Rh5AG436100

Serine arginine repetitive matrix protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0007711
Physical Location & Seq
Forward (+)
74938960 .. 74943483
4524 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG436100.1

Sequence Viewer

Length: 2430 bp
ATGTCGGGCGGGTTTTTTAGGGGTACTTCGGCTGATCAGGACACGAGGTTTTCTAATAAGCAAGCCAAGCTGCTGAAATCGCAGAAATTTGCACCTGAATTGGAACATTTGGTGGACATGAGGAAGGTGAATATGGATGTGCTCCGTCCATGGATTGCTAATAGGGTAACTGAGCTTCTTGGGTTCGAAGATGAAGTTCTTATCAACTTCATTTATGGTCTTTTGGATGTGAAGGAAGTGAATGGAAAGGAGATTCAAATTTCACTGACTGGATTTATGGAGAAAAATACGGTGAAGTTTATGAGAGAGCTTTGGACGCTTCTTCTCAGTGCGCAAAACAATGCCAGTGGTGTCCCTCAACAGTTCTTGGATGCCAAACAAGAGGAAGCACGAAAAAAGAAGGAGGAGGCAGATGCAATTGAAGCTCAGAGGAAGAAAGATAAGGAGACGCTTGAACTAGAGAGATCGAAGAAGATGGTCCAGCTTCTGGGTAGTCATATTTTAGTGGTACCTGAAGTAATGCTGAGCATGCTTTGTTACTCGTTTGGTGAACAAGACAGGTCAAGAAGTGTATCCATTTCACCAAAAGCACGAGGACGGTCCATTTCTTCTGAAAGGGGAAGGGGTTATCGCTCTCCACAAAGACGACCGATTACGCCTAGGAGGCGTTCACCTGAGGGATCACTCTCCCCAAAAGGAAGATCACCTTATTCCAGGCGAGGATCAAGATCAAAATCACCACGCAGATCGCGCTCTCCTATAGTGCGTCGAGCTCGTTCTCCCTATCATCGTAGGTCACGATCTCCTGGACGCCGCAGGTCACCTCCTCCTTTCCGAAGCCGCAGATCACCCTCACCTTTTCGAGGCCGTAGATCACCCTATCGGCGCCGAAGATCACCCTCACCTCCCCGCCGCCGCAGATTACCCTCACCTATTCGTAATCGCAGATCACCATCACCTATCCGGCGTCGCAGATCACCCTCCCCTCTGCGGCGACGGACGTCACCTCTTGTACGGCGTCGCAGGTCCCCCTCACCCGCACGTCGCAGATCACCCTCTCCTGTTCGATCATCATATCGAAGATCTCCACGGAACAGGTATGCATCTCCAGTGCAACGGAGGTCACCAGTTCGTGGTGGCAGAAGGTCCCCACCTCTTCGACGTAGGTCTCCTTCGCCTTCTGATCGAAGTTCTTCATCTCCTATTCGGCGTGATTCCCCTTCACCAATCAGGAGAACAGCAAAGCAGCAGAGATCTCCCCTGCAATCCCACCAAGAAAGAACAAGGTCCATTGAGAACCTGTCTCCAGCGCCACAACAATCTTCTGGTTCTGAGGGGTCACTGCAGAGGGAATCGAAGAATGGAAATGATTACCGCAAAAGAGTTGCAGCTTTGTCACCATCACCAGAGAAGTCTCCTCCAATGTCAGAATCTCCACCAGGTGCAAGGAGTGTGAGGGAAAAGAGGAGATTGTCCAGTCCATATGAAAGTCCTGTGAAACGACCAAGGGAGCAAATTGCTCGTTATGGTAGCTCAAGTCCTTCAAGGAAACCAAGAGAACAAAAACTTCGTCGTGACAGTCCCAAAGAAAGTGAAGAAGAGGAGGATGCGGGTCACAGACCCAAGTCCTTAGAGAGAAGATCAAGAGACACATCACGGATCAGTAAGCAGATAATTTCTCCTGCTAAGATTCCTAATAAGGAAGAGTACTCTCCTGAAAGAGTAGCATCTGGTCAAAGGTTTACTGAATCTAAAAGCTATTTGGATAATACTGAAAGCAGAAACAAAGAGCAGGAAATGAAGAGTGGAAAATCCTCTGGGAGGGGGTCAAATGTACCAATTGTCTATAAAGACTATCTGCCAGGTGAGACACAACGGGCATCAAATCCTGGTGAAGGTAAAAAGGCTGATGATAAGAACCGCTCTCATTTAAAGAATACCAAGGACAGCGAACATCGTAAACCTGGATCTTTACGCTCATCTGTTGAAATGATTGATCATAGTAATCAGAGTGGCGGTTTGGATTCTGGTTCTGAGGACAGTGACAAAGGCAGAAGCGAAGACAAGGAAAAGAGAAAGAATAAGAGATCAGAGAGGCAAGAAGTGACTTCAGATGATGATTACAGTTATGATTCTGCAATTGAGGACAGAAAGGAGGCTAAAAGGAGGAGGAAAGAGGAAAAGAGGTTGCGGAAGGAGAAGAAGCGCCGAAGACGTGAGGAGCGACGACGCAGAAGGGAAGAACGTCGTGCAGAGAAGCAGAAAGTGAAGAACTCCAGTGATGCTTCTGGTTCAGATGGTGAACATGTCACCGGAAGGGGGTTTCATTCAAGTGACAATGAAGAAGAGGCTGTTAAGAAGAAACTTGAGATTGAATTGCGCAAGAAGGCTCTCGAATCACTCAAAGCAAAAAAGGGCATCAGTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 map03013 map03015
Pfam Domains
Protein Families
PWI

Protein Analysis

809

Amino Acids

93.3

Weight (kDa)

11.24

Isoelectric Point (pI)

126.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWI PF01480 46 - 115 5.4e-27 PWI domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1004
Acc16I TGCGCA 2 cut(s) 333, 2381
Acc36I ACCTGC 2 cut(s) 807, 1014
Acc65I GGTACC 1 cut(s) 508
AccB1I GGYRCC 2 cut(s) 508, 885
AccB7I CCANNNNNTGG 2 cut(s) 487, 1133
AccBSI CCGCTC 1 cut(s) 1923
AccII CGCG 1 cut(s) 751
AclWI GGATC 4 cut(s) 688, 730, 1667, 1975
AcsI RAATTY 2 cut(s) 86, 258
AcuI CTGAAG 2 cut(s) 534, 2094
AcyI GRCGYC 5 cut(s) 811, 886, 967, 1001, 1018
AdeI CACNNNGTG 1 cut(s) 1442
AfaI GTAC 5 cut(s) 25, 510, 1014, 1709, 1836
AfiI CCNNNNNNNGG 7 cut(s) 487, 863, 990, 1133, 1821, 1895, 2319
AflIII ACRYGT 1 cut(s) 2305
AgsI TTSAA 7 cut(s) 257, 422, 455, 1545, 1988, 2331, 2375
AjiI CACGTC 2 cut(s) 1043, 2216
AjnI CCWGG 6 cut(s) 713, 805, 1438, 1861, 1888, 1963
AluBI AGCT 9 cut(s) 70, 175, 310, 425, 484, 773, 1391, 1533, 1758
AluI AGCT 9 cut(s) 70, 175, 310, 425, 484, 773, 1391, 1533, 1758
Alw21I GWGCWC 2 cut(s) 144, 775
Alw26I GTCTC 6 cut(s) 440, 1173, 1308, 1419, 1641, 1862
AlwI GGATC 4 cut(s) 688, 730, 1667, 1975
AlwNI CAGNNNCTG 1 cut(s) 487
AoxI GGCC 1 cut(s) 865
ApeKI GCWGC 3 cut(s) 70, 1246, 1388
ApoI RAATTY 2 cut(s) 86, 258
ArsI GACNNNNNNTTYG 2 cut(s) 1555, 1587
Asp700I GAANNNNTTC 1 cut(s) 1192
Asp718I GGTACC 1 cut(s) 508
AspA2I CCTAGG 1 cut(s) 659
