Rh5BG452500

Serine arginine repetitive matrix protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0007711
Physical Location & Seq
Forward (+)
72618601 .. 72624959
6359 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG452500.1

Sequence Viewer

Length: 2553 bp
ATGTCGGGCGGGTTTTTTAGGGGTACTTCGGCTGATCAGGACACGAGGTTTTCCAATAAGCAAGCCAAGCTGCTGAAATCGCAGAAATTTGCACCTGAATTGGAACATTTGGTGGACATGAGGAAGGTGAATATGGATGTGCTCCGTCCATGGATTGCTAATAGGGTAACCGAGCTTCTTGGGTTCGAAGATGAAGTTCTTATCAACTTCATTTATGGTCTTTTGGATGTGAAGGAAGTGAATGGAAAGGAGATTCAAATTTCACTGACTGGATTTATGGAGAAAAATACGGTGAAGTTTATGAGAGAGCTTTGGACGCTTCTTCTCAGTGCGCAAAACAATGCCAGTGGTGTCCCTCAACAGTTCTTGGATGCCAAACAAGAGGAAGCACGAAAAAAGAAGGAGGAGGCAGATGCAATTGAAACTCAGAGGAAGAAAGATAAGGAGACGCTTGAACTAGAGAGATCGAAGACGATGGAAGGAGGGGTTGATAAGAAATCAAGCAATGCTGCTTTGGAGCCAAACTCAAATCGTGTGTCACCAAGGGCTTCAAGTGATCGTCCTGATGATGAAAGAGGGAATGGCAAGAGGAATGGTGTGAAGCCAAGTAACAAGGTTTCTAGATCTCCAGATTCAGCAGATTCAGATTCATCTTTGTCCCCTCGGTTTGGTGAACGAGACAGGTCAAGAAGTGTATCCGTTTCACCAAAAGCACGAGGACGGTCCATTTCTTCTGAAAGGGGAAGGGGTTATCGCTCTCCACAAAGACGACCGATTACGCCTAGGAGGCGTTCACCTGAGGGATCACTCTCCCCAAAAGGAAGATCACCTTATTCCAGGCGAGGATCAAGATCAAAATCACCACGCAGATCGCGCTCTCCTATAGTGCGTCGAGCTCGTTCTCCGTATCATCGTAGGTCACGATCTCCTGGACGCCGCAGGTCACCTCCTCCTTTCCGAAGCCGCAGGTCACCCTCACCTTTTCGAGGCCGTAGATCACCCTATCGGCGCCGAAGATCACCCTCACCTCCCCGCCGCCGCAGATTACCCTCACCTATTCGTAATCGCAGATCACCATCACCTATCCGGCGTCGCAGATCACCCTCCCCTCTGCGGCGACGGACATCACCTCTTGTACGGCGTCGCAGGTCCCCCTCACCCGCACGTCGCAGATCACCCTCTCCTGTTCGATCATCATATCGAAGATCTCCACGTAACAGGTATGCATCTCCAGTGCAACGGAGGTCACCGGTTCGTGGTGGCAGAAGGTCCCCACCTCTTCGACGTAGGTCTCCTTCGCCTTCTGATCGAAGTTCTTCATCTCCTATTCGGCGTGATTCCCCTTCACCAATCAGGAGAACAACAAAGCAGCAGAGATCTCCCCTGCAATCCCACCAAGAAAGAACAAGGTCCATTGAGAACCTGTCTCCAGCGCCACAACAATCTTCTGGTTCTGAGGGGTCACTGCAGAGGGAATCGAAGAATGGAAATGATTACCGCAAAAGAGTTGCAGCTTTGTCACCATCACCAGAGAAGTCTCCTCCAATGTCAGAATCTCCACCAGGTGCAAGGAGTGTGAGGGAAAAGAGGAGATTGTCCAGTCCATATGAAAGTCCTGTGAAACGACCAAGGGAGCAAATTGCTCGTTATGGTAGCTCAAGTCCTTCAAGGAAACCAAGAGAACAAAAACTTCGTCGTGACAGTCCCAAAGAAAGTGAAGAAGAGGAGGATGCGGGTAACAGACCCAAGTCCTTAGAGAGAAGATCAAGAGACACATCACGGATCAGTAAGCAGATAATTTCTCCTGCTAAGATTCCTAATAAGGAAGAGTACTCTCCTGAAAGAGTAGCATCTGGTCAAAGGTTTACTGAATCTAAAAGCTATTTGGATAATACTGAAAGAAGAAACAAAGAGCAGGAAATGAAGAGTGGAAAATCCTCTGGCAGGGGGTCAAATGTACCAATTGTCTATAAAGACTATCTGCCAGGTGAGACACAACGGGCATCAAATCCTGGTGAAGGTAAAAAAGCTGAAGATAAGAACCGCTCTCAATTAAAGAATACCAAGGACAGCGAACATCGTAAACCTGGATCTTTACGCTCATCTGTTGAAATGATTGATCATAGTAATCAGAGTGGCGGTTTGGATTCTGGTTCTGAGGACAGTGACAAAGGCAGAAGCGAAGACAAGGAAAAGAGAAAGAATAAGAGATCAGAGAGGCAAGAAGTGACTTCAGATGATGATTACAGTTATGATTCTGCAATTGAGGACAGAAAGGAGGCTAAAAGGAGGAGGAAAGAGGAAAAGAGGTTGCGGAAGGAGAAGAAGCGCCGAAGACGTGAGGAGCGACGACGCAGAAGGGAAGAACGTCGTGCAGAGAAGCAGAAAGTGAAGAACTCCAGTGATGCTTCTGGTTCAGATGGTGAACATGTCACCGGAAGGGGGTTTCATTCAAGTGACAATGAAGAAGAGGCTGTTAAGAAGAAACTTGAGATTGAATTGCGCAAGAAGGCTCTCGAATCACTCAAAGCAAAAAAGGGCATCAGTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 map03013 map03015
Pfam Domains
Protein Families
PWI

Protein Analysis

850

Amino Acids

97.59

Weight (kDa)

11.26

Isoelectric Point (pI)

123.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWI PF01480 46 - 115 5.7e-27 PWI domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 333, 2504
Acc36I ACCTGC 3 cut(s) 930, 957, 1137
AccB1I GGYRCC 1 cut(s) 1008
AccBSI CCGCTC 1 cut(s) 2046
AccII CGCG 1 cut(s) 874
AclWI GGATC 4 cut(s) 811, 853, 1790, 2098
AcsI RAATTY 2 cut(s) 86, 258
AcuI CTGAAG 2 cut(s) 2052, 2217
AcyI GRCGYC 4 cut(s) 934, 1009, 1090, 1141
AdeI CACNNNGTG 1 cut(s) 1565
AfaI GTAC 4 cut(s) 25, 1137, 1832, 1959
AfiI CCNNNNNNNGG 7 cut(s) 668, 986, 1113, 1256, 1944, 2018, 2442
AflIII ACRYGT 1 cut(s) 2428
AgeI ACCGGT 1 cut(s) 1249
AgsI TTSAA 8 cut(s) 257, 422, 455, 552, 1668, 2111, 2454, 2498
AjiI CACGTC 2 cut(s) 1166, 2339
AjnI CCWGG 6 cut(s) 836, 928, 1561, 1984, 2011, 2086
AluBI AGCT 8 cut(s) 70, 175, 310, 896, 1514, 1656, 1881, 2030
AluI AGCT 8 cut(s) 70, 175, 310, 896, 1514, 1656, 1881, 2030
Alw21I GWGCWC 2 cut(s) 144, 898
Alw26I GTCTC 7 cut(s) 440, 672, 1296, 1431, 1542, 1764, 1985
AlwI GGATC 4 cut(s) 811, 853, 1790, 2098
AoxI GGCC 1 cut(s) 988
ApeKI GCWGC 4 cut(s) 70, 509, 1369, 1511
ApoI RAATTY 2 cut(s) 86, 258
