Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000249.1

Orthogroup ID

OG0007711

Physical Location & Seq

Genomic Coordinates Forward (+)

33503 .. 39997

Gene Structure 6495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000249.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2694 bp

atggcaaaaatccccagcggggcggagctccattggatacccgcccctaatggggggagaattcggggacaaatggggaatggggatggggatccccaatccccgctatctaagattggggatgaggtggtgatgggtacttcggctgatcaggacacgaggttttccaataagcaagccaagctgctgaaatcgcagaaatttgcacctgaattggaacatttggtggacatgaggaaggtgaatatggatgtgctccgtccatggattgctaatagggtaaccgagcttcttgggttcgaagatgaagttcttatcaacttcatttatggtcttttggatgtgaaggaagtgaatggaaaggagattcaaatttcactgactggatttatggagaaaaatacggtgaagtttatgagagagctttggacgcttcttctcagtgcgcaaaacaatgccagtggtgtccctcaacagttcttggatgccaaacaagaggaagcacgaaaaaagaaggaggaggcagatgcaattgaaactcagaggaagaaagataaggagacgcttgaactagagagatcgaagacgatggaaggaggggttgataagaaatcaagcaatgctgctttggagccaaactcaaatcgtgtgtcaccaagggcttcaagtgatcgtcctgatgatgaaagagggaatggcaagaggaatggtgtgaagccaagtaacaaggtttctagatctccagattcagcagattcagattcatctttgtcccctcggtttggtgaacgagacaggtcaagaagtgtatccgtttcaccaaaagcacgaggacggtccatttcttctgaaaggggaaggggttatcgctctccacaaagacgaccgattacgcctaggaggcgttcacctgagggatcactctccccaaaaggaagatcaccttattccaggcgaggatcaagatcaaaatcaccacgcagatcgcgctctcctatagtgcgtcgagctcgttctccgtatcatcgtaggtcacgatctcctggacgccgcaggtcacctcctcctttccgaagccgcaggtcaccctcaccttttcgaggccgtagatcaccctcaccttttcgaggccgtagatcaccctatcggcgccgaagatcaccctcacctccccgccgccgcagattaccctcacctattcgtaatcgcagatcaccatcacctatccggcgtcgcagatcaccctcccctctgcggcgacggacatcacctcttgtacggcgtcgcaggtccccctcacccgcacgtcgcagatcaccctctcctgttcgatcatcatatcgaagatctccacgtaacaggtatgcatctccagtgcaacggaggtcaccggttcgtggtggcagaaggtccccacctcttcgacgtaggtctccttcgccttctgatcgaagttcttcatctcctattcggcgtgattccccttcaccaatcaggagaacaacaaagcagcagagatctcccctgcaatcccaccaagaaagaacaaggtccattgagaacctgtctccagcgccacaacaatcttctggttctgaggggtcactgcagagggaatcgaagaatggaaatgattaccgcaaaagagttgcagctttgtcaccatcaccagagaagtctcctccaatgtcagaatctccaccaggtgcaaggagtgtgagggaaaagaggagattgtccagtccatatgaaagtcctgtgaaacgaccaagggagcaaattgctcgttatggtagctcaagtccttcaaggaaaccaagagaacaaaaacttcgtcgtgacagtcccaaagaaagtgaagaagaggaggatgcgggtaacagacccaagtccttagagagaagatcaagagacacatcacggatcagtaagcagataatttctcctgctaagattcctaataaggaagagtactctcctgaaagagtagcatctggtcaaaggtttactgaatctaaaagctatttggataatactgaaagaagaaacaaagagcaggaaatgaagagtggaaaatcctctggcagggggtcaaatgtaccaattgtctataaagactatctgccaggtgagacacaacgggcatcaaatcctggtgaaggtaaaaaagctgatgataagaaccgctctcaattaaagaataccaaggacagcgaacatcgtaaacctggatctttacgctcatctgttgaaatgattgatcatagtaatcagagtggcggtttggattctggttctgaggacagtgacaaaggcagaagcgaagacaaggaaaagagaaagaataagagatcagagaggcaagaagtgacttcagatgatgattacagttatgattctgcaattgaggacagaaaggaggctaaaaggaggaggaaagaggaaaagaggttgcggaaggagaagaagcgccgaagacgtgaggagcgacgacgcagaagggaagaacgtcgtgcagagaagcagaaagtgaagaactccagtgatgcttctggttcagatggtgaacatgtcaccggaagggggtttcattcaagtgacaatgaagaagaggctgttaagaagaaacttgagattgaattgcgcaagaaggctctcgaatcactcaaagcaaaaaagggcatcagtcaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 map03013 map03015

