Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0006143

Physical Location & Seq

Genomic Coordinates Reverse (-)

6368387 .. 6372532

Gene Structure 4146 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1075200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGTCCCCGCAAACCAGAAGAATGACGTTCCCGAAGGTCGTCATTGAGAGAGACTCAGACTCTGAGCAGAGCTCATCTGAAGATGACGAAGAACAAGAGGAAGAGGAAGTGTTGGAGAGCGAAAACGAAGCCAAAGTCGAGGAGGTTTTGGACGAGAAGAAGAAAGGGAAAGCACCCATTACTATCAGCCTCAAGAAAGTCTGCAAAGTGTGCAAGAAGCCGGGGCATGAAGCTGGGTTCAAAGGGGCTACTTACATTGATTGCCCAATGAAGCCCTGCTTTCTTTGTAAAATGCCTGGCCACACTACAGTGGCATGCCCACACCGAGTGGCTACTGAGCATGGGGTTGTCCCAGCACCCCATAAAAATACCCGTAACGCGCTGGAGTATATGTTCGAACGCCAGATTAGACCTCGTGTTGCTCCGATCAAGACAGCACATGTGATCCCAGATCAAGTAAGTTGTGCGGTTATCAGGTATCACAGTAGACGGGTGACTAGCTTAGAGTTCCATCCAACGAAGAATAACATCCTTTTATCTGGAGATAAGAAAGGACAACTTGGAGTATGGGATTTTGTCAAAGTACATGAAAAGATTGTTTATGGAAATGTACACTCTTGTATACTCAACAACATGAAGTTTAAACCTGCAAGTGATGATACAGTATATGGTGCATCCTCAGATGGAACTATTAGTTGCACTGATTTGGAGACTGGAATTTCATTATCTCTGATGAACCTTAACCCTGATGGATGGCAGGGGCCAAACAGCTGGAGAATGCTTTATGGAATGGATATCAATGCAGAAAAAGGTGTTGTGCTTGTTGCTGACAACTTTGGCTTTCTGTACATGGTTGATTCTCGCTCCAATGACAAAACTGGGAAGCCAATTTTGATCCATAAGAAAGGTAGCAAAGTAGTTGGACTCCACTGCAATCCATTGCTGCCTGACCTTCTACTGAGTTGTGGAAATGATCACTTTGCTCGTATATGGGACATTCGTCGAATTGAAGCTGGTTCTTCCATATACGACCTTGCACACAGCCGTGTTGTTAACTCTGCATATTTTTCTCCGATGTCTGGCAGCAAAATTCTTAGCACTTCACAGGATAACCGTATTCGTATATGGGACTCTATATTTGGCAATATGGATACCCCAAGCCGAGAGATTGTACACAGTCATGATTTCAATCGTCATCTGACTCCTTTCAAAGCTGAATGGGATCCAAAGGACTCGGCAGAGTCCCTTGCAGTTATTGGTCGTTACATAAGTGAAAACTATAACGGAGCTGCCCTGCATCCCATTGATTTCATAGACATAACCACAGGACAACTAGTTGCTGAGGTCATGGATCCAAACATCACTACAATCAGTCCAGTGAACAAGCTACATCCACGTGATGATGTTTTGGCATCGGGCAGTTCAAGGTCACTTTTCATTTGGCGGCCGAAGGAAAAGTGCGAGCCTGTGGAACTGAAGGATGAAGGGAAGATTATTGTCTGTTCCGGAGCTGAGAAGAAGAGGAACCGGAAGTTTGGGGATGAAAACGATGATTCTGATGATGACAAGTTCCCCCCTAAGGGCAAGAATTTAAAGTCCAAAAAATCTGCCTCAAAATCAAGTCAATATACTCTCAAGGTCAAACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0031461 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04115 ko04120 ko05161 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03420 map04115 map04120 map05161 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

WD40

Protein Analysis

550

Amino Acids

61.47

Weight (kDa)

7.88

Isoelectric Point (pI)

