Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0006143

Physical Location & Seq

Genomic Coordinates Forward (+)

76301512 .. 76306818

Gene Structure 5307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG485300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGCCCCCGCGGACCAGAAGAATGCCATTTCCGAATGTGGTGATCGAGAGAGACACCGACTCCGAGCAAAGCTCATCGGAAGAAGAAGAAGACGAACCGGCGGTGTTGGTGGAGAGCGAAAATGAAGAGAAAGCTGACGAGGCCAAGAAGAAAGGAAAAGCGCCCATTACTATTTCTCTCAAGAAAGTTTGCAAGGTTTGTAAGAAGCCTGGACATGAAGCTGGATTTAAAGGAGCTACTTATATTGATTGCCCAATGAAACCTTGCTTTCTTTGCAAAATGCCTGGCCATACTACAGTGACATGCCCGCATCGAGTAGCTACCGAGTATGGGGTCATCCCAGCAAAACGTAAAAATACCCGAAATGGATTGGAATATGCGTTCGAACGACAGATTAGACCTCGGATTCCTCCGATCAAGCCAGCATATGTGATCCCTGATCAAGTAAGTTGTGCGGTTATCAGATATCATAGTAGACGGGTAACTTGCTTGGAATTCCATCCAACAAACAATAATATCCTTTTATCAGGAGATAAGAAAGGACAGCTTGGAGTCTGGGATTTTCGCAAAGTATATGAGAAGGTTGTTTATGGAAATGTACACTCATGTATACTAAACAATATGAAGTTTAGCCCTGCAAGTGATGGTACAGTATATGCTGCATCCTCAGATGGAACCGTTAGCTGCACTGATGTCGAGACTGGAATTGCATTGTCTCTGATGAATCTCAACCCTGATGGTTGGCAGGGTCCAAGCACCTGGAGAATGCTGTATGGCATGGATATCAATGCAGAGAAAGGTGCCGTGCTTGTTGCTGATAACTTTGGTTTCCTCTACTTGGTTGATACTCGCTCAAATAACAGAACAGGGAAACCAATTTTGATCCATAAGAAAGGTAGCAAAGTTGTTGGACTTCACTGCAATCCTGTTCAACCAGACCTTCTCTTGAGTTGTGGAAATGATCATTTTGCTCGCATATGGGACATTCGTCGAATTGAAGATGGTTCCTCCATTTATGACCTTGCACACAGCCGTGTTGTTAACTCTGCGTATTTTTCTCCAGTATCTGGCAGTAAAATTCTTACCACTTCACAGGACAACCGTCTTTGTATATGGGATTCCATATTTGGCAATATGGATTCCCCAAGCCGAGAGATTGTACACAGTCATGATTTTAATCGGTATCTGACTCCTTTCCGAGCCGAATGGGATCCAAAGGACCCGTCAGAGTCACTTGCAGTTATTGGTCGTTATATAAGTGAAAACTATAATGGAGCTGCTCTGCATCCCATTGATTTCATAGACATCAGTACAGGGCAACTAGTTGCTGAGATCATGGATCCAAACATTACTACAATCACTCCAGTGAACAAGCTACATCCACGTGATGATGTTTTGGCATCTGGTAGTTCAAGGTCACTTTTCATTTGGCGGCCAAAGGAAAAGTCTGAGCCTGTGGAACAGATGGATGTAGGGAAGATTTTTGTTTGCGACAGAGATGATAAAAAGAGAAGAAAACGGAAGTTTGGGGGTGAAAGTGATGATTCTGATGATGACAGGTCCATCCCCAAGAGCAAGAGGTTTAAGTCCCAAAAGAAATCTCAGTCCAAGTCAAGTCTATCTGTTAAGGTCAGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0031461 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04115 ko04120 ko05161 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03420 map04115 map04120 map05161 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

WD40

Protein Analysis

546

Amino Acids

61.33

Weight (kDa)

