Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006143

Physical Location & Seq

Genomic Coordinates Forward (+)

75249309 .. 75254717

Gene Structure 5409 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG472900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGCCCCCGCGGACCAGAAGAATGCCATTTCCGAATGTGGTGATCGAGAGAGACACCGACTCCGAGCAAAGCTCGTCGGAAGAAGAAGAAGAAGAAGAACAAGAAGACGAACCGGCGGTGTTGGAGGAGAGCGAAAATGAAGAGAAAGCTGACGAGGCCAAGAAGAAAGGGAAAGCGCCCATTACTATTTCTCTCAAGAAAGTTTGCAAGGTTTGTAAGAAGCCTGGACATGAAGCTGGATTTAAAGGAGCTACTTATATTGATTGCCCAATGAAACCTTGCTTTCTTTGCAAAATGCCTGGCCATACTACAGTGACATGCCCGCATCGAGTAGCTACCGAGTATGGGGTCACCCCAGCAAAACGTAAAAATACCCGAAATGCATTGGAATATGCGTTCGAACGACAGATTAGACCTCGGATTTCTCCGATCAAGCCAGCATATGTGATCCCTGATCAAGTAAGTTGTGCGGTTATCAGATATCATAGTAGACGGGTAACTTGCTTGGAATTCCATCCAACAAACAATAATATCCTTTTATCAGGAGATAAGAAAGGACAGCTTGGAGTCTGGGATTTTCGCAAAGTATATGAGAAGGTTGTTTATGGAAATGTACACTCATGTATACTAAACAATATGAAGTTTAGCCCTGCAAGTGATGGTACAGTATATGCTGCATCCTCAGATGGAACTGTTAGTTGCACTGATGTCGAGACTGGAATTGCATTGTCTCTGATGAATCTCAACCCTGATGGTTGGCAGGGTCCAAGCACCTGGAGAATGCTGTATGGCATGGATATCAATGCAGAGAAAGGTGCCGTGCTTGTTGCTGATAACTTTGGTTTCTTCTACTTGGTTGATACTCGCTCAAATAACAGAACAGGGAAACCAATTTTGATCCATAAGAAAGGTAGCAAAGTTGTTGGACTTCACTGCAATCCTGTTCAACCAGACCTTCTCTTGAGTTGTGGAAATGATCATTTTGCTCGCATATGGGACATTCGTCGAATTGAAGATGGTTCCTCCATTTATGACCTTGCACACAGCCGTGTTGTTAACTCTGCGTATTTTTCTCCAGTATCTGGCAGTAAAATTCTTACCACTTCACAGGACAACCGTCTTTGTATATGGGATTCCATATTTGGCAATATGGATTCCCCAAGCCGAGAGATTGTACACAGTCATGATTTTAATCGGTATCTGACTCCTTTCCGAGCCGAATGGGATCCAAAGGACCCGTCAGAGTCACTTGCAGTTATTGGTCGTTATATTAGTGAAAACTATAATGGAGCTGCTCTGCATCCCATTGATTTCATAGACATCAGTACAGGGCAACTAGTTGCTGAGATCATGGATCCAAACATTACTACAATCACTCCAGTGAACAAGCTACATCCACGTGATGATGTTTTGGCATCTGGTAGTTCAAGGTCACTTTTCATTTGGCGGCCAAAGGAAAAGTGTGAGCCTGTGGAACAGATGGATGTAGGGAAGATTTTTGTTTGCGACAGAGATGATAAAAAGAGAAGAAAACGGAAGTTTGGGGGTGAAAGTGATGATTCTGATGATGACAAGTCCATCCCCAAGGGCAAGAGGTTTAAGTCCCAAAAGAAATCTCAGTCCAAGTCAAGTCTATCTGTTAAGGTCAGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0031461 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04115 ko04120 ko05161 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03420 map04115 map04120 map05161 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

WD40

Protein Analysis

551

Amino Acids

61.99

Weight (kDa)

8.36

Isoelectric Point (pI)

