Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0004188

Physical Location & Seq

Genomic Coordinates Reverse (-)

58316738 .. 58327412

Gene Structure 10675 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG371000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGAGGGTGGCGCCGCCGCCGCCGCTGCTGCTATTGAAACGCAGAGAAACCCAGGACGACCAGCCCATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGCCGAAGGTGGTGGTCATTATGGGACCCACAGGTTCCGGAAAGTCCAGGCTCGCCATTGATTTGGCAGCCCACTTTCCCGTCGAAGTAATCAACGCCGATTCAATGCAGGTTTACAATGGTTTGGACGTTCTCACCAACAAGGTTCCTCTCCACGATCAAAAGGGAGTGCCTCATCATCTTCTGGGGACTGTAAGCCCAAACCTGGAGTTTACTGCTAAAGACTTCAGGGACTCTGCCATTCCGCTGATCAATGACATCTTGTCTCGCAACCGCCTTCCAGTCATAGTTGGGGGTACAAATTACTATATTCAGGCTCTTGTTAGTCCATTCCTTCTTGACGACACAGTAGAAGATATGGAAGAAAGCTTTTTAGATGACCATCCAGGAGTGGGACAACAACAGACTGAGCTGGCATTTGAAGTAGACAATTCCAGTTATAGTTATGACGATCTTAAAGTCATTGATCCAATTGCAGCAAACCGAATCCATCCAAATAATCACAGAAAAATTAATCAGTACCTTAGTATGTATGCTCACCATGGTGTTCTCCCTAGCAGAATTCTTCAGGGAAAGGCAGCCAAAAACTGGGGTCGAGTTGATAACTTCAGATACAATTGCTGTTTTATATGTGTGGATGCTTCTCTTCCTGTGCTGGACCGATTTGTGGATCAAAGAGTAGATTCCATGATAGATGCTGGACTCCTTGATGAAGTCTACGAAATTTTTTCTCGGAATGCAGATTATACTCGAGGTTTCCGGCAGGCCATTGGGGTTAGGGAGTTCGAAAGTTTTTTGAGTCTGTACATAACTGAAGCCAGTGACAAAGGAAATCATTTGATAGATGGGTCAATGTCCTTAAAGTCAGTAGACCTGGCTGATAAGATATTGAAAGAGAACATGAGGCTCATCCTGAATTCCTTGATTGACAGTCAACCCAACTCTGTGTTAAAAGAAGCTATTGAGAAAGTAAAACTGAACACCAGAAGACTAGTTCGTCGTCAGAAACGAAGGATAAATCGATTGGATACGTTGTTCGGATGGAACATACATTCCCTTGATGCAACTGAGTCCATTTTATGCAAATCGGATGATACATGGGCTGCAGAGGTTGTTGGACCAGCTGTTGACTTGATCAGATCTTTCCTAAATCAGGAAGCAACATTGGTGCCTAATTTGGATACCCCAAATAGCACTGAAATGAATATGATACAGAGGGACTTATGGACTCAGTATACATGCAAGGCCTGCGGTGACAGGATCCTTAGAGGAGCTCACGAGTGGGAACAACACAAGCAGGGTCGTGGACATCGGAAACGAGTTTCTCAGCTACAAAAGTCTCGAAAATATTTGTCCGTCGAGCAGCACAGTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009308 GO:0009451 GO:0009690 GO:0009691 GO:0009824 GO:0009987 GO:0010467 GO:0010817 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0034754 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:0090304 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

493

Amino Acids

55.66

Weight (kDa)

5.51

Isoelectric Point (pI)