Pfam Domains

Protein Families

PWI

Protein Analysis

897

Amino Acids

102.51

Weight (kDa)

11.23

Isoelectric Point (pI)

120.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29210 AT2G29210
fragaria_vesca	FvH4_3g36942 FvH4_3g36942 FvH4_3g36942 FvH4_3g36942
malus_domestica	MD03G1086100.v1.1 MD11G1094700.v1.1
prunus_persica	Prupe.6G070300_v2.0.a1
pyrus_communis	pycom11g08040
rosa_chinensis	RchiOBHm_Chr5g0066361
rosa_laevigata	RLG00000035854
rosa_multiflora	Rmu_ssc0000249.1_g000008
rosa_roxburghii	Rroxscaffold_1G00014780
rosa_rugosa	Rorug05G0377600 Rorug05G0377700 Rorug05G0377700 Rorug05G0377800
rosa_samantha	Rh5AG436100 Rh5BG452500 Rh5CG474900 Rh5DG467500 Rh5DG467600
rosa_wichuraiana	Rw5G040850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	447, 2645
Acc36I	ACCTGC	3 cut(s)	1044, 1071, 1278
AccB1I	GGYRCC	1 cut(s)	1149
AccBSI	CCGCTC	1 cut(s)	2187
AccII	CGCG	1 cut(s)	988
AclWI	GGATC	6 cut(s)	86, 99, 925, 967, 1931, 2239
AcsI	RAATTY	3 cut(s)	60, 200, 372
AcuI	CTGAAG	1 cut(s)	2358
AcyI	GRCGYC	4 cut(s)	1048, 1150, 1231, 1282
AdeI	CACNNNGTG	1 cut(s)	1706
AfaI	GTAC	4 cut(s)	139, 1278, 1973, 2100
AflIII	ACRYGT	1 cut(s)	2569
AgeI	ACCGGT	1 cut(s)	1390
AgsI	TTSAA	8 cut(s)	371, 536, 569, 666, 1809, 2252, 2595, 2639
AjiI	CACGTC	2 cut(s)	1307, 2480
AjnI	CCWGG	6 cut(s)	950, 1042, 1702, 2125, 2152, 2227
AluBI	AGCT	9 cut(s)	28, 184, 289, 424, 1010, 1655, 1797, 2022, 2171
AluI	AGCT	9 cut(s)	28, 184, 289, 424, 1010, 1655, 1797, 2022, 2171
Alw21I	GWGCWC	3 cut(s)	30, 258, 1012
Alw26I	GTCTC	7 cut(s)	554, 786, 1437, 1572, 1683, 1905, 2126
AlwI	GGATC	6 cut(s)	86, 99, 925, 967, 1931, 2239
AoxI	GGCC	2 cut(s)	1102, 1129
ApeKI	GCWGC	4 cut(s)	184, 623, 1510, 1652
ApoI	RAATTY	3 cut(s)	60, 200, 372
ArsI	GACNNNNNNTTYG	4 cut(s)	635, 667, 1819, 1851
AsiGI	ACCGGT	1 cut(s)	1390
Asp700I	GAANNNNTTC	1 cut(s)	1456
AspA2I	CCTAGG	1 cut(s)	896
AspLEI	GCGC	6 cut(s)	448, 990, 1152, 1576, 2472, 2646
AspS9I	GGNCC	4 cut(s)	837, 1290, 1410, 1551
AsuII	TTCGAA	1 cut(s)	300
AvaII	GGWCC	4 cut(s)	837, 1290, 1410, 1551
AvrII	CCTAGG	1 cut(s)	896
AxyI	CCTNAGG	1 cut(s)	912
