Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004188

Physical Location & Seq

Genomic Coordinates Reverse (-)

57782447 .. 57792519

Gene Structure 10073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ33206

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGAGGGTGGCGCCGCCGCCGCCGCTGCTGCTATTGAAACGCAGAGAAACCCAGGACGACCAGCCCATGAGGAAGAAGAAGAAGAAGAAGAGAAGCCGAAGGTGGTGGTCATTATGGGACCCACAGGTTCCGGAAAGTCCAGGCTCGCCATTGATTTGGCATCCCACTTTCCCGTCGAAGTAATCAACGCCGATTCAATGCAGGTTTACAATGGTTTGGACGTTCTCACCAACAAGGTTCCTCTCCACGATCAAAAGGGAGTGCCTCATCATCTTCTGGGGACTGTAAGCCCAAACCTGGAGTTTACTGCTAAAGACTTCAGGGACTCTGCCATTCCGCTGATCAATGACATCTTGTCTCGCAACCGCCTTCCAGTCATAGTTGGGGGTACAAATTACTATATTCAGGCTCTTGTTAGTCCATTCCTTCTTGACGACACAGTAGAAGATATGGAAGAAAGCTTTTTAGATGACTGTCCAGGAGTGGGACAACAACAGACTGAGCTGGCATTTGAAGTAGACAATTCCAGTTATAGTTATGACGATCTTAAAGTCATTGATCCAATTGCAGCAAACCGAATCCATCCAAATAATCACAGAAAAATTAATCAGTACCTTAGTATGTATGCTCACCATGGTGTTCTCCCTAGCAGAATTCTTCAGGGAAAGGCAGCCAAAAACTGGGGTCGAGTTGATAACTTCAGATACAATTGCTGTTTTATATGTGTGGATGCTTCTCTTCCTGTGCTGGACCGATTTGTGGATCAAAGAGTAGATTCCATGATAGATGCTGGACTCCTTGATGAAGTCTATGAAATTTTTTCTCGGAATGCAGATTATACTCGAGGTTTCCGGCAGGCCATTGGGGTTAGGGAGTTCGAAAGTTTTTTGAGTCTGTACATAACTGAAGCCAGTGACAAAGGAAATCATTTGATAGATGGGTCAATGTCCTTAAAGTCAGTAGACCTGGCTGATAAGATATTGAAAGAGAACATGAGGCTCATCCTGAATTCCTTGATTGACAGTCAACCCAACTCTGTGTTAAAAGAAGCTATTGAGAAAGTAAAACTGAACACCAGAAGACTAGTTCGCCGTCAGAAACGAAGGATAAATCGACTGGATACATTGTTCGGATGGAACATACATTCCCTTGATGCAACTGAGTCCATTTTATGCAAATCGGATGAAACATGGGCTGCAGAGGTTGTTGGACCAGCTGTTGACTTGATCAGATCTTTCCTTAATCAGGAAGCAACATTGGTGCCTAATTTGGATACCCCAAATAGCACTGAAATGAATATGATACAGAGGGACTTATGGACTCAGTATACATGCAAGGCCTGCGGTGACAGGATCCTTAGAGGAGCTCACGAGTGGGAACAACACAAGCAGGGTCGTGGACATCGGAAACGAGTTTCTCGGCTACAAAAGTCACAAAAATATTTGTCCGTCGAGCAGCACAGTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009308 GO:0009451 GO:0009690 GO:0009691 GO:0009824 GO:0009987 GO:0010467 GO:0010817 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0034754 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:0090304 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

489

Amino Acids

55.14

Weight (kDa)

5.73

Isoelectric Point (pI)