42.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	271 - 381	1e-06	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	272 - 376	1.8e-06	EIPR1 beta-propeller
Beta-prop_WDR5	PF25175	317 - 381	1.2e-07	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	318 - 378	2.8e-07	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58760 AT5G58760
fragaria_vesca	FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500
malus_domestica	MD11G1075200.v1.1
prunus_persica	Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1
pyrus_communis	pycom03g05740 pycom11g06250
rosa_chinensis	RchiOBHm_Chr5g0069361
rosa_laevigata	RLG00000036049
rosa_multiflora	Rmu_sc0002658.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011560
rosa_rugosa	Rorug05G0397300
rosa_samantha	Rh5AG453900 Rh5BG472900 Rh5CG495500 Rh5DG485300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	655
AccI	GTMKAC	2 cut(s)	487, 622
AccII	CGCG	1 cut(s)	380
AccIII	TCCGGA	1 cut(s)	1505
AciI	CCGC	3 cut(s)	8, 467, 1444
AclWI	GGATC	6 cut(s)	439, 889, 1217, 1230, 1346, 1359
AcoI	YGGCCR	2 cut(s)	298, 1445
AcsI	RAATTY	3 cut(s)	717, 1089, 1588
AcuI	CTGAAG	2 cut(s)	99, 1496
AcvI	CACGTG	1 cut(s)	1397
AdeI	CACNNNGTG	1 cut(s)	328
AfaI	GTAC	4 cut(s)	585, 612, 848, 1173
AfiI	CCNNNNNNNGG	3 cut(s)	1079, 1579, 1580
AflIII	ACRYGT	1 cut(s)	439
AgsI	TTSAA	5 cut(s)	241, 1010, 1189, 1210, 1425
AhlI	ACTAGT	1 cut(s)	1333
AjnI	CCWGG	1 cut(s)	295
AleI	CACNNNNGTG	2 cut(s)	308, 1044
AloI	GAACNNNNNNTCC	2 cut(s)	377, 409
AluBI	AGCT	9 cut(s)	72, 233, 501, 771, 1013, 1214, 1289, 1387, 1511
AluI	AGCT	9 cut(s)	72, 233, 501, 771, 1013, 1214, 1289, 1387, 1511
Alw21I	GWGCWC	1 cut(s)	74
Alw26I	GTCTC	2 cut(s)	45, 704
AlwI	GGATC	6 cut(s)	439, 889, 1217, 1230, 1346, 1359
AlwNI	CAGNNNCTG	1 cut(s)	62
Aor13HI	TCCGGA	1 cut(s)	1505
AoxI	GGCC	3 cut(s)	298, 761, 1445
ApeKI	GCWGC	3 cut(s)	943, 1083, 1289
ApoI	RAATTY	3 cut(s)	717, 1089, 1588
ArsI	GACNNNNNNTTYG	4 cut(s)	120, 152, 1121, 1153
AspLEI	GCGC	1 cut(s)	382
AspS9I	GGNCC	1 cut(s)	761
AsuC2I	CCSGG	1 cut(s)	222
AsuHPI	GGTGA	1 cut(s)	505
AsuII	TTCGAA	1 cut(s)	396
AxyI	CCTNAGG	1 cut(s)	1578
BalI	TGGCCA	1 cut(s)	300
BamHI	GGATCC	2 cut(s)	1222, 1351
BanII	GRGCYC	1 cut(s)	74
BauI	CACGAG	1 cut(s)	414
BbrPI	CACGTG	1 cut(s)	1397
Bbv12I	GWGCWC	1 cut(s)	74
BbvCI	CCTCAGC	1 cut(s)	1341
BbvI	GCAGC	3 cut(s)	930, 1095, 1276
BccI	CCATC	4 cut(s)	519, 677, 743, 747
BceAI	ACGGC	1 cut(s)	1029
BciT130I	CCWGG	1 cut(s)	297
BciVI	GTATCC	1 cut(s)	1144
BclI	TGATCA	1 cut(s)	973
BcnI	CCSGG	1 cut(s)	222
BcoDI	GTCTC	2 cut(s)	45, 704
BcuI	ACTAGT	1 cut(s)	1333
BfaI	CTAG	2 cut(s)	498, 1334
BfmI	CTRYAG	1 cut(s)	306
BfuAI	ACCTGC	1 cut(s)	655
BfuI	GTATCC	1 cut(s)	1144
BisI	GCNGC	4 cut(s)	944, 1084, 1290, 1445
BlsI	GCNGC	4 cut(s)	945, 1085, 1291, 1446
Bme1390I	CCNGG	2 cut(s)	222, 297
BmgT120I	GGNCC	1 cut(s)	761
BmiI	GGNNCC	4 cut(s)	762, 1224, 1353, 1526