40.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPPT	PF01715	72 - 372	5.9e-52	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27760
fragaria_vesca	FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650
malus_domestica	MD03G1136100.v1.1
prunus_persica	Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1
pyrus_communis	pycom03g09200
rosa_chinensis	RchiOBHm_Chr5g0055011
rosa_laevigata	RLG00000034956
rosa_multiflora	Rmu_sc0003653.1_g000029
rosa_roxburghii	Rroxscaffold_1G00025500
rosa_rugosa	Rorug05G0289900 Rorug05G0290000
rosa_samantha	Rh5AG360000 Rh5BG371000 Rh5CG393300 Rh5DG384800
rosa_wichuraiana	Rw5G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1101
Acc36I	ACCTGC	1 cut(s)	205
AccB1I	GGYRCC	2 cut(s)	11, 1273
AccB7I	CCANNNNNTGG	1 cut(s)	693
AccI	GTMKAC	4 cut(s)	531, 822, 975, 1340
AccIII	TCCGGA	1 cut(s)	143
AciI	CCGC	7 cut(s)	15, 18, 21, 24, 350, 379, 1356
AclWI	GGATC	4 cut(s)	566, 783, 1360, 1373
AcsI	RAATTY	3 cut(s)	666, 828, 1021
AcuI	CTGAAG	4 cut(s)	316, 656, 697, 939
AcyI	GRCGYC	1 cut(s)	12
AfaI	GTAC	3 cut(s)	403, 626, 911
AfiI	CCNNNNNNNGG	5 cut(s)	310, 497, 693, 772, 1258
AgsI	TTSAA	4 cut(s)	38, 210, 527, 997
AhdI	GACNNNNNGTC	1 cut(s)	367
AhlI	ACTAGT	1 cut(s)	1096
AjnI	CCWGG	5 cut(s)	52, 152, 309, 490, 978
AleI	CACNNNNGTG	1 cut(s)	648
AloI	GAACNNNNNNTCC	4 cut(s)	1124, 1142, 1156, 1174
AluBI	AGCT	6 cut(s)	474, 517, 1064, 1229, 1379, 1435
AluI	AGCT	6 cut(s)	474, 517, 1064, 1229, 1379, 1435
Alw21I	GWGCWC	1 cut(s)	1381
Alw26I	GTCTC	2 cut(s)	375, 1449
AlwI	GGATC	4 cut(s)	566, 783, 1360, 1373
Ama87I	CYCGRG	1 cut(s)	855
Aor13HI	TCCGGA	1 cut(s)	143
AoxI	GGCC	2 cut(s)	870, 1350
ApeKI	GCWGC	7 cut(s)	26, 29, 173, 581, 683, 1208, 1468
ApoI	RAATTY	3 cut(s)	666, 828, 1021
AseI	ATTAAT	1 cut(s)	618
AspLEI	GCGC	1 cut(s)	14
AspS9I	GGNCC	3 cut(s)	131, 763, 1223
AsuHPI	GGTGA	3 cut(s)	232, 635, 1370
AsuII	TTCGAA	1 cut(s)	891
AvaI	CYCGRG	1 cut(s)	855
AvaII	GGWCC	3 cut(s)	131, 763, 1223
BamHI	GGATCC	1 cut(s)	1365
BanI	GGYRCC	2 cut(s)	11, 1273
BanII	GRGCYC	1 cut(s)	1381
BauI	CACGAG	1 cut(s)	1382
BbsI	GAAGAC	1 cut(s)	1099
Bbv12I	GWGCWC	1 cut(s)	1381
BbvI	GCAGC	6 cut(s)	13, 16, 185, 593, 695, 1195
BccI	CCATC	4 cut(s)	495, 603, 944, 1140
BciT130I	CCWGG	5 cut(s)	54, 154, 311, 492, 980
BciVI	GTATCC	2 cut(s)	1126, 1279
BclI	TGATCA	2 cut(s)	354, 1239
BcoDI	GTCTC	2 cut(s)	375, 1449
BcuI	ACTAGT	1 cut(s)	1096
BfaI	CTAG	2 cut(s)	660, 1097
BfmI	CTRYAG	1 cut(s)	1209
BfoI	RGCGCY	1 cut(s)	15
BfuAI	ACCTGC	1 cut(s)	205
BfuI	GTATCC	2 cut(s)	1126, 1279
BglII	AGATCT	1 cut(s)	1244
Bme1390I	CCNGG	5 cut(s)	54, 154, 311, 492, 980
Bme18I	GGWCC	3 cut(s)	131, 763, 1223
BmeRI	GACNNNNNGTC	1 cut(s)	367
BmeT110I	CYCGRG	1 cut(s)	855
BmgT120I	GGNCC	3 cut(s)	131, 763, 1223
BmiI	GGNNCC	7 cut(s)	13, 132, 133, 142, 252, 1275, 1367
BmrFI	CCNGG	5 cut(s)	54, 154, 311, 492, 980
BmrI	ACTGGG	1 cut(s)	703
BmsI	GCATC	3 cut(s)	733, 790, 1156
BmuI	ACTGGG	1 cut(s)	703
BpiI	GAAGAC	1 cut(s)	1099
BpmI	CTGGAG	1 cut(s)	332
Bpu14I	TTCGAA	1 cut(s)	891
Bsa29I	ATCGAT	1 cut(s)	1126
BsaBI	GATNNNNATC	1 cut(s)	486
BsaHI	GRCGYC	1 cut(s)	12
BsaJI	CCNNGG	2 cut(s)	52, 646
BsaWI	WCCGGW	1 cut(s)	143
Bsc4I	CCNNNNNNNGG	5 cut(s)	310, 497, 693, 772, 1258
Bse1I	ACTGG	4 cut(s)	386, 540, 698, 924
Bse8I	GATNNNNATC	1 cut(s)	486
BseAI	TCCGGA	1 cut(s)	143
BseBI	CCWGG	5 cut(s)	54, 154, 311, 492, 980
BseCI	ATCGAT	1 cut(s)	1126
BseDI	CCNNGG	2 cut(s)	52, 646
BseGI	GGATG	6 cut(s)	487, 595, 748, 1014, 1151, 1201
BseJI	GATNNNNATC	1 cut(s)	486
BseLI	CCNNNNNNNGG	5 cut(s)	310, 497, 693, 772, 1258
BseMII	CTCAG	4 cut(s)	504, 1164, 1349, 1445
BseNI	ACTGG	4 cut(s)	386, 540, 698, 924
BseRI	GAGGAG	1 cut(s)	1389
BseXI	GCAGC	6 cut(s)	13, 16, 185, 593, 695, 1195
BshFI	GGCC	2 cut(s)	872, 1352
BshNI	GGYRCC	2 cut(s)	11, 1273
BshVI	ATCGAT	1 cut(s)	1126
BsiHKAI	GWGCWC	1 cut(s)	1381
BsiHKCI	CYCGRG	1 cut(s)	855
BsiSI	CCGG	2 cut(s)	144, 865
BslFI	GGGAC	5 cut(s)	144, 307, 350, 513, 1337
BslI	CCNNNNNNNGG	5 cut(s)	310, 497, 693, 772, 1258
BsmAI	GTCTC	2 cut(s)	375, 1449
BsmFI	GGGAC	5 cut(s)	144, 307, 350, 513, 1337
BsmI	GAATGC	1 cut(s)	847
BsnI	GGCC	2 cut(s)	872, 1352
BsoBI	CYCGRG	1 cut(s)	855
Bsp119I	TTCGAA	1 cut(s)	891
Bsp1286I	GDGCHC	1 cut(s)	1381
Bsp13I	TCCGGA	1 cut(s)	143
Bsp1407I	TGTACA	1 cut(s)	909
Bsp143I	GATC	8 cut(s)	262, 354, 556, 571, 775, 1239, 1244, 1365
Bsp19I	CCATGG	1 cut(s)	646
BspACI	CCGC	7 cut(s)	15, 18, 21, 24, 350, 379, 1356
BspANI	GGCC	2 cut(s)	872, 1352
BspCNI	CTCAG	4 cut(s)	505, 1165, 1348, 1444
BspDI	ATCGAT	1 cut(s)	1126
BspEI	TCCGGA	1 cut(s)	143
BspLI	GGNNCC	7 cut(s)	13, 132, 133, 142, 252, 1275, 1367