BamHI	GGATCC	1 cut(s)	91
BanI	GGYRCC	1 cut(s)	1149
BanII	GRGCYC	2 cut(s)	30, 1012
BarI	GAAGNNNNNNTAC	4 cut(s)	273, 305, 1420, 1452
BauI	CACGAG	2 cut(s)	157, 828
BbsI	GAAGAC	3 cut(s)	590, 2331, 2482
Bbv12I	GWGCWC	3 cut(s)	30, 258, 1012
BbvI	GCAGC	4 cut(s)	171, 610, 1522, 1664
BccI	CCATC	6 cut(s)	80, 127, 583, 1225, 1672, 2555
BceAI	ACGGC	3 cut(s)	1089, 1116, 1295
BcgI	CGANNNNNNTGC	2 cut(s)	1766, 1800
BciT130I	CCWGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
BciVI	GTATCC	2 cut(s)	30, 820
BclI	TGATCA	2 cut(s)	148, 2260
BcoDI	GTCTC	7 cut(s)	554, 786, 1437, 1572, 1683, 1905, 2126
BfaI	CTAG	3 cut(s)	572, 735, 897
BfmI	CTRYAG	2 cut(s)	996, 1607
BfoI	RGCGCY	3 cut(s)	1153, 1577, 2473
BfuAI	ACCTGC	3 cut(s)	1044, 1071, 1278
BfuI	GTATCC	2 cut(s)	30, 820
BglI	GCCNNNNNGGC	1 cut(s)	901
BglII	AGATCT	3 cut(s)	737, 1346, 1517
BisI	GCNGC	9 cut(s)	185, 624, 1051, 1078, 1177, 1180, 1256, 1511, 1653
BlnI	CCTAGG	1 cut(s)	896
BlsI	GCNGC	9 cut(s)	186, 625, 1052, 1079, 1178, 1181, 1257, 1512, 1654
BmcAI	AGTACT	1 cut(s)	1973
Bme1390I	CCNGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
Bme18I	GGWCC	4 cut(s)	837, 1290, 1410, 1551
BmgBI	CACGTC	2 cut(s)	1307, 2480
BmgT120I	GGNCC	4 cut(s)	837, 1290, 1410, 1551
BmiI	GGNNCC	5 cut(s)	93, 633, 1151, 1292, 1412
BmrFI	CCNGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
BmsI	GCATC	7 cut(s)	475, 517, 1376, 1861, 2000, 2153, 2536
BoxI	GACNNNNGTC	2 cut(s)	1429, 1888
BpiI	GAAGAC	3 cut(s)	590, 2331, 2482
BplI	GAGNNNNNCTC	2 cut(s)	623, 655
BpmI	CTGGAG	4 cut(s)	726, 1356, 1554, 2524
Bpu14I	TTCGAA	1 cut(s)	300
BpuEI	CTTGAG	2 cut(s)	1783, 2651
BsaAI	YACGTR	1 cut(s)	1355
BsaBI	GATNNNNATC	4 cut(s)	90, 964, 970, 1216
BsaHI	GRCGYC	4 cut(s)	1048, 1150, 1231, 1282
BsaI	GGTCTC	1 cut(s)	1437
BsaJI	CCNNGG	6 cut(s)	263, 656, 776, 896, 1769, 2205
BsaWI	WCCGGW	2 cut(s)	1390, 2576
Bse118I	RCCGGY	1 cut(s)	1390
Bse1I	ACTGG	5 cut(s)	388, 459, 1373, 1740, 2541
Bse21I	CCTNAGG	1 cut(s)	912
Bse3DI	GCAATG	1 cut(s)	625
Bse8I	GATNNNNATC	4 cut(s)	90, 964, 970, 1216
BseBI	CCWGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