39.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPPT	PF01715	68 - 368	7.1e-52	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27760
fragaria_vesca	FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650
malus_domestica	MD03G1136100.v1.1
prunus_persica	Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1
pyrus_communis	pycom03g09200
rosa_chinensis	RchiOBHm_Chr5g0055011
rosa_laevigata	RLG00000034956
rosa_multiflora	Rmu_sc0003653.1_g000029
rosa_roxburghii	Rroxscaffold_1G00025500
rosa_rugosa	Rorug05G0289900 Rorug05G0290000
rosa_samantha	Rh5AG360000 Rh5BG371000 Rh5CG393300 Rh5DG384800
rosa_wichuraiana	Rw5G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	193
AccB1I	GGYRCC	2 cut(s)	11, 1261
AccB7I	CCANNNNNTGG	1 cut(s)	681
AccI	GTMKAC	3 cut(s)	519, 963, 1328
AccIII	TCCGGA	1 cut(s)	131
AciI	CCGC	7 cut(s)	15, 18, 21, 24, 338, 367, 1344
AclWI	GGATC	4 cut(s)	554, 771, 1348, 1361
AcsI	RAATTY	3 cut(s)	654, 816, 1009
AcuI	CTGAAG	4 cut(s)	304, 644, 685, 927
AcyI	GRCGYC	1 cut(s)	12
AfaI	GTAC	3 cut(s)	391, 614, 899
AfiI	CCNNNNNNNGG	5 cut(s)	298, 485, 681, 760, 1246
AgsI	TTSAA	4 cut(s)	38, 198, 515, 985
AhdI	GACNNNNNGTC	1 cut(s)	355
AhlI	ACTAGT	1 cut(s)	1084
AjnI	CCWGG	5 cut(s)	52, 140, 297, 478, 966
AleI	CACNNNNGTG	1 cut(s)	636
AloI	GAACNNNNNNTCC	4 cut(s)	1112, 1130, 1144, 1162
AluBI	AGCT	5 cut(s)	462, 505, 1052, 1217, 1367
AluI	AGCT	5 cut(s)	462, 505, 1052, 1217, 1367
Alw21I	GWGCWC	1 cut(s)	1369
Alw26I	GTCTC	1 cut(s)	363
AlwI	GGATC	4 cut(s)	554, 771, 1348, 1361
Ama87I	CYCGRG	1 cut(s)	843
Aor13HI	TCCGGA	1 cut(s)	131
AoxI	GGCC	2 cut(s)	858, 1338
ApeKI	GCWGC	6 cut(s)	26, 29, 569, 671, 1196, 1456
ApoI	RAATTY	3 cut(s)	654, 816, 1009
AseI	ATTAAT	1 cut(s)	606
AspLEI	GCGC	1 cut(s)	14
AspS9I	GGNCC	3 cut(s)	119, 751, 1211
AsuHPI	GGTGA	3 cut(s)	220, 623, 1358
AsuII	TTCGAA	1 cut(s)	879
AvaI	CYCGRG	1 cut(s)	843
AvaII	GGWCC	3 cut(s)	119, 751, 1211
BamHI	GGATCC	1 cut(s)	1353
BanI	GGYRCC	2 cut(s)	11, 1261
BanII	GRGCYC	1 cut(s)	1369
BauI	CACGAG	1 cut(s)	1370
BbsI	GAAGAC	1 cut(s)	1087
Bbv12I	GWGCWC	1 cut(s)	1369
BbvI	GCAGC	5 cut(s)	13, 16, 581, 683, 1183
BccI	CCATC	3 cut(s)	591, 932, 1128
BceAI	ACGGC	1 cut(s)	1077
