FvH4_3g36942

Serine arginine repetitive matrix protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0007711
Physical Location & Seq
Forward (+)
31640334 .. 31646585
6252 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g36942.t2

Sequence Viewer

Length: 2568 bp
ATGTCGGGCGGGTTCTTCAGGGGTACGTCGGCTGATCAGGACACGAGGTTTTCCAACAAGCAAGCCAAGCTGATGAAATCGCAGAAATTCGCACCGGAATTGGAACATCTGGTGGACATGACGAAGGTGAACATGGATGTTATGCGTCCATGGATTGCTACCCGGGTAACTGAGCTTCTCGGGTTTGAAGATGAAGTTCTTATCAACTTCATTTATGGTCTTTTAGATGTCAAGGAAGCGAATGGAAAGGAGATTCAAATTTCGCTGACTGGATTTATGGAGAAAAATACAGTTAAGTTTATGAAAGAGCTCTGGACTCATCTTCTCAGTGCACAAAATAATGCCAGTGGTGTCCCTCAACAGTTCTTGGATGCCAAACAAGAAGAAGCACGAAAAAAGAAGGAGGAGGCAGATGCAATTGAAACTCAGAGAAAGAAAGATAAGGAGGTGCTTGAACTAGAGAGATCAAAGAAGATGGAAGGAGGGGTTGATAAGAAACCAAGCAATGGTGAGGCGGGGCCAAGTTCATACCGTGTGTCCCCAAGGGCTTCAAGTGACCGTCCTGATGATGAGAGAGGGACTGGCAACAGGAATGGTGTGACAGCAAGGAACAGGGTTTCTAGATCTCCACTGCCTCCGATAGATTCAGCAGATTCGGACTCATCTTTGTCCCCTCGGTTTGGTGAAAGAGACGGATCAAGCAGCGTATCTAAGTCACCAGAAGCACGGGGACGGTCCATTTCTTCCGAAAGGGGAAGGGGTTATCGCTCTCCACAAAGACGACCGATTTCATCTAGGAGGCGGTCACCTGAGGGATCACTTTCCCCAAGAGGAAGATCACCTCATTCCAGGAGAGGATCACGATCAAATTCACCGCACAGATCACGCTCTCCTGTATTGCGTCGAGTTCGTTCTCCCTATCAGCGTAGATCACGTTCTCCTGGACGTCGCAGGTCACCTCCACCTTTCCGAAGCCGCAGATCACCCTCACCTTTTCGAGGCCGTAGATCACCCTATCGGCGCCGAAGATCACCCTCACCTCTCCGCCGCCGCAGACCCTCACCTGTTCGTAATCGCAGATCACCATCACCTATCCGGCGTCGCAGGTCACCCTCCCCTCTGCGGCGACGGTTGTCACCTATTGGACGGCGTCGCAGGTCCCCCTCACCCGCACGTCGTAGGTCACCCTCACCTGTTCGACCATCGTATCGAAGATCATCACGGAACAGGTATGCATCTCCAGTGCGACGGAGGTCACCAGTTCGGAGTGGCAGGAGGTCCCCACCTCTTCGACGTAGGTCTCCTTCGCCTTCTGATCGAAGTTCTTCATCTCCTGTTCAGCGTGATTCCCCTTCACCAGTCAAGAGAACAACAACGCAGAAGAGATCTCCCCTGCAATCCCACCAAGAAAGAACAAGGTCTGTTGAGAACTTGTCCCCAGCTTCACAACAATCCTCTGGTTCCGAAGGGTCACTGCAGAGGGAATCGAAGAATGGGAATAATTACCACAAAAGAGTTCCAGCTTTGTCGCCATCACCACAGAAGTCTCCTCTAAATTTAGAACCTTCACCAGGTGCAAGGAGTTTGAGGGAAAAGAGGAGAAGATTGTCCAGTCCATCTGAAAGTCCTGCGAAACGACCAAAGGAGCAAATTGCTCGTTATGGTAGCTCAAGTCCTTCAAGGAAACCAAGAGAACAAAAACTTCGACGTGACAGTCCCAAAGAATGTGAAGAAGAGGATGATGCTGATCACAGACCCAAGTCCTTGGAGAGAAGATCCAGAGATACATCAGGGATCAGTAAGCAGATAATTTCTCCTGCTAAGATTCCTAACAAGGAAGAGTACTCTCCTGAAAGAGTAGTATCTGGTCAAAGGTTTACTGAATCTCAAAGCCATTTGGATAAGATTGAAAGCAGAAACCAAGAGCAGGAGATGAAGAGTGGAAAATCTTCTGGGAGGGGTTCAAACATGCCAATTGTCTATAAAGACTCTCTGCCAGGTGAGACACAAAGGGCATCAAATCCTGGTGAAGGGAAAAAAGCTGATGATAAGAACCGCTCTCATTCAAAGAATACCAAGGATAGCGAACGACATCGTAAACCTGGATCTTTACACTCATCTGTTGAAATGGTTGATCATAGTAACCATAGTGGTGGTTTGGATTCTGGTTCTGAGGACAGTGACAAAGGCAGAAGCGGAGACAAGGAAAAGAGAAAGAATAAGAGATCAGAGAAGCAAGAAGTGACTTCAGATGATGATGACAGTTATGATTCTGCAATAGAAGACAGGAAGGAGGCTAAAAAGAGGAGGAAAGAGGAAAAGAGGTTGCGGAAGGAGAAGAAGCGCCGGAGGCGTGAGGAGCGTCGACGCAGAAGAGAAGAACGTCGTGCCGAGAAACAGAAAGTGAAGAACTCCAGTGATGCTTCTGGTTCAGATGGTGAACATGTGACCGGAAGGGGGTTTCATTCAAGTGACAATGAAGAAGAGGCTGTTCAGAAGAAACTTGAGATTGAATTGCGCAAGAAGGCTCTCGAATCACTCAAAGCAAAGAAGGGCATCAGTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 map03013 map03015
Pfam Domains
Protein Families
PWI

Protein Analysis

856

Amino Acids

97.45

Weight (kDa)

11.17

Isoelectric Point (pI)

121.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWI PF01480 46 - 115 1.2e-26 PWI domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1713
AatII GACGTC 1 cut(s) 949
Acc16I TGCGCA 1 cut(s) 2519
Acc36I ACCTGC 3 cut(s) 942, 1095, 1146
AccB1I GGYRCC 1 cut(s) 1020
AccB7I CCANNNNNTGG 1 cut(s) 506
AccBSI CCGCTC 1 cut(s) 2058
AccI GTMKAC 1 cut(s) 2365
AclWI GGATC 6 cut(s) 703, 823, 865, 1770, 1802, 2113
AcsI RAATTY 4 cut(s) 86, 258, 868, 1555
AcuI CTGAAG 1 cut(s) 2232
AcyI GRCGYC 4 cut(s) 946, 1021, 1099, 1150
AdeI CACNNNGTG 1 cut(s) 1574
AfaI GTAC 2 cut(s) 25, 1844
AfiI CCNNNNNNNGG 8 cut(s) 506, 680, 998, 1122, 1571, 1927, 2030, 2457
AflIII ACRYGT 1 cut(s) 2443
AjiI CACGTC 2 cut(s) 1175, 1709
AjnI CCWGG 6 cut(s) 848, 940, 1570, 1996, 2023, 2101
AluBI AGCT 7 cut(s) 70, 175, 310, 1442, 1523, 1668, 2042
AluI AGCT 7 cut(s) 70, 175, 310, 1442, 1523, 1668, 2042
Alw21I GWGCWC 2 cut(s) 312, 334
Alw26I GTCTC 5 cut(s) 684, 1305, 1551, 1997, 2193
Alw44I GTGCAC 1 cut(s) 330
AlwI GGATC 6 cut(s) 703, 823, 865, 1770, 1802, 2113
Ama87I CYCGRG 2 cut(s) 162, 179
AoxI GGCC 2 cut(s) 518, 1000
ApaLI GTGCAC 1 cut(s) 330
ApeKI GCWGC 1 cut(s) 702
