Rroxscaffold_1G00014780

Serine arginine repetitive matrix protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0007711
Physical Location & Seq
Reverse (-)
18369686 .. 18381588
11903 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00014780.1

Sequence Viewer

Length: 2649 bp
ATGGCCGGAGATGGCGGAATCGCCGGAAATCGACAAAACTCTCGTTCGGCTACGGTAACCTTCGTGGCTCAATTCCGAGCTCCACCGGCCGAGCCACCGCAAAGCACCACCACAGGCGTGACCAGGGTGAAGAGACGAGCCACCGATGCCCGCATTCCGTCATGGGGTGGTCGGAGGAGGAAGAAATCGGAGGGAGAAGAAACCGACCAAAGAAGAGAAAGGATCGGTAGAGAGGAGAGAGAAAAACCGGCCATGTTGGCAAACACTGGAGGCTTGAAGCTTATGACACAAGAAAGCAATAGTGGTACTTCGGCTGATCAGGACACGAGGTTTTCTAATAAGCAAGCCAAGCTGCTGAAATCGCAGAAATTTGCACCTGAACTGGAACATTTGGAAGTGAATGGAAAGGAGATTCAAATTTCACTGACTGGATTTATGGAGAAAAATACGGTGAAGTTTATGAGAGAGCTTTGGACGCTTCTTCTCAGTGCGCAAAACAATGCCAGTGGTGTCCCTCAACAGTTTTTGGATGCCAAACAAGAGGAAGCACGGAAAAAGAAGGAGGAGGCAGATGCAATTGAAACTCAGAGAAAGAAAGATAAGGAGATGCTTGAACTAGAGAGATCGAAGAAGATGGAAGGAGGGGTTGATAAGAAATCAAGCAATGCTGCTTTGGAGCCAAACTCAAATCGTGTGTCACCGAGGGCTTCAAGTGATCGTCCTGATGATGAAAGAGGGAATGGCAAGAGGAATGGTGTGAAGCCAAGTAACAAGGTTTCTAGATCTCCAGATTCAGCAGATTCAGATTCATCTTTGTCCCCTCGGTACTATCTCGAACCCTTTGGTGCCTTAAATCTTAAATTACTGCTCGGTTTCATTCTCTATTTTAGGTCCAGCTTCTGGTGCGTCGAGCTCGTTCTCCCTATCATCGTAGGTCACGATCTCCTGGACGTCGCAGGTCACCTCCTCCTTTCCGAAGCCGCAGATCACCCTCACCTTTTCGAGGCCGTAGATCACCCTATCGGCGCCGAAGATCACCCTCGCCTCCCCGCCGCCGCAGATTACCCTCACCTATTCGTAATCGCAGATCACCATCACCCATCCGGCATCGCAGATCACCCTCCCTCTACGGCGACGGACGTCACCTCTTGTACGGCGTCGCAGGTCCCCCTCACCCGCACGTCGCAGATCACCCTCTCCTGTTCGATCATCATATCGAAGATCTCCACGGAACAGCGGAGGTCACCAGTTCGTGGTGGCAGAAGGTCCCCACCTCTTCGACGTAGGTCTCCTTCGCCTTCTGATCGAAGTTCTTCATCTCCTATTCGGCGTGATTCCCCTTCACCAATCAGGAGAACAACAAAGCAGCAGAGATCTCCCCTGCAATCCCATCAAGAAAGAACAAGGTCCATTGAGAACCTGTCTCCAGCGCCACAACAATCTTCTGGTTCTGAGGGGTCACTGCAGAGGGAATCGAAGAATGGAAATGATTACCGCAAAAGAGTTGCAGCTTTGTCACCATCACCAGAGAAGTCTCCTCCAATGTCAGAATCTCCACCAGGTGCAAGGAGTGTGAGGGAAAAGAGGAGATTGTCCAGTCCATATGAAAGTCCTGTGAAACGACCAAGGGAGCAAATTGCTCGTTATGGTAGCTCAAGTCCTTCAAGGAAACCAAGAGAACAAAAACTTTGTCGTGACAGTCCCAAAGAAAGTGAAGAAGAGGAGGATGCGGGTCACAGACCCAAGTCCTTAGAGAGAAGATCAAGAGACACATCACGGATCAGTAAGCAGATAATTTCTCCTGCTAAGATTCCTAATAAGGAAGAGTACTCTCCTGAAAGAGTAGCATCTGGTCAAAGGTTTACTGAATCTAAAAGCTATTTGGATAATACTGAAAGCAGAAACAAAGAGCAGGAAATGAAGAGTGGAAAATCCTCTGGGAGGGGGTCAAATGTACCAATTGTCTATAAAGACTCTCTGCCAGGTGAGACACAACGGTCATCAAATCCTGGTGAAGGTAAAAAAGCTGATGATAAGAACCGCTCTCATTTAAAGAATACCAAGGACAGCGAACATCGTAAACCTGGATCTTTACGCTCATCTGTTGAAATGATTGATCATAGTAATCAGAGTGGCGGTTTGGATTCTGGTTCTGAGGACAGTGACAAAGGCAGAAGCGAAGACAAGGAAAAGAGAAAGAATAAGAGATCAGAGAGGCAAGTGACTTCAGATGATGATTACAGTTATGATTCTGCAATTGAGGACAGAAAGGAGGCTAAAAGGAGGAGGAAAGAGGAAAAGAGGTTGCGGAAGGAGAAGAAGCGCCGAAGACGTGAGGAGCGACGACGCAGAAGGGAAGAACGTCGTGCAGAGAAGCAGAAAATGAAGAACTCCAGTGATGCTTCTGGTTCAGATGGTGAACATGTCACTGGAAGGGGTTTCATTCAAGTGACAATGAAGAAGAGGCTGTTCAGAAGAAACTTGAGATTGAATTGCGCAAGAAGGCTCTCGAATCACTCAAAGCAAAAAAGGGCATCACTTAAGTGGATAAATGAGGATTTCCTGAGCTATTCTCTTGAGTTCAACTTTAAGCAGACCTTGCTCCTAGATTTTCTGGTTGGCAGCTTGAGAGTTCTTCCTGGGACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 map03013 map03015
Pfam Domains
Protein Families
PWI

Protein Analysis

882

Amino Acids

99.51

Weight (kDa)

10.01

Isoelectric Point (pI)

80.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWI PF01480 131 - 168 4.8e-11 PWI domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1996
AatII GACGTC 2 cut(s) 954, 1143
Acc16I TGCGCA 2 cut(s) 492, 2497
Acc36I ACCTGC 2 cut(s) 947, 1153
AccB1I GGYRCC 2 cut(s) 845, 1025
AccB7I CCANNNNNTGG 2 cut(s) 900, 1253
AccBSI CCGCTC 1 cut(s) 2043
AclWI GGATC 3 cut(s) 230, 1787, 2095
AcoI YGGCCR 3 cut(s) 3, 87, 249
AcsI RAATTY 2 cut(s) 368, 417
AcuI CTGAAG 1 cut(s) 2211
AcyI GRCGYC 4 cut(s) 951, 1026, 1140, 1157
AdeI CACNNNGTG 1 cut(s) 1562
AfaI GTAC 5 cut(s) 307, 827, 1153, 1829, 1956
AfiI CCNNNNNNNGG 6 cut(s) 164, 900, 1003, 1253, 1941, 2015
AflII CTTAAG 1 cut(s) 2540
AflIII ACRYGT 1 cut(s) 2422
AjiI CACGTC 2 cut(s) 1182, 2333
AjnI CCWGG 7 cut(s) 122, 945, 1558, 1981, 2008, 2083, 2638
AleI CACNNNNGTG 2 cut(s) 116, 2542
Alw21I GWGCWC 2 cut(s) 82, 915
Alw26I GTCTC 6 cut(s) 127, 1293, 1428, 1539, 1761, 1982
AlwI GGATC 3 cut(s) 230, 1787, 2095
AlwNI CAGNNNCTG 1 cut(s) 900
AoxI GGCC 4 cut(s) 3, 87, 249, 1005
ApeKI GCWGC 5 cut(s) 352, 668, 1366, 1508, 2622
ApoI RAATTY 2 cut(s) 368, 417
ArsI GACNNNNNNTTYG 4 cut(s) 680, 712, 1675, 1707
