Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004188

Physical Location & Seq

Genomic Coordinates Forward (+)

31989393 .. 32001341

Gene Structure 11949 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00025500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGAGGGTGGCGCCGCCTCCGCTGCTGCTATTGAAACGCAGAGAAACCCAGGACGACCAGCCCATGAAGAAGAAGAAGAAGAGAAGCCGAAGGTGGTGGTCATTATGGGACCCACAGGTTCCGGAAAGTCCAGGCTCGCCATTGATTTGGCATCCCACTTTCCCGTCGAAGTAATCAACGCCGATTCAATGCAGGTTTACAATGGTTTGGACGTTCTCACCAACAAGGTTCCTCTCCACGATCAAAAGGGAGTGCCTCATCATCTTCTGGGGACTGTAAGCCCAAACCTGGAGTTTACTGCTAAAGACTTCAGGGACTCTGCCATTCCGCTGATCAATGACATCTTGTCTCGCAACTGCCTTCCAGTCATAGTTGGGGGTACAAATTACTATATTCAGGCTCTTGTTAGTCCATTCCTTCTTGATGACACAGTAGAAGATATGGAAGAAAGCTTTTTAGATGACCATCCAGGAGTGGGACAACAACAGACTGAGCTGGCATTTGAAGTAGACAATTCCAGTTATAGTTATGACGATCTTAAAGTCATTGATCCAATTGCAGCAAACCGAATCCATCCAAATAATCACAGAAAAATTAATCAGTACCTTAGTATGTATGCTCACCATGGTGTTCTCCCTAGCAGAATTCTTCAGGGAAAGGCAGCCAAAAACTGGGGTCGAGTTGATAACTTCAGATACAGTTGCTGTTTTATATGTGTGGATGCTTCACTTCCTGTGCTGGACCGATTTGTGGATCAAAGAGTAGATTCCATGATAGATGCTGGACTCCTTGATGAAGTCTACGAAATTTTTTCTCGGAATGCAGATTATACTCGAGGTTTCCGGCAGGCCATTGGGGTTAGGGAGTTTGAAAGTTTTTTGAGTCTGTACATAACTGAAGCCAGTGACAAAGGAAATCATTTGATAGATGGGTCAATGTCCTTAAAGTCAGTAGACCTGGCTGATAAGATATTGAAAGAGAACATGAGGCTCATCCTGAATTCCTTGATTGACAGTCAACCCAACTCTGTGTTAAAAGAAGCTATTGAGAAAGTAAAACTGAACACCAGAAGACTAGTTCGTCGTCAGAAACGAAGGATAAATCGACTGGATACGTTGTTCGGATGGAACATACATTCCCTTGATGCAACTGAGTCCATTTTATGCAAATCGGATGATACATGGGCTGCAGAGGTTGTTGGACCAGCTGTTGACTTGATCAGATCGTTCCTTAATCAGGAAGCAACATTGGTGCCTAATTTGGATAACCCAAATAGCACTGAAATGAATATGATACAGAGGGACTTATGGACTCAGCATACATGCAAGGCCTGCGGTGACAGGATCCTTAGAGGAGCTCACGAGTGGGAACAACACAAGCAGGGTCGTGGACATCGGAAACGAGTTTCTCGGCTACAAAAGTCTCAAAAATATTTGTCCGTCGAGCAGCACAGTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009308 GO:0009451 GO:0009690 GO:0009691 GO:0009824 GO:0009987 GO:0010467 GO:0010817 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0034754 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:0090304 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

486

Amino Acids

54.75

Weight (kDa)

5.88

Isoelectric Point (pI)

38.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPPT	PF01715	65 - 365	8.9e-51	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27760
