Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0006143

Physical Location & Seq

Genomic Coordinates Forward (+)

32857828 .. 32863156

Gene Structure 5329 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g38500.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGCCCACGGAAACCAGAAGAATGGCGTTCCCGAAGGTGGTGATCGAGCGCGACACCGACTCCGAGCAAAGCTCGTCGGAAGAAGAAGAAGAAGACGACGAACCGGCGGTGTTGGCGGAGAGCGAGAGTGAAGAGAAAGTTGAGGAGCCCAAGAACAAAGGGAAAGCCCCCATTACTATTTCTCTCAAGAAAGTCTGCAAGGTTTGTAAGAAGCCTGGACATGAAGCTGGGTTTAAAGGGGCTACTTACATTGATTGCCCAATGAAACCTTGCTTTCTTTGCAAAATGCCTGGCCACACTACAGTGACATGCCCACATCGAGTAGCTACCGAGTTTGGTGTCGTCCCAGCAACACATAAAAATACCAGAAATGCATTGGAATATGCTTTCGAACGACAGATTAGACCTCGGATTCCTCCGATCAAGCCAGCATATGTGATCCCTGATCAAGTAAGTTGTGCGGTTATCAGATATCACAGTAGACGAGTAACTTGCTTGGAATTCCATCCAACAAACAATAATATCCTTTTGTCAGGAGATAAGAAAGGACAGCTTGGAGTCTGGGACTTCCGCAAAGTATATGAAAAGGTTGTTTATGGAAATGTGCACTCATGTATACTCAACAATATGAAGTTTAGCCCTGCAAGTGATGGTACAGTATATGCTGCGTCCTCAGATGGTACTGTTAGTTGCACTGATGTCGAAACTGGAATTGCATTGTCTCTGATGAACCTTAACCCTGATGGTTGGCAGGGTCCAAGCACCTGGAGAATGCTGTATGGCATGGATATAAATGCAGAGAAAGGTGCTGTACTTGTTGCTGATAACTTTGGTTACCTCTACATGGTTGATACTCGGTCAAATAACAGAACTGGGAAACCAATTTTGATCCATAAGAAAGGTAGCAAAGTTGTTGGACTCCACTGCAATCCTGTTCAACCAGATCTTCTCTTGAGTTGTGGAAACGATCATTTTGCTCGCATATGGGACATTCGTCGAATTGAAGATGGTTCCTCCATTTATGACCTTGCACACAGCCGTGTTGTTAACTCTGCATACTTCTCTCCAGTATCTGGCAGTAAAATTCTCACCACTTCACAGGACAACCGCCTTTGTATTTGGGATTCCATATTTGGCAATATGGATTCCCCAAGCCGAGAGATTGTACACAGTCATGATTTTAATCGCTATCTGACTCCTTTCCGAGCTGAATGGGATCCAAAGGACTCGTTAGAGTCACTTGCAGTTATTGGTCGTTATATAAGTGAAAACTATAATGGAGCTGCTCTGCATCCCATTGATTTCATAGACATCAGTACAGGGCAACTAGTTGCTGAGATCATGGATCCAAACATCACTACAATCAGTCCGGTGAACAAGCTGCATCCACGTGATGATGTTTTGGCATCCGGTAGCTCAAGGTCACTTTTCATTTGGAGGCCTAAGGAAAAGTCTGAGCCTGTGGAACAGATGGATATAGGGAAGATTGTTGTTTGTGACAGAGATGAGAAAAAGAGTAGAAAACGGAAGTTTGGGGGTGAAAGTGATGATTCTGATGATGACAAGTCCATCCCTAAGGGCAAGCAGTTCAAGTCCCAAAAGAAATCTCAGTCCAAAACAAATCTATCTGTTAAGGTCAGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0031461 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04115 ko04120 ko05161 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03420 map04115 map04120 map05161 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

WD40

Protein Analysis

549

Amino Acids

61.38

Weight (kDa)

7.85

Isoelectric Point (pI)

