Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004188

Physical Location & Seq

Genomic Coordinates Reverse (-)

57800660 .. 57810472

Gene Structure 9813 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G033870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGGAGGGTGGCGCCGCCGCCGCCGCTGCTGCTATTGAAACGCAGAGAAACCCAGGACGACCAGCCCATGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGCCGAAGGTGGTGGTCATTATGGGACCCACAGGTTCCGGAAAGTCCAGGCTCGCCATTGATTTGGCATCCCACTTTCCCGTCGAAGTAATCAACGCCGATTCAATGCAGGTTTACAATGGTTTGGACGTTCTCACCAACAAGGTTCCTCTCCACGATCAAAAGGGAGTGCCTCATCATCTTCTTGGGACTGTAAGCCCAAACCTGGAGTTTACTGCTAAAGACTTCAGGGACTCTGCCGTTCCGCTGATCAATGACATCTTGTCTCGCAACTGCCTTCCAGTCATAGTTGGGGGTACAAATTACTATATTCAGGCTCTTGTTAGTCCATTCCTTCTTGACGACACAGTAGAAGATATGGAAGAAAGCTTTTTAGATGACCATCCAGGAGTGGGACAACAACAGACTGAGCTGGCATTTGAAGTAGACAATTCCAGTTATAGTTATGACGATCTTAAAGTCATTGATCCAATTGCAGCAAACCGAATCCATCCAAATAATCACAGAAAAATTAATCAGTACCTTAGTATGTATGCTCACCATGGTGTTCTCCCTAGCAGAATTCTTCAGGGAAAGGCAGCCAAAAACTGGGGTCGAGTTGATAACTTCAGATACAATTGCTGTTTTATATGTGTGGATGCTTCTCTTCCTGTGCTGGACCGATTTGTGGATCAAAGAGTAGATTCCATGATAGATGCTGGACTCCTTGATGAAGTCTACGAAATTTTTTCTCGGAATGCAGATTATACTCGAGGTTTCCGGCAGGCCATTGGGGTTAGGGAGTTCGAAAGTTTTTTGAGTCTGTACATAACTGAAGCCAGTGACAAAGGAAATCATTTGATAGATGGGTCAATGTCCTTAAAGTCAGTAGACCTGGCTGATAAGATATTGAAAGAGAACATGAGGCTCATCCTGAATTCCTTGATTGACAGTCAACCCAACTCTGTGTTAAAAGAAGCTATTGAGAAAGTAAAACTGAACACCAGAAGACTAGTTCGTCGTCAGAAACGAAGGATAAATCGACTGGATACGTTGTTCGGATGGAACATACATTCCCTTGATGCAACTGAGTCCATTTTATGCAAATCGGATGATACATGGGCTGCAGAGGTTGTTGGACCAGCTGTTGACTTGATCAGATCTTTCCTAAATCAGGAAGCAACATTGGTGCCTAATTTGGATACCCCAAATAGCACTGAAATGAATATGATACAGAGGGACTTATGGACTCAGTATACATGCAAGGCCTGCGGTGACAGGATCCTTAGAGGAGCTCACGAGTGGGAACAACACAAGCAGGGTCGTGGACATCGGAAACGAGTTTCTCGGCTACAAAAGTCTCGAAAATATTTGTCCGTCGAGCAGCACAGTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009308 GO:0009451 GO:0009690 GO:0009691 GO:0009824 GO:0009987 GO:0010467 GO:0010817 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0034754 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:0090304 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

490

Amino Acids

55.25

Weight (kDa)

5.7

Isoelectric Point (pI)

39.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPPT	PF01715	69 - 369	5.6e-51	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27760
fragaria_vesca	FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650
malus_domestica	MD03G1136100.v1.1
prunus_persica	Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1
pyrus_communis	pycom03g09200
rosa_chinensis	RchiOBHm_Chr5g0055011
rosa_laevigata	RLG00000034956
rosa_multiflora	Rmu_sc0003653.1_g000029
rosa_roxburghii	Rroxscaffold_1G00025500
rosa_rugosa	Rorug05G0289900 Rorug05G0290000
rosa_samantha	Rh5AG360000 Rh5BG371000 Rh5CG393300 Rh5DG384800
rosa_wichuraiana	Rw5G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1092
Acc36I	ACCTGC	1 cut(s)	196
AccB1I	GGYRCC	2 cut(s)	11, 1264
AccB7I	CCANNNNNTGG	1 cut(s)	684
AccI	GTMKAC	4 cut(s)	522, 813, 966, 1331
AccIII	TCCGGA	1 cut(s)	134
AciI	CCGC	6 cut(s)	15, 18, 21, 24, 341, 1347
AclWI	GGATC	4 cut(s)	557, 774, 1351, 1364
AcsI	RAATTY	3 cut(s)	657, 819, 1012
AcuI	CTGAAG	4 cut(s)	307, 647, 688, 930
AcyI	GRCGYC	1 cut(s)	12
AfaI	GTAC	3 cut(s)	394, 617, 902
AfiI	CCNNNNNNNGG	5 cut(s)	301, 488, 684, 763, 1249
AgsI	TTSAA	4 cut(s)	38, 201, 518, 988
AhdI	GACNNNNNGTC	1 cut(s)	358
AhlI	ACTAGT	1 cut(s)	1087
AjnI	CCWGG	5 cut(s)	52, 143, 300, 481, 969
AleI	CACNNNNGTG	1 cut(s)	639
AloI	GAACNNNNNNTCC	4 cut(s)	1115, 1133, 1147, 1165
AluBI	AGCT	5 cut(s)	465, 508, 1055, 1220, 1370
AluI	AGCT	5 cut(s)	465, 508, 1055, 1220, 1370
Alw21I	GWGCWC	1 cut(s)	1372
Alw26I	GTCTC	2 cut(s)	366, 1440
AlwI	GGATC	4 cut(s)	557, 774, 1351, 1364
Ama87I	CYCGRG	1 cut(s)	846
Aor13HI	TCCGGA	1 cut(s)	134
AoxI	GGCC	2 cut(s)	861, 1341
ApeKI	GCWGC	6 cut(s)	26, 29, 572, 674, 1199, 1459
ApoI	RAATTY	3 cut(s)	657, 819, 1012
AseI	ATTAAT	1 cut(s)	609
AspLEI	GCGC	1 cut(s)	14
AspS9I	GGNCC	3 cut(s)	122, 754, 1214
AsuHPI	GGTGA	3 cut(s)	223, 626, 1361
AsuII	TTCGAA	1 cut(s)	882
AvaI	CYCGRG	1 cut(s)	846
AvaII	GGWCC	3 cut(s)	122, 754, 1214
BamHI	GGATCC	1 cut(s)	1356
BanI	GGYRCC	2 cut(s)	11, 1264
BanII	GRGCYC	1 cut(s)	1372
BauI	CACGAG	1 cut(s)	1373
BbsI	GAAGAC	1 cut(s)	1090
Bbv12I	GWGCWC	1 cut(s)	1372
BbvI	GCAGC	5 cut(s)	13, 16, 584, 686, 1186
BccI	CCATC	4 cut(s)	486, 594, 935, 1131
BceAI	ACGGC	1 cut(s)	320
BciT130I	CCWGG	5 cut(s)	54, 145, 302, 483, 971