ApoI RAATTY 4 cut(s) 86, 258, 868, 1555
Asp700I GAANNNNTTC 2 cut(s) 1324, 1948
AspLEI GCGC 3 cut(s) 1023, 2346, 2520
AspS9I GGNCC 4 cut(s) 518, 735, 1158, 1278
AsuC2I CCSGG 2 cut(s) 163, 164
AvaI CYCGRG 2 cut(s) 162, 179
AvaII GGWCC 3 cut(s) 735, 1158, 1278
AxyI CCTNAGG 1 cut(s) 810
BaeGI GKGCMC 1 cut(s) 334
BaeI ACNNNNGTAYC 2 cut(s) 1190, 1223
BanI GGYRCC 1 cut(s) 1020
BanII GRGCYC 1 cut(s) 312
BarI GAAGNNNNNNTAC 4 cut(s) 159, 191, 1288, 1320
BauI CACGAG 1 cut(s) 43
BbsI GAAGAC 1 cut(s) 2289
Bbv12I GWGCWC 2 cut(s) 312, 334
BbvI GCAGC 1 cut(s) 714
BccI CCATC 6 cut(s) 469, 1093, 1210, 1540, 1624, 2429
BceAI ACGGC 2 cut(s) 987, 1163
BcgI CGANNNNNNTGC 2 cut(s) 1637, 1671
BciT130I CCWGG 6 cut(s) 850, 942, 1572, 1998, 2025, 2103
BclI TGATCA 3 cut(s) 34, 1747, 2134
BcnI CCSGG 2 cut(s) 163, 164
BcoDI GTCTC 5 cut(s) 684, 1305, 1551, 1997, 2193
BfaI CTAG 3 cut(s) 458, 621, 795
BfmI CTRYAG 1 cut(s) 1475
BfoI RGCGCY 2 cut(s) 1024, 2347
BfuAI ACCTGC 3 cut(s) 942, 1095, 1146
BglII AGATCT 2 cut(s) 623, 1385
BisI GCNGC 5 cut(s) 703, 976, 1048, 1051, 1124
BlsI GCNGC 5 cut(s) 704, 977, 1049, 1052, 1125
BmcAI AGTACT 1 cut(s) 1844
Bme1390I CCNGG 8 cut(s) 163, 164, 850, 942, 1572, 1998, 2025, 2103
Bme18I GGWCC 3 cut(s) 735, 1158, 1278
BmeT110I CYCGRG 2 cut(s) 162, 179
BmgBI CACGTC 2 cut(s) 1175, 1709
BmgT120I GGNCC 4 cut(s) 518, 735, 1158, 1278
BmiI GGNNCC 5 cut(s) 519, 1022, 1160, 1280, 1462
BmrFI CCNGG 8 cut(s) 163, 164, 850, 942, 1572, 1998, 2025, 2103
BmsI GCATC 6 cut(s) 361, 403, 1244, 1732, 2024, 2410
BoxI GACNNNNGTC 4 cut(s) 1132, 1252, 1297, 1759
BpiI GAAGAC 1 cut(s) 2289
BpmI CTGGAG 2 cut(s) 1224, 2398
BpuEI CTTGAG 2 cut(s) 1654, 2525
BpuMI CCSGG 2 cut(s) 163, 164
BsaBI GATNNNNATC 3 cut(s) 862, 1084, 1746
BsaHI GRCGYC 4 cut(s) 946, 1021, 1099, 1150
BsaI GGTCTC 1 cut(s) 1305
BsaJI CCNNGG 6 cut(s) 149, 162, 542, 674, 1764, 2076
BsaWI WCCGGW 2 cut(s) 94, 2450
Bsc4I CCNNNNNNNGG 8 cut(s) 506, 680, 998, 1122, 1571, 1927, 2030, 2457
Bse1I ACTGG 8 cut(s) 274, 345, 586, 1241, 1259, 1358, 1611, 2415
Bse21I CCTNAGG 1 cut(s) 810
Bse3DI GCAATG 1 cut(s) 511