AspLEI GCGC 6 cut(s) 334, 753, 888, 1312, 2208, 2382
AspS9I GGNCC 5 cut(s) 478, 600, 1026, 1146, 1287
AsuII TTCGAA 1 cut(s) 186
AvaII GGWCC 5 cut(s) 478, 600, 1026, 1146, 1287
AvrII CCTAGG 1 cut(s) 659
AxyI CCTNAGG 1 cut(s) 675
BanI GGYRCC 2 cut(s) 508, 885
BanII GRGCYC 1 cut(s) 775
BarI GAAGNNNNNNTAC 4 cut(s) 159, 191, 1156, 1188
BauI CACGAG 2 cut(s) 43, 591
BbsI GAAGAC 2 cut(s) 2067, 2218
Bbv12I GWGCWC 2 cut(s) 144, 775
BbvI GCAGC 3 cut(s) 57, 1258, 1400
BccI CCATC 4 cut(s) 469, 961, 1408, 2291
BceAI ACGGC 2 cut(s) 852, 1031
BcgI CGANNNNNNTGC 2 cut(s) 1502, 1536
BciT130I CCWGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
BciVI GTATCC 1 cut(s) 583
BclI TGATCA 2 cut(s) 34, 1996
BcoDI GTCTC 6 cut(s) 440, 1173, 1308, 1419, 1641, 1862
BfaI CTAG 2 cut(s) 458, 660
BfmI CTRYAG 2 cut(s) 759, 1343
BfoI RGCGCY 3 cut(s) 889, 1313, 2209
BfuAI ACCTGC 2 cut(s) 807, 1014
BfuI GTATCC 1 cut(s) 583
BglI GCCNNNNNGGC 1 cut(s) 664
BglII AGATCT 2 cut(s) 1082, 1253
BisI GCNGC 8 cut(s) 71, 814, 841, 913, 916, 992, 1247, 1389
BlnI CCTAGG 1 cut(s) 659
BlpI GCTNAGC 1 cut(s) 524
BlsI GCNGC 8 cut(s) 72, 815, 842, 914, 917, 993, 1248, 1390
BmcAI AGTACT 1 cut(s) 1709
Bme1390I CCNGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
Bme18I GGWCC 5 cut(s) 478, 600, 1026, 1146, 1287
BmgBI CACGTC 2 cut(s) 1043, 2216
BmgT120I GGNCC 5 cut(s) 478, 600, 1026, 1146, 1287
BmiI GGNNCC 4 cut(s) 510, 887, 1028, 1148
BmrFI CCNGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
BmsI GCATC 7 cut(s) 361, 403, 1112, 1597, 1736, 1889, 2272
BoxI GACNNNNGTC 3 cut(s) 1000, 1165, 1624
BpiI GAAGAC 2 cut(s) 2067, 2218
BpmI CTGGAG 3 cut(s) 1092, 1290, 2260
Bpu1102I GCTNAGC 1 cut(s) 524
Bpu14I TTCGAA 1 cut(s) 186
BpuEI CTTGAG 2 cut(s) 1519, 2387
BsaBI GATNNNNATC 3 cut(s) 727, 733, 952
BsaHI GRCGYC 5 cut(s) 811, 886, 967, 1001, 1018
BsaI GGTCTC 1 cut(s) 1173
BsaJI CCNNGG 5 cut(s) 149, 659, 1088, 1505, 1941
BsaWI WCCGGW 1 cut(s) 2312
Bsc4I CCNNNNNNNGG 7 cut(s) 487, 863, 990, 1133, 1821, 1895, 2319
Bse1I ACTGG 6 cut(s) 274, 345, 1109, 1127, 1476, 2277
Bse21I CCTNAGG 1 cut(s) 675
Bse8I GATNNNNATC 3 cut(s) 727, 733, 952