8.81

Isoelectric Point (pI)

47.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	154 - 237	1.5e-06	THOC3 beta-propeller domain
Beta-prop_EIPR1	PF23609	157 - 227	8.3e-06	EIPR1 beta-propeller
WD40_CDC20-Fz	PF24807	208 - 377	4.5e-08	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	269 - 372	7.4e-07	EIPR1 beta-propeller
Beta-prop_THOC3	PF25174	300 - 374	2.1e-06	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	311 - 375	9.3e-06	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58760 AT5G58760
fragaria_vesca	FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500
malus_domestica	MD11G1075200.v1.1
prunus_persica	Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1
pyrus_communis	pycom03g05740 pycom11g06250
rosa_chinensis	RchiOBHm_Chr5g0069361
rosa_laevigata	RLG00000036049
rosa_multiflora	Rmu_sc0002658.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011560
rosa_rugosa	Rorug05G0397300
rosa_samantha	Rh5AG453900 Rh5BG472900 Rh5CG495500 Rh5DG485300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	800
AccB7I	CCANNNNNTGG	1 cut(s)	1067
AccI	GTMKAC	2 cut(s)	475, 610
AccII	CGCG	1 cut(s)	10
AciI	CCGC	6 cut(s)	8, 10, 101, 308, 455, 1432
AclWI	GGATC	6 cut(s)	427, 877, 1205, 1218, 1334, 1347
AcoI	YGGCCR	2 cut(s)	286, 1433
AcsI	RAATTY	2 cut(s)	494, 1077
AcvI	CACGTG	1 cut(s)	1385
AfaI	GTAC	4 cut(s)	600, 649, 1161, 1312
AfiI	CCNNNNNNNGG	3 cut(s)	330, 838, 1067
AgsI	TTSAA	3 cut(s)	932, 998, 1413
AhlI	ACTAGT	1 cut(s)	1321
AjnI	CCWGG	3 cut(s)	208, 283, 758
AleI	CACNNNNGTG	2 cut(s)	1032, 1364
AloI	GAACNNNNNNTCC	2 cut(s)	365, 397
AluBI	AGCT	9 cut(s)	72, 134, 221, 236, 320, 547, 684, 1277, 1375
AluI	AGCT	9 cut(s)	72, 134, 221, 236, 320, 547, 684, 1277, 1375
Alw26I	GTCTC	3 cut(s)	45, 692, 720
AlwI	GGATC	6 cut(s)	427, 877, 1205, 1218, 1334, 1347
AlwNI	CAGNNNCTG	2 cut(s)	1067, 1638
AoxI	GGCC	3 cut(s)	141, 286, 1433
ApeKI	GCWGC	3 cut(s)	659, 684, 1277
ApoI	RAATTY	2 cut(s)	494, 1077
ArsI	GACNNNNNNTTYG	4 cut(s)	1208, 1240, 1430, 1462
AspLEI	GCGC	1 cut(s)	163
AspS9I	GGNCC	4 cut(s)	12, 749, 1219, 1560
AsuHPI	GGTGA	2 cut(s)	52, 1544