ArsI GACNNNNNNTTYG 4 cut(s) 521, 553, 1678, 1710
AsiGI ACCGGT 1 cut(s) 1249
Asp700I GAANNNNTTC 1 cut(s) 1315
AspA2I CCTAGG 1 cut(s) 782
AspLEI GCGC 6 cut(s) 334, 876, 1011, 1435, 2331, 2505
AspS9I GGNCC 4 cut(s) 723, 1149, 1269, 1410
AsuII TTCGAA 1 cut(s) 186
AvaII GGWCC 4 cut(s) 723, 1149, 1269, 1410
AvrII CCTAGG 1 cut(s) 782
AxyI CCTNAGG 1 cut(s) 798
BanI GGYRCC 1 cut(s) 1008
BanII GRGCYC 1 cut(s) 898
BarI GAAGNNNNNNTAC 4 cut(s) 159, 191, 1279, 1311
BauI CACGAG 2 cut(s) 43, 714
BbsI GAAGAC 3 cut(s) 476, 2190, 2341
Bbv12I GWGCWC 2 cut(s) 144, 898
BbvI GCAGC 4 cut(s) 57, 496, 1381, 1523
BccI CCATC 4 cut(s) 469, 1084, 1531, 2414
BceAI ACGGC 2 cut(s) 975, 1154
BcgI CGANNNNNNTGC 2 cut(s) 1625, 1659
BciT130I CCWGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
BciVI GTATCC 1 cut(s) 706
BclI TGATCA 2 cut(s) 34, 2119
BcoDI GTCTC 7 cut(s) 440, 672, 1296, 1431, 1542, 1764, 1985
BfaI CTAG 3 cut(s) 458, 621, 783
BfmI CTRYAG 2 cut(s) 882, 1466
BfoI RGCGCY 3 cut(s) 1012, 1436, 2332
BfuAI ACCTGC 3 cut(s) 930, 957, 1137
BfuI GTATCC 1 cut(s) 706
BglI GCCNNNNNGGC 1 cut(s) 787
BglII AGATCT 3 cut(s) 623, 1205, 1376
BisI GCNGC 9 cut(s) 71, 510, 937, 964, 1036, 1039, 1115, 1370, 1512
BlnI CCTAGG 1 cut(s) 782
BlsI GCNGC 9 cut(s) 72, 511, 938, 965, 1037, 1040, 1116, 1371, 1513
BmcAI AGTACT 1 cut(s) 1832
Bme1390I CCNGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
Bme18I GGWCC 4 cut(s) 723, 1149, 1269, 1410
BmgBI CACGTC 2 cut(s) 1166, 2339
BmgT120I GGNCC 4 cut(s) 723, 1149, 1269, 1410
BmiI GGNNCC 4 cut(s) 519, 1010, 1151, 1271
BmrFI CCNGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
BmsI GCATC 7 cut(s) 361, 403, 1235, 1720, 1859, 2012, 2395
BoxI GACNNNNGTC 2 cut(s) 1288, 1747
BpiI GAAGAC 3 cut(s) 476, 2190, 2341
BplI GAGNNNNNCTC 2 cut(s) 509, 541
BpmI CTGGAG 4 cut(s) 612, 1215, 1413, 2383
Bpu14I TTCGAA 1 cut(s) 186
BpuEI CTTGAG 2 cut(s) 1642, 2510
BsaAI YACGTR 1 cut(s) 1214
BsaBI GATNNNNATC 3 cut(s) 850, 856, 1075
BsaHI GRCGYC 4 cut(s) 934, 1009, 1090, 1141
BsaI GGTCTC 1 cut(s) 1296
BsaJI CCNNGG 6 cut(s) 149, 542, 662, 782, 1628, 2064
BsaWI WCCGGW 2 cut(s) 1249, 2435