BspMAI	CTGCAG	1 cut(s)	1213
BspMI	ACCTGC	1 cut(s)	205
BspPI	GGATC	4 cut(s)	566, 783, 1360, 1373
BspT104I	TTCGAA	1 cut(s)	891
BspT107I	GGYRCC	2 cut(s)	11, 1273
BsrGI	TGTACA	1 cut(s)	909
BsrI	ACTGG	4 cut(s)	386, 540, 698, 924
BssECI	CCNNGG	2 cut(s)	52, 646
BssMI	GATC	8 cut(s)	262, 354, 556, 571, 775, 1239, 1244, 1365
BssNAI	GTATAC	1 cut(s)	1341
BssNI	GRCGYC	1 cut(s)	12
BssSI	CACGAG	1 cut(s)	1382
BssT1I	CCWWGG	1 cut(s)	646
Bst1107I	GTATAC	1 cut(s)	1341
Bst2BI	CACGAG	1 cut(s)	1382
Bst2UI	CCWGG	5 cut(s)	54, 154, 311, 492, 980
Bst4CI	ACNGT	4 cut(s)	298, 454, 1037, 1475
Bst6I	CTCTTC	2 cut(s)	96, 756
BstACI	GRCGYC	1 cut(s)	12
BstAPI	GCANNNNNTGC	1 cut(s)	1353
BstAUI	TGTACA	1 cut(s)	909
BstBI	TTCGAA	1 cut(s)	891
BstC8I	GCNNGC	4 cut(s)	159, 519, 870, 1354
BstDEI	CTNAG	6 cut(s)	513, 629, 1173, 1335, 1370, 1431
BstDSI	CCRYGG	1 cut(s)	646
BstENI	CCTNNNNNAGG	1 cut(s)	1256
BstF5I	GGATG	6 cut(s)	487, 595, 748, 1014, 1151, 1201
BstH2I	RGCGCY	1 cut(s)	15
BstHHI	GCGC	1 cut(s)	14
BstKTI	GATC	8 cut(s)	265, 357, 559, 574, 778, 1242, 1247, 1368
BstMAI	GTCTC	2 cut(s)	375, 1449
BstMBI	GATC	8 cut(s)	262, 354, 556, 571, 775, 1239, 1244, 1365
BstMWI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1353
BstNI	CCWGG	5 cut(s)	54, 154, 311, 492, 980
BstNSI	RCATGY	1 cut(s)	1347
BstSCI	CCNGG	5 cut(s)	52, 152, 309, 490, 978
BstSFI	CTRYAG	1 cut(s)	1209
BstV1I	GCAGC	6 cut(s)	13, 16, 185, 593, 695, 1195
BstV2I	GAAGAC	1 cut(s)	1099
BstX2I	RGATCY	2 cut(s)	1244, 1365
BstXI	CCANNNNNNTGG	1 cut(s)	169
BstYI	RGATCY	2 cut(s)	1244, 1365
BstZ17I	GTATAC	1 cut(s)	1341
Bsu15I	ATCGAT	1 cut(s)	1126
BsuI	GTATCC	2 cut(s)	1126, 1279
BsuRI	GGCC	2 cut(s)	872, 1352
BsuTUI	ATCGAT	1 cut(s)	1126
BtgI	CCRYGG	1 cut(s)	646
BtsCI	GGATG	6 cut(s)	487, 595, 748, 1014, 1151, 1201
BtsIMutI	CAGTG	2 cut(s)	931, 1299
BveI	ACCTGC	1 cut(s)	205
Cac8I	GCNNGC	4 cut(s)	159, 519, 870, 1354
CfoI	GCGC	1 cut(s)	14
Cfr13I	GGNCC	3 cut(s)	131, 763, 1223
ClaI	ATCGAT	1 cut(s)	1126
Csp6I	GTAC	3 cut(s)	402, 625, 910
CviAII	CATG	6 cut(s)	68, 647, 793, 1006, 1203, 1344
CviQI	GTAC	3 cut(s)	402, 625, 910
DdeI	CTNAG	6 cut(s)	513, 629, 1173, 1335, 1370, 1431
DinI	GGCGCC	1 cut(s)	13
DpnI	GATC	8 cut(s)	264, 356, 558, 573, 777, 1241, 1246, 1367