BciVI	GTATCC	2 cut(s)	1117, 1270
BclI	TGATCA	2 cut(s)	345, 1230
BcoDI	GTCTC	2 cut(s)	366, 1440
BcuI	ACTAGT	1 cut(s)	1087
BfaI	CTAG	2 cut(s)	651, 1088
BfmI	CTRYAG	1 cut(s)	1200
BfoI	RGCGCY	1 cut(s)	15
BfuAI	ACCTGC	1 cut(s)	196
BfuI	GTATCC	2 cut(s)	1117, 1270
BglII	AGATCT	1 cut(s)	1235
Bme1390I	CCNGG	5 cut(s)	54, 145, 302, 483, 971
Bme18I	GGWCC	3 cut(s)	122, 754, 1214
BmeRI	GACNNNNNGTC	1 cut(s)	358
BmeT110I	CYCGRG	1 cut(s)	846
BmgT120I	GGNCC	3 cut(s)	122, 754, 1214
BmiI	GGNNCC	7 cut(s)	13, 123, 124, 133, 243, 1266, 1358
BmrFI	CCNGG	5 cut(s)	54, 145, 302, 483, 971
BmrI	ACTGGG	1 cut(s)	694
BmsI	GCATC	4 cut(s)	173, 724, 781, 1147
BmuI	ACTGGG	1 cut(s)	694
BpiI	GAAGAC	1 cut(s)	1090
BpmI	CTGGAG	1 cut(s)	323
Bpu14I	TTCGAA	1 cut(s)	882
BsaBI	GATNNNNATC	1 cut(s)	477
BsaHI	GRCGYC	1 cut(s)	12
BsaJI	CCNNGG	2 cut(s)	52, 637
BsaWI	WCCGGW	1 cut(s)	134
Bsc4I	CCNNNNNNNGG	5 cut(s)	301, 488, 684, 763, 1249
Bse1I	ACTGG	5 cut(s)	377, 531, 689, 915, 1125
Bse8I	GATNNNNATC	1 cut(s)	477
BseAI	TCCGGA	1 cut(s)	134
BseBI	CCWGG	5 cut(s)	54, 145, 302, 483, 971
BseDI	CCNNGG	2 cut(s)	52, 637
BseGI	GGATG	7 cut(s)	164, 478, 586, 739, 1005, 1142, 1192
BseJI	GATNNNNATC	1 cut(s)	477
BseLI	CCNNNNNNNGG	5 cut(s)	301, 488, 684, 763, 1249
BseMII	CTCAG	3 cut(s)	495, 1155, 1340
BseNI	ACTGG	5 cut(s)	377, 531, 689, 915, 1125
BseRI	GAGGAG	1 cut(s)	1380
BseXI	GCAGC	5 cut(s)	13, 16, 584, 686, 1186
BshFI	GGCC	2 cut(s)	863, 1343
BshNI	GGYRCC	2 cut(s)	11, 1264
BsiHKAI	GWGCWC	1 cut(s)	1372
BsiHKCI	CYCGRG	1 cut(s)	846
BsiSI	CCGG	2 cut(s)	135, 856
BslFI	GGGAC	5 cut(s)	135, 298, 341, 504, 1328
BslI	CCNNNNNNNGG	5 cut(s)	301, 488, 684, 763, 1249
BsmAI	GTCTC	2 cut(s)	366, 1440
BsmFI	GGGAC	5 cut(s)	135, 298, 341, 504, 1328
BsmI	GAATGC	1 cut(s)	838
BsnI	GGCC	2 cut(s)	863, 1343
BsoBI	CYCGRG	1 cut(s)	846
Bsp119I	TTCGAA	1 cut(s)	882
Bsp1286I	GDGCHC	1 cut(s)	1372
Bsp13I	TCCGGA	1 cut(s)	134
Bsp1407I	TGTACA	1 cut(s)	900
Bsp143I	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
Bsp19I	CCATGG	1 cut(s)	637
BspACI	CCGC	6 cut(s)	15, 18, 21, 24, 341, 1347
BspANI	GGCC	2 cut(s)	863, 1343
BspCNI	CTCAG	3 cut(s)	496, 1156, 1339
BspEI	TCCGGA	1 cut(s)	134
BspLI	GGNNCC	7 cut(s)	13, 123, 124, 133, 243, 1266, 1358