Bse8I GATNNNNATC 3 cut(s) 862, 1084, 1746
BseBI CCWGG 6 cut(s) 850, 942, 1572, 1998, 2025, 2103
BseDI CCNNGG 6 cut(s) 149, 162, 542, 674, 1764, 2076
BseGI GGATG 3 cut(s) 142, 376, 1744
BseJI GATNNNNATC 3 cut(s) 862, 1084, 1746
BseLI CCNNNNNNNGG 8 cut(s) 506, 680, 998, 1122, 1571, 1927, 2030, 2457
BseMI GCAATG 1 cut(s) 511
BseMII CTCAG 5 cut(s) 162, 340, 440, 801, 2163
BseNI ACTGG 8 cut(s) 274, 345, 586, 1241, 1259, 1358, 1611, 2415
BseRI GAGGAG 5 cut(s) 419, 1539, 1612, 2320, 2372
BseSI GKGCMC 1 cut(s) 334
BseXI GCAGC 1 cut(s) 714
BseYI CCCAGC 1 cut(s) 1438
Bsh1285I CGRYCG 1 cut(s) 785
BshFI GGCC 2 cut(s) 520, 1002
BshNI GGYRCC 1 cut(s) 1020
BsiEI CGRYCG 1 cut(s) 785
BsiHKAI GWGCWC 2 cut(s) 312, 334
BsiHKCI CYCGRG 2 cut(s) 162, 179
BsiSI CCGG 5 cut(s) 95, 163, 1096, 2347, 2451
BslFI GGGAC 9 cut(s) 338, 523, 592, 655, 744, 1144, 1264, 1420, 1701
BslI CCNNNNNNNGG 8 cut(s) 506, 680, 998, 1122, 1571, 1927, 2030, 2457
BsmAI GTCTC 5 cut(s) 684, 1305, 1551, 1997, 2193
BsmBI CGTCTC 1 cut(s) 684
BsmFI GGGAC 9 cut(s) 338, 523, 592, 655, 744, 1144, 1264, 1420, 1701
BsnI GGCC 2 cut(s) 520, 1002
Bso31I GGTCTC 1 cut(s) 1305
BsoBI CYCGRG 2 cut(s) 162, 179
Bsp1286I GDGCHC 2 cut(s) 312, 334
Bsp19I CCATGG 1 cut(s) 149
BspANI GGCC 2 cut(s) 520, 1002
BspCNI CTCAG 5 cut(s) 163, 339, 439, 802, 2164
BspLI GGNNCC 5 cut(s) 519, 1022, 1160, 1280, 1462
BspMAI CTGCAG 1 cut(s) 1479
BspMI ACCTGC 3 cut(s) 942, 1095, 1146
BspPI GGATC 6 cut(s) 703, 823, 865, 1770, 1802, 2113
BspT107I GGYRCC 1 cut(s) 1020
BspTNI GGTCTC 1 cut(s) 1305
BsrBI CCGCTC 1 cut(s) 2058
BsrDI GCAATG 1 cut(s) 511
BsrI ACTGG 8 cut(s) 274, 345, 586, 1241, 1259, 1358, 1611, 2415
BssECI CCNNGG 6 cut(s) 149, 162, 542, 674, 1764, 2076
BssNI GRCGYC 4 cut(s) 946, 1021, 1099, 1150
BssSI CACGAG 1 cut(s) 43
BssT1I CCWWGG 4 cut(s) 149, 542, 1764, 2076
Bst2BI CACGAG 1 cut(s) 43
Bst2UI CCWGG 6 cut(s) 850, 942, 1572, 1998, 2025, 2103
Bst4CI ACNGT 9 cut(s) 292, 363, 533, 560, 735, 1131, 1715, 2180, 2264
Bst6I CTCTTC 7 cut(s) 1293, 1376, 1728, 1833, 1931, 2368, 2478
BstACI GRCGYC 4 cut(s) 946, 1021, 1099, 1150