BseDI	CCNNGG	6 cut(s)	263, 656, 776, 896, 1769, 2205
BseGI	GGATG	6 cut(s)	91, 127, 256, 346, 490, 1876
BseJI	GATNNNNATC	4 cut(s)	90, 964, 970, 1216
BseMI	GCAATG	1 cut(s)	625
BseMII	CTCAG	5 cut(s)	454, 554, 903, 1587, 2289
BseNI	ACTGG	5 cut(s)	388, 459, 1373, 1740, 2541
BseRI	GAGGAG	7 cut(s)	533, 1053, 1671, 1744, 1880, 2446, 2498
BseXI	GCAGC	4 cut(s)	171, 610, 1522, 1664
BseYI	CCCAGC	1 cut(s)	14
BsgI	GTGCAG	1 cut(s)	2535
Bsh1236I	CGCG	1 cut(s)	988
Bsh1285I	CGRYCG	1 cut(s)	887
BshFI	GGCC	2 cut(s)	1104, 1131
BshNI	GGYRCC	1 cut(s)	1149
BshTI	ACCGGT	1 cut(s)	1390
BsiEI	CGRYCG	1 cut(s)	887
BsiHKAI	GWGCWC	3 cut(s)	30, 258, 1012
BsiSI	CCGG	3 cut(s)	1228, 1391, 2577
BslFI	GGGAC	6 cut(s)	81, 452, 757, 1276, 1396, 1830
BsmAI	GTCTC	7 cut(s)	554, 786, 1437, 1572, 1683, 1905, 2126
BsmBI	CGTCTC	1 cut(s)	554
BsmFI	GGGAC	6 cut(s)	81, 452, 757, 1276, 1396, 1830
BsnI	GGCC	2 cut(s)	1104, 1131
Bso31I	GGTCTC	1 cut(s)	1437
Bsp119I	TTCGAA	1 cut(s)	300
Bsp1286I	GDGCHC	3 cut(s)	30, 258, 1012
Bsp19I	CCATGG	1 cut(s)	263
BspANI	GGCC	2 cut(s)	1104, 1131
BspCNI	CTCAG	5 cut(s)	453, 553, 904, 1588, 2290
BspFNI	CGCG	1 cut(s)	988
BspLI	GGNNCC	5 cut(s)	93, 633, 1151, 1292, 1412
BspMAI	CTGCAG	1 cut(s)	1611
BspMI	ACCTGC	3 cut(s)	1044, 1071, 1278
BspPI	GGATC	6 cut(s)	86, 99, 925, 967, 1931, 2239
BspT104I	TTCGAA	1 cut(s)	300
BspT107I	GGYRCC	1 cut(s)	1149
BspTNI	GGTCTC	1 cut(s)	1437
BsrBI	CCGCTC	1 cut(s)	2187
BsrDI	GCAATG	1 cut(s)	625
BsrFI	RCCGGY	1 cut(s)	1390
BsrI	ACTGG	5 cut(s)	388, 459, 1373, 1740, 2541
BssAI	RCCGGY	1 cut(s)	1390
BssECI	CCNNGG	6 cut(s)	263, 656, 776, 896, 1769, 2205
BssNI	GRCGYC	4 cut(s)	1048, 1150, 1231, 1282
BssSI	CACGAG	2 cut(s)	157, 828
BssT1I	CCWWGG	5 cut(s)	263, 656, 896, 1769, 2205
Bst2BI	CACGAG	2 cut(s)	157, 828
Bst2UI	CCWGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
Bst4CI	ACNGT	6 cut(s)	406, 477, 837, 1844, 2306, 2390
Bst6I	CTCTTC	5 cut(s)	1425, 1857, 1962, 2060, 2604
BstACI	GRCGYC	4 cut(s)	1048, 1150, 1231, 1282
BstBAI	YACGTR	1 cut(s)	1355
BstBI	TTCGAA	1 cut(s)	300
BstC8I	GCNNGC	1 cut(s)	177
BstDEI	CTNAG	8 cut(s)	111, 440, 540, 912, 1596, 1894, 1950, 2298