BspMAI	CTGCAG	1 cut(s)	1204
BspMI	ACCTGC	1 cut(s)	196
BspPI	GGATC	4 cut(s)	557, 774, 1351, 1364
BspT104I	TTCGAA	1 cut(s)	882
BspT107I	GGYRCC	2 cut(s)	11, 1264
BsrGI	TGTACA	1 cut(s)	900
BsrI	ACTGG	5 cut(s)	377, 531, 689, 915, 1125
BssECI	CCNNGG	2 cut(s)	52, 637
BssMI	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
BssNAI	GTATAC	1 cut(s)	1332
BssNI	GRCGYC	1 cut(s)	12
BssSI	CACGAG	1 cut(s)	1373
BssT1I	CCWWGG	1 cut(s)	637
Bst1107I	GTATAC	1 cut(s)	1332
Bst2BI	CACGAG	1 cut(s)	1373
Bst2UI	CCWGG	5 cut(s)	54, 145, 302, 483, 971
Bst4CI	ACNGT	4 cut(s)	289, 445, 1028, 1466
Bst6I	CTCTTC	2 cut(s)	87, 747
BstACI	GRCGYC	1 cut(s)	12
BstAPI	GCANNNNNTGC	1 cut(s)	1344
BstAUI	TGTACA	1 cut(s)	900
BstBI	TTCGAA	1 cut(s)	882
BstC8I	GCNNGC	4 cut(s)	150, 510, 861, 1345
BstDEI	CTNAG	5 cut(s)	504, 620, 1164, 1326, 1361
BstDSI	CCRYGG	1 cut(s)	637
BstENI	CCTNNNNNAGG	1 cut(s)	1247
BstF5I	GGATG	7 cut(s)	164, 478, 586, 739, 1005, 1142, 1192
BstH2I	RGCGCY	1 cut(s)	15
BstHHI	GCGC	1 cut(s)	14
BstKTI	GATC	8 cut(s)	256, 348, 550, 565, 769, 1233, 1238, 1359
BstMAI	GTCTC	2 cut(s)	366, 1440
BstMBI	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
BstMWI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1344
BstNI	CCWGG	5 cut(s)	54, 145, 302, 483, 971
BstNSI	RCATGY	1 cut(s)	1338
BstSCI	CCNGG	5 cut(s)	52, 143, 300, 481, 969
BstSFI	CTRYAG	1 cut(s)	1200
BstV1I	GCAGC	5 cut(s)	13, 16, 584, 686, 1186
BstV2I	GAAGAC	1 cut(s)	1090
BstX2I	RGATCY	2 cut(s)	1235, 1356
BstXI	CCANNNNNNTGG	1 cut(s)	160
BstYI	RGATCY	2 cut(s)	1235, 1356
BstZ17I	GTATAC	1 cut(s)	1332
BsuI	GTATCC	2 cut(s)	1117, 1270
BsuRI	GGCC	2 cut(s)	863, 1343
BtgI	CCRYGG	1 cut(s)	637
BtsCI	GGATG	7 cut(s)	164, 478, 586, 739, 1005, 1142, 1192
BtsIMutI	CAGTG	2 cut(s)	922, 1290
BveI	ACCTGC	1 cut(s)	196
Cac8I	GCNNGC	4 cut(s)	150, 510, 861, 1345
CfoI	GCGC	1 cut(s)	14
Cfr13I	GGNCC	3 cut(s)	122, 754, 1214
Csp6I	GTAC	3 cut(s)	393, 616, 901
CviAII	CATG	6 cut(s)	68, 638, 784, 997, 1194, 1335
CviQI	GTAC	3 cut(s)	393, 616, 901
DdeI	CTNAG	5 cut(s)	504, 620, 1164, 1326, 1361
DinI	GGCGCC	1 cut(s)	13
DpnI	GATC	8 cut(s)	255, 347, 549, 564, 768, 1232, 1237, 1358
DpnII	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
DrdI	GACNNNNNNGTC	1 cut(s)	1092