Asp700I GAANNNNTTC 1 cut(s) 1312
AspLEI GCGC 5 cut(s) 493, 1028, 1432, 2325, 2498
AspS9I GGNCC 4 cut(s) 891, 1165, 1266, 1407
AvaII GGWCC 4 cut(s) 891, 1165, 1266, 1407
BanI GGYRCC 2 cut(s) 845, 1025
BanII GRGCYC 2 cut(s) 82, 915
BarI GAAGNNNNNNTAC 2 cut(s) 1276, 1308
BauI CACGAG 1 cut(s) 325
BbsI GAAGAC 2 cut(s) 2187, 2335
Bbv12I GWGCWC 2 cut(s) 82, 915
BbvI GCAGC 5 cut(s) 339, 655, 1378, 1520, 2634
BccI CCATC 7 cut(s) 5, 628, 1101, 1108, 1398, 1528, 2408
BceAI ACGGC 3 cut(s) 992, 1146, 1170
BcgI CGANNNNNNTGC 2 cut(s) 1622, 1656
BciT130I CCWGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
BclI TGATCA 2 cut(s) 316, 2116
BcoDI GTCTC 6 cut(s) 127, 1293, 1428, 1539, 1761, 1982
BfaI CTAG 3 cut(s) 617, 780, 2606
BfmI CTRYAG 1 cut(s) 1463
BfoI RGCGCY 3 cut(s) 1029, 1433, 2326
BfrI CTTAAG 1 cut(s) 2540
BfuAI ACCTGC 2 cut(s) 947, 1153
BglI GCCNNNNNGGC 1 cut(s) 257
BglII AGATCT 3 cut(s) 782, 1221, 1373
BisI GCNGC 8 cut(s) 353, 669, 981, 1053, 1056, 1367, 1509, 2623
BlsI GCNGC 8 cut(s) 354, 670, 982, 1054, 1057, 1368, 1510, 2624
BmcAI AGTACT 1 cut(s) 1829
Bme1390I CCNGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
Bme18I GGWCC 4 cut(s) 891, 1165, 1266, 1407
BmgBI CACGTC 2 cut(s) 1182, 2333
BmgT120I GGNCC 4 cut(s) 891, 1165, 1266, 1407
BmiI GGNNCC 5 cut(s) 678, 847, 1027, 1167, 1268
BmrFI CCNGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
BmsI GCATC 9 cut(s) 136, 520, 562, 597, 1116, 1717, 1856, 2389, 2543
BoxI GACNNNNGTC 3 cut(s) 1139, 1285, 1744
BpiI GAAGAC 2 cut(s) 2187, 2335
BplI GAGNNNNNCTC 4 cut(s) 668, 700, 2557, 2589
BpmI CTGGAG 4 cut(s) 288, 771, 1410, 2377
Bpu10I CCTNAGC 1 cut(s) 2564
BpuEI CTTGAG 4 cut(s) 1639, 2503, 2597, 2647
BsaBI GATNNNNATC 1 cut(s) 1092
BsaHI GRCGYC 4 cut(s) 951, 1026, 1140, 1157
BsaI GGTCTC 1 cut(s) 1293
BsaJI CCNNGG 7 cut(s) 123, 701, 821, 1227, 1625, 2061, 2639
Bsc4I CCNNNNNNNGG 6 cut(s) 164, 900, 1003, 1253, 1941, 2015
Bse118I RCCGGY 2 cut(s) 85, 247
Bse1I ACTGG 8 cut(s) 271, 387, 433, 504, 1247, 1596, 2394, 2434
Bse3DI GCAATG 1 cut(s) 670
Bse8I GATNNNNATC 1 cut(s) 1092
BseBI CCWGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