BciT130I	CCWGG	5 cut(s)	54, 142, 299, 480, 968
BciVI	GTATCC	2 cut(s)	1114, 1267
BclI	TGATCA	2 cut(s)	342, 1227
BcoDI	GTCTC	1 cut(s)	363
BcuI	ACTAGT	1 cut(s)	1084
BfaI	CTAG	2 cut(s)	648, 1085
BfmI	CTRYAG	1 cut(s)	1197
BfoI	RGCGCY	1 cut(s)	15
BfuAI	ACCTGC	1 cut(s)	193
BfuI	GTATCC	2 cut(s)	1114, 1267
BglII	AGATCT	1 cut(s)	1232
Bme1390I	CCNGG	5 cut(s)	54, 142, 299, 480, 968
Bme18I	GGWCC	3 cut(s)	119, 751, 1211
BmeRI	GACNNNNNGTC	1 cut(s)	355
BmeT110I	CYCGRG	1 cut(s)	843
BmgT120I	GGNCC	3 cut(s)	119, 751, 1211
BmiI	GGNNCC	7 cut(s)	13, 120, 121, 130, 240, 1263, 1355
BmrFI	CCNGG	5 cut(s)	54, 142, 299, 480, 968
BmrI	ACTGGG	1 cut(s)	691
BmsI	GCATC	4 cut(s)	170, 721, 778, 1144
BmuI	ACTGGG	1 cut(s)	691
BpiI	GAAGAC	1 cut(s)	1087
BpmI	CTGGAG	1 cut(s)	320
Bpu14I	TTCGAA	1 cut(s)	879
BsaHI	GRCGYC	1 cut(s)	12
BsaJI	CCNNGG	2 cut(s)	52, 634
BsaWI	WCCGGW	1 cut(s)	131
Bsc4I	CCNNNNNNNGG	5 cut(s)	298, 485, 681, 760, 1246
Bse1I	ACTGG	5 cut(s)	374, 528, 686, 912, 1122
BseAI	TCCGGA	1 cut(s)	131
BseBI	CCWGG	5 cut(s)	54, 142, 299, 480, 968
BseDI	CCNNGG	2 cut(s)	52, 634
BseGI	GGATG	6 cut(s)	161, 583, 736, 1002, 1139, 1189
BseLI	CCNNNNNNNGG	5 cut(s)	298, 485, 681, 760, 1246
BseMII	CTCAG	3 cut(s)	492, 1152, 1337
BseNI	ACTGG	5 cut(s)	374, 528, 686, 912, 1122
BseRI	GAGGAG	1 cut(s)	1377
BseXI	GCAGC	5 cut(s)	13, 16, 581, 683, 1183
BshFI	GGCC	2 cut(s)	860, 1340
BshNI	GGYRCC	2 cut(s)	11, 1261
BsiHKAI	GWGCWC	1 cut(s)	1369
BsiHKCI	CYCGRG	1 cut(s)	843
BsiSI	CCGG	2 cut(s)	132, 853
BslFI	GGGAC	5 cut(s)	132, 295, 338, 501, 1325
BslI	CCNNNNNNNGG	5 cut(s)	298, 485, 681, 760, 1246
BsmAI	GTCTC	1 cut(s)	363
BsmFI	GGGAC	5 cut(s)	132, 295, 338, 501, 1325
BsmI	GAATGC	1 cut(s)	835
BsnI	GGCC	2 cut(s)	860, 1340
BsoBI	CYCGRG	1 cut(s)	843
Bsp119I	TTCGAA	1 cut(s)	879
Bsp1286I	GDGCHC	1 cut(s)	1369
Bsp13I	TCCGGA	1 cut(s)	131
Bsp1407I	TGTACA	1 cut(s)	897
Bsp143I	GATC	8 cut(s)	250, 342, 544, 559, 763, 1227, 1232, 1353
Bsp19I	CCATGG	1 cut(s)	634
BspACI	CCGC	7 cut(s)	15, 18, 21, 24, 338, 367, 1344
BspANI	GGCC	2 cut(s)	860, 1340
BspCNI	CTCAG	3 cut(s)	493, 1153, 1336
BspEI	TCCGGA	1 cut(s)	131
BspLI	GGNNCC	7 cut(s)	13, 120, 121, 130, 240, 1263, 1355
BspMAI	CTGCAG	1 cut(s)	1201
BspMI	ACCTGC	1 cut(s)	193