DriI	GACNNNNNGTC	1 cut(s)	358
DseDI	GACNNNNNNGTC	1 cut(s)	1092
Eam1104I	CTCTTC	2 cut(s)	87, 747
Eam1105I	GACNNNNNGTC	1 cut(s)	358
EarI	CTCTTC	2 cut(s)	87, 747
Ecl136II	GAGCTC	1 cut(s)	1370
Eco130I	CCWWGG	1 cut(s)	637
Eco147I	AGGCCT	1 cut(s)	1343
Eco24I	GRGCYC	1 cut(s)	1372
Eco47I	GGWCC	3 cut(s)	122, 754, 1214
Eco53kI	GAGCTC	1 cut(s)	1370
Eco57I	CTGAAG	4 cut(s)	307, 647, 688, 930
Eco88I	CYCGRG	1 cut(s)	846
EcoICRI	GAGCTC	1 cut(s)	1370
EcoNI	CCTNNNNNAGG	1 cut(s)	1247
EcoO109I	RGGNCCY	1 cut(s)	122
EcoRI	GAATTC	2 cut(s)	657, 1012
EcoRII	CCWGG	5 cut(s)	52, 143, 300, 481, 969
EcoT14I	CCWWGG	1 cut(s)	637
EcoT38I	GRGCYC	1 cut(s)	1372
EgeI	GGCGCC	1 cut(s)	13
EheI	GGCGCC	1 cut(s)	13
ErhI	CCWWGG	1 cut(s)	637
FaeI	CATG	6 cut(s)	71, 641, 787, 1000, 1197, 1338
FaqI	GGGAC	5 cut(s)	135, 298, 341, 504, 1328
FatI	CATG	6 cut(s)	67, 637, 783, 996, 1193, 1334
FbaI	TGATCA	2 cut(s)	345, 1230
FblI	GTMKAC	4 cut(s)	522, 813, 966, 1331
FokI	GGATG	7 cut(s)	151, 465, 573, 746, 992, 1149, 1199
FriOI	GRGCYC	1 cut(s)	1372
FspBI	CTAG	2 cut(s)	651, 1088
GlaI	GCGC	1 cut(s)	13
GsuI	CTGGAG	1 cut(s)	323
HaeII	RGCGCY	1 cut(s)	15
HaeIII	GGCC	2 cut(s)	863, 1343
HapII	CCGG	2 cut(s)	135, 856
HhaI	GCGC	1 cut(s)	14
Hin1I	GRCGYC	1 cut(s)	12
Hin1II	CATG	6 cut(s)	71, 641, 787, 1000, 1197, 1338
Hin6I	GCGC	1 cut(s)	12
HinP1I	GCGC	1 cut(s)	12
HincII	GTYRAC	2 cut(s)	1031, 1225
HindII	GTYRAC	2 cut(s)	1031, 1225
HindIII	AAGCTT	1 cut(s)	463
HinfI	GANTC	8 cut(s)	197, 329, 582, 779, 798, 895, 1166, 1324
HpaII	CCGG	2 cut(s)	135, 856
HphI	GGTGA	3 cut(s)	223, 626, 1361
Hpy166II	GTNNAC	9 cut(s)	211, 309, 523, 814, 967, 1031, 1225, 1332, 1403
Hpy188I	TCNGA	7 cut(s)	707, 831, 1101, 1136, 1186, 1235, 1410
Hpy188III	TCNNGA	6 cut(s)	135, 434, 1009, 1250, 1373, 1437
Hpy8I	GTNNAC	9 cut(s)	211, 309, 523, 814, 967, 1031, 1225, 1332, 1403
Hpy99I	CGWCG	3 cut(s)	182, 1098, 1457
HpyAV	CCTTC	4 cut(s)	97, 383, 440, 1101
HpyCH4III	ACNGT	4 cut(s)	289, 445, 1028, 1466
HpyCH4IV	ACGT	2 cut(s)	225, 1127
HpyCH4V	TGCA	7 cut(s)	205, 572, 836, 1160, 1179, 1202, 1338
HpyF10VI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1344
HpyF3I	CTNAG	5 cut(s)	504, 620, 1164, 1326, 1361
HpySE526I	ACGT	2 cut(s)	225, 1127
Hsp92I	GRCGYC	1 cut(s)	12