BseDI CCNNGG 7 cut(s) 123, 701, 821, 1227, 1625, 2061, 2639
BseGI GGATG 3 cut(s) 535, 1100, 1732
BseJI GATNNNNATC 1 cut(s) 1092
BseLI CCNNNNNNNGG 6 cut(s) 164, 900, 1003, 1253, 1941, 2015
BseMI GCAATG 1 cut(s) 670
BseMII CTCAG 5 cut(s) 499, 599, 1443, 2145, 2555
BseNI ACTGG 8 cut(s) 271, 387, 433, 504, 1247, 1596, 2394, 2434
BseRI GAGGAG 9 cut(s) 190, 248, 578, 956, 1527, 1600, 1736, 2299, 2351
BseX3I CGGCCG 1 cut(s) 87
BseXI GCAGC 5 cut(s) 339, 655, 1378, 1520, 2634
BsgI GTGCAG 1 cut(s) 2388
Bsh1285I CGRYCG 1 cut(s) 90
BshFI GGCC 4 cut(s) 5, 89, 251, 1007
BshNI GGYRCC 2 cut(s) 845, 1025
BsiEI CGRYCG 1 cut(s) 90
BsiHKAI GWGCWC 2 cut(s) 82, 915
BsiSI CCGG 5 cut(s) 6, 24, 86, 248, 1104
BslFI GGGAC 5 cut(s) 497, 802, 1151, 1252, 1686
BslI CCNNNNNNNGG 6 cut(s) 164, 900, 1003, 1253, 1941, 2015
BsmAI GTCTC 6 cut(s) 127, 1293, 1428, 1539, 1761, 1982
BsmBI CGTCTC 1 cut(s) 127
BsmFI GGGAC 5 cut(s) 497, 802, 1151, 1252, 1686
BsmI GAATGC 1 cut(s) 153
BsnI GGCC 4 cut(s) 5, 89, 251, 1007
Bso31I GGTCTC 1 cut(s) 1293
Bsp1286I GDGCHC 2 cut(s) 82, 915
BspANI GGCC 4 cut(s) 5, 89, 251, 1007
BspCNI CTCAG 5 cut(s) 498, 598, 1444, 2146, 2556
BspLI GGNNCC 5 cut(s) 678, 847, 1027, 1167, 1268
BspMAI CTGCAG 1 cut(s) 1467
BspMI ACCTGC 2 cut(s) 947, 1153
BspPI GGATC 3 cut(s) 230, 1787, 2095
BspT107I GGYRCC 2 cut(s) 845, 1025
BspTI CTTAAG 1 cut(s) 2540
BspTNI GGTCTC 1 cut(s) 1293
BsrBI CCGCTC 1 cut(s) 2043
BsrDI GCAATG 1 cut(s) 670
BsrFI RCCGGY 2 cut(s) 85, 247
BsrI ACTGG 8 cut(s) 271, 387, 433, 504, 1247, 1596, 2394, 2434
BssAI RCCGGY 2 cut(s) 85, 247
BssECI CCNNGG 7 cut(s) 123, 701, 821, 1227, 1625, 2061, 2639
BssNI GRCGYC 4 cut(s) 951, 1026, 1140, 1157
BssSI CACGAG 1 cut(s) 325
BssT1I CCWWGG 2 cut(s) 1625, 2061
Bst2BI CACGAG 1 cut(s) 325
Bst2UI CCWGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
Bst4CI ACNGT 7 cut(s) 55, 451, 522, 1700, 1998, 2162, 2243
Bst6I CTCTTC 7 cut(s) 125, 208, 1281, 1713, 1818, 1916, 2456
BstACI GRCGYC 4 cut(s) 951, 1026, 1140, 1157
BstAFI CTTAAG 1 cut(s) 2540
BstAPI GCANNNNNTGC 1 cut(s) 2599
BstC8I GCNNGC 2 cut(s) 151, 345
BstDEI CTNAG 7 cut(s) 485, 585, 1452, 1750, 1806, 2154, 2564
BstDSI CCRYGG 1 cut(s) 1227