Bsc4I CCNNNNNNNGG 7 cut(s) 668, 986, 1113, 1256, 1944, 2018, 2442
Bse118I RCCGGY 1 cut(s) 1249
Bse1I ACTGG 5 cut(s) 274, 345, 1232, 1599, 2400
Bse21I CCTNAGG 1 cut(s) 798
Bse3DI GCAATG 1 cut(s) 511
Bse8I GATNNNNATC 3 cut(s) 850, 856, 1075
BseBI CCWGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
BseDI CCNNGG 6 cut(s) 149, 542, 662, 782, 1628, 2064
BseGI GGATG 4 cut(s) 142, 232, 376, 1735
BseJI GATNNNNATC 3 cut(s) 850, 856, 1075
BseLI CCNNNNNNNGG 7 cut(s) 668, 986, 1113, 1256, 1944, 2018, 2442
BseMI GCAATG 1 cut(s) 511
BseMII CTCAG 5 cut(s) 340, 440, 789, 1446, 2148
BseNI ACTGG 5 cut(s) 274, 345, 1232, 1599, 2400
BseRI GAGGAG 7 cut(s) 419, 939, 1530, 1603, 1739, 2305, 2357
BseXI GCAGC 4 cut(s) 57, 496, 1381, 1523
BsgI GTGCAG 1 cut(s) 2394
Bsh1236I CGCG 1 cut(s) 874
Bsh1285I CGRYCG 1 cut(s) 773
BshFI GGCC 1 cut(s) 990
BshNI GGYRCC 1 cut(s) 1008
BshTI ACCGGT 1 cut(s) 1249
BsiEI CGRYCG 1 cut(s) 773
BsiHKAI GWGCWC 2 cut(s) 144, 898
BsiSI CCGG 3 cut(s) 1087, 1250, 2436
BslFI GGGAC 5 cut(s) 338, 643, 1135, 1255, 1689
BslI CCNNNNNNNGG 7 cut(s) 668, 986, 1113, 1256, 1944, 2018, 2442
BsmAI GTCTC 7 cut(s) 440, 672, 1296, 1431, 1542, 1764, 1985
BsmBI CGTCTC 1 cut(s) 440
BsmFI GGGAC 5 cut(s) 338, 643, 1135, 1255, 1689
BsnI GGCC 1 cut(s) 990
Bso31I GGTCTC 1 cut(s) 1296
Bsp119I TTCGAA 1 cut(s) 186
Bsp1286I GDGCHC 2 cut(s) 144, 898
Bsp19I CCATGG 1 cut(s) 149
BspANI GGCC 1 cut(s) 990
BspCNI CTCAG 5 cut(s) 339, 439, 790, 1447, 2149
BspFNI CGCG 1 cut(s) 874
BspLI GGNNCC 4 cut(s) 519, 1010, 1151, 1271
BspMAI CTGCAG 1 cut(s) 1470
BspMI ACCTGC 3 cut(s) 930, 957, 1137
BspPI GGATC 4 cut(s) 811, 853, 1790, 2098
BspT104I TTCGAA 1 cut(s) 186
BspT107I GGYRCC 1 cut(s) 1008
BspTNI GGTCTC 1 cut(s) 1296
BsrBI CCGCTC 1 cut(s) 2046
BsrDI GCAATG 1 cut(s) 511
BsrFI RCCGGY 1 cut(s) 1249
BsrI ACTGG 5 cut(s) 274, 345, 1232, 1599, 2400
BssAI RCCGGY 1 cut(s) 1249
BssECI CCNNGG 6 cut(s) 149, 542, 662, 782, 1628, 2064
BssNI GRCGYC 4 cut(s) 934, 1009, 1090, 1141
BssSI CACGAG 2 cut(s) 43, 714
BssT1I CCWWGG 5 cut(s) 149, 542, 782, 1628, 2064