Hsp92II	CATG	6 cut(s)	71, 641, 787, 1000, 1197, 1338
HspAI	GCGC	1 cut(s)	12
KasI	GGCGCC	1 cut(s)	11
KflI	GGGWCCC	1 cut(s)	122
Kpn2I	TCCGGA	1 cut(s)	134
Ksp22I	TGATCA	2 cut(s)	345, 1230
Kzo9I	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
LmnI	GCTCC	1 cut(s)	1367
Lsp1109I	GCAGC	5 cut(s)	13, 16, 584, 686, 1186
LweI	GCATC	4 cut(s)	173, 724, 781, 1147
MaeI	CTAG	2 cut(s)	651, 1088
MaeII	ACGT	2 cut(s)	225, 1127
MaeIII	GTNAC	2 cut(s)	917, 1349
MalI	GATC	8 cut(s)	255, 347, 549, 564, 768, 1232, 1237, 1358
MboI	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
MfeI	CAATTG	2 cut(s)	567, 712
MflI	RGATCY	2 cut(s)	1235, 1356
MhlI	GDGCHC	1 cut(s)	1372
MluCI	AATT	9 cut(s)	397, 526, 567, 606, 657, 712, 819, 1012, 1270
Mly113I	GGCGCC	1 cut(s)	12
MlyI	GAGTC	5 cut(s)	323, 792, 904, 1175, 1318
MmeI	TCCRAC	1 cut(s)	1192
MnlI	CCTC	7 cut(s)	255, 279, 842, 993, 1198, 1305, 1358
MroI	TCCGGA	1 cut(s)	134
MseI	TTAA	4 cut(s)	552, 609, 956, 1046
MslI	CAYNNNNRTG	2 cut(s)	639, 1295
MspA1I	CMGCKG	3 cut(s)	26, 343, 1220
MspI	CCGG	2 cut(s)	135, 856
MspR9I	CCNGG	5 cut(s)	54, 145, 302, 483, 971
MunI	CAATTG	2 cut(s)	567, 712
Mva1269I	GAATGC	1 cut(s)	838
MvaI	CCWGG	5 cut(s)	54, 145, 302, 483, 971
MwoI	GCNNNNNNNGC	5 cut(s)	20, 23, 26, 29, 1344
NarI	GGCGCC	1 cut(s)	12
NcoI	CCATGG	1 cut(s)	637
NdeII	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
NlaIII	CATG	6 cut(s)	71, 641, 787, 1000, 1197, 1338
NlaIV	GGNNCC	7 cut(s)	13, 123, 124, 133, 243, 1266, 1358
NmeAIII	GCCGAG	1 cut(s)	1402
NmuCI	GTSAC	2 cut(s)	917, 1349
NspI	RCATGY	1 cut(s)	1338
NspV	TTCGAA	1 cut(s)	882
OliI	CACNNNNGTG	1 cut(s)	639
PaeR7I	CTCGAG	1 cut(s)	846
PceI	AGGCCT	1 cut(s)	1343
PcsI	WCGNNNNNNNCGW	1 cut(s)	1102
PctI	GAATGC	1 cut(s)	838
PfeI	GAWTC	3 cut(s)	197, 582, 779
PflMI	CCANNNNNTGG	1 cut(s)	684
PfoI	TCCNGGA	1 cut(s)	481
PleI	GAGTC	5 cut(s)	323, 792, 903, 1174, 1318
PluTI	GGCGCC	1 cut(s)	15
PpsI	GAGTC	5 cut(s)	323, 792, 903, 1174, 1318
PpuMI	RGGWCCY	1 cut(s)	122
PshBI	ATTAAT	1 cut(s)	609
Psp124BI	GAGCTC	1 cut(s)	1372
Psp5II	RGGWCCY	1 cut(s)	122
Psp6I	CCWGG	5 cut(s)	52, 143, 300, 481, 969
PspGI	CCWGG	5 cut(s)	52, 143, 300, 481, 969
PspN4I	GGNNCC	7 cut(s)	13, 123, 124, 133, 243, 1266, 1358