BstEII GGTNACC 3 cut(s) 55, 959, 1242
BstENI CCTNNNNNAGG 3 cut(s) 1001, 1939, 2013
BstF5I GGATG 3 cut(s) 535, 1100, 1732
BstH2I RGCGCY 3 cut(s) 1029, 1433, 2326
BstHHI GCGC 5 cut(s) 493, 1028, 1432, 2325, 2498
BstMAI GTCTC 6 cut(s) 127, 1293, 1428, 1539, 1761, 1982
BstMCI CGRYCG 1 cut(s) 90
BstMWI GCNNNNNNNGC 8 cut(s) 86, 146, 257, 349, 361, 475, 903, 2599
BstNI CCWGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
BstNSI RCATGY 1 cut(s) 2426
BstPAI GACNNNNGTC 3 cut(s) 1139, 1285, 1744
BstPI GGTNACC 3 cut(s) 55, 959, 1242
BstSCI CCNGG 7 cut(s) 122, 945, 1558, 1981, 2008, 2083, 2638
BstSFI CTRYAG 1 cut(s) 1463
BstV1I GCAGC 5 cut(s) 339, 655, 1378, 1520, 2634
BstV2I GAAGAC 2 cut(s) 2187, 2335
BstX2I RGATCY 4 cut(s) 782, 1221, 1373, 2087
BstYI RGATCY 4 cut(s) 782, 1221, 1373, 2087
BstZI CGGCCG 1 cut(s) 87
BsuRI GGCC 4 cut(s) 5, 89, 251, 1007
BtgI CCRYGG 1 cut(s) 1227
BtgZI GCGATG 1 cut(s) 1093
BtrI CACGTC 2 cut(s) 1182, 2333
BtsCI GGATG 3 cut(s) 535, 1100, 1732
BtsI GCAGTG 1 cut(s) 1460
BtsIMutI CAGTG 8 cut(s) 264, 422, 493, 511, 1460, 2167, 2401, 2427
BveI ACCTGC 2 cut(s) 947, 1153
Cac8I GCNNGC 2 cut(s) 151, 345
CaiI CAGNNNCTG 1 cut(s) 900
CfoI GCGC 5 cut(s) 493, 1028, 1432, 2325, 2498
Cfr10I RCCGGY 2 cut(s) 85, 247
Cfr13I GGNCC 4 cut(s) 891, 1165, 1266, 1407
CseI GACGC 4 cut(s) 484, 895, 1146, 2355
CsiI ACCWGGT 1 cut(s) 1558
Csp6I GTAC 5 cut(s) 306, 826, 1152, 1828, 1955
CspCI CAANNNNNGTGG 2 cut(s) 487, 522
CviAII CATG 3 cut(s) 162, 253, 2423
CviQI GTAC 5 cut(s) 306, 826, 1152, 1828, 1955
DdeI CTNAG 7 cut(s) 485, 585, 1452, 1750, 1806, 2154, 2564
DinI GGCGCC 1 cut(s) 1027
DraI TTTAAA 1 cut(s) 2052
DraIII CACNNNGTG 1 cut(s) 1562
DrdI GACNNNNNNGTC 1 cut(s) 1996
DseDI GACNNNNNNGTC 1 cut(s) 1996
EaeI YGGCCR 3 cut(s) 3, 87, 249
EagI CGGCCG 1 cut(s) 87
Eam1104I CTCTTC 7 cut(s) 125, 208, 1281, 1713, 1818, 1916, 2456
EarI CTCTTC 7 cut(s) 125, 208, 1281, 1713, 1818, 1916, 2456
EciI GGCGGA 1 cut(s) 30
Ecl136II GAGCTC 2 cut(s) 80, 913
EclXI CGGCCG 1 cut(s) 87
Eco130I CCWWGG 2 cut(s) 1625, 2061
Eco24I GRGCYC 2 cut(s) 82, 915
Eco31I GGTCTC 1 cut(s) 1293
Eco47I GGWCC 4 cut(s) 891, 1165, 1266, 1407
Eco52I CGGCCG 1 cut(s) 87