DpnII	GATC	8 cut(s)	262, 354, 556, 571, 775, 1239, 1244, 1365
DrdI	GACNNNNNNGTC	1 cut(s)	1101
DriI	GACNNNNNGTC	1 cut(s)	367
DseDI	GACNNNNNNGTC	1 cut(s)	1101
Eam1104I	CTCTTC	2 cut(s)	96, 756
Eam1105I	GACNNNNNGTC	1 cut(s)	367
EarI	CTCTTC	2 cut(s)	96, 756
Ecl136II	GAGCTC	1 cut(s)	1379
Eco130I	CCWWGG	1 cut(s)	646
Eco147I	AGGCCT	1 cut(s)	1352
Eco24I	GRGCYC	1 cut(s)	1381
Eco47I	GGWCC	3 cut(s)	131, 763, 1223
Eco53kI	GAGCTC	1 cut(s)	1379
Eco57I	CTGAAG	4 cut(s)	316, 656, 697, 939
Eco88I	CYCGRG	1 cut(s)	855
EcoICRI	GAGCTC	1 cut(s)	1379
EcoNI	CCTNNNNNAGG	1 cut(s)	1256
EcoO109I	RGGNCCY	1 cut(s)	131
EcoRI	GAATTC	2 cut(s)	666, 1021
EcoRII	CCWGG	5 cut(s)	52, 152, 309, 490, 978
EcoT14I	CCWWGG	1 cut(s)	646
EcoT38I	GRGCYC	1 cut(s)	1381
EgeI	GGCGCC	1 cut(s)	13
EheI	GGCGCC	1 cut(s)	13
ErhI	CCWWGG	1 cut(s)	646
FaeI	CATG	6 cut(s)	71, 650, 796, 1009, 1206, 1347
FaqI	GGGAC	5 cut(s)	144, 307, 350, 513, 1337
FatI	CATG	6 cut(s)	67, 646, 792, 1005, 1202, 1343
FbaI	TGATCA	2 cut(s)	354, 1239
FblI	GTMKAC	4 cut(s)	531, 822, 975, 1340
FokI	GGATG	6 cut(s)	474, 582, 755, 1001, 1158, 1208
FriOI	GRGCYC	1 cut(s)	1381
FspBI	CTAG	2 cut(s)	660, 1097
GlaI	GCGC	1 cut(s)	13
GsuI	CTGGAG	1 cut(s)	332
HaeII	RGCGCY	1 cut(s)	15
HaeIII	GGCC	2 cut(s)	872, 1352
HapII	CCGG	2 cut(s)	144, 865
HhaI	GCGC	1 cut(s)	14
Hin1I	GRCGYC	1 cut(s)	12
Hin1II	CATG	6 cut(s)	71, 650, 796, 1009, 1206, 1347
Hin6I	GCGC	1 cut(s)	12
HinP1I	GCGC	1 cut(s)	12
HincII	GTYRAC	2 cut(s)	1040, 1234
HindII	GTYRAC	2 cut(s)	1040, 1234
HindIII	AAGCTT	1 cut(s)	472
HinfI	GANTC	8 cut(s)	206, 338, 591, 788, 807, 904, 1175, 1333
HpaII	CCGG	2 cut(s)	144, 865
HphI	GGTGA	3 cut(s)	232, 635, 1370
Hpy166II	GTNNAC	9 cut(s)	220, 318, 532, 823, 976, 1040, 1234, 1341, 1412
Hpy188I	TCNGA	7 cut(s)	716, 840, 1110, 1145, 1195, 1244, 1419
Hpy188III	TCNNGA	6 cut(s)	144, 443, 1018, 1259, 1382, 1446
Hpy8I	GTNNAC	9 cut(s)	220, 318, 532, 823, 976, 1040, 1234, 1341, 1412
Hpy99I	CGWCG	3 cut(s)	191, 1107, 1466
HpyAV	CCTTC	4 cut(s)	106, 392, 449, 1110
HpyCH4III	ACNGT	4 cut(s)	298, 454, 1037, 1475
HpyCH4IV	ACGT	2 cut(s)	234, 1136
HpyCH4V	TGCA	7 cut(s)	214, 581, 845, 1169, 1188, 1211, 1347
HpyF10VI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1353
HpyF3I	CTNAG	6 cut(s)	513, 629, 1173, 1335, 1370, 1431