Bst2BI CACGAG 2 cut(s) 43, 714
Bst2UI CCWGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
Bst4CI ACNGT 6 cut(s) 292, 363, 723, 1703, 2165, 2249
Bst6I CTCTTC 5 cut(s) 1284, 1716, 1821, 1919, 2463
BstACI GRCGYC 4 cut(s) 934, 1009, 1090, 1141
BstBAI YACGTR 1 cut(s) 1214
BstBI TTCGAA 1 cut(s) 186
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 7 cut(s) 326, 426, 798, 1455, 1753, 1809, 2157
BstDSI CCRYGG 1 cut(s) 149
BstEII GGTNACC 4 cut(s) 166, 942, 969, 1245
BstENI CCTNNNNNAGG 3 cut(s) 984, 1942, 2016
BstF5I GGATG 4 cut(s) 142, 232, 376, 1735
BstFNI CGCG 1 cut(s) 874
BstH2I RGCGCY 3 cut(s) 1012, 1436, 2332
BstHHI GCGC 6 cut(s) 334, 876, 1011, 1435, 2331, 2505
BstMAI GTCTC 7 cut(s) 440, 672, 1296, 1431, 1542, 1764, 1985
BstMCI CGRYCG 1 cut(s) 773
BstMWI GCNNNNNNNGC 5 cut(s) 67, 79, 316, 787, 873
BstNI CCWGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
BstNSI RCATGY 1 cut(s) 2432
BstPAI GACNNNNGTC 2 cut(s) 1288, 1747
BstPI GGTNACC 4 cut(s) 166, 942, 969, 1245
BstSCI CCNGG 6 cut(s) 836, 928, 1561, 1984, 2011, 2086
BstSFI CTRYAG 2 cut(s) 882, 1466
BstUI CGCG 1 cut(s) 874
BstV1I GCAGC 4 cut(s) 57, 496, 1381, 1523
BstV2I GAAGAC 3 cut(s) 476, 2190, 2341
BstX2I RGATCY 4 cut(s) 623, 1205, 1376, 2090
BstYI RGATCY 4 cut(s) 623, 1205, 1376, 2090
Bsu36I CCTNAGG 1 cut(s) 798
BsuI GTATCC 1 cut(s) 706
BsuRI GGCC 1 cut(s) 990
BtgI CCRYGG 1 cut(s) 149
BtrI CACGTC 2 cut(s) 1166, 2339
BtsCI GGATG 4 cut(s) 142, 232, 376, 1735
BtsI GCAGTG 1 cut(s) 1463
BtsIMutI CAGTG 7 cut(s) 263, 334, 352, 1239, 1463, 2170, 2407
BveI ACCTGC 3 cut(s) 930, 957, 1137
Cac8I GCNNGC 1 cut(s) 63
CfoI GCGC 6 cut(s) 334, 876, 1011, 1435, 2331, 2505
Cfr10I RCCGGY 1 cut(s) 1249
Cfr13I GGNCC 4 cut(s) 723, 1149, 1269, 1410
CseI GACGC 7 cut(s) 325, 457, 878, 942, 1079, 1130, 2361
CsiI ACCWGGT 1 cut(s) 1561
Csp6I GTAC 4 cut(s) 24, 1136, 1831, 1958
CspAI ACCGGT 1 cut(s) 1249
CspCI CAANNNNNGTGG 2 cut(s) 328, 363
CviAII CATG 3 cut(s) 118, 150, 2429
CviQI GTAC 4 cut(s) 24, 1136, 1831, 1958
DdeI CTNAG 7 cut(s) 326, 426, 798, 1455, 1753, 1809, 2157
DinI GGCGCC 1 cut(s) 1010