Eco53kI GAGCTC 2 cut(s) 80, 913
Eco57I CTGAAG 1 cut(s) 2211
Eco91I GGTNACC 3 cut(s) 55, 959, 1242
EcoICRI GAGCTC 2 cut(s) 80, 913
EcoNI CCTNNNNNAGG 3 cut(s) 1001, 1939, 2013
EcoO109I RGGNCCY 2 cut(s) 1165, 1266
EcoO65I GGTNACC 3 cut(s) 55, 959, 1242
EcoRII CCWGG 7 cut(s) 122, 945, 1558, 1981, 2008, 2083, 2638
EcoT14I CCWWGG 2 cut(s) 1625, 2061
EcoT38I GRGCYC 2 cut(s) 82, 915
EgeI GGCGCC 1 cut(s) 1027
EheI GGCGCC 1 cut(s) 1027
ErhI CCWWGG 2 cut(s) 1625, 2061
Esp3I CGTCTC 1 cut(s) 127
FaeI CATG 3 cut(s) 165, 256, 2426
FalI AAGNNNNNCTT 2 cut(s) 2582, 2614
FaqI GGGAC 5 cut(s) 497, 802, 1151, 1252, 1686
FatI CATG 3 cut(s) 161, 252, 2422
FauI CCCGC 4 cut(s) 158, 1057, 1184, 1723
FauNDI CATATG 1 cut(s) 1603
FbaI TGATCA 2 cut(s) 316, 2116
Fnu4HI GCNGC 8 cut(s) 353, 669, 981, 1053, 1056, 1367, 1509, 2623
FokI GGATG 3 cut(s) 542, 1087, 1739
FriOI GRGCYC 2 cut(s) 82, 915
Fsp4HI GCNGC 8 cut(s) 353, 669, 981, 1053, 1056, 1367, 1509, 2623
FspBI CTAG 3 cut(s) 617, 780, 2606
FspI TGCGCA 2 cut(s) 492, 2497
GlaI GCGC 5 cut(s) 492, 1027, 1431, 2324, 2497
GluI GCNGC 8 cut(s) 353, 669, 981, 1053, 1056, 1367, 1509, 2623
GsuI CTGGAG 4 cut(s) 288, 771, 1410, 2377
HaeII RGCGCY 3 cut(s) 1029, 1433, 2326
HaeIII GGCC 4 cut(s) 5, 89, 251, 1007
HapII CCGG 5 cut(s) 6, 24, 86, 248, 1104
HgaI GACGC 4 cut(s) 484, 895, 1146, 2355
HhaI GCGC 5 cut(s) 493, 1028, 1432, 2325, 2498
Hin1I GRCGYC 4 cut(s) 951, 1026, 1140, 1157
Hin1II CATG 3 cut(s) 165, 256, 2426
Hin6I GCGC 5 cut(s) 491, 1026, 1430, 2323, 2496
HinP1I GCGC 5 cut(s) 491, 1026, 1430, 2323, 2496
HindIII AAGCTT 1 cut(s) 278
HpaII CCGG 5 cut(s) 6, 24, 86, 248, 1104
Hpy166II GTNNAC 3 cut(s) 1863, 2081, 2420
Hpy8I GTNNAC 3 cut(s) 1863, 2081, 2420
Hpy99I CGWCG 9 cut(s) 911, 956, 1138, 1162, 1186, 1284, 2346, 2349, 2367
HpyCH4III ACNGT 7 cut(s) 55, 451, 522, 1700, 1998, 2162, 2243
HpyCH4IV ACGT 6 cut(s) 951, 1140, 1181, 1282, 2332, 2362
HpyCH4V TGCA 8 cut(s) 374, 575, 1384, 1465, 1508, 1565, 2255, 2369
HpyF10VI GCNNNNNNNGC 8 cut(s) 86, 146, 257, 349, 361, 475, 903, 2599
HpyF3I CTNAG 7 cut(s) 485, 585, 1452, 1750, 1806, 2154, 2564
HpySE526I ACGT 6 cut(s) 951, 1140, 1181, 1282, 2332, 2362