49.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	159 - 242	1.4e-06	THOC3 beta-propeller domain
Beta-prop_EIPR1	PF23609	162 - 232	8.4e-06	EIPR1 beta-propeller
WD40_CDC20-Fz	PF24807	213 - 382	6.3e-08	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	274 - 377	2.2e-06	EIPR1 beta-propeller
Beta-prop_THOC3	PF25174	306 - 378	2.8e-06	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	316 - 380	9.9e-06	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0006143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58760 AT5G58760
fragaria_vesca	FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500
malus_domestica	MD11G1075200.v1.1
prunus_persica	Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1
pyrus_communis	pycom03g05740 pycom11g06250
rosa_chinensis	RchiOBHm_Chr5g0069361
rosa_laevigata	RLG00000036049
rosa_multiflora	Rmu_sc0002658.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011560
rosa_rugosa	Rorug05G0397300
rosa_samantha	Rh5AG453900 Rh5BG472900 Rh5CG495500 Rh5DG485300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	815
AccB7I	CCANNNNNTGG	1 cut(s)	1082
AccI	GTMKAC	2 cut(s)	490, 625
AccII	CGCG	1 cut(s)	10
AciI	CCGC	6 cut(s)	8, 10, 116, 323, 470, 1447
AclWI	GGATC	6 cut(s)	442, 892, 1220, 1233, 1349, 1362
AcoI	YGGCCR	2 cut(s)	301, 1448
AcsI	RAATTY	2 cut(s)	509, 1092
AcvI	CACGTG	1 cut(s)	1400
AfaI	GTAC	4 cut(s)	615, 664, 1176, 1327
AfiI	CCNNNNNNNGG	2 cut(s)	345, 1082
AgsI	TTSAA	3 cut(s)	947, 1013, 1428
AhlI	ACTAGT	1 cut(s)	1336
AjnI	CCWGG	3 cut(s)	223, 298, 773
AleI	CACNNNNGTG	2 cut(s)	1047, 1379
AloI	GAACNNNNNNTCC	2 cut(s)	380, 412
AluBI	AGCT	8 cut(s)	72, 149, 236, 251, 335, 562, 1292, 1390
AluI	AGCT	8 cut(s)	72, 149, 236, 251, 335, 562, 1292, 1390
Alw26I	GTCTC	3 cut(s)	45, 707, 735
AlwI	GGATC	6 cut(s)	442, 892, 1220, 1233, 1349, 1362
AlwNI	CAGNNNCTG	2 cut(s)	1082, 1653
AoxI	GGCC	3 cut(s)	156, 301, 1448
ApeKI	GCWGC	2 cut(s)	674, 1292
ApoI	RAATTY	2 cut(s)	509, 1092
ArsI	GACNNNNNNTTYG	2 cut(s)	1223, 1255
AspLEI	GCGC	1 cut(s)	178
AspS9I	GGNCC	3 cut(s)	12, 764, 1234
AsuHPI	GGTGA	3 cut(s)	52, 343, 1559
AsuII	TTCGAA	1 cut(s)	399
AvaII	GGWCC	3 cut(s)	12, 764, 1234