DraIII CACNNNGTG 1 cut(s) 1565
Eam1104I CTCTTC 5 cut(s) 1284, 1716, 1821, 1919, 2463
EarI CTCTTC 5 cut(s) 1284, 1716, 1821, 1919, 2463
Ecl136II GAGCTC 1 cut(s) 896
Eco130I CCWWGG 5 cut(s) 149, 542, 782, 1628, 2064
Eco24I GRGCYC 1 cut(s) 898
Eco31I GGTCTC 1 cut(s) 1296
Eco47I GGWCC 4 cut(s) 723, 1149, 1269, 1410
Eco53kI GAGCTC 1 cut(s) 896
Eco57I CTGAAG 2 cut(s) 2052, 2217
Eco81I CCTNAGG 1 cut(s) 798
Eco91I GGTNACC 4 cut(s) 166, 942, 969, 1245
EcoICRI GAGCTC 1 cut(s) 896
EcoNI CCTNNNNNAGG 3 cut(s) 984, 1942, 2016
EcoO109I RGGNCCY 2 cut(s) 1149, 1269
EcoO65I GGTNACC 4 cut(s) 166, 942, 969, 1245
EcoRII CCWGG 6 cut(s) 836, 928, 1561, 1984, 2011, 2086
EcoT14I CCWWGG 5 cut(s) 149, 542, 782, 1628, 2064
EcoT22I ATGCAT 1 cut(s) 1228
EcoT38I GRGCYC 1 cut(s) 898
EgeI GGCGCC 1 cut(s) 1010
EheI GGCGCC 1 cut(s) 1010
ErhI CCWWGG 5 cut(s) 149, 542, 782, 1628, 2064
Esp3I CGTCTC 1 cut(s) 440
FaeI CATG 3 cut(s) 121, 153, 2432
FalI AAGNNNNNCTT 2 cut(s) 814, 846
FaqI GGGAC 5 cut(s) 338, 643, 1135, 1255, 1689
FatI CATG 3 cut(s) 117, 149, 2428
FauI CCCGC 4 cut(s) 2, 1040, 1168, 1726
FauNDI CATATG 1 cut(s) 1606
FbaI TGATCA 2 cut(s) 34, 2119
Fnu4HI GCNGC 9 cut(s) 71, 510, 937, 964, 1036, 1039, 1115, 1370, 1512
FokI GGATG 4 cut(s) 149, 239, 383, 1742
FriOI GRGCYC 1 cut(s) 898
Fsp4HI GCNGC 9 cut(s) 71, 510, 937, 964, 1036, 1039, 1115, 1370, 1512
FspBI CTAG 3 cut(s) 458, 621, 783
FspI TGCGCA 2 cut(s) 333, 2504
GlaI GCGC 6 cut(s) 333, 875, 1010, 1434, 2330, 2504
GluI GCNGC 9 cut(s) 71, 510, 937, 964, 1036, 1039, 1115, 1370, 1512
GsuI CTGGAG 4 cut(s) 612, 1215, 1413, 2383
HaeII RGCGCY 3 cut(s) 1012, 1436, 2332
HaeIII GGCC 1 cut(s) 990
HapII CCGG 3 cut(s) 1087, 1250, 2436
HgaI GACGC 7 cut(s) 325, 457, 878, 942, 1079, 1130, 2361
HhaI GCGC 6 cut(s) 334, 876, 1011, 1435, 2331, 2505
Hin1I GRCGYC 4 cut(s) 934, 1009, 1090, 1141
Hin1II CATG 3 cut(s) 121, 153, 2432
Hin6I GCGC 6 cut(s) 332, 874, 1009, 1433, 2329, 2503
HinP1I GCGC 6 cut(s) 332, 874, 1009, 1433, 2329, 2503
HpaII CCGG 3 cut(s) 1087, 1250, 2436
Hpy166II GTNNAC 6 cut(s) 115, 674, 794, 1866, 2084, 2426