BspPI	GGATC	4 cut(s)	554, 771, 1348, 1361
BspT104I	TTCGAA	1 cut(s)	879
BspT107I	GGYRCC	2 cut(s)	11, 1261
BsrGI	TGTACA	1 cut(s)	897
BsrI	ACTGG	5 cut(s)	374, 528, 686, 912, 1122
BssECI	CCNNGG	2 cut(s)	52, 634
BssMI	GATC	8 cut(s)	250, 342, 544, 559, 763, 1227, 1232, 1353
BssNAI	GTATAC	1 cut(s)	1329
BssNI	GRCGYC	1 cut(s)	12
BssSI	CACGAG	1 cut(s)	1370
BssT1I	CCWWGG	1 cut(s)	634
Bst1107I	GTATAC	1 cut(s)	1329
Bst2BI	CACGAG	1 cut(s)	1370
Bst2UI	CCWGG	5 cut(s)	54, 142, 299, 480, 968
Bst4CI	ACNGT	5 cut(s)	286, 442, 476, 1025, 1463
Bst6I	CTCTTC	2 cut(s)	84, 744
BstACI	GRCGYC	1 cut(s)	12
BstAPI	GCANNNNNTGC	1 cut(s)	1341
BstAUI	TGTACA	1 cut(s)	897
BstBI	TTCGAA	1 cut(s)	879
BstC8I	GCNNGC	4 cut(s)	147, 507, 858, 1342
BstDEI	CTNAG	5 cut(s)	501, 617, 1161, 1323, 1358
BstDSI	CCRYGG	1 cut(s)	634
BstENI	CCTNNNNNAGG	1 cut(s)	1244
BstF5I	GGATG	6 cut(s)	161, 583, 736, 1002, 1139, 1189
BstH2I	RGCGCY	1 cut(s)	15
BstHHI	GCGC	1 cut(s)	14
BstKTI	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
BstMAI	GTCTC	1 cut(s)	363
BstMBI	GATC	8 cut(s)	250, 342, 544, 559, 763, 1227, 1232, 1353
BstMWI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1341
BstNI	CCWGG	5 cut(s)	54, 142, 299, 480, 968
BstNSI	RCATGY	1 cut(s)	1335
BstSCI	CCNGG	5 cut(s)	52, 140, 297, 478, 966
BstSFI	CTRYAG	1 cut(s)	1197
BstV1I	GCAGC	5 cut(s)	13, 16, 581, 683, 1183
BstV2I	GAAGAC	1 cut(s)	1087
BstX2I	RGATCY	2 cut(s)	1232, 1353
BstXI	CCANNNNNNTGG	1 cut(s)	157
BstYI	RGATCY	2 cut(s)	1232, 1353
BstZ17I	GTATAC	1 cut(s)	1329
BsuI	GTATCC	2 cut(s)	1114, 1267
BsuRI	GGCC	2 cut(s)	860, 1340
BtgI	CCRYGG	1 cut(s)	634
BtsCI	GGATG	6 cut(s)	161, 583, 736, 1002, 1139, 1189
BtsIMutI	CAGTG	2 cut(s)	919, 1287
BveI	ACCTGC	1 cut(s)	193
Cac8I	GCNNGC	4 cut(s)	147, 507, 858, 1342
CfoI	GCGC	1 cut(s)	14
Cfr13I	GGNCC	3 cut(s)	119, 751, 1211
Csp6I	GTAC	3 cut(s)	390, 613, 898
CviAII	CATG	6 cut(s)	68, 635, 781, 994, 1191, 1332
CviQI	GTAC	3 cut(s)	390, 613, 898
DdeI	CTNAG	5 cut(s)	501, 617, 1161, 1323, 1358
DinI	GGCGCC	1 cut(s)	13
DpnI	GATC	8 cut(s)	252, 344, 546, 561, 765, 1229, 1234, 1355
DpnII	GATC	8 cut(s)	250, 342, 544, 559, 763, 1227, 1232, 1353
DriI	GACNNNNNGTC	1 cut(s)	355
Eam1104I	CTCTTC	2 cut(s)	84, 744