BseBI CCWGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
BseDI CCNNGG 5 cut(s) 149, 659, 1088, 1505, 1941
BseGI GGATG 4 cut(s) 142, 232, 376, 1612
BseJI GATNNNNATC 3 cut(s) 727, 733, 952
BseLI CCNNNNNNNGG 7 cut(s) 487, 863, 990, 1133, 1821, 1895, 2319
BseMII CTCAG 7 cut(s) 162, 340, 440, 515, 666, 1323, 2025
BseNI ACTGG 6 cut(s) 274, 345, 1109, 1127, 1476, 2277
BseRI GAGGAG 7 cut(s) 419, 816, 1407, 1480, 1616, 2182, 2234
BseXI GCAGC 3 cut(s) 57, 1258, 1400
BsgI GTGCAG 1 cut(s) 2271
Bsh1236I CGCG 1 cut(s) 751
Bsh1285I CGRYCG 1 cut(s) 650
BshFI GGCC 1 cut(s) 867
BshNI GGYRCC 2 cut(s) 508, 885
BsiEI CGRYCG 1 cut(s) 650
BsiHKAI GWGCWC 2 cut(s) 144, 775
BsiSI CCGG 2 cut(s) 964, 2313
BslFI GGGAC 4 cut(s) 338, 1012, 1132, 1566
BslI CCNNNNNNNGG 7 cut(s) 487, 863, 990, 1133, 1821, 1895, 2319
BsmAI GTCTC 6 cut(s) 440, 1173, 1308, 1419, 1641, 1862
BsmBI CGTCTC 1 cut(s) 440
BsmFI GGGAC 4 cut(s) 338, 1012, 1132, 1566
BsnI GGCC 1 cut(s) 867
Bso31I GGTCTC 1 cut(s) 1173
Bsp119I TTCGAA 1 cut(s) 186
Bsp1286I GDGCHC 2 cut(s) 144, 775
Bsp1720I GCTNAGC 1 cut(s) 524
Bsp19I CCATGG 1 cut(s) 149
BspANI GGCC 1 cut(s) 867
BspCNI CTCAG 7 cut(s) 163, 339, 439, 516, 667, 1324, 2026
BspFNI CGCG 1 cut(s) 751
BspLI GGNNCC 4 cut(s) 510, 887, 1028, 1148
BspMAI CTGCAG 1 cut(s) 1347
BspMI ACCTGC 2 cut(s) 807, 1014
BspPI GGATC 4 cut(s) 688, 730, 1667, 1975
BspT104I TTCGAA 1 cut(s) 186
BspT107I GGYRCC 2 cut(s) 508, 885
BspTNI GGTCTC 1 cut(s) 1173
BsrBI CCGCTC 1 cut(s) 1923
BsrI ACTGG 6 cut(s) 274, 345, 1109, 1127, 1476, 2277
BssECI CCNNGG 5 cut(s) 149, 659, 1088, 1505, 1941
BssNI GRCGYC 5 cut(s) 811, 886, 967, 1001, 1018
BssSI CACGAG 2 cut(s) 43, 591
BssT1I CCWWGG 4 cut(s) 149, 659, 1505, 1941
Bst2BI CACGAG 2 cut(s) 43, 591
Bst2UI CCWGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
Bst4CI ACNGT 6 cut(s) 292, 363, 600, 1580, 2042, 2126
Bst6I CTCTTC 5 cut(s) 1161, 1593, 1698, 1796, 2340
BstACI GRCGYC 5 cut(s) 811, 886, 967, 1001, 1018
BstBI TTCGAA 1 cut(s) 186
BstC8I GCNNGC 2 cut(s) 63, 530
BstDEI CTNAG 9 cut(s) 171, 326, 426, 524, 675, 1332, 1630, 1686, 2034
BstDSI CCRYGG 2 cut(s) 149, 1088