BalI	TGGCCA	1 cut(s)	303
BamHI	GGATCC	2 cut(s)	1225, 1354
BanI	GGYRCC	1 cut(s)	815
BbrPI	CACGTG	1 cut(s)	1400
BbsI	GAAGAC	1 cut(s)	111
BbvI	GCAGC	2 cut(s)	661, 1279
BccI	CCATC	7 cut(s)	522, 653, 680, 746, 1010, 1474, 1586
BceAI	ACGGC	2 cut(s)	803, 1032
BcgI	CGANNNNNNTGC	2 cut(s)	691, 725
BciT130I	CCWGG	3 cut(s)	225, 300, 775
BclI	TGATCA	2 cut(s)	454, 976
BcoDI	GTCTC	3 cut(s)	45, 707, 735
BcuI	ACTAGT	1 cut(s)	1336
BfaI	CTAG	1 cut(s)	1337
BfmI	CTRYAG	1 cut(s)	309
BfoI	RGCGCY	1 cut(s)	179
BisI	GCNGC	3 cut(s)	675, 1293, 1448
BlsI	GCNGC	3 cut(s)	676, 1294, 1449
Bme1390I	CCNGG	3 cut(s)	225, 300, 775
Bme18I	GGWCC	3 cut(s)	12, 764, 1234
BmgT120I	GGNCC	3 cut(s)	12, 764, 1234
BmiI	GGNNCC	6 cut(s)	765, 817, 1021, 1227, 1236, 1356
BmrFI	CCNGG	3 cut(s)	225, 300, 775
BmsI	GCATC	4 cut(s)	334, 686, 1309, 1424
BoxI	GACNNNNGTC	2 cut(s)	1002, 1116
BpiI	GAAGAC	1 cut(s)	111
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	3 cut(s)	796, 1059, 1362
Bpu14I	TTCGAA	1 cut(s)	399
BpuEI	CTTGAG	2 cut(s)	179, 982
BsaAI	YACGTR	1 cut(s)	1400
BsaBI	GATNNNNATC	1 cut(s)	1191
BsaJI	CCNNGG	3 cut(s)	8, 416, 1584
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 1360, 1390
Bsc4I	CCNNNNNNNGG	2 cut(s)	345, 1082
Bse118I	RCCGGY	1 cut(s)	112
Bse1I	ACTGG	3 cut(s)	721, 1076, 1379
Bse8I	GATNNNNATC	1 cut(s)	1191
BseBI	CCWGG	3 cut(s)	225, 300, 775
BseDI	CCNNGG	3 cut(s)	8, 416, 1584
BseGI	GGATG	6 cut(s)	514, 677, 1300, 1393, 1489, 1578
BseJI	GATNNNNATC	1 cut(s)	1191
BseLI	CCNNNNNNNGG	2 cut(s)	345, 1082
BseMII	CTCAG	3 cut(s)	696, 1335, 1631
BseNI	ACTGG	3 cut(s)	721, 1076, 1379
BseRI	GAGGAG	1 cut(s)	140
BseXI	GCAGC	2 cut(s)	661, 1279
BseYI	CCCAGC	1 cut(s)	355
Bsh1236I	CGCG	1 cut(s)	10
BshFI	GGCC	3 cut(s)	158, 303, 1450
BshNI	GGYRCC	1 cut(s)	815
BsiSI	CCGG	1 cut(s)	113
BslFI	GGGAC	2 cut(s)	1010, 1588
BslI	CCNNNNNNNGG	2 cut(s)	345, 1082
BsmAI	GTCTC	3 cut(s)	45, 707, 735
BsmFI	GGGAC	2 cut(s)	1010, 1588
BsmI	GAATGC	2 cut(s)	27, 786
BsnI	GGCC	3 cut(s)	158, 303, 1450
Bsp119I	TTCGAA	1 cut(s)	399
Bsp1407I	TGTACA	2 cut(s)	613, 1174
Bsp143I	GATC	9 cut(s)	42, 429, 447, 454, 897, 976, 1225, 1347, 1354
BspACI	CCGC	6 cut(s)	8, 10, 116, 323, 470, 1447