BstDSI	CCRYGG	1 cut(s)	263
BstEII	GGTNACC	4 cut(s)	280, 1056, 1083, 1386
BstENI	CCTNNNNNAGG	4 cut(s)	1098, 1125, 2083, 2157
BstF5I	GGATG	6 cut(s)	91, 127, 256, 346, 490, 1876
BstFNI	CGCG	1 cut(s)	988
BstH2I	RGCGCY	3 cut(s)	1153, 1577, 2473
BstHHI	GCGC	6 cut(s)	448, 990, 1152, 1576, 2472, 2646
BstMAI	GTCTC	7 cut(s)	554, 786, 1437, 1572, 1683, 1905, 2126
BstMCI	CGRYCG	1 cut(s)	887
BstMWI	GCNNNNNNNGC	5 cut(s)	181, 193, 430, 901, 987
BstNI	CCWGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
BstNSI	RCATGY	1 cut(s)	2573
BstPAI	GACNNNNGTC	2 cut(s)	1429, 1888
BstPI	GGTNACC	4 cut(s)	280, 1056, 1083, 1386
BstSCI	CCNGG	6 cut(s)	950, 1042, 1702, 2125, 2152, 2227
BstSFI	CTRYAG	2 cut(s)	996, 1607
BstUI	CGCG	1 cut(s)	988
BstV1I	GCAGC	4 cut(s)	171, 610, 1522, 1664
BstV2I	GAAGAC	3 cut(s)	590, 2331, 2482
BstX2I	RGATCY	5 cut(s)	91, 737, 1346, 1517, 2231
BstYI	RGATCY	5 cut(s)	91, 737, 1346, 1517, 2231
Bsu36I	CCTNAGG	1 cut(s)	912
BsuI	GTATCC	2 cut(s)	30, 820
BsuRI	GGCC	2 cut(s)	1104, 1131
BtgI	CCRYGG	1 cut(s)	263
BtrI	CACGTC	2 cut(s)	1307, 2480
BtsCI	GGATG	6 cut(s)	91, 127, 256, 346, 490, 1876
BtsI	GCAGTG	1 cut(s)	1604
BtsIMutI	CAGTG	7 cut(s)	377, 448, 466, 1380, 1604, 2311, 2548
BveI	ACCTGC	3 cut(s)	1044, 1071, 1278
Cac8I	GCNNGC	1 cut(s)	177
CfoI	GCGC	6 cut(s)	448, 990, 1152, 1576, 2472, 2646
Cfr10I	RCCGGY	1 cut(s)	1390
Cfr13I	GGNCC	4 cut(s)	837, 1290, 1410, 1551
CseI	GACGC	7 cut(s)	439, 571, 992, 1056, 1220, 1271, 2502
CsiI	ACCWGGT	1 cut(s)	1702
Csp6I	GTAC	4 cut(s)	138, 1277, 1972, 2099
CspAI	ACCGGT	1 cut(s)	1390
CspCI	CAANNNNNGTGG	2 cut(s)	442, 477
CviAII	CATG	3 cut(s)	232, 264, 2570
CviQI	GTAC	4 cut(s)	138, 1277, 1972, 2099
DdeI	CTNAG	8 cut(s)	111, 440, 540, 912, 1596, 1894, 1950, 2298
DinI	GGCGCC	1 cut(s)	1151
DraIII	CACNNNGTG	1 cut(s)	1706
Eam1104I	CTCTTC	5 cut(s)	1425, 1857, 1962, 2060, 2604
EarI	CTCTTC	5 cut(s)	1425, 1857, 1962, 2060, 2604
EciI	GGCGGA	1 cut(s)	38
Ecl136II	GAGCTC	2 cut(s)	28, 1010
Eco130I	CCWWGG	5 cut(s)	263, 656, 896, 1769, 2205
Eco24I	GRGCYC	2 cut(s)	30, 1012
Eco31I	GGTCTC	1 cut(s)	1437