BstEII GGTNACC 2 cut(s) 819, 1122
BstENI CCTNNNNNAGG 3 cut(s) 861, 1819, 1893
BstF5I GGATG 4 cut(s) 142, 232, 376, 1612
BstFNI CGCG 1 cut(s) 751
BstH2I RGCGCY 3 cut(s) 889, 1313, 2209
BstHHI GCGC 6 cut(s) 334, 753, 888, 1312, 2208, 2382
BstMAI GTCTC 6 cut(s) 440, 1173, 1308, 1419, 1641, 1862
BstMCI CGRYCG 1 cut(s) 650
BstMWI GCNNNNNNNGC 7 cut(s) 67, 79, 316, 422, 529, 664, 750
BstNI CCWGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
BstNSI RCATGY 2 cut(s) 532, 2309
BstPAI GACNNNNGTC 3 cut(s) 1000, 1165, 1624
BstPI GGTNACC 2 cut(s) 819, 1122
BstSCI CCNGG 6 cut(s) 713, 805, 1438, 1861, 1888, 1963
BstSFI CTRYAG 2 cut(s) 759, 1343
BstUI CGCG 1 cut(s) 751
BstV1I GCAGC 3 cut(s) 57, 1258, 1400
BstV2I GAAGAC 2 cut(s) 2067, 2218
BstX2I RGATCY 3 cut(s) 1082, 1253, 1967
BstYI RGATCY 3 cut(s) 1082, 1253, 1967
Bsu36I CCTNAGG 1 cut(s) 675
BsuI GTATCC 1 cut(s) 583
BsuRI GGCC 1 cut(s) 867
BtgI CCRYGG 2 cut(s) 149, 1088
BtrI CACGTC 2 cut(s) 1043, 2216
BtsCI GGATG 4 cut(s) 142, 232, 376, 1612
BtsI GCAGTG 1 cut(s) 1340
BtsIMutI CAGTG 7 cut(s) 263, 334, 352, 1116, 1340, 2047, 2284
BveI ACCTGC 2 cut(s) 807, 1014
Cac8I GCNNGC 2 cut(s) 63, 530
CaiI CAGNNNCTG 1 cut(s) 487
CfoI GCGC 6 cut(s) 334, 753, 888, 1312, 2208, 2382
Cfr13I GGNCC 5 cut(s) 478, 600, 1026, 1146, 1287
CseI GACGC 7 cut(s) 325, 457, 755, 819, 956, 1007, 2238
CsiI ACCWGGT 1 cut(s) 1438
Csp6I GTAC 5 cut(s) 24, 509, 1013, 1708, 1835
CspCI CAANNNNNGTGG 2 cut(s) 328, 363
CviAII CATG 4 cut(s) 118, 150, 529, 2306
CviQI GTAC 5 cut(s) 24, 509, 1013, 1708, 1835
DdeI CTNAG 9 cut(s) 171, 326, 426, 524, 675, 1332, 1630, 1686, 2034
DinI GGCGCC 1 cut(s) 887
DraI TTTAAA 1 cut(s) 1932
DraIII CACNNNGTG 1 cut(s) 1442
Eam1104I CTCTTC 5 cut(s) 1161, 1593, 1698, 1796, 2340
EarI CTCTTC 5 cut(s) 1161, 1593, 1698, 1796, 2340
Ecl136II GAGCTC 1 cut(s) 773
Eco130I CCWWGG 4 cut(s) 149, 659, 1505, 1941
Eco24I GRGCYC 1 cut(s) 775
Eco31I GGTCTC 1 cut(s) 1173
Eco47I GGWCC 5 cut(s) 478, 600, 1026, 1146, 1287
Eco53kI GAGCTC 1 cut(s) 773
Eco57I CTGAAG 2 cut(s) 534, 2094
Eco81I CCTNAGG 1 cut(s) 675
Eco91I GGTNACC 2 cut(s) 819, 1122