fragaria_vesca	FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650 FvH4_3g29650
malus_domestica	MD03G1136100.v1.1
prunus_persica	Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1 Prupe.6G120800_v2.0.a1
pyrus_communis	pycom03g09200
rosa_chinensis	RchiOBHm_Chr5g0055011
rosa_laevigata	RLG00000034956
rosa_multiflora	Rmu_sc0003653.1_g000029
rosa_roxburghii	Rroxscaffold_1G00025500
rosa_rugosa	Rorug05G0289900 Rorug05G0290000
rosa_samantha	Rh5AG360000 Rh5BG371000 Rh5CG393300 Rh5DG384800
rosa_wichuraiana	Rw5G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1080
Acc36I	ACCTGC	1 cut(s)	184
AccB1I	GGYRCC	2 cut(s)	11, 1252
AccB7I	CCANNNNNTGG	1 cut(s)	672
AccI	GTMKAC	3 cut(s)	510, 801, 954
AccIII	TCCGGA	1 cut(s)	122
AciI	CCGC	4 cut(s)	15, 21, 329, 1335
AclWI	GGATC	4 cut(s)	545, 762, 1339, 1352
AcsI	RAATTY	3 cut(s)	645, 807, 1000
AcuI	CTGAAG	4 cut(s)	295, 635, 676, 918
AcyI	GRCGYC	1 cut(s)	12
AfaI	GTAC	3 cut(s)	382, 605, 890
AfiI	CCNNNNNNNGG	5 cut(s)	289, 476, 672, 751, 1237
AgsI	TTSAA	5 cut(s)	35, 189, 506, 872, 976
AhdI	GACNNNNNGTC	1 cut(s)	346
AhlI	ACTAGT	1 cut(s)	1075
AjnI	CCWGG	5 cut(s)	49, 131, 288, 469, 957
AleI	CACNNNNGTG	1 cut(s)	627
AloI	GAACNNNNNNTCC	4 cut(s)	1103, 1121, 1135, 1153
AluBI	AGCT	5 cut(s)	453, 496, 1043, 1208, 1358
AluI	AGCT	5 cut(s)	453, 496, 1043, 1208, 1358
Alw21I	GWGCWC	1 cut(s)	1360
Alw26I	GTCTC	2 cut(s)	354, 1428
AlwI	GGATC	4 cut(s)	545, 762, 1339, 1352
AlwNI	CAGNNNCTG	1 cut(s)	705
Ama87I	CYCGRG	1 cut(s)	834
Aor13HI	TCCGGA	1 cut(s)	122
AoxI	GGCC	2 cut(s)	849, 1329
ApeKI	GCWGC	6 cut(s)	23, 26, 560, 662, 1187, 1447
ApoI	RAATTY	3 cut(s)	645, 807, 1000
AseI	ATTAAT	1 cut(s)	597
AspLEI	GCGC	1 cut(s)	14
AspS9I	GGNCC	3 cut(s)	110, 742, 1202
AsuHPI	GGTGA	3 cut(s)	211, 614, 1349
AvaI	CYCGRG	1 cut(s)	834
AvaII	GGWCC	3 cut(s)	110, 742, 1202
BamHI	GGATCC	1 cut(s)	1344
BanI	GGYRCC	2 cut(s)	11, 1252
BanII	GRGCYC	1 cut(s)	1360
BauI	CACGAG	1 cut(s)	1361
BbsI	GAAGAC	1 cut(s)	1078
Bbv12I	GWGCWC	1 cut(s)	1360
BbvI	GCAGC	5 cut(s)	10, 13, 572, 674, 1174
BccI	CCATC	4 cut(s)	474, 582, 923, 1119
BciT130I	CCWGG	5 cut(s)	51, 133, 290, 471, 959
BciVI	GTATCC	1 cut(s)	1105