AsuII	TTCGAA	1 cut(s)	384
AvaII	GGWCC	4 cut(s)	12, 749, 1219, 1560
BalI	TGGCCA	1 cut(s)	288
BamHI	GGATCC	2 cut(s)	1210, 1339
BanI	GGYRCC	1 cut(s)	800
BbrPI	CACGTG	1 cut(s)	1385
BbsI	GAAGAC	1 cut(s)	96
BbvI	GCAGC	3 cut(s)	646, 671, 1264
BccI	CCATC	7 cut(s)	507, 638, 665, 731, 995, 1459, 1571
BceAI	ACGGC	2 cut(s)	788, 1017
BcgI	CGANNNNNNTGC	2 cut(s)	676, 710
BciT130I	CCWGG	3 cut(s)	210, 285, 760
BclI	TGATCA	2 cut(s)	439, 961
BcoDI	GTCTC	3 cut(s)	45, 692, 720
BcuI	ACTAGT	1 cut(s)	1321
BfaI	CTAG	1 cut(s)	1322
BfmI	CTRYAG	1 cut(s)	294
BfoI	RGCGCY	1 cut(s)	164
BisI	GCNGC	4 cut(s)	660, 685, 1278, 1433
BlsI	GCNGC	4 cut(s)	661, 686, 1279, 1434
Bme1390I	CCNGG	3 cut(s)	210, 285, 760
Bme18I	GGWCC	4 cut(s)	12, 749, 1219, 1560
BmgT120I	GGNCC	4 cut(s)	12, 749, 1219, 1560
BmiI	GGNNCC	7 cut(s)	676, 750, 802, 1006, 1212, 1221, 1341
BmrFI	CCNGG	3 cut(s)	210, 285, 760
BmsI	GCATC	4 cut(s)	319, 671, 1294, 1409
BoxI	GACNNNNGTC	2 cut(s)	987, 1101
BpiI	GAAGAC	1 cut(s)	96
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	3 cut(s)	781, 1044, 1347
Bpu14I	TTCGAA	1 cut(s)	384
BpuEI	CTTGAG	2 cut(s)	164, 967
BsaAI	YACGTR	1 cut(s)	1385
BsaBI	GATNNNNATC	1 cut(s)	1176
BsaJI	CCNNGG	2 cut(s)	8, 401
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 1345, 1375
Bsc4I	CCNNNNNNNGG	3 cut(s)	330, 838, 1067
Bse118I	RCCGGY	1 cut(s)	97
Bse1I	ACTGG	3 cut(s)	706, 1061, 1364
Bse8I	GATNNNNATC	1 cut(s)	1176
BseBI	CCWGG	3 cut(s)	210, 285, 760
BseDI	CCNNGG	2 cut(s)	8, 401
BseGI	GGATG	7 cut(s)	336, 499, 662, 1285, 1378, 1474, 1563
BseJI	GATNNNNATC	1 cut(s)	1176
BseLI	CCNNNNNNNGG	3 cut(s)	330, 838, 1067
BseMII	CTCAG	4 cut(s)	681, 1320, 1440, 1616
BseNI	ACTGG	3 cut(s)	706, 1061, 1364
BseXI	GCAGC	3 cut(s)	646, 671, 1264
BseYI	CCCAGC	1 cut(s)	340
BsgI	GTGCAG	1 cut(s)	670
Bsh1236I	CGCG	1 cut(s)	10
BshFI	GGCC	3 cut(s)	143, 288, 1435
BshNI	GGYRCC	1 cut(s)	800
BsiSI	CCGG	1 cut(s)	98
BslFI	GGGAC	2 cut(s)	995, 1573
BslI	CCNNNNNNNGG	3 cut(s)	330, 838, 1067
BsmAI	GTCTC	3 cut(s)	45, 692, 720
BsmFI	GGGAC	2 cut(s)	995, 1573
BsmI	GAATGC	2 cut(s)	27, 771
BsnI	GGCC	3 cut(s)	143, 288, 1435
Bsp119I	TTCGAA	1 cut(s)	384