Hsp92I GRCGYC 4 cut(s) 951, 1026, 1140, 1157
Hsp92II CATG 3 cut(s) 165, 256, 2426
HspAI GCGC 5 cut(s) 491, 1026, 1430, 2323, 2496
KasI GGCGCC 1 cut(s) 1025
Ksp22I TGATCA 2 cut(s) 316, 2116
LmnI GCTCC 5 cut(s) 85, 676, 1630, 2338, 2607
Lsp1109I GCAGC 5 cut(s) 339, 655, 1378, 1520, 2634
LweI GCATC 9 cut(s) 136, 520, 562, 597, 1116, 1717, 1856, 2389, 2543
MabI ACCWGGT 1 cut(s) 1558
MaeI CTAG 3 cut(s) 617, 780, 2606
MaeII ACGT 6 cut(s) 951, 1140, 1181, 1282, 2332, 2362
MbiI CCGCTC 1 cut(s) 2043
MfeI CAATTG 3 cut(s) 576, 1959, 2256
MflI RGATCY 4 cut(s) 782, 1221, 1373, 2087
MhlI GDGCHC 2 cut(s) 82, 915
Mly113I GGCGCC 1 cut(s) 1026
MlyI GAGTC 1 cut(s) 1967
MmeI TCCRAC 1 cut(s) 152
MroXI GAANNNNTTC 1 cut(s) 1312
MseI TTAA 6 cut(s) 851, 858, 2051, 2541, 2589, 2647
MslI CAYNNNNRTG 3 cut(s) 116, 2447, 2542
MspA1I CMGCKG 1 cut(s) 1237
MspCI CTTAAG 1 cut(s) 2540
MspI CCGG 5 cut(s) 6, 24, 86, 248, 1104
MspR9I CCNGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
MunI CAATTG 3 cut(s) 576, 1959, 2256
Mva1269I GAATGC 1 cut(s) 153
MvaI CCWGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
MwoI GCNNNNNNNGC 8 cut(s) 86, 146, 257, 349, 361, 475, 903, 2599
NarI GGCGCC 1 cut(s) 1026
NdeI CATATG 1 cut(s) 1603
NlaIII CATG 3 cut(s) 165, 256, 2426
NlaIV GGNNCC 5 cut(s) 678, 847, 1027, 1167, 1268
NmeAIII GCCGAG 1 cut(s) 115
NsbI TGCGCA 2 cut(s) 492, 2497
NspI RCATGY 1 cut(s) 2426
OliI CACNNNNGTG 2 cut(s) 116, 2542
PciI ACATGT 1 cut(s) 2422
PcsI WCGNNNNNNNCGW 2 cut(s) 936, 2338
PctI GAATGC 1 cut(s) 153
PdmI GAANNNNTTC 1 cut(s) 1312
PflMI CCANNNNNTGG 2 cut(s) 900, 1253
PfoI TCCNGGA 1 cut(s) 945
PkrI GCNGC 8 cut(s) 354, 670, 982, 1054, 1057, 1368, 1510, 2624
PleI GAGTC 1 cut(s) 1967
PluTI GGCGCC 1 cut(s) 1029
PpsI GAGTC 1 cut(s) 1967
PpuMI RGGWCCY 2 cut(s) 1165, 1266
PscI ACATGT 1 cut(s) 2422
PshAI GACNNNNGTC 3 cut(s) 1139, 1285, 1744
Psp124BI GAGCTC 2 cut(s) 82, 915
Psp5II RGGWCCY 2 cut(s) 1165, 1266
Psp6I CCWGG 7 cut(s) 122, 945, 1558, 1981, 2008, 2083, 2638
PspEI GGTNACC 3 cut(s) 55, 959, 1242
PspGI CCWGG 7 cut(s) 122, 945, 1558, 1981, 2008, 2083, 2638
PspN4I GGNNCC 5 cut(s) 678, 847, 1027, 1167, 1268