Hpy8I GTNNAC 6 cut(s) 115, 674, 794, 1866, 2084, 2426
HpyCH4III ACNGT 6 cut(s) 292, 363, 723, 1703, 2165, 2249
HpyCH4IV ACGT 5 cut(s) 1165, 1213, 1285, 2338, 2368
HpyF10VI GCNNNNNNNGC 5 cut(s) 67, 79, 316, 787, 873
HpyF3I CTNAG 7 cut(s) 326, 426, 798, 1455, 1753, 1809, 2157
HpySE526I ACGT 5 cut(s) 1165, 1213, 1285, 2338, 2368
Hsp92I GRCGYC 4 cut(s) 934, 1009, 1090, 1141
Hsp92II CATG 3 cut(s) 121, 153, 2432
HspAI GCGC 6 cut(s) 332, 874, 1009, 1433, 2329, 2503
KasI GGCGCC 1 cut(s) 1008
Ksp22I TGATCA 2 cut(s) 34, 2119
LmnI GCTCC 4 cut(s) 147, 517, 1633, 2344
Lsp1109I GCAGC 4 cut(s) 57, 496, 1381, 1523
LweI GCATC 7 cut(s) 361, 403, 1235, 1720, 1859, 2012, 2395
MabI ACCWGGT 1 cut(s) 1561
MaeI CTAG 3 cut(s) 458, 621, 783
MaeII ACGT 5 cut(s) 1165, 1213, 1285, 2338, 2368
MbiI CCGCTC 1 cut(s) 2046
MfeI CAATTG 3 cut(s) 417, 1962, 2262
MflI RGATCY 4 cut(s) 623, 1205, 1376, 2090
MhlI GDGCHC 2 cut(s) 144, 898
Mly113I GGCGCC 1 cut(s) 1009
Mph1103I ATGCAT 1 cut(s) 1228
MroXI GAANNNNTTC 1 cut(s) 1315
MseI TTAA 2 cut(s) 2054, 2478
MslI CAYNNNNRTG 1 cut(s) 2454
MspI CCGG 3 cut(s) 1087, 1250, 2436
MspR9I CCNGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
MunI CAATTG 3 cut(s) 417, 1962, 2262
MvaI CCWGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
MvnI CGCG 1 cut(s) 874
MwoI GCNNNNNNNGC 5 cut(s) 67, 79, 316, 787, 873
NarI GGCGCC 1 cut(s) 1009
NcoI CCATGG 1 cut(s) 149
NdeI CATATG 1 cut(s) 1606
NlaIII CATG 3 cut(s) 121, 153, 2432
NlaIV GGNNCC 4 cut(s) 519, 1010, 1151, 1271
NsbI TGCGCA 2 cut(s) 333, 2504
NsiI ATGCAT 1 cut(s) 1228
NspI RCATGY 1 cut(s) 2432
NspV TTCGAA 1 cut(s) 186
PciI ACATGT 1 cut(s) 2428
PcsI WCGNNNNNNNCGW 2 cut(s) 919, 2344
PdmI GAANNNNTTC 1 cut(s) 1315
PfoI TCCNGGA 1 cut(s) 928
PinAI ACCGGT 1 cut(s) 1249
PkrI GCNGC 9 cut(s) 72, 511, 938, 965, 1037, 1040, 1116, 1371, 1513
PluTI GGCGCC 1 cut(s) 1012
Ppu21I YACGTR 1 cut(s) 1214
PpuMI RGGWCCY 2 cut(s) 1149, 1269
PscI ACATGT 1 cut(s) 2428
PshAI GACNNNNGTC 2 cut(s) 1288, 1747
Psp124BI GAGCTC 1 cut(s) 898
Psp5II RGGWCCY 2 cut(s) 1149, 1269
Psp6I CCWGG 6 cut(s) 836, 928, 1561, 1984, 2011, 2086