BspANI	GGCC	3 cut(s)	158, 303, 1450
BspCNI	CTCAG	3 cut(s)	695, 1336, 1630
BspFNI	CGCG	1 cut(s)	10
BspHI	TCATGA	1 cut(s)	1183
BspLI	GGNNCC	6 cut(s)	765, 817, 1021, 1227, 1236, 1356
BspPI	GGATC	6 cut(s)	442, 892, 1220, 1233, 1349, 1362
BspT104I	TTCGAA	1 cut(s)	399
BspT107I	GGYRCC	1 cut(s)	815
BsrFI	RCCGGY	1 cut(s)	112
BsrGI	TGTACA	2 cut(s)	613, 1174
BsrI	ACTGG	3 cut(s)	721, 1076, 1379
BssAI	RCCGGY	1 cut(s)	112
BssECI	CCNNGG	3 cut(s)	8, 416, 1584
BssMI	GATC	9 cut(s)	42, 429, 447, 454, 897, 976, 1225, 1347, 1354
BssNAI	GTATAC	1 cut(s)	626
BssT1I	CCWWGG	1 cut(s)	1584
Bst1107I	GTATAC	1 cut(s)	626
Bst2UI	CCWGG	3 cut(s)	225, 300, 775
Bst4CI	ACNGT	5 cut(s)	313, 667, 694, 1118, 1181
Bst6I	CTCTTC	1 cut(s)	135
BstAUI	TGTACA	2 cut(s)	613, 1174
BstBAI	YACGTR	1 cut(s)	1400
BstBI	TTCGAA	1 cut(s)	399
BstC8I	GCNNGC	3 cut(s)	323, 438, 988
BstDEI	CTNAG	3 cut(s)	682, 1344, 1617
BstDSI	CCRYGG	1 cut(s)	8
BstEII	GGTNACC	1 cut(s)	349
BstF5I	GGATG	6 cut(s)	514, 677, 1300, 1393, 1489, 1578
BstFNI	CGCG	1 cut(s)	10
BstH2I	RGCGCY	1 cut(s)	179
BstHHI	GCGC	1 cut(s)	178
BstKTI	GATC	9 cut(s)	45, 432, 450, 457, 900, 979, 1228, 1350, 1357
BstMAI	GTCTC	3 cut(s)	45, 707, 735
BstMBI	GATC	9 cut(s)	42, 429, 447, 454, 897, 976, 1225, 1347, 1354
BstMWI	GCNNNNNNNGC	2 cut(s)	155, 288
BstNI	CCWGG	3 cut(s)	225, 300, 775
BstNSI	RCATGY	1 cut(s)	321
BstPAI	GACNNNNGTC	2 cut(s)	1002, 1116
BstPI	GGTNACC	1 cut(s)	349
BstSCI	CCNGG	3 cut(s)	223, 298, 773
BstSFI	CTRYAG	1 cut(s)	309
BstUI	CGCG	1 cut(s)	10
BstV1I	GCAGC	2 cut(s)	661, 1279
BstV2I	GAAGAC	1 cut(s)	111
BstX2I	RGATCY	2 cut(s)	1225, 1354
BstXI	CCANNNNNNTGG	1 cut(s)	774
BstYI	RGATCY	2 cut(s)	1225, 1354
BstZ17I	GTATAC	1 cut(s)	626
BsuRI	GGCC	3 cut(s)	158, 303, 1450
BtgI	CCRYGG	1 cut(s)	8
BtsCI	GGATG	6 cut(s)	514, 677, 1300, 1393, 1489, 1578
BtsI	GCAGTG	1 cut(s)	931
BtsIMutI	CAGTG	4 cut(s)	318, 702, 931, 1386
Cac8I	GCNNGC	3 cut(s)	323, 438, 988
CaiI	CAGNNNCTG	2 cut(s)	1082, 1653
CciI	TCATGA	1 cut(s)	1183
CfoI	GCGC	1 cut(s)	178
Cfr10I	RCCGGY	1 cut(s)	112
Cfr13I	GGNCC	3 cut(s)	12, 764, 1234
Cfr42I	CCGCGG	1 cut(s)	11
Csp6I	GTAC	4 cut(s)	614, 663, 1175, 1326