47.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	7 - 99	4.5e-07	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	14 - 103	9e-06	WDR5 beta-propeller domain
Beta-prop_EIPR1	PF23609	20 - 89	1e-05	EIPR1 beta-propeller
WD40_CDC20-Fz	PF24807	70 - 238	6.6e-09	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	130 - 234	2.6e-07	EIPR1 beta-propeller
Beta-prop_THOC3	PF25174	160 - 236	1e-06	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	173 - 237	5.7e-06	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0006143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58760 AT5G58760
fragaria_vesca	FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500
malus_domestica	MD11G1075200.v1.1
prunus_persica	Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1
pyrus_communis	pycom03g05740 pycom11g06250
rosa_chinensis	RchiOBHm_Chr5g0069361
rosa_laevigata	RLG00000036049
rosa_multiflora	Rmu_sc0002658.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011560
rosa_rugosa	Rorug05G0397300
rosa_samantha	Rh5AG453900 Rh5BG472900 Rh5CG495500 Rh5DG485300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1073
AccI	GTMKAC	2 cut(s)	481, 616
AccII	CGCG	1 cut(s)	51
AciI	CCGC	5 cut(s)	107, 116, 461, 571, 1108
AclWI	GGATC	6 cut(s)	433, 883, 1211, 1224, 1340, 1353
AcoI	YGGCCR	1 cut(s)	292
AcsI	RAATTY	2 cut(s)	500, 1083
AcvI	CACGTG	1 cut(s)	1391
AfaI	GTAC	5 cut(s)	655, 682, 813, 1167, 1318
AfiI	CCNNNNNNNGG	3 cut(s)	37, 844, 1073
AgsI	TTSAA	3 cut(s)	938, 1004, 1591
AhlI	ACTAGT	1 cut(s)	1327
AjnI	CCWGG	3 cut(s)	214, 289, 764
AleI	CACNNNNGTG	2 cut(s)	302, 1038
AluBI	AGCT	8 cut(s)	72, 227, 326, 553, 1208, 1283, 1381, 1416
AluI	AGCT	8 cut(s)	72, 227, 326, 553, 1208, 1283, 1381, 1416
Alw21I	GWGCWC	1 cut(s)	609
Alw26I	GTCTC	1 cut(s)	726
Alw44I	GTGCAC	1 cut(s)	605
AlwI	GGATC	6 cut(s)	433, 883, 1211, 1224, 1340, 1353
AlwNI	CAGNNNCTG	2 cut(s)	1073, 1644
AoxI	GGCC	2 cut(s)	292, 1439
ApaLI	GTGCAC	1 cut(s)	605
ApeKI	GCWGC	3 cut(s)	665, 1283, 1381
ApoI	RAATTY	2 cut(s)	500, 1083
AspLEI	GCGC	1 cut(s)	51
AspS9I	GGNCC	1 cut(s)	755
AsuHPI	GGTGA	4 cut(s)	52, 1081, 1384, 1550
AsuII	TTCGAA	1 cut(s)	390
AvaII	GGWCC	1 cut(s)	755
AxyI	CCTNAGG	2 cut(s)	1443, 1575
BaeGI	GKGCMC	1 cut(s)	609
BalI	TGGCCA	1 cut(s)	294
BamHI	GGATCC	2 cut(s)	1216, 1345
BanII	GRGCYC	1 cut(s)	150
BbrPI	CACGTG	1 cut(s)	1391
BbsI	GAAGAC	1 cut(s)	99
Bbv12I	GWGCWC	1 cut(s)	609
BbvI	GCAGC	3 cut(s)	652, 1270, 1368
BccI	CCATC	7 cut(s)	513, 644, 671, 737, 1001, 1465, 1577