BclI	TGATCA	2 cut(s)	333, 1218
BcoDI	GTCTC	2 cut(s)	354, 1428
BcuI	ACTAGT	1 cut(s)	1075
BfaI	CTAG	2 cut(s)	639, 1076
BfmI	CTRYAG	1 cut(s)	1188
BfoI	RGCGCY	1 cut(s)	15
BfuAI	ACCTGC	1 cut(s)	184
BfuI	GTATCC	1 cut(s)	1105
BisI	GCNGC	7 cut(s)	15, 24, 27, 561, 663, 1188, 1448
BlsI	GCNGC	7 cut(s)	16, 25, 28, 562, 664, 1189, 1449
Bme1390I	CCNGG	5 cut(s)	51, 133, 290, 471, 959
Bme18I	GGWCC	3 cut(s)	110, 742, 1202
BmeRI	GACNNNNNGTC	1 cut(s)	346
BmeT110I	CYCGRG	1 cut(s)	834
BmgT120I	GGNCC	3 cut(s)	110, 742, 1202
BmiI	GGNNCC	7 cut(s)	13, 111, 112, 121, 231, 1254, 1346
BmrFI	CCNGG	5 cut(s)	51, 133, 290, 471, 959
BmrI	ACTGGG	1 cut(s)	682
BmsI	GCATC	4 cut(s)	161, 712, 769, 1135
BmuI	ACTGGG	1 cut(s)	682
BpiI	GAAGAC	1 cut(s)	1078
BpmI	CTGGAG	1 cut(s)	311
BsaBI	GATNNNNATC	1 cut(s)	465
BsaHI	GRCGYC	1 cut(s)	12
BsaJI	CCNNGG	2 cut(s)	49, 625
BsaWI	WCCGGW	1 cut(s)	122
Bsc4I	CCNNNNNNNGG	5 cut(s)	289, 476, 672, 751, 1237
Bse1I	ACTGG	5 cut(s)	365, 519, 677, 903, 1113
Bse8I	GATNNNNATC	1 cut(s)	465
BseAI	TCCGGA	1 cut(s)	122
BseBI	CCWGG	5 cut(s)	51, 133, 290, 471, 959
BseDI	CCNNGG	2 cut(s)	49, 625
BseGI	GGATG	7 cut(s)	152, 466, 574, 727, 993, 1130, 1180
BseJI	GATNNNNATC	1 cut(s)	465
BseLI	CCNNNNNNNGG	5 cut(s)	289, 476, 672, 751, 1237
BseMII	CTCAG	3 cut(s)	483, 1143, 1328
BseNI	ACTGG	5 cut(s)	365, 519, 677, 903, 1113
BseRI	GAGGAG	1 cut(s)	1368
BseXI	GCAGC	5 cut(s)	10, 13, 572, 674, 1174
BshFI	GGCC	2 cut(s)	851, 1331
BshNI	GGYRCC	2 cut(s)	11, 1252
BsiHKAI	GWGCWC	1 cut(s)	1360
BsiHKCI	CYCGRG	1 cut(s)	834
BsiSI	CCGG	2 cut(s)	123, 844
BslFI	GGGAC	5 cut(s)	123, 286, 329, 492, 1316
BslI	CCNNNNNNNGG	5 cut(s)	289, 476, 672, 751, 1237
BsmAI	GTCTC	2 cut(s)	354, 1428
BsmFI	GGGAC	5 cut(s)	123, 286, 329, 492, 1316
BsmI	GAATGC	1 cut(s)	826
BsnI	GGCC	2 cut(s)	851, 1331
BsoBI	CYCGRG	1 cut(s)	834
Bsp1286I	GDGCHC	1 cut(s)	1360
Bsp13I	TCCGGA	1 cut(s)	122
Bsp1407I	TGTACA	1 cut(s)	888
Bsp143I	GATC	8 cut(s)	241, 333, 535, 550, 754, 1218, 1223, 1344
Bsp19I	CCATGG	1 cut(s)	625
BspACI	CCGC	4 cut(s)	15, 21, 329, 1335
BspANI	GGCC	2 cut(s)	851, 1331
BspCNI	CTCAG	3 cut(s)	484, 1144, 1327
BspEI	TCCGGA	1 cut(s)	122
BspLI	GGNNCC	7 cut(s)	13, 111, 112, 121, 231, 1254, 1346
BspMAI	CTGCAG	1 cut(s)	1192