CviAII	CATG	6 cut(s)	230, 318, 621, 793, 1184, 1351
CviQI	GTAC	4 cut(s)	614, 663, 1175, 1326
DdeI	CTNAG	3 cut(s)	682, 1344, 1617
DpnI	GATC	9 cut(s)	44, 431, 449, 456, 899, 978, 1227, 1349, 1356
DpnII	GATC	9 cut(s)	42, 429, 447, 454, 897, 976, 1225, 1347, 1354
DraI	TTTAAA	1 cut(s)	244
EaeI	YGGCCR	2 cut(s)	301, 1448
Eam1104I	CTCTTC	1 cut(s)	135
EarI	CTCTTC	1 cut(s)	135
Eco130I	CCWWGG	1 cut(s)	1584
Eco32I	GATATC	2 cut(s)	482, 799
Eco47I	GGWCC	3 cut(s)	12, 764, 1234
Eco72I	CACGTG	1 cut(s)	1400
Eco91I	GGTNACC	1 cut(s)	349
EcoO109I	RGGNCCY	1 cut(s)	1234
EcoO65I	GGTNACC	1 cut(s)	349
EcoRI	GAATTC	1 cut(s)	509
EcoRII	CCWGG	3 cut(s)	223, 298, 773
EcoRV	GATATC	2 cut(s)	482, 799
EcoT14I	CCWWGG	1 cut(s)	1584
EcoT22I	ATGCAT	1 cut(s)	385
ErhI	CCWWGG	1 cut(s)	1584
FaeI	CATG	6 cut(s)	233, 321, 624, 796, 1187, 1354
FalI	AAGNNNNNCTT	2 cut(s)	546, 578
FaqI	GGGAC	2 cut(s)	1010, 1588
FatI	CATG	6 cut(s)	229, 317, 620, 792, 1183, 1350
FauI	CCCGC	2 cut(s)	15, 330
FauNDI	CATATG	2 cut(s)	442, 992
FbaI	TGATCA	2 cut(s)	454, 976
FblI	GTMKAC	2 cut(s)	490, 625
Fnu4HI	GCNGC	3 cut(s)	675, 1293, 1448
FokI	GGATG	6 cut(s)	501, 664, 1287, 1380, 1496, 1565
Fsp4HI	GCNGC	3 cut(s)	675, 1293, 1448
FspBI	CTAG	1 cut(s)	1337
GlaI	GCGC	1 cut(s)	177
GluI	GCNGC	3 cut(s)	675, 1293, 1448
GsaI	CCCAGC	1 cut(s)	359
GsuI	CTGGAG	3 cut(s)	796, 1059, 1362
HaeII	RGCGCY	1 cut(s)	179
HaeIII	GGCC	3 cut(s)	158, 303, 1450
HapII	CCGG	1 cut(s)	113
HhaI	GCGC	1 cut(s)	178
Hin1II	CATG	6 cut(s)	233, 321, 624, 796, 1187, 1354
Hin6I	GCGC	1 cut(s)	176
HinP1I	GCGC	1 cut(s)	176
HincII	GTYRAC	1 cut(s)	1057
HindII	GTYRAC	1 cut(s)	1057
HinfI	GANTC	8 cut(s)	59, 567, 739, 1133, 1154, 1204, 1244, 1559
HpaI	GTTAAC	1 cut(s)	1057
HpaII	CCGG	1 cut(s)	113
HphI	GGTGA	3 cut(s)	52, 343, 1559
Hpy166II	GTNNAC	6 cut(s)	491, 616, 626, 1057, 1177, 1384
Hpy188III	TCNNGA	6 cut(s)	46, 196, 543, 712, 961, 1184
Hpy8I	GTNNAC	6 cut(s)	491, 616, 626, 1057, 1177, 1384
Hpy99I	CGWCG	2 cut(s)	79, 1008
HpyAV	CCTTC	2 cut(s)	589, 965
HpyCH4III	ACNGT	5 cut(s)	313, 667, 694, 1118, 1181
HpyCH4IV	ACGT	2 cut(s)	364, 1399
HpyF10VI	GCNNNNNNNGC	2 cut(s)	155, 288
HpyF3I	CTNAG	3 cut(s)	682, 1344, 1617