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 7 cut(s) 171, 326, 426, 711, 810, 1821, 2172
BstDSI CCRYGG 1 cut(s) 149
BstEII GGTNACC 5 cut(s) 804, 954, 1107, 1182, 1254
BstENI CCTNNNNNAGG 3 cut(s) 996, 1569, 2028
BstF5I GGATG 3 cut(s) 142, 376, 1744
BstH2I RGCGCY 2 cut(s) 1024, 2347
BstHHI GCGC 3 cut(s) 1023, 2346, 2520
BstMAI GTCTC 5 cut(s) 684, 1305, 1551, 1997, 2193
BstMCI CGRYCG 1 cut(s) 785
BstMWI GCNNNNNNNGC 3 cut(s) 67, 2350, 2359
BstNI CCWGG 6 cut(s) 850, 942, 1572, 1998, 2025, 2103
BstNSI RCATGY 2 cut(s) 1972, 2447
BstPAI GACNNNNGTC 4 cut(s) 1132, 1252, 1297, 1759
BstPI GGTNACC 5 cut(s) 804, 954, 1107, 1182, 1254
BstSCI CCNGG 8 cut(s) 161, 162, 848, 940, 1570, 1996, 2023, 2101
BstSFI CTRYAG 1 cut(s) 1475
BstSLI GKGCMC 1 cut(s) 334
BstV1I GCAGC 1 cut(s) 714
BstV2I GAAGAC 1 cut(s) 2289
BstX2I RGATCY 4 cut(s) 623, 1385, 1775, 2105
BstXI CCANNNNNNTGG 2 cut(s) 1765, 2153
BstYI RGATCY 4 cut(s) 623, 1385, 1775, 2105
Bsu36I CCTNAGG 1 cut(s) 810
BsuRI GGCC 2 cut(s) 520, 1002
BtgI CCRYGG 1 cut(s) 149
BtrI CACGTC 2 cut(s) 1175, 1709
BtsCI GGATG 3 cut(s) 142, 376, 1744
BtsI GCAGTG 2 cut(s) 629, 1472
BtsIMutI CAGTG 7 cut(s) 334, 352, 629, 1248, 1472, 2185, 2422
BveI ACCTGC 3 cut(s) 942, 1095, 1146
Cac8I GCNNGC 1 cut(s) 63
CfoI GCGC 3 cut(s) 1023, 2346, 2520
Cfr13I GGNCC 4 cut(s) 518, 735, 1158, 1278
Cfr9I CCCGGG 1 cut(s) 162
CseI GACGC 6 cut(s) 134, 890, 1088, 1139, 2351, 2376
CsiI ACCWGGT 1 cut(s) 1570
Csp6I GTAC 2 cut(s) 24, 1843
CviAII CATG 5 cut(s) 118, 133, 150, 1969, 2444
CviQI GTAC 2 cut(s) 24, 1843
DdeI CTNAG 7 cut(s) 171, 326, 426, 711, 810, 1821, 2172
DinI GGCGCC 1 cut(s) 1022
DraIII CACNNNGTG 1 cut(s) 1574
DrdI GACNNNNNNGTC 1 cut(s) 1713
DseDI GACNNNNNNGTC 1 cut(s) 1713
Eam1104I CTCTTC 7 cut(s) 1293, 1376, 1728, 1833, 1931, 2368, 2478
EarI CTCTTC 7 cut(s) 1293, 1376, 1728, 1833, 1931, 2368, 2478
EciI GGCGGA 1 cut(s) 1034
Ecl136II GAGCTC 1 cut(s) 310
Eco130I CCWWGG 4 cut(s) 149, 542, 1764, 2076
Eco24I GRGCYC 1 cut(s) 312
Eco31I GGTCTC 1 cut(s) 1305
Eco47I GGWCC 3 cut(s) 735, 1158, 1278
Eco53kI GAGCTC 1 cut(s) 310
Eco57I CTGAAG 1 cut(s) 2232
Eco81I CCTNAGG 1 cut(s) 810