HpySE526I	ACGT	2 cut(s)	234, 1136
Hsp92I	GRCGYC	1 cut(s)	12
Hsp92II	CATG	6 cut(s)	71, 650, 796, 1009, 1206, 1347
HspAI	GCGC	1 cut(s)	12
KasI	GGCGCC	1 cut(s)	11
KflI	GGGWCCC	1 cut(s)	131
Kpn2I	TCCGGA	1 cut(s)	143
Ksp22I	TGATCA	2 cut(s)	354, 1239
Kzo9I	GATC	8 cut(s)	262, 354, 556, 571, 775, 1239, 1244, 1365
LmnI	GCTCC	1 cut(s)	1376
Lsp1109I	GCAGC	6 cut(s)	13, 16, 185, 593, 695, 1195
LweI	GCATC	3 cut(s)	733, 790, 1156
MaeI	CTAG	2 cut(s)	660, 1097
MaeII	ACGT	2 cut(s)	234, 1136
MaeIII	GTNAC	2 cut(s)	926, 1358
MalI	GATC	8 cut(s)	264, 356, 558, 573, 777, 1241, 1246, 1367
MboI	GATC	8 cut(s)	262, 354, 556, 571, 775, 1239, 1244, 1365
MfeI	CAATTG	2 cut(s)	576, 721
MflI	RGATCY	2 cut(s)	1244, 1365
MhlI	GDGCHC	1 cut(s)	1381
MluCI	AATT	9 cut(s)	406, 535, 576, 615, 666, 721, 828, 1021, 1279
Mly113I	GGCGCC	1 cut(s)	12
MlyI	GAGTC	5 cut(s)	332, 801, 913, 1184, 1327
MmeI	TCCRAC	1 cut(s)	1201
MnlI	CCTC	7 cut(s)	264, 288, 851, 1002, 1207, 1314, 1367
MroI	TCCGGA	1 cut(s)	143
MseI	TTAA	4 cut(s)	561, 618, 965, 1055
MslI	CAYNNNNRTG	2 cut(s)	648, 1304
MspA1I	CMGCKG	3 cut(s)	26, 352, 1229
MspI	CCGG	2 cut(s)	144, 865
MspR9I	CCNGG	5 cut(s)	54, 154, 311, 492, 980
MunI	CAATTG	2 cut(s)	576, 721
Mva1269I	GAATGC	1 cut(s)	847
MvaI	CCWGG	5 cut(s)	54, 154, 311, 492, 980
MwoI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1353
NarI	GGCGCC	1 cut(s)	12
NcoI	CCATGG	1 cut(s)	646
NdeII	GATC	8 cut(s)	262, 354, 556, 571, 775, 1239, 1244, 1365
NlaIII	CATG	6 cut(s)	71, 650, 796, 1009, 1206, 1347
NlaIV	GGNNCC	7 cut(s)	13, 132, 133, 142, 252, 1275, 1367
NmuCI	GTSAC	2 cut(s)	926, 1358
NspI	RCATGY	1 cut(s)	1347
NspV	TTCGAA	1 cut(s)	891
OliI	CACNNNNGTG	1 cut(s)	648
PaeR7I	CTCGAG	1 cut(s)	855
PceI	AGGCCT	1 cut(s)	1352
PcsI	WCGNNNNNNNCGW	1 cut(s)	1111
PctI	GAATGC	1 cut(s)	847
PfeI	GAWTC	3 cut(s)	206, 591, 788
PflMI	CCANNNNNTGG	1 cut(s)	693
PfoI	TCCNGGA	1 cut(s)	490
PleI	GAGTC	5 cut(s)	332, 801, 912, 1183, 1327
PluTI	GGCGCC	1 cut(s)	15
PpsI	GAGTC	5 cut(s)	332, 801, 912, 1183, 1327
PpuMI	RGGWCCY	1 cut(s)	131
PshBI	ATTAAT	1 cut(s)	618
Psp124BI	GAGCTC	1 cut(s)	1381
Psp5II	RGGWCCY	1 cut(s)	131
Psp6I	CCWGG	5 cut(s)	52, 152, 309, 490, 978
PspGI	CCWGG	5 cut(s)	52, 152, 309, 490, 978
PspN4I	GGNNCC	7 cut(s)	13, 132, 133, 142, 252, 1275, 1367