PspPI GGNCC 4 cut(s) 891, 1165, 1266, 1407
PspPPI RGGWCCY 2 cut(s) 1165, 1266
PstI CTGCAG 1 cut(s) 1467
PstNI CAGNNNCTG 1 cut(s) 900
PsuI RGATCY 4 cut(s) 782, 1221, 1373, 2087
RsaI GTAC 5 cut(s) 307, 827, 1153, 1829, 1956
RsaNI GTAC 5 cut(s) 306, 826, 1152, 1828, 1955
RseI CAYNNNNRTG 3 cut(s) 116, 2447, 2542
SacI GAGCTC 2 cut(s) 82, 915
SaqAI TTAA 6 cut(s) 851, 858, 2051, 2541, 2589, 2647
SatI GCNGC 8 cut(s) 353, 669, 981, 1053, 1056, 1367, 1509, 2623
Sau96I GGNCC 4 cut(s) 891, 1165, 1266, 1407
ScaI AGTACT 1 cut(s) 1829
SchI GAGTC 1 cut(s) 1967
ScrFI CCNGG 7 cut(s) 124, 947, 1560, 1983, 2010, 2085, 2640
SduI GDGCHC 2 cut(s) 82, 915
SexAI ACCWGGT 1 cut(s) 1558
SfaNI GCATC 9 cut(s) 136, 520, 562, 597, 1116, 1717, 1856, 2389, 2543
SfcI CTRYAG 1 cut(s) 1463
SfoI GGCGCC 1 cut(s) 1027
SinI GGWCC 4 cut(s) 891, 1165, 1266, 1407
SmiMI CAYNNNNRTG 3 cut(s) 116, 2447, 2542
SmlI CTYRAG 5 cut(s) 1654, 2482, 2540, 2576, 2626
SmoI CTYRAG 5 cut(s) 1654, 2482, 2540, 2576, 2626
SspDI GGCGCC 1 cut(s) 1025
SspMI CTAG 3 cut(s) 617, 780, 2606
SstI GAGCTC 2 cut(s) 82, 915
StyD4I CCNGG 7 cut(s) 122, 945, 1558, 1981, 2008, 2083, 2638
StyI CCWWGG 2 cut(s) 1625, 2061
TaaI ACNGT 7 cut(s) 55, 451, 522, 1700, 1998, 2162, 2243
TaiI ACGT 6 cut(s) 954, 1143, 1184, 1285, 2335, 2365
TatI WGTACW 1 cut(s) 1827
TauI GCSGC 3 cut(s) 983, 1055, 1058
Tru1I TTAA 6 cut(s) 851, 858, 2051, 2541, 2589, 2647
Tru9I TTAA 6 cut(s) 851, 858, 2051, 2541, 2589, 2647
TscAI CASTG 8 cut(s) 271, 429, 493, 511, 1467, 2167, 2401, 2434
TseI GCWGC 5 cut(s) 352, 668, 1366, 1508, 2622
TspDTI ATGAA 9 cut(s) 744, 798, 865, 1305, 1620, 1934, 2399, 2431, 2471
TspGWI ACGGA 5 cut(s) 147, 565, 1151, 1244, 1792
TspRI CASTG 8 cut(s) 271, 429, 493, 511, 1467, 2167, 2401, 2434
Van91I CCANNNNNTGG 2 cut(s) 900, 1253
Vha464I CTTAAG 1 cut(s) 2540
VpaK11BI GGWCC 4 cut(s) 891, 1165, 1266, 1407
XagI CCTNNNNNAGG 3 cut(s) 1001, 1939, 2013
XapI RAATTY 2 cut(s) 368, 417
XbaI TCTAGA 1 cut(s) 779
XceI RCATGY 1 cut(s) 2426
XmnI GAANNNNTTC 1 cut(s) 1312
XspI CTAG 3 cut(s) 617, 780, 2606
ZraI GACGTC 2 cut(s) 952, 1141
ZrmI AGTACT 1 cut(s) 1829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.