HpySE526I	ACGT	2 cut(s)	364, 1399
Hsp92II	CATG	6 cut(s)	233, 321, 624, 796, 1187, 1354
HspAI	GCGC	1 cut(s)	176
Ksp22I	TGATCA	2 cut(s)	454, 976
KspAI	GTTAAC	1 cut(s)	1057
KspI	CCGCGG	1 cut(s)	11
Kzo9I	GATC	9 cut(s)	42, 429, 447, 454, 897, 976, 1225, 1347, 1354
LmnI	GCTCC	2 cut(s)	248, 1289
Lsp1109I	GCAGC	2 cut(s)	661, 1279
LweI	GCATC	4 cut(s)	334, 686, 1309, 1424
MaeI	CTAG	1 cut(s)	1337
MaeII	ACGT	2 cut(s)	364, 1399
MaeIII	GTNAC	5 cut(s)	313, 349, 496, 1245, 1431
MalI	GATC	9 cut(s)	44, 431, 449, 456, 899, 978, 1227, 1349, 1356
MboI	GATC	9 cut(s)	42, 429, 447, 454, 897, 976, 1225, 1347, 1354
MflI	RGATCY	2 cut(s)	1225, 1354
MlsI	TGGCCA	1 cut(s)	303
MluCI	AATT	5 cut(s)	509, 720, 891, 1008, 1092
MluNI	TGGCCA	1 cut(s)	303
MlyI	GAGTC	4 cut(s)	53, 576, 1198, 1253
MmeI	TCCRAC	4 cut(s)	57, 102, 542, 904
MnlI	CCTC	6 cut(s)	118, 148, 426, 691, 1033, 1587
Mox20I	TGGCCA	1 cut(s)	303
Mph1103I	ATGCAT	1 cut(s)	385
MscI	TGGCCA	1 cut(s)	303
MseI	TTAA	5 cut(s)	243, 1056, 1191, 1599, 1641
MslI	CAYNNNNRTG	4 cut(s)	1047, 1182, 1379, 1398
Msp20I	TGGCCA	1 cut(s)	303
MspA1I	CMGCKG	1 cut(s)	10
MspI	CCGG	1 cut(s)	113
MspR9I	CCNGG	3 cut(s)	225, 300, 775
Mva1269I	GAATGC	2 cut(s)	27, 786
MvaI	CCWGG	3 cut(s)	225, 300, 775
MvnI	CGCG	1 cut(s)	10
MwoI	GCNNNNNNNGC	2 cut(s)	155, 288
NdeI	CATATG	2 cut(s)	442, 992
NdeII	GATC	9 cut(s)	42, 429, 447, 454, 897, 976, 1225, 1347, 1354
NlaIII	CATG	6 cut(s)	233, 321, 624, 796, 1187, 1354
NlaIV	GGNNCC	6 cut(s)	765, 817, 1021, 1227, 1236, 1356
NmeAIII	GCCGAG	1 cut(s)	1190
NmuCI	GTSAC	4 cut(s)	313, 349, 1245, 1431
NsiI	ATGCAT	1 cut(s)	385
NspI	RCATGY	1 cut(s)	321
NspV	TTCGAA	1 cut(s)	399
OliI	CACNNNNGTG	2 cut(s)	1047, 1379
PagI	TCATGA	1 cut(s)	1183
PctI	GAATGC	2 cut(s)	27, 786
PfeI	GAWTC	4 cut(s)	739, 1133, 1154, 1559
PflMI	CCANNNNNTGG	1 cut(s)	1082
PkrI	GCNGC	3 cut(s)	676, 1294, 1449
PleI	GAGTC	4 cut(s)	53, 575, 1198, 1252
PmaCI	CACGTG	1 cut(s)	1400
PmlI	CACGTG	1 cut(s)	1400
PpsI	GAGTC	4 cut(s)	53, 575, 1198, 1252
Ppu21I	YACGTR	1 cut(s)	1400
PpuMI	RGGWCCY	1 cut(s)	1234
PshAI	GACNNNNGTC	2 cut(s)	1002, 1116
Psp5II	RGGWCCY	1 cut(s)	1234
Psp6I	CCWGG	3 cut(s)	223, 298, 773