Bsp1407I	TGTACA	2 cut(s)	598, 1159
Bsp143I	GATC	9 cut(s)	42, 414, 432, 439, 882, 961, 1210, 1332, 1339
BspACI	CCGC	6 cut(s)	8, 10, 101, 308, 455, 1432
BspANI	GGCC	3 cut(s)	143, 288, 1435
BspCNI	CTCAG	4 cut(s)	680, 1321, 1441, 1615
BspFNI	CGCG	1 cut(s)	10
BspHI	TCATGA	1 cut(s)	1168
BspLI	GGNNCC	7 cut(s)	676, 750, 802, 1006, 1212, 1221, 1341
BspPI	GGATC	6 cut(s)	427, 877, 1205, 1218, 1334, 1347
BspT104I	TTCGAA	1 cut(s)	384
BspT107I	GGYRCC	1 cut(s)	800
BsrFI	RCCGGY	1 cut(s)	97
BsrGI	TGTACA	2 cut(s)	598, 1159
BsrI	ACTGG	3 cut(s)	706, 1061, 1364
BssAI	RCCGGY	1 cut(s)	97
BssECI	CCNNGG	2 cut(s)	8, 401
BssMI	GATC	9 cut(s)	42, 414, 432, 439, 882, 961, 1210, 1332, 1339
BssNAI	GTATAC	1 cut(s)	611
Bst1107I	GTATAC	1 cut(s)	611
Bst2UI	CCWGG	3 cut(s)	210, 285, 760
Bst4CI	ACNGT	5 cut(s)	298, 652, 679, 1103, 1166
Bst6I	CTCTTC	1 cut(s)	120
BstAUI	TGTACA	2 cut(s)	598, 1159
BstBAI	YACGTR	1 cut(s)	1385
BstBI	TTCGAA	1 cut(s)	384
BstC8I	GCNNGC	3 cut(s)	308, 423, 973
BstDEI	CTNAG	4 cut(s)	667, 1329, 1449, 1602
BstDSI	CCRYGG	1 cut(s)	8
BstF5I	GGATG	7 cut(s)	336, 499, 662, 1285, 1378, 1474, 1563
BstFNI	CGCG	1 cut(s)	10
BstH2I	RGCGCY	1 cut(s)	164
BstHHI	GCGC	1 cut(s)	163
BstKTI	GATC	9 cut(s)	45, 417, 435, 442, 885, 964, 1213, 1335, 1342
BstMAI	GTCTC	3 cut(s)	45, 692, 720
BstMBI	GATC	9 cut(s)	42, 414, 432, 439, 882, 961, 1210, 1332, 1339
BstMWI	GCNNNNNNNGC	2 cut(s)	140, 273
BstNI	CCWGG	3 cut(s)	210, 285, 760
BstNSI	RCATGY	1 cut(s)	306
BstPAI	GACNNNNGTC	2 cut(s)	987, 1101
BstSCI	CCNGG	3 cut(s)	208, 283, 758
BstSFI	CTRYAG	1 cut(s)	294
BstUI	CGCG	1 cut(s)	10
BstV1I	GCAGC	3 cut(s)	646, 671, 1264
BstV2I	GAAGAC	1 cut(s)	96
BstX2I	RGATCY	2 cut(s)	1210, 1339
BstXI	CCANNNNNNTGG	1 cut(s)	759
BstYI	RGATCY	2 cut(s)	1210, 1339
BstZ17I	GTATAC	1 cut(s)	611
BsuRI	GGCC	3 cut(s)	143, 288, 1435
BtgI	CCRYGG	1 cut(s)	8
BtsCI	GGATG	7 cut(s)	336, 499, 662, 1285, 1378, 1474, 1563
BtsI	GCAGTG	1 cut(s)	916
BtsIMutI	CAGTG	4 cut(s)	303, 687, 916, 1371
Cac8I	GCNNGC	3 cut(s)	308, 423, 973
CaiI	CAGNNNCTG	2 cut(s)	1067, 1638
CciI	TCATGA	1 cut(s)	1168
CfoI	GCGC	1 cut(s)	163
Cfr10I	RCCGGY	1 cut(s)	97