BceAI	ACGGC	1 cut(s)	1023
BcgI	CGANNNNNNTGC	6 cut(s)	474, 508, 682, 716, 956, 990
BciT130I	CCWGG	3 cut(s)	216, 291, 766
BclI	TGATCA	1 cut(s)	445
BcoDI	GTCTC	1 cut(s)	726
BcuI	ACTAGT	1 cut(s)	1327
BfaI	CTAG	1 cut(s)	1328
BfmI	CTRYAG	1 cut(s)	300
BglII	AGATCT	1 cut(s)	943
BisI	GCNGC	3 cut(s)	666, 1284, 1382
BlsI	GCNGC	3 cut(s)	667, 1285, 1383
Bme1390I	CCNGG	3 cut(s)	216, 291, 766
Bme18I	GGWCC	1 cut(s)	755
BmgT120I	GGNCC	1 cut(s)	755
BmiI	GGNNCC	5 cut(s)	147, 756, 1012, 1218, 1347
BmrFI	CCNGG	3 cut(s)	216, 291, 766
BmrI	ACTGGG	1 cut(s)	882
BmsI	GCATC	3 cut(s)	1300, 1393, 1415
BmuI	ACTGGG	1 cut(s)	882
BoxI	GACNNNNGTC	1 cut(s)	993
BpiI	GAAGAC	1 cut(s)	99
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	2 cut(s)	787, 1050
Bpu14I	TTCGAA	1 cut(s)	390
BpuEI	CTTGAG	3 cut(s)	170, 973, 1402
BsaAI	YACGTR	1 cut(s)	1391
BsaBI	GATNNNNATC	1 cut(s)	1182
BsaJI	CCNNGG	2 cut(s)	6, 407
BsaWI	WCCGGW	2 cut(s)	1369, 1409
BsaXI	ACNNNNNCTCC	2 cut(s)	44, 74
Bsc4I	CCNNNNNNNGG	3 cut(s)	37, 844, 1073
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	3 cut(s)	712, 877, 1067
Bse21I	CCTNAGG	2 cut(s)	1443, 1575
Bse8I	GATNNNNATC	1 cut(s)	1182
BseBI	CCWGG	3 cut(s)	216, 291, 766
BseDI	CCNNGG	2 cut(s)	6, 407
BseGI	GGATG	5 cut(s)	505, 1291, 1384, 1406, 1569
BseJI	GATNNNNATC	1 cut(s)	1182
BseLI	CCNNNNNNNGG	3 cut(s)	37, 844, 1073
BseMII	CTCAG	4 cut(s)	687, 1326, 1446, 1622
BseNI	ACTGG	3 cut(s)	712, 877, 1067
BseRI	GAGGAG	1 cut(s)	158
BseSI	GKGCMC	1 cut(s)	609
BseXI	GCAGC	3 cut(s)	652, 1270, 1368
BseYI	CCCAGC	2 cut(s)	227, 346
Bsh1236I	CGCG	1 cut(s)	51
BshFI	GGCC	2 cut(s)	294, 1441
BsiHKAI	GWGCWC	1 cut(s)	609
BsiSI	CCGG	3 cut(s)	104, 1370, 1410
BslFI	GGGAC	4 cut(s)	329, 578, 1001, 1579
BslI	CCNNNNNNNGG	3 cut(s)	37, 844, 1073
BsmAI	GTCTC	1 cut(s)	726
BsmFI	GGGAC	4 cut(s)	329, 578, 1001, 1579
BsmI	GAATGC	1 cut(s)	777
BsnI	GGCC	2 cut(s)	294, 1441
Bsp119I	TTCGAA	1 cut(s)	390
Bsp1286I	GDGCHC	2 cut(s)	150, 609
Bsp1407I	TGTACA	1 cut(s)	1165
BspACI	CCGC	5 cut(s)	107, 116, 461, 571, 1108
BspANI	GGCC	2 cut(s)	294, 1441
BspCNI	CTCAG	4 cut(s)	686, 1327, 1447, 1621
BspFNI	CGCG	1 cut(s)	51
BspHI	TCATGA	1 cut(s)	1174
BspLI	GGNNCC	5 cut(s)	147, 756, 1012, 1218, 1347
BspPI	GGATC	6 cut(s)	433, 883, 1211, 1224, 1340, 1353
BspT104I	TTCGAA	1 cut(s)	390
BsrFI	RCCGGY	1 cut(s)	103
BsrGI	TGTACA	1 cut(s)	1165
BsrI	ACTGG	3 cut(s)	712, 877, 1067
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	2 cut(s)	6, 407
BssNAI	GTATAC	1 cut(s)	617