Eco47I	GGWCC	4 cut(s)	837, 1290, 1410, 1551
Eco53kI	GAGCTC	2 cut(s)	28, 1010
Eco57I	CTGAAG	1 cut(s)	2358
Eco81I	CCTNAGG	1 cut(s)	912
Eco91I	GGTNACC	4 cut(s)	280, 1056, 1083, 1386
EcoICRI	GAGCTC	2 cut(s)	28, 1010
EcoNI	CCTNNNNNAGG	4 cut(s)	1098, 1125, 2083, 2157
EcoO109I	RGGNCCY	2 cut(s)	1290, 1410
EcoO65I	GGTNACC	4 cut(s)	280, 1056, 1083, 1386
EcoRI	GAATTC	1 cut(s)	60
EcoRII	CCWGG	6 cut(s)	950, 1042, 1702, 2125, 2152, 2227
EcoT14I	CCWWGG	5 cut(s)	263, 656, 896, 1769, 2205
EcoT22I	ATGCAT	1 cut(s)	1369
EcoT38I	GRGCYC	2 cut(s)	30, 1012
EgeI	GGCGCC	1 cut(s)	1151
EheI	GGCGCC	1 cut(s)	1151
ErhI	CCWWGG	5 cut(s)	263, 656, 896, 1769, 2205
Esp3I	CGTCTC	1 cut(s)	554
FaeI	CATG	3 cut(s)	235, 267, 2573
FalI	AAGNNNNNCTT	2 cut(s)	928, 960
FaqI	GGGAC	6 cut(s)	81, 452, 757, 1276, 1396, 1830
FatI	CATG	3 cut(s)	231, 263, 2569
FauI	CCCGC	6 cut(s)	11, 49, 111, 1181, 1309, 1867
FauNDI	CATATG	1 cut(s)	1747
FbaI	TGATCA	2 cut(s)	148, 2260
Fnu4HI	GCNGC	9 cut(s)	185, 624, 1051, 1078, 1177, 1180, 1256, 1511, 1653
FokI	GGATG	6 cut(s)	98, 134, 263, 353, 497, 1883
FriOI	GRGCYC	2 cut(s)	30, 1012
Fsp4HI	GCNGC	9 cut(s)	185, 624, 1051, 1078, 1177, 1180, 1256, 1511, 1653
FspBI	CTAG	3 cut(s)	572, 735, 897
FspI	TGCGCA	2 cut(s)	447, 2645
GlaI	GCGC	6 cut(s)	447, 989, 1151, 1575, 2471, 2645
GluI	GCNGC	9 cut(s)	185, 624, 1051, 1078, 1177, 1180, 1256, 1511, 1653
GsaI	CCCAGC	1 cut(s)	18
GsuI	CTGGAG	4 cut(s)	726, 1356, 1554, 2524
HaeII	RGCGCY	3 cut(s)	1153, 1577, 2473
HaeIII	GGCC	2 cut(s)	1104, 1131
HapII	CCGG	3 cut(s)	1228, 1391, 2577
HgaI	GACGC	7 cut(s)	439, 571, 992, 1056, 1220, 1271, 2502
HhaI	GCGC	6 cut(s)	448, 990, 1152, 1576, 2472, 2646
Hin1I	GRCGYC	4 cut(s)	1048, 1150, 1231, 1282
Hin1II	CATG	3 cut(s)	235, 267, 2573
Hin6I	GCGC	6 cut(s)	446, 988, 1150, 1574, 2470, 2644
HinP1I	GCGC	6 cut(s)	446, 988, 1150, 1574, 2470, 2644
HpaII	CCGG	3 cut(s)	1228, 1391, 2577
Hpy166II	GTNNAC	6 cut(s)	229, 788, 908, 2007, 2225, 2567
Hpy8I	GTNNAC	6 cut(s)	229, 788, 908, 2007, 2225, 2567
HpyCH4III	ACNGT	6 cut(s)	406, 477, 837, 1844, 2306, 2390
HpyCH4IV	ACGT	5 cut(s)	1306, 1354, 1426, 2479, 2509