PspCI	CACGTG	1 cut(s)	1400
PspEI	GGTNACC	1 cut(s)	349
PspFI	CCCAGC	1 cut(s)	355
PspGI	CCWGG	3 cut(s)	223, 298, 773
PspN4I	GGNNCC	6 cut(s)	765, 817, 1021, 1227, 1236, 1356
PspPI	GGNCC	3 cut(s)	12, 764, 1234
PspPPI	RGGWCCY	1 cut(s)	1234
PstNI	CAGNNNCTG	2 cut(s)	1082, 1653
PsuI	RGATCY	2 cut(s)	1225, 1354
RsaI	GTAC	4 cut(s)	615, 664, 1176, 1327
RsaNI	GTAC	4 cut(s)	614, 663, 1175, 1326
RseI	CAYNNNNRTG	4 cut(s)	1047, 1182, 1379, 1398
SacII	CCGCGG	1 cut(s)	11
SaqAI	TTAA	5 cut(s)	243, 1056, 1191, 1599, 1641
SatI	GCNGC	3 cut(s)	675, 1293, 1448
Sau3AI	GATC	9 cut(s)	42, 429, 447, 454, 897, 976, 1225, 1347, 1354
Sau96I	GGNCC	3 cut(s)	12, 764, 1234
SchI	GAGTC	4 cut(s)	53, 576, 1198, 1253
ScrFI	CCNGG	3 cut(s)	225, 300, 775
SfaNI	GCATC	4 cut(s)	334, 686, 1309, 1424
SfcI	CTRYAG	1 cut(s)	309
Sfr303I	CCGCGG	1 cut(s)	11
SfuI	TTCGAA	1 cut(s)	399
SgrBI	CCGCGG	1 cut(s)	11
SinI	GGWCC	3 cut(s)	12, 764, 1234
SmiMI	CAYNNNNRTG	4 cut(s)	1047, 1182, 1379, 1398
SmlI	CTYRAG	2 cut(s)	194, 961
SmoI	CTYRAG	2 cut(s)	194, 961
SpeI	ACTAGT	1 cut(s)	1336
Sse9I	AATT	5 cut(s)	509, 720, 891, 1008, 1092
SsiI	CCGC	6 cut(s)	8, 10, 116, 323, 470, 1447
SspMI	CTAG	1 cut(s)	1337
StyD4I	CCNGG	3 cut(s)	223, 298, 773
StyI	CCWWGG	1 cut(s)	1584
TaaI	ACNGT	5 cut(s)	313, 667, 694, 1118, 1181
TaiI	ACGT	2 cut(s)	367, 1402
TaqI	TCGA	5 cut(s)	45, 328, 399, 711, 1006
TasI	AATT	5 cut(s)	509, 720, 891, 1008, 1092
TatI	WGTACW	3 cut(s)	613, 1174, 1325
TauI	GCSGC	1 cut(s)	1450
TfiI	GAWTC	4 cut(s)	739, 1133, 1154, 1559
Tru1I	TTAA	5 cut(s)	243, 1056, 1191, 1599, 1641
Tru9I	TTAA	5 cut(s)	243, 1056, 1191, 1599, 1641
TscAI	CASTG	4 cut(s)	318, 709, 938, 1386
TseFI	GTSAC	4 cut(s)	313, 349, 1245, 1431
TseI	GCWGC	2 cut(s)	674, 1292
Tsp45I	GTSAC	4 cut(s)	313, 349, 1245, 1431
TspDTI	ATGAA	7 cut(s)	153, 246, 287, 653, 752, 1303, 1429
TspGWI	ACGGA	1 cut(s)	1549
TspRI	CASTG	4 cut(s)	318, 709, 938, 1386
Van91I	CCANNNNNTGG	1 cut(s)	1082
VpaK11BI	GGWCC	3 cut(s)	12, 764, 1234
XapI	RAATTY	2 cut(s)	509, 1092
XceI	RCATGY	1 cut(s)	321
XmiI	GTMKAC	2 cut(s)	490, 625
XspI	CTAG	1 cut(s)	1337
Zsp2I	ATGCAT	1 cut(s)	385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.