Bst1107I	GTATAC	1 cut(s)	617
Bst2UI	CCWGG	3 cut(s)	216, 291, 766
Bst4CI	ACNGT	5 cut(s)	304, 479, 658, 685, 1172
Bst6I	CTCTTC	1 cut(s)	126
BstAUI	TGTACA	1 cut(s)	1165
BstBAI	YACGTR	1 cut(s)	1391
BstBI	TTCGAA	1 cut(s)	390
BstC8I	GCNNGC	3 cut(s)	429, 979, 1583
BstDEI	CTNAG	6 cut(s)	673, 1335, 1443, 1455, 1575, 1608
BstDSI	CCRYGG	1 cut(s)	6
BstEII	GGTNACC	1 cut(s)	833
BstF5I	GGATG	5 cut(s)	505, 1291, 1384, 1406, 1569
BstFNI	CGCG	1 cut(s)	51
BstHHI	GCGC	1 cut(s)	51
BstMAI	GTCTC	1 cut(s)	726
BstMWI	GCNNNNNNNGC	2 cut(s)	113, 279
BstNI	CCWGG	3 cut(s)	216, 291, 766
BstNSI	RCATGY	1 cut(s)	312
BstPAI	GACNNNNGTC	1 cut(s)	993
BstPI	GGTNACC	1 cut(s)	833
BstSCI	CCNGG	3 cut(s)	214, 289, 764
BstSFI	CTRYAG	1 cut(s)	300
BstSLI	GKGCMC	1 cut(s)	609
BstUI	CGCG	1 cut(s)	51
BstV1I	GCAGC	3 cut(s)	652, 1270, 1368
BstV2I	GAAGAC	1 cut(s)	99
BstX2I	RGATCY	3 cut(s)	943, 1216, 1345
BstXI	CCANNNNNNTGG	2 cut(s)	22, 765
BstYI	RGATCY	3 cut(s)	943, 1216, 1345
BstZ17I	GTATAC	1 cut(s)	617
Bsu36I	CCTNAGG	2 cut(s)	1443, 1575
BsuRI	GGCC	2 cut(s)	294, 1441
BtgI	CCRYGG	1 cut(s)	6
BtsCI	GGATG	5 cut(s)	505, 1291, 1384, 1406, 1569
BtsI	GCAGTG	1 cut(s)	922
BtsIMutI	CAGTG	3 cut(s)	309, 693, 922
Cac8I	GCNNGC	3 cut(s)	429, 979, 1583
CaiI	CAGNNNCTG	2 cut(s)	1073, 1644
CciI	TCATGA	1 cut(s)	1174
CfoI	GCGC	1 cut(s)	51
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	1 cut(s)	755
CseI	GACGC	1 cut(s)	657
Csp6I	GTAC	5 cut(s)	654, 681, 812, 1166, 1317
CviAII	CATG	7 cut(s)	221, 309, 612, 784, 844, 1175, 1342
CviQI	GTAC	5 cut(s)	654, 681, 812, 1166, 1317
DdeI	CTNAG	6 cut(s)	673, 1335, 1443, 1455, 1575, 1608
DraI	TTTAAA	1 cut(s)	235
EaeI	YGGCCR	1 cut(s)	292
Eam1104I	CTCTTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	126
EciI	GGCGGA	1 cut(s)	131
Eco147I	AGGCCT	1 cut(s)	1441
Eco24I	GRGCYC	1 cut(s)	150
Eco32I	GATATC	1 cut(s)	473
Eco47I	GGWCC	1 cut(s)	755
Eco72I	CACGTG	1 cut(s)	1391
Eco81I	CCTNAGG	2 cut(s)	1443, 1575
Eco91I	GGTNACC	1 cut(s)	833
EcoO65I	GGTNACC	1 cut(s)	833
EcoRI	GAATTC	1 cut(s)	500
EcoRII	CCWGG	3 cut(s)	214, 289, 764
EcoRV	GATATC	1 cut(s)	473
EcoT22I	ATGCAT	1 cut(s)	376
EcoT38I	GRGCYC	1 cut(s)	150
FaeI	CATG	7 cut(s)	224, 312, 615, 787, 847, 1178, 1345
FalI	AAGNNNNNCTT	2 cut(s)	537, 569
FaqI	GGGAC	4 cut(s)	329, 578, 1001, 1579
FatI	CATG	7 cut(s)	220, 308, 611, 783, 843, 1174, 1341
FauNDI	CATATG	2 cut(s)	433, 983
FbaI	TGATCA	1 cut(s)	445
FblI	GTMKAC	2 cut(s)	481, 616
Fnu4HI	GCNGC	3 cut(s)	666, 1284, 1382
FokI	GGATG	5 cut(s)	492, 1278, 1371, 1393, 1556