EcoICRI GAGCTC 1 cut(s) 773
EcoNI CCTNNNNNAGG 3 cut(s) 861, 1819, 1893
EcoO109I RGGNCCY 2 cut(s) 1026, 1146
EcoO65I GGTNACC 2 cut(s) 819, 1122
EcoRII CCWGG 6 cut(s) 713, 805, 1438, 1861, 1888, 1963
EcoT14I CCWWGG 4 cut(s) 149, 659, 1505, 1941
EcoT22I ATGCAT 1 cut(s) 1105
EcoT38I GRGCYC 1 cut(s) 775
EgeI GGCGCC 1 cut(s) 887
EheI GGCGCC 1 cut(s) 887
ErhI CCWWGG 4 cut(s) 149, 659, 1505, 1941
Esp3I CGTCTC 1 cut(s) 440
FaeI CATG 4 cut(s) 121, 153, 532, 2309
FalI AAGNNNNNCTT 2 cut(s) 691, 723
FaqI GGGAC 4 cut(s) 338, 1012, 1132, 1566
FatI CATG 4 cut(s) 117, 149, 528, 2305
FauI CCCGC 4 cut(s) 2, 917, 1045, 1603
FauNDI CATATG 1 cut(s) 1483
FbaI TGATCA 2 cut(s) 34, 1996
Fnu4HI GCNGC 8 cut(s) 71, 814, 841, 913, 916, 992, 1247, 1389
FokI GGATG 4 cut(s) 149, 239, 383, 1619
FriOI GRGCYC 1 cut(s) 775
Fsp4HI GCNGC 8 cut(s) 71, 814, 841, 913, 916, 992, 1247, 1389
FspBI CTAG 2 cut(s) 458, 660
FspI TGCGCA 2 cut(s) 333, 2381
GlaI GCGC 6 cut(s) 333, 752, 887, 1311, 2207, 2381
GluI GCNGC 8 cut(s) 71, 814, 841, 913, 916, 992, 1247, 1389
GsuI CTGGAG 3 cut(s) 1092, 1290, 2260
HaeII RGCGCY 3 cut(s) 889, 1313, 2209
HaeIII GGCC 1 cut(s) 867
HapII CCGG 2 cut(s) 964, 2313
HgaI GACGC 7 cut(s) 325, 457, 755, 819, 956, 1007, 2238
HhaI GCGC 6 cut(s) 334, 753, 888, 1312, 2208, 2382
Hin1I GRCGYC 5 cut(s) 811, 886, 967, 1001, 1018
Hin1II CATG 4 cut(s) 121, 153, 532, 2309
Hin6I GCGC 6 cut(s) 332, 751, 886, 1310, 2206, 2380
HinP1I GCGC 6 cut(s) 332, 751, 886, 1310, 2206, 2380
HinfI GANTC 9 cut(s) 253, 1214, 1352, 1430, 1690, 1748, 2024, 2132, 2396
HpaII CCGG 2 cut(s) 964, 2313
Hpy166II GTNNAC 6 cut(s) 115, 551, 671, 1743, 1961, 2303
Hpy188III TCNNGA 9 cut(s) 38, 564, 726, 798, 1231, 1574, 1644, 1715, 2393
Hpy8I GTNNAC 6 cut(s) 115, 551, 671, 1743, 1961, 2303
HpyCH4III ACNGT 6 cut(s) 292, 363, 600, 1580, 2042, 2126
HpyCH4IV ACGT 5 cut(s) 1001, 1042, 1162, 2215, 2245
HpyF10VI GCNNNNNNNGC 7 cut(s) 67, 79, 316, 422, 529, 664, 750
HpyF3I CTNAG 9 cut(s) 171, 326, 426, 524, 675, 1332, 1630, 1686, 2034
HpySE526I ACGT 5 cut(s) 1001, 1042, 1162, 2215, 2245
Hsp92I GRCGYC 5 cut(s) 811, 886, 967, 1001, 1018