PspPI	GGNCC	3 cut(s)	131, 763, 1223
PspPPI	RGGWCCY	1 cut(s)	131
PspXI	VCTCGAGB	1 cut(s)	855
PstI	CTGCAG	1 cut(s)	1213
PsuI	RGATCY	2 cut(s)	1244, 1365
PvuII	CAGCTG	1 cut(s)	1229
RsaI	GTAC	3 cut(s)	403, 626, 911
RsaNI	GTAC	3 cut(s)	402, 625, 910
RseI	CAYNNNNRTG	2 cut(s)	648, 1304
SacI	GAGCTC	1 cut(s)	1381
SaqAI	TTAA	4 cut(s)	561, 618, 965, 1055
Sau3AI	GATC	8 cut(s)	262, 354, 556, 571, 775, 1239, 1244, 1365
Sau96I	GGNCC	3 cut(s)	131, 763, 1223
SchI	GAGTC	5 cut(s)	332, 801, 913, 1184, 1327
ScrFI	CCNGG	5 cut(s)	54, 154, 311, 492, 980
SduI	GDGCHC	1 cut(s)	1381
SfaNI	GCATC	3 cut(s)	733, 790, 1156
SfcI	CTRYAG	1 cut(s)	1209
SfoI	GGCGCC	1 cut(s)	13
Sfr274I	CTCGAG	1 cut(s)	855
SfuI	TTCGAA	1 cut(s)	891
SinI	GGWCC	3 cut(s)	131, 763, 1223
SlaI	CTCGAG	1 cut(s)	855
SmiMI	CAYNNNNRTG	2 cut(s)	648, 1304
SmlI	CTYRAG	1 cut(s)	855
SmoI	CTYRAG	1 cut(s)	855
SpeI	ACTAGT	1 cut(s)	1096
Sse9I	AATT	9 cut(s)	406, 535, 576, 615, 666, 721, 828, 1021, 1279
SseBI	AGGCCT	1 cut(s)	1352
SsiI	CCGC	7 cut(s)	15, 18, 21, 24, 350, 379, 1356
SspDI	GGCGCC	1 cut(s)	11
SspI	AATATT	1 cut(s)	1454
SspMI	CTAG	2 cut(s)	660, 1097
SstI	GAGCTC	1 cut(s)	1381
StuI	AGGCCT	1 cut(s)	1352
StyD4I	CCNGG	5 cut(s)	52, 152, 309, 490, 978
StyI	CCWWGG	1 cut(s)	646
TaaI	ACNGT	4 cut(s)	298, 454, 1037, 1475
TaiI	ACGT	2 cut(s)	237, 1139
TaqI	TCGA	7 cut(s)	189, 700, 856, 891, 1126, 1447, 1464
TaqII	GACCGA	1 cut(s)	780
TasI	AATT	9 cut(s)	406, 535, 576, 615, 666, 721, 828, 1021, 1279
TatI	WGTACW	1 cut(s)	909
TauI	GCSGC	4 cut(s)	17, 20, 23, 26
TfiI	GAWTC	3 cut(s)	206, 591, 788
Tru1I	TTAA	4 cut(s)	561, 618, 965, 1055
Tru9I	TTAA	4 cut(s)	561, 618, 965, 1055
TscAI	CASTG	2 cut(s)	931, 1306
TseFI	GTSAC	2 cut(s)	926, 1358
TseI	GCWGC	7 cut(s)	26, 29, 173, 581, 683, 1208, 1468
Tsp45I	GTSAC	2 cut(s)	926, 1358
TspDTI	ATGAA	3 cut(s)	84, 831, 1322
TspGWI	ACGGA	1 cut(s)	1450
TspRI	CASTG	2 cut(s)	931, 1306
Van91I	CCANNNNNTGG	1 cut(s)	693
VpaK11BI	GGWCC	3 cut(s)	131, 763, 1223
VspI	ATTAAT	1 cut(s)	618
XagI	CCTNNNNNAGG	1 cut(s)	1256
XapI	RAATTY	3 cut(s)	666, 828, 1021
XceI	RCATGY	1 cut(s)	1347
XhoI	CTCGAG	1 cut(s)	855
XmiI	GTMKAC	4 cut(s)	531, 822, 975, 1340
XspI	CTAG	2 cut(s)	660, 1097

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.