Eco88I CYCGRG 2 cut(s) 162, 179
Eco91I GGTNACC 5 cut(s) 804, 954, 1107, 1182, 1254
EcoICRI GAGCTC 1 cut(s) 310
EcoNI CCTNNNNNAGG 3 cut(s) 996, 1569, 2028
EcoO109I RGGNCCY 2 cut(s) 1158, 1278
EcoO65I GGTNACC 5 cut(s) 804, 954, 1107, 1182, 1254
EcoRII CCWGG 6 cut(s) 848, 940, 1570, 1996, 2023, 2101
EcoT14I CCWWGG 4 cut(s) 149, 542, 1764, 2076
EcoT22I ATGCAT 1 cut(s) 1237
EcoT38I GRGCYC 1 cut(s) 312
EgeI GGCGCC 1 cut(s) 1022
EheI GGCGCC 1 cut(s) 1022
ErhI CCWWGG 4 cut(s) 149, 542, 1764, 2076
Esp3I CGTCTC 1 cut(s) 684
FaeI CATG 5 cut(s) 121, 136, 153, 1972, 2447
FaqI GGGAC 9 cut(s) 338, 523, 592, 655, 744, 1144, 1264, 1420, 1701
FatI CATG 5 cut(s) 117, 132, 149, 1968, 2443
FauI CCCGC 3 cut(s) 2, 508, 1177
FbaI TGATCA 3 cut(s) 34, 1747, 2134
FblI GTMKAC 1 cut(s) 2365
Fnu4HI GCNGC 5 cut(s) 703, 976, 1048, 1051, 1124
FokI GGATG 3 cut(s) 149, 383, 1751
FriOI GRGCYC 1 cut(s) 312
Fsp4HI GCNGC 5 cut(s) 703, 976, 1048, 1051, 1124
FspBI CTAG 3 cut(s) 458, 621, 795
FspI TGCGCA 1 cut(s) 2519
GlaI GCGC 3 cut(s) 1022, 2345, 2519
GluI GCNGC 5 cut(s) 703, 976, 1048, 1051, 1124
GsaI CCCAGC 1 cut(s) 1442
GsuI CTGGAG 2 cut(s) 1224, 2398
HaeII RGCGCY 2 cut(s) 1024, 2347
HaeIII GGCC 2 cut(s) 520, 1002
HapII CCGG 5 cut(s) 95, 163, 1096, 2347, 2451
HgaI GACGC 6 cut(s) 134, 890, 1088, 1139, 2351, 2376
HhaI GCGC 3 cut(s) 1023, 2346, 2520
Hin1I GRCGYC 4 cut(s) 946, 1021, 1099, 1150
Hin1II CATG 5 cut(s) 121, 136, 153, 1972, 2447
Hin6I GCGC 3 cut(s) 1021, 2344, 2518
HinP1I GCGC 3 cut(s) 1021, 2344, 2518
HincII GTYRAC 1 cut(s) 2366
HindII GTYRAC 1 cut(s) 2366
HpaII CCGG 5 cut(s) 95, 163, 1096, 2347, 2451
Hpy166II GTNNAC 7 cut(s) 115, 130, 332, 1878, 2099, 2366, 2441
Hpy188III TCNNGA 9 cut(s) 38, 313, 563, 621, 861, 1363, 1779, 1850, 2531
Hpy8I GTNNAC 7 cut(s) 115, 130, 332, 1878, 2099, 2366, 2441
HpyCH4III ACNGT 9 cut(s) 292, 363, 533, 560, 735, 1131, 1715, 2180, 2264
HpyCH4IV ACGT 7 cut(s) 26, 934, 946, 1174, 1294, 1708, 2383
HpyCH4V TGCA 7 cut(s) 332, 416, 1235, 1396, 1477, 1577, 2276
HpyF10VI GCNNNNNNNGC 3 cut(s) 67, 2350, 2359
HpyF3I CTNAG 7 cut(s) 171, 326, 426, 711, 810, 1821, 2172