FriOI	GRGCYC	1 cut(s)	150
Fsp4HI	GCNGC	3 cut(s)	666, 1284, 1382
FspBI	CTAG	1 cut(s)	1328
GlaI	GCGC	1 cut(s)	50
GluI	GCNGC	3 cut(s)	666, 1284, 1382
GsaI	CCCAGC	2 cut(s)	231, 350
GsuI	CTGGAG	2 cut(s)	787, 1050
HaeIII	GGCC	2 cut(s)	294, 1441
HapII	CCGG	3 cut(s)	104, 1370, 1410
HgaI	GACGC	1 cut(s)	657
HhaI	GCGC	1 cut(s)	51
Hin1II	CATG	7 cut(s)	224, 312, 615, 787, 847, 1178, 1345
Hin6I	GCGC	1 cut(s)	49
HinP1I	GCGC	1 cut(s)	49
HincII	GTYRAC	1 cut(s)	1048
HindII	GTYRAC	1 cut(s)	1048
HpaI	GTTAAC	1 cut(s)	1048
HpaII	CCGG	3 cut(s)	104, 1370, 1410
HphI	GGTGA	4 cut(s)	52, 1081, 1384, 1550
Hpy166II	GTNNAC	6 cut(s)	482, 607, 617, 1048, 1168, 1375
Hpy188III	TCNNGA	5 cut(s)	31, 187, 534, 952, 1175
Hpy8I	GTNNAC	6 cut(s)	482, 607, 617, 1048, 1168, 1375
Hpy99I	CGWCG	3 cut(s)	79, 101, 999
HpyAV	CCTTC	1 cut(s)	28
HpyCH4III	ACNGT	5 cut(s)	304, 479, 658, 685, 1172
HpyCH4IV	ACGT	1 cut(s)	1390
HpyF10VI	GCNNNNNNNGC	2 cut(s)	113, 279
HpyF3I	CTNAG	6 cut(s)	673, 1335, 1443, 1455, 1575, 1608
HpySE526I	ACGT	1 cut(s)	1390
Hsp92II	CATG	7 cut(s)	224, 312, 615, 787, 847, 1178, 1345
HspAI	GCGC	1 cut(s)	49
Ksp22I	TGATCA	1 cut(s)	445
KspAI	GTTAAC	1 cut(s)	1048
LmnI	GCTCC	2 cut(s)	145, 1280
Lsp1109I	GCAGC	3 cut(s)	652, 1270, 1368
LweI	GCATC	3 cut(s)	1300, 1393, 1415
MaeI	CTAG	1 cut(s)	1328
MaeII	ACGT	1 cut(s)	1390
MaeIII	GTNAC	6 cut(s)	304, 487, 833, 1236, 1422, 1496
MflI	RGATCY	3 cut(s)	943, 1216, 1345
MhlI	GDGCHC	2 cut(s)	150, 609
MlsI	TGGCCA	1 cut(s)	294
MluCI	AATT	5 cut(s)	500, 711, 882, 999, 1083
MluNI	TGGCCA	1 cut(s)	294
MlyI	GAGTC	6 cut(s)	53, 567, 912, 1189, 1220, 1244
MmeI	TCCRAC	3 cut(s)	57, 533, 895
MnlI	CCTC	7 cut(s)	136, 417, 426, 682, 848, 1024, 1431
Mox20I	TGGCCA	1 cut(s)	294
Mph1103I	ATGCAT	1 cut(s)	376
MscI	TGGCCA	1 cut(s)	294
MseI	TTAA	5 cut(s)	234, 735, 1047, 1182, 1632
MslI	CAYNNNNRTG	4 cut(s)	302, 1038, 1173, 1389
Msp20I	TGGCCA	1 cut(s)	294
MspI	CCGG	3 cut(s)	104, 1370, 1410
MspR9I	CCNGG	3 cut(s)	216, 291, 766
Mva1269I	GAATGC	1 cut(s)	777
MvaI	CCWGG	3 cut(s)	216, 291, 766
MvnI	CGCG	1 cut(s)	51
MwoI	GCNNNNNNNGC	2 cut(s)	113, 279
NdeI	CATATG	2 cut(s)	433, 983
NlaIII	CATG	7 cut(s)	224, 312, 615, 787, 847, 1178, 1345
NlaIV	GGNNCC	5 cut(s)	147, 756, 1012, 1218, 1347
NmeAIII	GCCGAG	1 cut(s)	1181
NmuCI	GTSAC	4 cut(s)	304, 1236, 1422, 1496
NsiI	ATGCAT	1 cut(s)	376
NspI	RCATGY	1 cut(s)	312
NspV	TTCGAA	1 cut(s)	390
OliI	CACNNNNGTG	2 cut(s)	302, 1038
PagI	TCATGA	1 cut(s)	1174
PceI	AGGCCT	1 cut(s)	1441
