut(s)	547, 649, 1434
PleI	GAGTC	4 cut(s)	296, 765, 1147, 1291
PpsI	GAGTC	4 cut(s)	296, 765, 1147, 1291
PpuMI	RGGWCCY	2 cut(s)	95, 214
PshBI	ATTAAT	1 cut(s)	582
Psp5II	RGGWCCY	2 cut(s)	95, 214
Psp6I	CCWGG	1 cut(s)	942
PspEI	GGTNACC	2 cut(s)	446, 1249
PspGI	CCWGG	1 cut(s)	942
PspN4I	GGNNCC	6 cut(s)	96, 97, 106, 216, 1227, 1239
PspPI	GGNCC	4 cut(s)	95, 214, 727, 1187
PspPPI	RGGWCCY	2 cut(s)	95, 214
PspXI	VCTCGAGB	1 cut(s)	819
PsuI	RGATCY	3 cut(s)	520, 1225, 1329
PvuII	CAGCTG	1 cut(s)	1193
RruI	TCGCGA	1 cut(s)	1411
RsaI	GTAC	3 cut(s)	367, 590, 875
RsaNI	GTAC	3 cut(s)	366, 589, 874
RseI	CAYNNNNRTG	3 cut(s)	612, 1268, 1348
SaqAI	TTAA	5 cut(s)	525, 582, 1206, 1218, 1401
SatI	GCNGC	3 cut(s)	546, 648, 1433
Sau3AI	GATC	5 cut(s)	520, 535, 739, 1225, 1329
Sau96I	GGNCC	4 cut(s)	95, 214, 727, 1187
SchI	GAGTC	4 cut(s)	296, 765, 1148, 1291
ScrFI	CCNGG	2 cut(s)	456, 944
SduI	GDGCHC	3 cut(s)	11, 260, 1345
SfaNI	GCATC	4 cut(s)	146, 494, 697, 754
Sfr274I	CTCGAG	1 cut(s)	819
SinI	GGWCC	4 cut(s)	95, 214, 727, 1187
SlaI	CTCGAG	1 cut(s)	819
SmiMI	CAYNNNNRTG	3 cut(s)	612, 1268, 1348
SmlI	CTYRAG	1 cut(s)	819
SmoI	CTYRAG	1 cut(s)	819
SpeI	ACTAGT	1 cut(s)	1060
SseBI	AGGCCT	1 cut(s)	1316
SsiI	CCGC	2 cut(s)	31, 314
SspI	AATATT	1 cut(s)	1418
SspMI	CTAG	3 cut(s)	624, 888, 1061
StuI	AGGCCT	1 cut(s)	1316
StyD4I	CCNGG	2 cut(s)	454, 942
StyI	CCWWGG	1 cut(s)	610
TaaI	ACNGT	4 cut(s)	262, 344, 418, 1439
TaiI	ACGT	1 cut(s)	201
TaqI	TCGA	7 cut(s)	153, 195, 321, 664, 820, 1090, 1428
TaqII	GACCGA	1 cut(s)	744
TatI	WGTACW	1 cut(s)	873
TfiI	GAWTC	4 cut(s)	170, 555, 752, 1244
Tru1I	TTAA	5 cut(s)	525, 582, 1206, 1218, 1401
Tru9I	TTAA	5 cut(s)	525, 582, 1206, 1218, 1401
TscAI	CASTG	2 cut(s)	265, 1270
TseFI	GTSAC	2 cut(s)	446, 1322
TseI	GCWGC	3 cut(s)	545, 647, 1432
Tsp45I	GTSAC	2 cut(s)	446, 1322
TspDTI	ATGAA	5 cut(s)	63, 795, 804, 909, 1286
TspGWI	ACGGA	1 cut(s)	249
TspRI	CASTG	2 cut(s)	265, 1270
Van91I	CCANNNNNTGG	1 cut(s)	657
VpaK11BI	GGWCC	4 cut(s)	95, 214, 727, 1187
VspI	ATTAAT	1 cut(s)	582
XagI	CCTNNNNNAGG	1 cut(s)	1220
XapI	RAATTY	5 cut(s)	630, 792, 868, 985, 1389
XceI	RCATGY	2 cut(s)	1120, 1311
XcmI	CCANNNNNNNNNTGG	1 cut(s)	458
XhoI	CTCGAG	1 cut(s)	819
XmiI	GTMKAC	4 cut(s)	183, 495, 939, 1304
XspI	CTAG	3 cut(s)	624, 888, 1061
Zsp2I	ATGCAT	2 cut(s)	704, 1122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.