PspEI GGTNACC 4 cut(s) 166, 942, 969, 1245
PspGI CCWGG 6 cut(s) 836, 928, 1561, 1984, 2011, 2086
PspN4I GGNNCC 4 cut(s) 519, 1010, 1151, 1271
PspPI GGNCC 4 cut(s) 723, 1149, 1269, 1410
PspPPI RGGWCCY 2 cut(s) 1149, 1269
PstI CTGCAG 1 cut(s) 1470
PsuI RGATCY 4 cut(s) 623, 1205, 1376, 2090
RsaI GTAC 4 cut(s) 25, 1137, 1832, 1959
RsaNI GTAC 4 cut(s) 24, 1136, 1831, 1958
RseI CAYNNNNRTG 1 cut(s) 2454
SacI GAGCTC 1 cut(s) 898
SaqAI TTAA 2 cut(s) 2054, 2478
SatI GCNGC 9 cut(s) 71, 510, 937, 964, 1036, 1039, 1115, 1370, 1512
Sau96I GGNCC 4 cut(s) 723, 1149, 1269, 1410
ScaI AGTACT 1 cut(s) 1832
ScrFI CCNGG 6 cut(s) 838, 930, 1563, 1986, 2013, 2088
SduI GDGCHC 2 cut(s) 144, 898
SexAI ACCWGGT 1 cut(s) 1561
SfaNI GCATC 7 cut(s) 361, 403, 1235, 1720, 1859, 2012, 2395
SfcI CTRYAG 2 cut(s) 882, 1466
SfoI GGCGCC 1 cut(s) 1010
SfuI TTCGAA 1 cut(s) 186
SinI GGWCC 4 cut(s) 723, 1149, 1269, 1410
SmiMI CAYNNNNRTG 1 cut(s) 2454
SmlI CTYRAG 2 cut(s) 1657, 2489
SmoI CTYRAG 2 cut(s) 1657, 2489
SspDI GGCGCC 1 cut(s) 1008
SspMI CTAG 3 cut(s) 458, 621, 783
SstI GAGCTC 1 cut(s) 898
StyD4I CCNGG 6 cut(s) 836, 928, 1561, 1984, 2011, 2086
StyI CCWWGG 5 cut(s) 149, 542, 782, 1628, 2064
TaaI ACNGT 6 cut(s) 292, 363, 723, 1703, 2165, 2249
TaiI ACGT 5 cut(s) 1168, 1216, 1288, 2341, 2371
TaqII GACCGA 1 cut(s) 787
TatI WGTACW 1 cut(s) 1830
TauI GCSGC 5 cut(s) 939, 966, 1038, 1041, 1117
Tru1I TTAA 2 cut(s) 2054, 2478
Tru9I TTAA 2 cut(s) 2054, 2478
TscAI CASTG 7 cut(s) 270, 334, 352, 1239, 1470, 2170, 2407
TseI GCWGC 4 cut(s) 70, 509, 1369, 1511
TspDTI ATGAA 9 cut(s) 199, 207, 585, 639, 1308, 1623, 1937, 2438, 2478
TspGWI ACGGA 6 cut(s) 134, 688, 894, 1135, 1255, 1795
TspRI CASTG 7 cut(s) 270, 334, 352, 1239, 1470, 2170, 2407
VpaK11BI GGWCC 4 cut(s) 723, 1149, 1269, 1410
XagI CCTNNNNNAGG 3 cut(s) 984, 1942, 2016
XapI RAATTY 2 cut(s) 86, 258
XbaI TCTAGA 1 cut(s) 620
XceI RCATGY 1 cut(s) 2432
XmaJI CCTAGG 1 cut(s) 782
XmnI GAANNNNTTC 1 cut(s) 1315
XspI CTAG 3 cut(s) 458, 621, 783
ZrmI AGTACT 1 cut(s) 1832
Zsp2I ATGCAT 1 cut(s) 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.