BspMI	ACCTGC	1 cut(s)	184
BspPI	GGATC	4 cut(s)	545, 762, 1339, 1352
BspT107I	GGYRCC	2 cut(s)	11, 1252
BsrGI	TGTACA	1 cut(s)	888
BsrI	ACTGG	5 cut(s)	365, 519, 677, 903, 1113
BssECI	CCNNGG	2 cut(s)	49, 625
BssMI	GATC	8 cut(s)	241, 333, 535, 550, 754, 1218, 1223, 1344
BssNI	GRCGYC	1 cut(s)	12
BssSI	CACGAG	1 cut(s)	1361
BssT1I	CCWWGG	1 cut(s)	625
Bst2BI	CACGAG	1 cut(s)	1361
Bst2UI	CCWGG	5 cut(s)	51, 133, 290, 471, 959
Bst4CI	ACNGT	5 cut(s)	277, 433, 701, 1016, 1454
Bst6I	CTCTTC	1 cut(s)	75
BstACI	GRCGYC	1 cut(s)	12
BstAPI	GCANNNNNTGC	1 cut(s)	1332
BstAUI	TGTACA	1 cut(s)	888
BstC8I	GCNNGC	4 cut(s)	138, 498, 849, 1333
BstDEI	CTNAG	5 cut(s)	492, 608, 1152, 1314, 1349
BstDSI	CCRYGG	1 cut(s)	625
BstENI	CCTNNNNNAGG	1 cut(s)	1235
BstF5I	GGATG	7 cut(s)	152, 466, 574, 727, 993, 1130, 1180
BstH2I	RGCGCY	1 cut(s)	15
BstHHI	GCGC	1 cut(s)	14
BstKTI	GATC	8 cut(s)	244, 336, 538, 553, 757, 1221, 1226, 1347
BstMAI	GTCTC	2 cut(s)	354, 1428
BstMBI	GATC	8 cut(s)	241, 333, 535, 550, 754, 1218, 1223, 1344
BstMWI	GCNNNNNNNGC	3 cut(s)	20, 23, 1332
BstNI	CCWGG	5 cut(s)	51, 133, 290, 471, 959
BstNSI	RCATGY	1 cut(s)	1326
BstSCI	CCNGG	5 cut(s)	49, 131, 288, 469, 957
BstSFI	CTRYAG	1 cut(s)	1188
BstV1I	GCAGC	5 cut(s)	10, 13, 572, 674, 1174
BstV2I	GAAGAC	1 cut(s)	1078
BstX2I	RGATCY	1 cut(s)	1344
BstXI	CCANNNNNNTGG	1 cut(s)	148
BstYI	RGATCY	1 cut(s)	1344
BsuI	GTATCC	1 cut(s)	1105
BsuRI	GGCC	2 cut(s)	851, 1331
BtgI	CCRYGG	1 cut(s)	625
BtsCI	GGATG	7 cut(s)	152, 466, 574, 727, 993, 1130, 1180
BtsIMutI	CAGTG	2 cut(s)	910, 1278
BveI	ACCTGC	1 cut(s)	184
Cac8I	GCNNGC	4 cut(s)	138, 498, 849, 1333
CaiI	CAGNNNCTG	1 cut(s)	705
CfoI	GCGC	1 cut(s)	14
Cfr13I	GGNCC	3 cut(s)	110, 742, 1202
Csp6I	GTAC	3 cut(s)	381, 604, 889
CviAII	CATG	6 cut(s)	65, 626, 772, 985, 1182, 1323
CviQI	GTAC	3 cut(s)	381, 604, 889
DdeI	CTNAG	5 cut(s)	492, 608, 1152, 1314, 1349
DinI	GGCGCC	1 cut(s)	13
DpnI	GATC	8 cut(s)	243, 335, 537, 552, 756, 1220, 1225, 1346
DpnII	GATC	8 cut(s)	241, 333, 535, 550, 754, 1218, 1223, 1344
DrdI	GACNNNNNNGTC	1 cut(s)	1080
DriI	GACNNNNNGTC	1 cut(s)	346
DseDI	GACNNNNNNGTC	1 cut(s)	1080
Eam1104I	CTCTTC	1 cut(s)	75
Eam1105I	GACNNNNNGTC	1 cut(s)	346
EarI	CTCTTC	1 cut(s)	75
Ecl136II	GAGCTC	1 cut(s)	1358