PspPI	GGNCC	3 cut(s)	122, 754, 1214
PspPPI	RGGWCCY	1 cut(s)	122
PspXI	VCTCGAGB	1 cut(s)	846
PstI	CTGCAG	1 cut(s)	1204
PsuI	RGATCY	2 cut(s)	1235, 1356
PvuII	CAGCTG	1 cut(s)	1220
RsaI	GTAC	3 cut(s)	394, 617, 902
RsaNI	GTAC	3 cut(s)	393, 616, 901
RseI	CAYNNNNRTG	2 cut(s)	639, 1295
SacI	GAGCTC	1 cut(s)	1372
SaqAI	TTAA	4 cut(s)	552, 609, 956, 1046
Sau3AI	GATC	8 cut(s)	253, 345, 547, 562, 766, 1230, 1235, 1356
Sau96I	GGNCC	3 cut(s)	122, 754, 1214
SchI	GAGTC	5 cut(s)	323, 792, 904, 1175, 1318
ScrFI	CCNGG	5 cut(s)	54, 145, 302, 483, 971
SduI	GDGCHC	1 cut(s)	1372
SfaNI	GCATC	4 cut(s)	173, 724, 781, 1147
SfcI	CTRYAG	1 cut(s)	1200
SfoI	GGCGCC	1 cut(s)	13
Sfr274I	CTCGAG	1 cut(s)	846
SfuI	TTCGAA	1 cut(s)	882
SinI	GGWCC	3 cut(s)	122, 754, 1214
SlaI	CTCGAG	1 cut(s)	846
SmiMI	CAYNNNNRTG	2 cut(s)	639, 1295
SmlI	CTYRAG	1 cut(s)	846
SmoI	CTYRAG	1 cut(s)	846
SpeI	ACTAGT	1 cut(s)	1087
Sse9I	AATT	9 cut(s)	397, 526, 567, 606, 657, 712, 819, 1012, 1270
SseBI	AGGCCT	1 cut(s)	1343
SsiI	CCGC	6 cut(s)	15, 18, 21, 24, 341, 1347
SspDI	GGCGCC	1 cut(s)	11
SspI	AATATT	1 cut(s)	1445
SspMI	CTAG	2 cut(s)	651, 1088
SstI	GAGCTC	1 cut(s)	1372
StuI	AGGCCT	1 cut(s)	1343
StyD4I	CCNGG	5 cut(s)	52, 143, 300, 481, 969
StyI	CCWWGG	1 cut(s)	637
TaaI	ACNGT	4 cut(s)	289, 445, 1028, 1466
TaiI	ACGT	2 cut(s)	228, 1130
TaqI	TCGA	7 cut(s)	180, 691, 847, 882, 1117, 1438, 1455
TaqII	GACCGA	1 cut(s)	771
TasI	AATT	9 cut(s)	397, 526, 567, 606, 657, 712, 819, 1012, 1270
TatI	WGTACW	1 cut(s)	900
TauI	GCSGC	4 cut(s)	17, 20, 23, 26
TfiI	GAWTC	3 cut(s)	197, 582, 779
Tru1I	TTAA	4 cut(s)	552, 609, 956, 1046
Tru9I	TTAA	4 cut(s)	552, 609, 956, 1046
TscAI	CASTG	2 cut(s)	922, 1297
TseFI	GTSAC	2 cut(s)	917, 1349
TseI	GCWGC	6 cut(s)	26, 29, 572, 674, 1199, 1459
Tsp45I	GTSAC	2 cut(s)	917, 1349
TspDTI	ATGAA	3 cut(s)	84, 822, 1313
TspGWI	ACGGA	1 cut(s)	1441
TspRI	CASTG	2 cut(s)	922, 1297
Van91I	CCANNNNNTGG	1 cut(s)	684
VpaK11BI	GGWCC	3 cut(s)	122, 754, 1214
VspI	ATTAAT	1 cut(s)	609
XagI	CCTNNNNNAGG	1 cut(s)	1247
XapI	RAATTY	3 cut(s)	657, 819, 1012
XceI	RCATGY	1 cut(s)	1338
XhoI	CTCGAG	1 cut(s)	846
XmiI	GTMKAC	4 cut(s)	522, 813, 966, 1331
XspI	CTAG	2 cut(s)	651, 1088

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.