Hsp92II CATG 4 cut(s) 121, 153, 532, 2309
HspAI GCGC 6 cut(s) 332, 751, 886, 1310, 2206, 2380
KasI GGCGCC 1 cut(s) 885
KpnI GGTACC 1 cut(s) 512
Ksp22I TGATCA 2 cut(s) 34, 1996
LmnI GCTCC 3 cut(s) 147, 1510, 2221
Lsp1109I GCAGC 3 cut(s) 57, 1258, 1400
LweI GCATC 7 cut(s) 361, 403, 1112, 1597, 1736, 1889, 2272
MabI ACCWGGT 1 cut(s) 1438
MaeI CTAG 2 cut(s) 458, 660
MaeII ACGT 5 cut(s) 1001, 1042, 1162, 2215, 2245
MbiI CCGCTC 1 cut(s) 1923
MfeI CAATTG 3 cut(s) 417, 1839, 2139
MflI RGATCY 3 cut(s) 1082, 1253, 1967
MhlI GDGCHC 2 cut(s) 144, 775
MluCI AATT 9 cut(s) 86, 98, 258, 417, 1515, 1674, 1839, 2139, 2375
Mly113I GGCGCC 1 cut(s) 886
Mph1103I ATGCAT 1 cut(s) 1105
MroXI GAANNNNTTC 1 cut(s) 1192
MseI TTAA 2 cut(s) 1931, 2355
MslI CAYNNNNRTG 1 cut(s) 2331
MspI CCGG 2 cut(s) 964, 2313
MspR9I CCNGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
MunI CAATTG 3 cut(s) 417, 1839, 2139
MvaI CCWGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
MvnI CGCG 1 cut(s) 751
MwoI GCNNNNNNNGC 7 cut(s) 67, 79, 316, 422, 529, 664, 750
NarI GGCGCC 1 cut(s) 886
NcoI CCATGG 1 cut(s) 149
NdeI CATATG 1 cut(s) 1483
NlaIII CATG 4 cut(s) 121, 153, 532, 2309
NlaIV GGNNCC 4 cut(s) 510, 887, 1028, 1148
NsbI TGCGCA 2 cut(s) 333, 2381
NsiI ATGCAT 1 cut(s) 1105
NspI RCATGY 2 cut(s) 532, 2309
NspV TTCGAA 1 cut(s) 186
PaeI GCATGC 1 cut(s) 532
PciI ACATGT 1 cut(s) 2305
PcsI WCGNNNNNNNCGW 2 cut(s) 796, 2221
PdmI GAANNNNTTC 1 cut(s) 1192
PfeI GAWTC 9 cut(s) 253, 1214, 1352, 1430, 1690, 1748, 2024, 2132, 2396
PflMI CCANNNNNTGG 2 cut(s) 487, 1133
PfoI TCCNGGA 1 cut(s) 805
PkrI GCNGC 8 cut(s) 72, 815, 842, 914, 917, 993, 1248, 1390
PluTI GGCGCC 1 cut(s) 889
PpuMI RGGWCCY 2 cut(s) 1026, 1146
PscI ACATGT 1 cut(s) 2305
PshAI GACNNNNGTC 3 cut(s) 1000, 1165, 1624
Psp124BI GAGCTC 1 cut(s) 775
Psp5II RGGWCCY 2 cut(s) 1026, 1146
Psp6I CCWGG 6 cut(s) 713, 805, 1438, 1861, 1888, 1963
PspEI GGTNACC 2 cut(s) 819, 1122
PspGI CCWGG 6 cut(s) 713, 805, 1438, 1861, 1888, 1963
PspN4I GGNNCC 4 cut(s) 510, 887, 1028, 1148
PspPI GGNCC 5 cut(s) 478, 600, 1026, 1146, 1287
PspPPI RGGWCCY 2 cut(s) 1026, 1146
PstI CTGCAG 1 cut(s) 1347