Eam1105I	GACNNNNNGTC	1 cut(s)	355
EarI	CTCTTC	2 cut(s)	84, 744
Ecl136II	GAGCTC	1 cut(s)	1367
Eco130I	CCWWGG	1 cut(s)	634
Eco147I	AGGCCT	1 cut(s)	1340
Eco24I	GRGCYC	1 cut(s)	1369
Eco47I	GGWCC	3 cut(s)	119, 751, 1211
Eco53kI	GAGCTC	1 cut(s)	1367
Eco57I	CTGAAG	4 cut(s)	304, 644, 685, 927
Eco88I	CYCGRG	1 cut(s)	843
EcoICRI	GAGCTC	1 cut(s)	1367
EcoNI	CCTNNNNNAGG	1 cut(s)	1244
EcoO109I	RGGNCCY	1 cut(s)	119
EcoRI	GAATTC	2 cut(s)	654, 1009
EcoRII	CCWGG	5 cut(s)	52, 140, 297, 478, 966
EcoT14I	CCWWGG	1 cut(s)	634
EcoT38I	GRGCYC	1 cut(s)	1369
EgeI	GGCGCC	1 cut(s)	13
EheI	GGCGCC	1 cut(s)	13
ErhI	CCWWGG	1 cut(s)	634
FaeI	CATG	6 cut(s)	71, 638, 784, 997, 1194, 1335
FaqI	GGGAC	5 cut(s)	132, 295, 338, 501, 1325
FatI	CATG	6 cut(s)	67, 634, 780, 993, 1190, 1331
FbaI	TGATCA	2 cut(s)	342, 1227
FblI	GTMKAC	3 cut(s)	519, 963, 1328
FokI	GGATG	6 cut(s)	148, 570, 743, 989, 1146, 1196
FriOI	GRGCYC	1 cut(s)	1369
FspBI	CTAG	2 cut(s)	648, 1085
GlaI	GCGC	1 cut(s)	13
GsuI	CTGGAG	1 cut(s)	320
HaeII	RGCGCY	1 cut(s)	15
HaeIII	GGCC	2 cut(s)	860, 1340
HapII	CCGG	2 cut(s)	132, 853
HhaI	GCGC	1 cut(s)	14
Hin1I	GRCGYC	1 cut(s)	12
Hin1II	CATG	6 cut(s)	71, 638, 784, 997, 1194, 1335
Hin6I	GCGC	1 cut(s)	12
HinP1I	GCGC	1 cut(s)	12
HincII	GTYRAC	2 cut(s)	1028, 1222
HindII	GTYRAC	2 cut(s)	1028, 1222
HindIII	AAGCTT	1 cut(s)	460
HinfI	GANTC	8 cut(s)	194, 326, 579, 776, 795, 892, 1163, 1321
HpaII	CCGG	2 cut(s)	132, 853
HphI	GGTGA	3 cut(s)	220, 623, 1358
Hpy166II	GTNNAC	8 cut(s)	208, 306, 520, 964, 1028, 1222, 1329, 1400
Hpy188I	TCNGA	7 cut(s)	704, 828, 1098, 1133, 1183, 1232, 1407
Hpy188III	TCNNGA	5 cut(s)	132, 431, 1006, 1247, 1370
Hpy8I	GTNNAC	8 cut(s)	208, 306, 520, 964, 1028, 1222, 1329, 1400
Hpy99I	CGWCG	2 cut(s)	179, 1454
HpyAV	CCTTC	4 cut(s)	94, 380, 437, 1098
HpyCH4III	ACNGT	5 cut(s)	286, 442, 476, 1025, 1463
HpyCH4IV	ACGT	1 cut(s)	222
HpyCH4V	TGCA	7 cut(s)	202, 569, 833, 1157, 1176, 1199, 1335
HpyF10VI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1341
HpyF3I	CTNAG	5 cut(s)	501, 617, 1161, 1323, 1358
HpySE526I	ACGT	1 cut(s)	222
Hsp92I	GRCGYC	1 cut(s)	12
Hsp92II	CATG	6 cut(s)	71, 638, 784, 997, 1194, 1335
HspAI	GCGC	1 cut(s)	12