PctI	GAATGC	1 cut(s)	777
PfeI	GAWTC	4 cut(s)	412, 1124, 1145, 1550
PflMI	CCANNNNNTGG	1 cut(s)	1073
PkrI	GCNGC	3 cut(s)	667, 1285, 1383
PleI	GAGTC	6 cut(s)	53, 566, 912, 1189, 1220, 1243
PmaCI	CACGTG	1 cut(s)	1391
PmlI	CACGTG	1 cut(s)	1391
PpsI	GAGTC	6 cut(s)	53, 566, 912, 1189, 1220, 1243
Ppu21I	YACGTR	1 cut(s)	1391
PshAI	GACNNNNGTC	1 cut(s)	993
Psp6I	CCWGG	3 cut(s)	214, 289, 764
PspCI	CACGTG	1 cut(s)	1391
PspEI	GGTNACC	1 cut(s)	833
PspFI	CCCAGC	2 cut(s)	227, 346
PspGI	CCWGG	3 cut(s)	214, 289, 764
PspN4I	GGNNCC	5 cut(s)	147, 756, 1012, 1218, 1347
PspPI	GGNCC	1 cut(s)	755
PstNI	CAGNNNCTG	2 cut(s)	1073, 1644
PsuI	RGATCY	3 cut(s)	943, 1216, 1345
RsaI	GTAC	5 cut(s)	655, 682, 813, 1167, 1318
RsaNI	GTAC	5 cut(s)	654, 681, 812, 1166, 1317
RseI	CAYNNNNRTG	4 cut(s)	302, 1038, 1173, 1389
SaqAI	TTAA	5 cut(s)	234, 735, 1047, 1182, 1632
SatI	GCNGC	3 cut(s)	666, 1284, 1382
Sau96I	GGNCC	1 cut(s)	755
SchI	GAGTC	6 cut(s)	53, 567, 912, 1189, 1220, 1244
ScrFI	CCNGG	3 cut(s)	216, 291, 766
SduI	GDGCHC	2 cut(s)	150, 609
SfaNI	GCATC	3 cut(s)	1300, 1393, 1415
SfcI	CTRYAG	1 cut(s)	300
SfuI	TTCGAA	1 cut(s)	390
SinI	GGWCC	1 cut(s)	755
SmiMI	CAYNNNNRTG	4 cut(s)	302, 1038, 1173, 1389
SmlI	CTYRAG	3 cut(s)	185, 952, 1417
SmoI	CTYRAG	3 cut(s)	185, 952, 1417
SpeI	ACTAGT	1 cut(s)	1327
Sse9I	AATT	5 cut(s)	500, 711, 882, 999, 1083
SseBI	AGGCCT	1 cut(s)	1441
SsiI	CCGC	5 cut(s)	107, 116, 461, 571, 1108
SspMI	CTAG	1 cut(s)	1328
StuI	AGGCCT	1 cut(s)	1441
StyD4I	CCNGG	3 cut(s)	214, 289, 764
TaaI	ACNGT	5 cut(s)	304, 479, 658, 685, 1172
TaiI	ACGT	1 cut(s)	1393
TaqI	TCGA	5 cut(s)	45, 319, 390, 702, 997
TaqII	GACCGA	1 cut(s)	846
TasI	AATT	5 cut(s)	500, 711, 882, 999, 1083
TatI	WGTACW	3 cut(s)	811, 1165, 1316
TfiI	GAWTC	4 cut(s)	412, 1124, 1145, 1550
Tru1I	TTAA	5 cut(s)	234, 735, 1047, 1182, 1632
Tru9I	TTAA	5 cut(s)	234, 735, 1047, 1182, 1632
TscAI	CASTG	3 cut(s)	309, 700, 929
TseFI	GTSAC	4 cut(s)	304, 1236, 1422, 1496
TseI	GCWGC	3 cut(s)	665, 1283, 1381
Tsp45I	GTSAC	4 cut(s)	304, 1236, 1422, 1496
TspDTI	ATGAA	7 cut(s)	237, 278, 597, 644, 743, 1294, 1420
TspGWI	ACGGA	2 cut(s)	23, 1540
TspRI	CASTG	3 cut(s)	309, 700, 929
Van91I	CCANNNNNTGG	1 cut(s)	1073
VneI	GTGCAC	1 cut(s)	605
VpaK11BI	GGWCC	1 cut(s)	755
XapI	RAATTY	2 cut(s)	500, 1083
XceI	RCATGY	1 cut(s)	312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	373
XmiI	GTMKAC	2 cut(s)	481, 616
XspI	CTAG	1 cut(s)	1328
Zsp2I	ATGCAT	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.