PstNI CAGNNNCTG 1 cut(s) 487
PsuI RGATCY 3 cut(s) 1082, 1253, 1967
RsaI GTAC 5 cut(s) 25, 510, 1014, 1709, 1836
RsaNI GTAC 5 cut(s) 24, 509, 1013, 1708, 1835
RseI CAYNNNNRTG 1 cut(s) 2331
SacI GAGCTC 1 cut(s) 775
SaqAI TTAA 2 cut(s) 1931, 2355
SatI GCNGC 8 cut(s) 71, 814, 841, 913, 916, 992, 1247, 1389
Sau96I GGNCC 5 cut(s) 478, 600, 1026, 1146, 1287
ScaI AGTACT 1 cut(s) 1709
ScrFI CCNGG 6 cut(s) 715, 807, 1440, 1863, 1890, 1965
SduI GDGCHC 2 cut(s) 144, 775
SexAI ACCWGGT 1 cut(s) 1438
SfaNI GCATC 7 cut(s) 361, 403, 1112, 1597, 1736, 1889, 2272
SfcI CTRYAG 2 cut(s) 759, 1343
SfoI GGCGCC 1 cut(s) 887
SfuI TTCGAA 1 cut(s) 186
SinI GGWCC 5 cut(s) 478, 600, 1026, 1146, 1287
SmiMI CAYNNNNRTG 1 cut(s) 2331
SmlI CTYRAG 2 cut(s) 1534, 2366
SmoI CTYRAG 2 cut(s) 1534, 2366
SphI GCATGC 1 cut(s) 532
Sse9I AATT 9 cut(s) 86, 98, 258, 417, 1515, 1674, 1839, 2139, 2375
SspDI GGCGCC 1 cut(s) 885
SspMI CTAG 2 cut(s) 458, 660
SstI GAGCTC 1 cut(s) 775
StyD4I CCNGG 6 cut(s) 713, 805, 1438, 1861, 1888, 1963
StyI CCWWGG 4 cut(s) 149, 659, 1505, 1941
TaaI ACNGT 6 cut(s) 292, 363, 600, 1580, 2042, 2126
TaiI ACGT 5 cut(s) 1004, 1045, 1165, 2218, 2248
TaqII GACCGA 1 cut(s) 664
TasI AATT 9 cut(s) 86, 98, 258, 417, 1515, 1674, 1839, 2139, 2375
TatI WGTACW 1 cut(s) 1707
TauI GCSGC 5 cut(s) 816, 843, 915, 918, 994
TfiI GAWTC 9 cut(s) 253, 1214, 1352, 1430, 1690, 1748, 2024, 2132, 2396
Tru1I TTAA 2 cut(s) 1931, 2355
Tru9I TTAA 2 cut(s) 1931, 2355
TscAI CASTG 7 cut(s) 270, 334, 352, 1116, 1347, 2047, 2284
TseI GCWGC 3 cut(s) 70, 1246, 1388
TspDTI ATGAA 7 cut(s) 199, 207, 1185, 1500, 1814, 2315, 2355
TspGWI ACGGA 5 cut(s) 134, 1012, 1105, 1132, 1672
TspRI CASTG 7 cut(s) 270, 334, 352, 1116, 1347, 2047, 2284
Van91I CCANNNNNTGG 2 cut(s) 487, 1133
VpaK11BI GGWCC 5 cut(s) 478, 600, 1026, 1146, 1287
XagI CCTNNNNNAGG 3 cut(s) 861, 1819, 1893
XapI RAATTY 2 cut(s) 86, 258
XceI RCATGY 2 cut(s) 532, 2309
XmaJI CCTAGG 1 cut(s) 659
XmnI GAANNNNTTC 1 cut(s) 1192
XspI CTAG 2 cut(s) 458, 660
ZraI GACGTC 1 cut(s) 1002
ZrmI AGTACT 1 cut(s) 1709
Zsp2I ATGCAT 1 cut(s) 1105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.