KasI	GGCGCC	1 cut(s)	11
KflI	GGGWCCC	1 cut(s)	119
Kpn2I	TCCGGA	1 cut(s)	131
Ksp22I	TGATCA	2 cut(s)	342, 1227
Kzo9I	GATC	8 cut(s)	250, 342, 544, 559, 763, 1227, 1232, 1353
LmnI	GCTCC	1 cut(s)	1364
Lsp1109I	GCAGC	5 cut(s)	13, 16, 581, 683, 1183
LweI	GCATC	4 cut(s)	170, 721, 778, 1144
MaeI	CTAG	2 cut(s)	648, 1085
MaeII	ACGT	1 cut(s)	222
MaeIII	GTNAC	3 cut(s)	914, 1346, 1431
MalI	GATC	8 cut(s)	252, 344, 546, 561, 765, 1229, 1234, 1355
MboI	GATC	8 cut(s)	250, 342, 544, 559, 763, 1227, 1232, 1353
MfeI	CAATTG	2 cut(s)	564, 709
MflI	RGATCY	2 cut(s)	1232, 1353
MhlI	GDGCHC	1 cut(s)	1369
MluCI	AATT	9 cut(s)	394, 523, 564, 603, 654, 709, 816, 1009, 1267
Mly113I	GGCGCC	1 cut(s)	12
MlyI	GAGTC	5 cut(s)	320, 789, 901, 1172, 1315
MmeI	TCCRAC	1 cut(s)	1189
MnlI	CCTC	8 cut(s)	64, 252, 276, 839, 990, 1195, 1302, 1355
MroI	TCCGGA	1 cut(s)	131
MseI	TTAA	5 cut(s)	549, 606, 953, 1043, 1242
MslI	CAYNNNNRTG	2 cut(s)	636, 1292
MspA1I	CMGCKG	3 cut(s)	26, 340, 1217
MspI	CCGG	2 cut(s)	132, 853
MspR9I	CCNGG	5 cut(s)	54, 142, 299, 480, 968
MunI	CAATTG	2 cut(s)	564, 709
Mva1269I	GAATGC	1 cut(s)	835
MvaI	CCWGG	5 cut(s)	54, 142, 299, 480, 968
MwoI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1341
NarI	GGCGCC	1 cut(s)	12
NcoI	CCATGG	1 cut(s)	634
NdeII	GATC	8 cut(s)	250, 342, 544, 559, 763, 1227, 1232, 1353
NlaIII	CATG	6 cut(s)	71, 638, 784, 997, 1194, 1335
NlaIV	GGNNCC	7 cut(s)	13, 120, 121, 130, 240, 1263, 1355
NmeAIII	GCCGAG	1 cut(s)	1399
NmuCI	GTSAC	3 cut(s)	914, 1346, 1431
NspI	RCATGY	1 cut(s)	1335
NspV	TTCGAA	1 cut(s)	879
OliI	CACNNNNGTG	1 cut(s)	636
PaeR7I	CTCGAG	1 cut(s)	843
PceI	AGGCCT	1 cut(s)	1340
PctI	GAATGC	1 cut(s)	835
PfeI	GAWTC	3 cut(s)	194, 579, 776
PflMI	CCANNNNNTGG	1 cut(s)	681
PfoI	TCCNGGA	1 cut(s)	478
PleI	GAGTC	5 cut(s)	320, 789, 900, 1171, 1315
PluTI	GGCGCC	1 cut(s)	15
PpsI	GAGTC	5 cut(s)	320, 789, 900, 1171, 1315
PpuMI	RGGWCCY	1 cut(s)	119
PshBI	ATTAAT	1 cut(s)	606
Psp124BI	GAGCTC	1 cut(s)	1369
Psp5II	RGGWCCY	1 cut(s)	119
Psp6I	CCWGG	5 cut(s)	52, 140, 297, 478, 966
PspGI	CCWGG	5 cut(s)	52, 140, 297, 478, 966
PspN4I	GGNNCC	7 cut(s)	13, 120, 121, 130, 240, 1263, 1355
PspPI	GGNCC	3 cut(s)	119, 751, 1211
PspPPI	RGGWCCY	1 cut(s)	119