HpySE526I ACGT 7 cut(s) 26, 934, 946, 1174, 1294, 1708, 2383
Hsp92I GRCGYC 4 cut(s) 946, 1021, 1099, 1150
Hsp92II CATG 5 cut(s) 121, 136, 153, 1972, 2447
HspAI GCGC 3 cut(s) 1021, 2344, 2518
KasI GGCGCC 1 cut(s) 1020
Ksp22I TGATCA 3 cut(s) 34, 1747, 2134
LmnI GCTCC 2 cut(s) 1645, 2359
Lsp1109I GCAGC 1 cut(s) 714
LweI GCATC 6 cut(s) 361, 403, 1244, 1732, 2024, 2410
MabI ACCWGGT 1 cut(s) 1570
MaeI CTAG 3 cut(s) 458, 621, 795
MaeII ACGT 7 cut(s) 26, 934, 946, 1174, 1294, 1708, 2383
MbiI CCGCTC 1 cut(s) 2058
MfeI CAATTG 2 cut(s) 417, 1974
MflI RGATCY 4 cut(s) 623, 1385, 1775, 2105
MhlI GDGCHC 2 cut(s) 312, 334
Mly113I GGCGCC 1 cut(s) 1021
MlyI GAGTC 3 cut(s) 310, 653, 1982
MmeI TCCRAC 1 cut(s) 78
Mph1103I ATGCAT 1 cut(s) 1237
MroXI GAANNNNTTC 2 cut(s) 1324, 1948
MseI TTAA 1 cut(s) 294
MslI CAYNNNNRTG 2 cut(s) 2151, 2469
MspI CCGG 5 cut(s) 95, 163, 1096, 2347, 2451
MspR9I CCNGG 8 cut(s) 163, 164, 850, 942, 1572, 1998, 2025, 2103
MunI CAATTG 2 cut(s) 417, 1974
MvaI CCWGG 6 cut(s) 850, 942, 1572, 1998, 2025, 2103
MwoI GCNNNNNNNGC 3 cut(s) 67, 2350, 2359
NarI GGCGCC 1 cut(s) 1021
NciI CCSGG 2 cut(s) 163, 164
NcoI CCATGG 1 cut(s) 149
NlaIII CATG 5 cut(s) 121, 136, 153, 1972, 2447
NlaIV GGNNCC 5 cut(s) 519, 1022, 1160, 1280, 1462
NmeAIII GCCGAG 1 cut(s) 2416
NsbI TGCGCA 1 cut(s) 2519
NsiI ATGCAT 1 cut(s) 1237
NspI RCATGY 2 cut(s) 1972, 2447
PciI ACATGT 1 cut(s) 2443
PdmI GAANNNNTTC 2 cut(s) 1324, 1948
PflFI GACNNNGTC 1 cut(s) 1149
PflMI CCANNNNNTGG 1 cut(s) 506
PfoI TCCNGGA 2 cut(s) 848, 940
PkrI GCNGC 5 cut(s) 704, 977, 1049, 1052, 1125
PleI GAGTC 3 cut(s) 310, 653, 1982
PluTI GGCGCC 1 cut(s) 1024
PpsI GAGTC 3 cut(s) 310, 653, 1982
PpuMI RGGWCCY 2 cut(s) 1158, 1278
PscI ACATGT 1 cut(s) 2443
PshAI GACNNNNGTC 4 cut(s) 1132, 1252, 1297, 1759
Psp124BI GAGCTC 1 cut(s) 312
Psp5II RGGWCCY 2 cut(s) 1158, 1278
Psp6I CCWGG 6 cut(s) 848, 940, 1570, 1996, 2023, 2101
PspEI GGTNACC 5 cut(s) 804, 954, 1107, 1182, 1254
PspFI CCCAGC 1 cut(s) 1438
PspGI CCWGG 6 cut(s) 848, 940, 1570, 1996, 2023, 2101
PspN4I GGNNCC 5 cut(s) 519, 1022, 1160, 1280, 1462
PspPI GGNCC 4 cut(s) 518, 735, 1158, 1278