HpyF10VI	GCNNNNNNNGC	5 cut(s)	181, 193, 430, 901, 987
HpyF3I	CTNAG	8 cut(s)	111, 440, 540, 912, 1596, 1894, 1950, 2298
HpySE526I	ACGT	5 cut(s)	1306, 1354, 1426, 2479, 2509
Hsp92I	GRCGYC	4 cut(s)	1048, 1150, 1231, 1282
Hsp92II	CATG	3 cut(s)	235, 267, 2573
HspAI	GCGC	6 cut(s)	446, 988, 1150, 1574, 2470, 2644
KasI	GGCGCC	1 cut(s)	1149
Ksp22I	TGATCA	2 cut(s)	148, 2260
LmnI	GCTCC	6 cut(s)	25, 33, 261, 631, 1774, 2485
Lsp1109I	GCAGC	4 cut(s)	171, 610, 1522, 1664
LweI	GCATC	7 cut(s)	475, 517, 1376, 1861, 2000, 2153, 2536
MabI	ACCWGGT	1 cut(s)	1702
MaeI	CTAG	3 cut(s)	572, 735, 897
MaeII	ACGT	5 cut(s)	1306, 1354, 1426, 2479, 2509
MbiI	CCGCTC	1 cut(s)	2187
MfeI	CAATTG	3 cut(s)	531, 2103, 2403
MflI	RGATCY	5 cut(s)	91, 737, 1346, 1517, 2231
MhlI	GDGCHC	3 cut(s)	30, 258, 1012
Mly113I	GGCGCC	1 cut(s)	1150
Mph1103I	ATGCAT	1 cut(s)	1369
MroXI	GAANNNNTTC	1 cut(s)	1456
MseI	TTAA	2 cut(s)	2195, 2619
MslI	CAYNNNNRTG	1 cut(s)	2595
MspA1I	CMGCKG	1 cut(s)	18
MspI	CCGG	3 cut(s)	1228, 1391, 2577
MspR9I	CCNGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
MunI	CAATTG	3 cut(s)	531, 2103, 2403
MvaI	CCWGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
MvnI	CGCG	1 cut(s)	988
MwoI	GCNNNNNNNGC	5 cut(s)	181, 193, 430, 901, 987
NarI	GGCGCC	1 cut(s)	1150
NcoI	CCATGG	1 cut(s)	263
NdeI	CATATG	1 cut(s)	1747
NlaIII	CATG	3 cut(s)	235, 267, 2573
NlaIV	GGNNCC	5 cut(s)	93, 633, 1151, 1292, 1412
NsbI	TGCGCA	2 cut(s)	447, 2645
NsiI	ATGCAT	1 cut(s)	1369
NspI	RCATGY	1 cut(s)	2573
NspV	TTCGAA	1 cut(s)	300
PciI	ACATGT	1 cut(s)	2569
PcsI	WCGNNNNNNNCGW	2 cut(s)	1033, 2485
PdmI	GAANNNNTTC	1 cut(s)	1456
PfoI	TCCNGGA	1 cut(s)	1042
PinAI	ACCGGT	1 cut(s)	1390
PkrI	GCNGC	9 cut(s)	186, 625, 1052, 1079, 1178, 1181, 1257, 1512, 1654
PluTI	GGCGCC	1 cut(s)	1153
Ppu21I	YACGTR	1 cut(s)	1355
PpuMI	RGGWCCY	2 cut(s)	1290, 1410
PscI	ACATGT	1 cut(s)	2569
PshAI	GACNNNNGTC	2 cut(s)	1429, 1888
Psp124BI	GAGCTC	2 cut(s)	30, 1012
Psp5II	RGGWCCY	2 cut(s)	1290, 1410
Psp6I	CCWGG	6 cut(s)	950, 1042, 1702, 2125, 2152, 2227
PspEI	GGTNACC	4 cut(s)	280, 1056, 1083, 1386
PspFI	CCCAGC	1 cut(s)	14