PspXI	VCTCGAGB	1 cut(s)	843
PstI	CTGCAG	1 cut(s)	1201
PsuI	RGATCY	2 cut(s)	1232, 1353
PvuII	CAGCTG	1 cut(s)	1217
RsaI	GTAC	3 cut(s)	391, 614, 899
RsaNI	GTAC	3 cut(s)	390, 613, 898
RseI	CAYNNNNRTG	2 cut(s)	636, 1292
SacI	GAGCTC	1 cut(s)	1369
SaqAI	TTAA	5 cut(s)	549, 606, 953, 1043, 1242
Sau3AI	GATC	8 cut(s)	250, 342, 544, 559, 763, 1227, 1232, 1353
Sau96I	GGNCC	3 cut(s)	119, 751, 1211
SchI	GAGTC	5 cut(s)	320, 789, 901, 1172, 1315
ScrFI	CCNGG	5 cut(s)	54, 142, 299, 480, 968
SduI	GDGCHC	1 cut(s)	1369
SfaNI	GCATC	4 cut(s)	170, 721, 778, 1144
SfcI	CTRYAG	1 cut(s)	1197
SfoI	GGCGCC	1 cut(s)	13
Sfr274I	CTCGAG	1 cut(s)	843
SfuI	TTCGAA	1 cut(s)	879
SinI	GGWCC	3 cut(s)	119, 751, 1211
SlaI	CTCGAG	1 cut(s)	843
SmiMI	CAYNNNNRTG	2 cut(s)	636, 1292
SmlI	CTYRAG	1 cut(s)	843
SmoI	CTYRAG	1 cut(s)	843
SpeI	ACTAGT	1 cut(s)	1084
Sse9I	AATT	9 cut(s)	394, 523, 564, 603, 654, 709, 816, 1009, 1267
SseBI	AGGCCT	1 cut(s)	1340
SsiI	CCGC	7 cut(s)	15, 18, 21, 24, 338, 367, 1344
SspDI	GGCGCC	1 cut(s)	11
SspI	AATATT	1 cut(s)	1442
SspMI	CTAG	2 cut(s)	648, 1085
SstI	GAGCTC	1 cut(s)	1369
StuI	AGGCCT	1 cut(s)	1340
StyD4I	CCNGG	5 cut(s)	52, 140, 297, 478, 966
StyI	CCWWGG	1 cut(s)	634
TaaI	ACNGT	5 cut(s)	286, 442, 476, 1025, 1463
TaiI	ACGT	1 cut(s)	225
TaqI	TCGA	6 cut(s)	177, 688, 844, 879, 1114, 1452
TaqII	GACCGA	1 cut(s)	768
TasI	AATT	9 cut(s)	394, 523, 564, 603, 654, 709, 816, 1009, 1267
TatI	WGTACW	1 cut(s)	897
TauI	GCSGC	4 cut(s)	17, 20, 23, 26
TfiI	GAWTC	3 cut(s)	194, 579, 776
Tru1I	TTAA	5 cut(s)	549, 606, 953, 1043, 1242
Tru9I	TTAA	5 cut(s)	549, 606, 953, 1043, 1242
TscAI	CASTG	2 cut(s)	919, 1294
TseFI	GTSAC	3 cut(s)	914, 1346, 1431
TseI	GCWGC	6 cut(s)	26, 29, 569, 671, 1196, 1456
Tsp45I	GTSAC	3 cut(s)	914, 1346, 1431
TspDTI	ATGAA	4 cut(s)	819, 828, 1200, 1310
TspGWI	ACGGA	1 cut(s)	1438
TspRI	CASTG	2 cut(s)	919, 1294
Van91I	CCANNNNNTGG	1 cut(s)	681
VpaK11BI	GGWCC	3 cut(s)	119, 751, 1211
VspI	ATTAAT	1 cut(s)	606
XagI	CCTNNNNNAGG	1 cut(s)	1244
XapI	RAATTY	3 cut(s)	654, 816, 1009
XceI	RCATGY	1 cut(s)	1335
XhoI	CTCGAG	1 cut(s)	843
XmiI	GTMKAC	3 cut(s)	519, 963, 1328
XspI	CTAG	2 cut(s)	648, 1085

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.