Cfr13I	GGNCC	4 cut(s)	12, 749, 1219, 1560
Cfr42I	CCGCGG	1 cut(s)	11
Csp6I	GTAC	4 cut(s)	599, 648, 1160, 1311
CviAII	CATG	6 cut(s)	215, 303, 606, 778, 1169, 1336
CviQI	GTAC	4 cut(s)	599, 648, 1160, 1311
DdeI	CTNAG	4 cut(s)	667, 1329, 1449, 1602
DpnI	GATC	9 cut(s)	44, 416, 434, 441, 884, 963, 1212, 1334, 1341
DpnII	GATC	9 cut(s)	42, 414, 432, 439, 882, 961, 1210, 1332, 1339
DraI	TTTAAA	1 cut(s)	229
EaeI	YGGCCR	2 cut(s)	286, 1433
Eam1104I	CTCTTC	1 cut(s)	120
EarI	CTCTTC	1 cut(s)	120
Eco32I	GATATC	2 cut(s)	467, 784
Eco47I	GGWCC	4 cut(s)	12, 749, 1219, 1560
Eco72I	CACGTG	1 cut(s)	1385
EcoO109I	RGGNCCY	1 cut(s)	1219
EcoRI	GAATTC	1 cut(s)	494
EcoRII	CCWGG	3 cut(s)	208, 283, 758
EcoRV	GATATC	2 cut(s)	467, 784
FaeI	CATG	6 cut(s)	218, 306, 609, 781, 1172, 1339
FalI	AAGNNNNNCTT	2 cut(s)	531, 563
FaqI	GGGAC	2 cut(s)	995, 1573
FatI	CATG	6 cut(s)	214, 302, 605, 777, 1168, 1335
FauI	CCCGC	2 cut(s)	15, 315
FauNDI	CATATG	2 cut(s)	427, 977
FbaI	TGATCA	2 cut(s)	439, 961
FblI	GTMKAC	2 cut(s)	475, 610
Fnu4HI	GCNGC	4 cut(s)	660, 685, 1278, 1433
FokI	GGATG	7 cut(s)	323, 486, 649, 1272, 1365, 1481, 1550
Fsp4HI	GCNGC	4 cut(s)	660, 685, 1278, 1433
FspBI	CTAG	1 cut(s)	1322
GlaI	GCGC	1 cut(s)	162
GluI	GCNGC	4 cut(s)	660, 685, 1278, 1433
GsaI	CCCAGC	1 cut(s)	344
GsuI	CTGGAG	3 cut(s)	781, 1044, 1347
HaeII	RGCGCY	1 cut(s)	164
HaeIII	GGCC	3 cut(s)	143, 288, 1435
HapII	CCGG	1 cut(s)	98
HhaI	GCGC	1 cut(s)	163
Hin1II	CATG	6 cut(s)	218, 306, 609, 781, 1172, 1339
Hin6I	GCGC	1 cut(s)	161
HinP1I	GCGC	1 cut(s)	161
HincII	GTYRAC	1 cut(s)	1042
HindII	GTYRAC	1 cut(s)	1042
HinfI	GANTC	9 cut(s)	59, 406, 552, 724, 1118, 1139, 1189, 1229, 1544
HpaI	GTTAAC	1 cut(s)	1042
HpaII	CCGG	1 cut(s)	98
HphI	GGTGA	2 cut(s)	52, 1544
Hpy166II	GTNNAC	6 cut(s)	476, 601, 611, 1042, 1162, 1369
Hpy188III	TCNNGA	6 cut(s)	46, 181, 528, 697, 946, 1169
Hpy8I	GTNNAC	6 cut(s)	476, 601, 611, 1042, 1162, 1369
Hpy99I	CGWCG	1 cut(s)	993
HpyAV	CCTTC	2 cut(s)	574, 950
HpyCH4III	ACNGT	5 cut(s)	298, 652, 679, 1103, 1166
HpyCH4IV	ACGT	2 cut(s)	349, 1384
HpyF10VI	GCNNNNNNNGC	2 cut(s)	140, 273