PspPPI RGGWCCY 2 cut(s) 1158, 1278
PsrI GAACNNNNNNTAC 2 cut(s) 919, 951
PstI CTGCAG 1 cut(s) 1479
PsuI RGATCY 4 cut(s) 623, 1385, 1775, 2105
PsyI GACNNNGTC 1 cut(s) 1149
RsaI GTAC 2 cut(s) 25, 1844
RsaNI GTAC 2 cut(s) 24, 1843
RseI CAYNNNNRTG 2 cut(s) 2151, 2469
SacI GAGCTC 1 cut(s) 312
SalI GTCGAC 1 cut(s) 2364
SaqAI TTAA 1 cut(s) 294
SatI GCNGC 5 cut(s) 703, 976, 1048, 1051, 1124
Sau96I GGNCC 4 cut(s) 518, 735, 1158, 1278
ScaI AGTACT 1 cut(s) 1844
SchI GAGTC 3 cut(s) 310, 653, 1982
ScrFI CCNGG 8 cut(s) 163, 164, 850, 942, 1572, 1998, 2025, 2103
SduI GDGCHC 2 cut(s) 312, 334
SexAI ACCWGGT 1 cut(s) 1570
SfaNI GCATC 6 cut(s) 361, 403, 1244, 1732, 2024, 2410
SfcI CTRYAG 1 cut(s) 1475
SfoI GGCGCC 1 cut(s) 1022
SgrDI CGTCGACG 1 cut(s) 2364
SinI GGWCC 3 cut(s) 735, 1158, 1278
SmaI CCCGGG 1 cut(s) 164
SmiMI CAYNNNNRTG 2 cut(s) 2151, 2469
SmlI CTYRAG 2 cut(s) 1669, 2504
SmoI CTYRAG 2 cut(s) 1669, 2504
SspDI GGCGCC 1 cut(s) 1020
SspMI CTAG 3 cut(s) 458, 621, 795
SstI GAGCTC 1 cut(s) 312
StyD4I CCNGG 8 cut(s) 161, 162, 848, 940, 1570, 1996, 2023, 2101
StyI CCWWGG 4 cut(s) 149, 542, 1764, 2076
TaaI ACNGT 9 cut(s) 292, 363, 533, 560, 735, 1131, 1715, 2180, 2264
TaiI ACGT 7 cut(s) 29, 937, 949, 1177, 1297, 1711, 2386
TaqII GACCGA 1 cut(s) 799
TatI WGTACW 1 cut(s) 1842
TauI GCSGC 4 cut(s) 978, 1050, 1053, 1126
Tru1I TTAA 1 cut(s) 294
Tru9I TTAA 1 cut(s) 294
TscAI CASTG 7 cut(s) 334, 352, 636, 1248, 1479, 2185, 2422
TseI GCWGC 1 cut(s) 702
TspGWI ACGGA 3 cut(s) 708, 1237, 1264
TspMI CCCGGG 1 cut(s) 162
TspRI CASTG 7 cut(s) 334, 352, 636, 1248, 1479, 2185, 2422
Tth111I GACNNNGTC 1 cut(s) 1149
Van91I CCANNNNNTGG 1 cut(s) 506
VneI GTGCAC 1 cut(s) 330
VpaK11BI GGWCC 3 cut(s) 735, 1158, 1278
XagI CCTNNNNNAGG 3 cut(s) 996, 1569, 2028
XapI RAATTY 4 cut(s) 86, 258, 868, 1555
XbaI TCTAGA 1 cut(s) 620
XceI RCATGY 2 cut(s) 1972, 2447
XmaI CCCGGG 1 cut(s) 162
XmiI GTMKAC 1 cut(s) 2365
XmnI GAANNNNTTC 2 cut(s) 1324, 1948
XspI CTAG 3 cut(s) 458, 621, 795
ZraI GACGTC 1 cut(s) 947
ZrmI AGTACT 1 cut(s) 1844
Zsp2I ATGCAT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.