PspGI	CCWGG	6 cut(s)	950, 1042, 1702, 2125, 2152, 2227
PspN4I	GGNNCC	5 cut(s)	93, 633, 1151, 1292, 1412
PspPI	GGNCC	4 cut(s)	837, 1290, 1410, 1551
PspPPI	RGGWCCY	2 cut(s)	1290, 1410
PstI	CTGCAG	1 cut(s)	1611
PsuI	RGATCY	5 cut(s)	91, 737, 1346, 1517, 2231
RsaI	GTAC	4 cut(s)	139, 1278, 1973, 2100
RsaNI	GTAC	4 cut(s)	138, 1277, 1972, 2099
RseI	CAYNNNNRTG	1 cut(s)	2595
SacI	GAGCTC	2 cut(s)	30, 1012
SaqAI	TTAA	2 cut(s)	2195, 2619
SatI	GCNGC	9 cut(s)	185, 624, 1051, 1078, 1177, 1180, 1256, 1511, 1653
Sau96I	GGNCC	4 cut(s)	837, 1290, 1410, 1551
ScaI	AGTACT	1 cut(s)	1973
ScrFI	CCNGG	6 cut(s)	952, 1044, 1704, 2127, 2154, 2229
SduI	GDGCHC	3 cut(s)	30, 258, 1012
SexAI	ACCWGGT	1 cut(s)	1702
SfaNI	GCATC	7 cut(s)	475, 517, 1376, 1861, 2000, 2153, 2536
SfcI	CTRYAG	2 cut(s)	996, 1607
SfoI	GGCGCC	1 cut(s)	1151
SfuI	TTCGAA	1 cut(s)	300
SinI	GGWCC	4 cut(s)	837, 1290, 1410, 1551
SmiMI	CAYNNNNRTG	1 cut(s)	2595
SmlI	CTYRAG	2 cut(s)	1798, 2630
SmoI	CTYRAG	2 cut(s)	1798, 2630
SspDI	GGCGCC	1 cut(s)	1149
SspMI	CTAG	3 cut(s)	572, 735, 897
SstI	GAGCTC	2 cut(s)	30, 1012
StyD4I	CCNGG	6 cut(s)	950, 1042, 1702, 2125, 2152, 2227
StyI	CCWWGG	5 cut(s)	263, 656, 896, 1769, 2205
TaaI	ACNGT	6 cut(s)	406, 477, 837, 1844, 2306, 2390
TaiI	ACGT	5 cut(s)	1309, 1357, 1429, 2482, 2512
TaqII	GACCGA	1 cut(s)	901
TatI	WGTACW	1 cut(s)	1971
TauI	GCSGC	5 cut(s)	1053, 1080, 1179, 1182, 1258
Tru1I	TTAA	2 cut(s)	2195, 2619
Tru9I	TTAA	2 cut(s)	2195, 2619
TscAI	CASTG	7 cut(s)	384, 448, 466, 1380, 1611, 2311, 2548
TseI	GCWGC	4 cut(s)	184, 623, 1510, 1652
TspDTI	ATGAA	9 cut(s)	313, 321, 699, 753, 1449, 1764, 2078, 2579, 2619
TspGWI	ACGGA	6 cut(s)	248, 802, 1008, 1276, 1396, 1936
TspRI	CASTG	7 cut(s)	384, 448, 466, 1380, 1611, 2311, 2548
VpaK11BI	GGWCC	4 cut(s)	837, 1290, 1410, 1551
XagI	CCTNNNNNAGG	4 cut(s)	1098, 1125, 2083, 2157
XapI	RAATTY	3 cut(s)	60, 200, 372
XbaI	TCTAGA	1 cut(s)	734
XceI	RCATGY	1 cut(s)	2573
XmaJI	CCTAGG	1 cut(s)	896
XmnI	GAANNNNTTC	1 cut(s)	1456
XspI	CTAG	3 cut(s)	572, 735, 897
ZrmI	AGTACT	1 cut(s)	1973
Zsp2I	ATGCAT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.