HpyF3I	CTNAG	4 cut(s)	667, 1329, 1449, 1602
HpySE526I	ACGT	2 cut(s)	349, 1384
Hsp92II	CATG	6 cut(s)	218, 306, 609, 781, 1172, 1339
HspAI	GCGC	1 cut(s)	161
Ksp22I	TGATCA	2 cut(s)	439, 961
KspAI	GTTAAC	1 cut(s)	1042
KspI	CCGCGG	1 cut(s)	11
Kzo9I	GATC	9 cut(s)	42, 414, 432, 439, 882, 961, 1210, 1332, 1339
LmnI	GCTCC	2 cut(s)	233, 1274
Lsp1109I	GCAGC	3 cut(s)	646, 671, 1264
LweI	GCATC	4 cut(s)	319, 671, 1294, 1409
MaeI	CTAG	1 cut(s)	1322
MaeII	ACGT	2 cut(s)	349, 1384
MaeIII	GTNAC	4 cut(s)	298, 481, 1230, 1416
MalI	GATC	9 cut(s)	44, 416, 434, 441, 884, 963, 1212, 1334, 1341
MboI	GATC	9 cut(s)	42, 414, 432, 439, 882, 961, 1210, 1332, 1339
MflI	RGATCY	2 cut(s)	1210, 1339
MlsI	TGGCCA	1 cut(s)	288
MluCI	AATT	5 cut(s)	494, 705, 876, 993, 1077
MluNI	TGGCCA	1 cut(s)	288
MlyI	GAGTC	4 cut(s)	53, 561, 1183, 1238
MmeI	TCCRAC	2 cut(s)	527, 889
MnlI	CCTC	7 cut(s)	133, 411, 420, 676, 842, 1018, 1572
Mox20I	TGGCCA	1 cut(s)	288
MscI	TGGCCA	1 cut(s)	288
MseI	TTAA	5 cut(s)	228, 1041, 1176, 1584, 1626
MslI	CAYNNNNRTG	4 cut(s)	1032, 1167, 1364, 1383
Msp20I	TGGCCA	1 cut(s)	288
MspA1I	CMGCKG	1 cut(s)	10
MspI	CCGG	1 cut(s)	98
MspR9I	CCNGG	3 cut(s)	210, 285, 760
Mva1269I	GAATGC	2 cut(s)	27, 771
MvaI	CCWGG	3 cut(s)	210, 285, 760
MvnI	CGCG	1 cut(s)	10
MwoI	GCNNNNNNNGC	2 cut(s)	140, 273
NdeI	CATATG	2 cut(s)	427, 977
NdeII	GATC	9 cut(s)	42, 414, 432, 439, 882, 961, 1210, 1332, 1339
NlaIII	CATG	6 cut(s)	218, 306, 609, 781, 1172, 1339
NlaIV	GGNNCC	7 cut(s)	676, 750, 802, 1006, 1212, 1221, 1341
NmeAIII	GCCGAG	1 cut(s)	1175
NmuCI	GTSAC	3 cut(s)	298, 1230, 1416
NspI	RCATGY	1 cut(s)	306
NspV	TTCGAA	1 cut(s)	384
OliI	CACNNNNGTG	2 cut(s)	1032, 1364
PagI	TCATGA	1 cut(s)	1168
PctI	GAATGC	2 cut(s)	27, 771
PfeI	GAWTC	5 cut(s)	406, 724, 1118, 1139, 1544
PflMI	CCANNNNNTGG	1 cut(s)	1067
PkrI	GCNGC	4 cut(s)	661, 686, 1279, 1434
PleI	GAGTC	4 cut(s)	53, 560, 1183, 1237
PmaCI	CACGTG	1 cut(s)	1385
PmlI	CACGTG	1 cut(s)	1385
PpsI	GAGTC	4 cut(s)	53, 560, 1183, 1237
Ppu21I	YACGTR	1 cut(s)	1385
PpuMI	RGGWCCY	1 cut(s)	1219
PshAI	GACNNNNGTC	2 cut(s)	987, 1101
Psp5II	RGGWCCY	1 cut(s)	1219
Psp6I	CCWGG	3 cut(s)	208, 283, 758