Eco130I	CCWWGG	1 cut(s)	625
Eco147I	AGGCCT	1 cut(s)	1331
Eco24I	GRGCYC	1 cut(s)	1360
Eco47I	GGWCC	3 cut(s)	110, 742, 1202
Eco53kI	GAGCTC	1 cut(s)	1358
Eco57I	CTGAAG	4 cut(s)	295, 635, 676, 918
Eco88I	CYCGRG	1 cut(s)	834
EcoICRI	GAGCTC	1 cut(s)	1358
EcoNI	CCTNNNNNAGG	1 cut(s)	1235
EcoO109I	RGGNCCY	1 cut(s)	110
EcoRI	GAATTC	2 cut(s)	645, 1000
EcoRII	CCWGG	5 cut(s)	49, 131, 288, 469, 957
EcoT14I	CCWWGG	1 cut(s)	625
EcoT38I	GRGCYC	1 cut(s)	1360
EgeI	GGCGCC	1 cut(s)	13
EheI	GGCGCC	1 cut(s)	13
ErhI	CCWWGG	1 cut(s)	625
FaeI	CATG	6 cut(s)	68, 629, 775, 988, 1185, 1326
FaqI	GGGAC	5 cut(s)	123, 286, 329, 492, 1316
FatI	CATG	6 cut(s)	64, 625, 771, 984, 1181, 1322
FbaI	TGATCA	2 cut(s)	333, 1218
FblI	GTMKAC	3 cut(s)	510, 801, 954
Fnu4HI	GCNGC	7 cut(s)	15, 24, 27, 561, 663, 1188, 1448
FokI	GGATG	7 cut(s)	139, 453, 561, 734, 980, 1137, 1187
FriOI	GRGCYC	1 cut(s)	1360
Fsp4HI	GCNGC	7 cut(s)	15, 24, 27, 561, 663, 1188, 1448
FspBI	CTAG	2 cut(s)	639, 1076
GlaI	GCGC	1 cut(s)	13
GluI	GCNGC	7 cut(s)	15, 24, 27, 561, 663, 1188, 1448
GsuI	CTGGAG	1 cut(s)	311
HaeII	RGCGCY	1 cut(s)	15
HaeIII	GGCC	2 cut(s)	851, 1331
HapII	CCGG	2 cut(s)	123, 844
HhaI	GCGC	1 cut(s)	14
Hin1I	GRCGYC	1 cut(s)	12
Hin1II	CATG	6 cut(s)	68, 629, 775, 988, 1185, 1326
Hin6I	GCGC	1 cut(s)	12
HinP1I	GCGC	1 cut(s)	12
HincII	GTYRAC	2 cut(s)	1019, 1213
HindII	GTYRAC	2 cut(s)	1019, 1213
HindIII	AAGCTT	1 cut(s)	451
HinfI	GANTC	8 cut(s)	185, 317, 570, 767, 786, 883, 1154, 1312
HpaII	CCGG	2 cut(s)	123, 844
HphI	GGTGA	3 cut(s)	211, 614, 1349
Hpy166II	GTNNAC	8 cut(s)	199, 297, 511, 802, 955, 1019, 1213, 1391
Hpy188I	TCNGA	7 cut(s)	695, 819, 1089, 1124, 1174, 1223, 1398
Hpy188III	TCNNGA	5 cut(s)	123, 422, 997, 1238, 1361
Hpy8I	GTNNAC	8 cut(s)	199, 297, 511, 802, 955, 1019, 1213, 1391
Hpy99I	CGWCG	3 cut(s)	170, 1086, 1445
HpyAV	CCTTC	4 cut(s)	85, 371, 428, 1089
HpyCH4III	ACNGT	5 cut(s)	277, 433, 701, 1016, 1454
HpyCH4IV	ACGT	2 cut(s)	213, 1115
HpyCH4V	TGCA	7 cut(s)	193, 560, 824, 1148, 1167, 1190, 1326
HpyF10VI	GCNNNNNNNGC	3 cut(s)	20, 23, 1332
HpyF3I	CTNAG	5 cut(s)	492, 608, 1152, 1314, 1349
HpySE526I	ACGT	2 cut(s)	213, 1115
Hsp92I	GRCGYC	1 cut(s)	12
Hsp92II	CATG	6 cut(s)	68, 629, 775, 988, 1185, 1326
HspAI	GCGC	1 cut(s)	12
KasI	GGCGCC	1 cut(s)	11
KflI	GGGWCCC	1 cut(s)	110
Kpn2I	TCCGGA	1 cut(s)	122
Ksp22I	TGATCA	2 cut(s)	333, 1218
Kzo9I	GATC	8 cut(s)	241, 333, 535, 550, 754, 1218, 1223, 1344
LmnI	GCTCC	1 cut(s)	1355
Lsp1109I	GCAGC	5 cut(s)	10, 13, 572, 674, 1174
LweI	GCATC	4 cut(s)	161, 712, 769, 1135
MaeI	CTAG	2 cut(s)	639, 1076
MaeII	ACGT	2 cut(s)	213, 1115
MaeIII	GTNAC	2 cut(s)	905, 1337
MalI	GATC	8 cut(s)	243, 335, 537, 552, 756, 1220, 1225, 1346
MboI	GATC	8 cut(s)	241, 333, 535, 550, 754, 1218, 1223, 1344
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	1 cut(s)	1344
MhlI	GDGCHC	1 cut(s)	1360
MluCI	AATT	8 cut(s)	385, 514, 555, 594, 645, 807, 1000, 1258
Mly113I	GGCGCC	1 cut(s)	12
MlyI	GAGTC	5 cut(s)	311, 780, 892, 1163, 1306
MmeI	TCCRAC	1 cut(s)	1180
MnlI	CCTC	8 cut(s)	28, 243, 267, 830, 981, 1186, 1293, 1346
MroI	TCCGGA	1 cut(s)	122
MseI	TTAA	5 cut(s)	540, 597, 944, 1034, 1233
MslI	CAYNNNNRTG	2 cut(s)	627, 1283
MspA1I	CMGCKG	3 cut(s)	23, 331, 1208
MspI	CCGG	2 cut(s)	123, 844
MspR9I	CCNGG	5 cut(s)	51, 133, 290, 471, 959
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	826
MvaI	CCWGG	5 cut(s)	51, 133, 290, 471, 959
MwoI	GCNNNNNNNGC	3 cut(s)	20, 23, 1332
NarI	GGCGCC	1 cut(s)	12
NcoI	CCATGG	1 cut(s)	625
NdeII	GATC	8 cut(s)	241, 333, 535, 550, 754, 1218, 1223, 1344
NlaIII	CATG	6 cut(s)	68, 629, 775, 988, 1185, 1326
NlaIV	GGNNCC	7 cut(s)	13, 111, 112, 121, 231, 1254, 1346
NmeAIII	GCCGAG	1 cut(s)	1390
NmuCI	GTSAC	2 cut(s)	905, 1337
NspI	RCATGY	1 cut(s)	1326
OliI	CACNNNNGTG	1 cut(s)	627
PaeR7I	CTCGAG	1 cut(s)	834
PceI	AGGCCT	1 cut(s)	1331
PcsI	WCGNNNNNNNCGW	1 cut(s)	1090
PctI	GAATGC	1 cut(s)	826
PfeI	GAWTC	3 cut(s)	185, 570, 767
PflMI	CCANNNNNTGG	1 cut(s)	672
PfoI	TCCNGGA	1 cut(s)	469
PkrI	GCNGC	7 cut(s)	16, 25, 28, 562, 664, 1189, 1449
PleI	GAGTC	5 cut(s)	311, 780, 891, 1162, 1306
PluTI	GGCGCC	1 cut(s)	15
PpsI	GAGTC	5 cut(s)	311, 780, 891, 1162, 1306
PpuMI	RGGWCCY	1 cut(s)	110
PshBI	ATTAAT	1 cut(s)	597
Psp124BI	GAGCTC	1 cut(s)	1360
Psp5II	RGGWCCY	1 cut(s)	110
Psp6I	CCWGG	5 cut(s)	49, 131, 288, 469, 957
PspGI	CCWGG	5 cut(s)	49, 131, 288, 469, 957
PspN4I	GGNNCC	7 cut(s)	13, 111, 112, 121, 231, 1254, 1346
PspPI	GGNCC	3 cut(s)	110, 742, 1202