PspCI	CACGTG	1 cut(s)	1385
PspFI	CCCAGC	1 cut(s)	340
PspGI	CCWGG	3 cut(s)	208, 283, 758
PspN4I	GGNNCC	7 cut(s)	676, 750, 802, 1006, 1212, 1221, 1341
PspPI	GGNCC	4 cut(s)	12, 749, 1219, 1560
PspPPI	RGGWCCY	1 cut(s)	1219
PstNI	CAGNNNCTG	2 cut(s)	1067, 1638
PsuI	RGATCY	2 cut(s)	1210, 1339
RsaI	GTAC	4 cut(s)	600, 649, 1161, 1312
RsaNI	GTAC	4 cut(s)	599, 648, 1160, 1311
RseI	CAYNNNNRTG	4 cut(s)	1032, 1167, 1364, 1383
SacII	CCGCGG	1 cut(s)	11
SaqAI	TTAA	5 cut(s)	228, 1041, 1176, 1584, 1626
SatI	GCNGC	4 cut(s)	660, 685, 1278, 1433
Sau3AI	GATC	9 cut(s)	42, 414, 432, 439, 882, 961, 1210, 1332, 1339
Sau96I	GGNCC	4 cut(s)	12, 749, 1219, 1560
SchI	GAGTC	4 cut(s)	53, 561, 1183, 1238
ScrFI	CCNGG	3 cut(s)	210, 285, 760
SfaNI	GCATC	4 cut(s)	319, 671, 1294, 1409
SfcI	CTRYAG	1 cut(s)	294
Sfr303I	CCGCGG	1 cut(s)	11
SfuI	TTCGAA	1 cut(s)	384
SgrBI	CCGCGG	1 cut(s)	11
SinI	GGWCC	4 cut(s)	12, 749, 1219, 1560
SmiMI	CAYNNNNRTG	4 cut(s)	1032, 1167, 1364, 1383
SmlI	CTYRAG	2 cut(s)	179, 946
SmoI	CTYRAG	2 cut(s)	179, 946
SpeI	ACTAGT	1 cut(s)	1321
Sse9I	AATT	5 cut(s)	494, 705, 876, 993, 1077
SsiI	CCGC	6 cut(s)	8, 10, 101, 308, 455, 1432
SspMI	CTAG	1 cut(s)	1322
StyD4I	CCNGG	3 cut(s)	208, 283, 758
TaaI	ACNGT	5 cut(s)	298, 652, 679, 1103, 1166
TaiI	ACGT	2 cut(s)	352, 1387
TaqI	TCGA	5 cut(s)	45, 313, 384, 696, 991
TasI	AATT	5 cut(s)	494, 705, 876, 993, 1077
TatI	WGTACW	3 cut(s)	598, 1159, 1310
TauI	GCSGC	1 cut(s)	1435
TfiI	GAWTC	5 cut(s)	406, 724, 1118, 1139, 1544
Tru1I	TTAA	5 cut(s)	228, 1041, 1176, 1584, 1626
Tru9I	TTAA	5 cut(s)	228, 1041, 1176, 1584, 1626
TscAI	CASTG	4 cut(s)	303, 694, 923, 1371
TseFI	GTSAC	3 cut(s)	298, 1230, 1416
TseI	GCWGC	3 cut(s)	659, 684, 1277
Tsp45I	GTSAC	3 cut(s)	298, 1230, 1416
TspDTI	ATGAA	7 cut(s)	138, 231, 272, 638, 737, 1288, 1414
TspGWI	ACGGA	1 cut(s)	1534
TspRI	CASTG	4 cut(s)	303, 694, 923, 1371
Van91I	CCANNNNNTGG	1 cut(s)	1067
VpaK11BI	GGWCC	4 cut(s)	12, 749, 1219, 1560
XapI	RAATTY	2 cut(s)	494, 1077
XceI	RCATGY	1 cut(s)	306
XmiI	GTMKAC	2 cut(s)	475, 610
XspI	CTAG	1 cut(s)	1322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.