PspPPI	RGGWCCY	1 cut(s)	110
PspXI	VCTCGAGB	1 cut(s)	834
PstI	CTGCAG	1 cut(s)	1192
PstNI	CAGNNNCTG	1 cut(s)	705
PsuI	RGATCY	1 cut(s)	1344
PvuII	CAGCTG	1 cut(s)	1208
RsaI	GTAC	3 cut(s)	382, 605, 890
RsaNI	GTAC	3 cut(s)	381, 604, 889
RseI	CAYNNNNRTG	2 cut(s)	627, 1283
SacI	GAGCTC	1 cut(s)	1360
SaqAI	TTAA	5 cut(s)	540, 597, 944, 1034, 1233
SatI	GCNGC	7 cut(s)	15, 24, 27, 561, 663, 1188, 1448
Sau3AI	GATC	8 cut(s)	241, 333, 535, 550, 754, 1218, 1223, 1344
Sau96I	GGNCC	3 cut(s)	110, 742, 1202
SchI	GAGTC	5 cut(s)	311, 780, 892, 1163, 1306
ScrFI	CCNGG	5 cut(s)	51, 133, 290, 471, 959
SduI	GDGCHC	1 cut(s)	1360
SfaNI	GCATC	4 cut(s)	161, 712, 769, 1135
SfcI	CTRYAG	1 cut(s)	1188
SfoI	GGCGCC	1 cut(s)	13
Sfr274I	CTCGAG	1 cut(s)	834
SinI	GGWCC	3 cut(s)	110, 742, 1202
SlaI	CTCGAG	1 cut(s)	834
SmiMI	CAYNNNNRTG	2 cut(s)	627, 1283
SmlI	CTYRAG	1 cut(s)	834
SmoI	CTYRAG	1 cut(s)	834
SpeI	ACTAGT	1 cut(s)	1075
Sse9I	AATT	8 cut(s)	385, 514, 555, 594, 645, 807, 1000, 1258
SseBI	AGGCCT	1 cut(s)	1331
SsiI	CCGC	4 cut(s)	15, 21, 329, 1335
SspDI	GGCGCC	1 cut(s)	11
SspI	AATATT	1 cut(s)	1433
SspMI	CTAG	2 cut(s)	639, 1076
SstI	GAGCTC	1 cut(s)	1360
StuI	AGGCCT	1 cut(s)	1331
StyD4I	CCNGG	5 cut(s)	49, 131, 288, 469, 957
StyI	CCWWGG	1 cut(s)	625
TaaI	ACNGT	5 cut(s)	277, 433, 701, 1016, 1454
TaiI	ACGT	2 cut(s)	216, 1118
TaqI	TCGA	5 cut(s)	168, 679, 835, 1105, 1443
TaqII	GACCGA	1 cut(s)	759
TasI	AATT	8 cut(s)	385, 514, 555, 594, 645, 807, 1000, 1258
TatI	WGTACW	1 cut(s)	888
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	3 cut(s)	185, 570, 767
Tru1I	TTAA	5 cut(s)	540, 597, 944, 1034, 1233
Tru9I	TTAA	5 cut(s)	540, 597, 944, 1034, 1233
TscAI	CASTG	2 cut(s)	910, 1285
TseFI	GTSAC	2 cut(s)	905, 1337
TseI	GCWGC	6 cut(s)	23, 26, 560, 662, 1187, 1447
Tsp45I	GTSAC	2 cut(s)	905, 1337
TspDTI	ATGAA	3 cut(s)	81, 810, 1301
TspGWI	ACGGA	1 cut(s)	1429
TspRI	CASTG	2 cut(s)	910, 1285
Van91I	CCANNNNNTGG	1 cut(s)	672
VpaK11BI	GGWCC	3 cut(s)	110, 742, 1202
VspI	ATTAAT	1 cut(s)	597
XagI	CCTNNNNNAGG	1 cut(s)	1235
XapI	RAATTY	3 cut(s)	645, 807, 1000
XceI	RCATGY	1 cut(s)	1326
XhoI	CTCGAG	1 cut(s)	834
XmiI	GTMKAC	3 cut(s)	510, 801, 954
XspI	CTAG	2 cut(s)	639, 1076

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.