BmrFI	CCNGG	2 cut(s)	222, 297
BmrI	ACTGGG	1 cut(s)	888
BmsI	GCATC	3 cut(s)	683, 1306, 1421
BmuI	ACTGGG	1 cut(s)	888
BoxI	GACNNNNGTC	1 cut(s)	999
BplI	GAGNNNNNCTC	4 cut(s)	38, 70, 56, 88
BpmI	CTGGAG	3 cut(s)	404, 561, 793
Bpu10I	CCTNAGC	1 cut(s)	1341
Bpu14I	TTCGAA	1 cut(s)	396
BpuEI	CTTGAG	2 cut(s)	176, 1619
BpuMI	CCSGG	1 cut(s)	222
BsaAI	YACGTR	1 cut(s)	1397
BsaBI	GATNNNNATC	1 cut(s)	1188
BsaJI	CCNNGG	1 cut(s)	221
BsaWI	WCCGGW	2 cut(s)	1505, 1527
BsaXI	ACNNNNNCTCC	2 cut(s)	377, 407
Bsc4I	CCNNNNNNNGG	3 cut(s)	1079, 1579, 1580
Bse1I	ACTGG	3 cut(s)	718, 883, 1376
Bse21I	CCTNAGG	1 cut(s)	1578
Bse3DI	GCAATG	1 cut(s)	938
Bse8I	GATNNNNATC	1 cut(s)	1188
BseAI	TCCGGA	1 cut(s)	1505
BseBI	CCWGG	1 cut(s)	297
BseDI	CCNNGG	1 cut(s)	221
BseGI	GGATG	8 cut(s)	511, 528, 674, 758, 1297, 1390, 1486, 1546
BseJI	GATNNNNATC	1 cut(s)	1188
BseLI	CCNNNNNNNGG	3 cut(s)	1079, 1579, 1580
BseMI	GCAATG	1 cut(s)	938
BseMII	CTCAG	7 cut(s)	54, 69, 327, 693, 950, 1332, 1503
BseNI	ACTGG	3 cut(s)	718, 883, 1376
BseRI	GAGGAG	1 cut(s)	155
BseX3I	CGGCCG	1 cut(s)	1445
BseXI	GCAGC	3 cut(s)	930, 1095, 1276
BseYI	CCCAGC	2 cut(s)	233, 352
Bsh1236I	CGCG	1 cut(s)	380
Bsh1285I	CGRYCG	1 cut(s)	1448
BshFI	GGCC	3 cut(s)	300, 763, 1447
BsiEI	CGRYCG	1 cut(s)	1448
BsiHKAI	GWGCWC	1 cut(s)	74
BsiSI	CCGG	3 cut(s)	221, 1506, 1528
BslFI	GGGAC	4 cut(s)	335, 1007, 1142, 1228
BslI	CCNNNNNNNGG	3 cut(s)	1079, 1579, 1580
BsmAI	GTCTC	2 cut(s)	45, 704
BsmFI	GGGAC	4 cut(s)	335, 1007, 1142, 1228
BsmI	GAATGC	1 cut(s)	783
BsnI	GGCC	3 cut(s)	300, 763, 1447
Bsp119I	TTCGAA	1 cut(s)	396
Bsp1286I	GDGCHC	1 cut(s)	74
Bsp13I	TCCGGA	1 cut(s)	1505
Bsp1407I	TGTACA	3 cut(s)	610, 846, 1171
Bsp143I	GATC	7 cut(s)	426, 444, 451, 894, 973, 1222, 1351
BspACI	CCGC	3 cut(s)	8, 467, 1444
BspANI	GGCC	3 cut(s)	300, 763, 1447
BspCNI	CTCAG	7 cut(s)	55, 68, 328, 692, 951, 1333, 1504
BspEI	TCCGGA	1 cut(s)	1505
BspFNI	CGCG	1 cut(s)	380
BspHI	TCATGA	1 cut(s)	1180
BspLI	GGNNCC	4 cut(s)	762, 1224, 1353, 1526
BspMI	ACCTGC	1 cut(s)	655
BspPI	GGATC	6 cut(s)	439, 889, 1217, 1230, 1346, 1359
BspT104I	TTCGAA	1 cut(s)	396
BsrDI	GCAATG	1 cut(s)	938
BsrGI	TGTACA	3 cut(s)	610, 846, 1171
BsrI	ACTGG	3 cut(s)	718, 883, 1376
BssECI	CCNNGG	1 cut(s)	221
BssMI	GATC	7 cut(s)	426, 444, 451, 894, 973, 1222, 1351
BssNAI	GTATAC	1 cut(s)	623
BssSI	CACGAG	1 cut(s)	414
Bst1107I	GTATAC	1 cut(s)	623
Bst2BI	CACGAG	1 cut(s)	414
Bst2UI	CCWGG	1 cut(s)	297
Bst4CI	ACNGT	5 cut(s)	310, 485, 664, 1115, 1178
Bst6I	CTCTTC	2 cut(s)	96, 1514
BstAPI	GCANNNNNTGC	1 cut(s)	210
BstAUI	TGTACA	3 cut(s)	610, 846, 1171
BstBAI	YACGTR	1 cut(s)	1397
BstBI	TTCGAA	1 cut(s)	396
BstC8I	GCNNGC	2 cut(s)	316, 1463
BstF5I	GGATG	8 cut(s)	511, 528, 674, 758, 1297, 1390, 1486, 1546
BstFNI	CGCG	1 cut(s)	380
BstHHI	GCGC	1 cut(s)	382
BstKTI	GATC	7 cut(s)	429, 447, 454, 897, 976, 1225, 1354
BstMAI	GTCTC	2 cut(s)	45, 704
BstMBI	GATC	7 cut(s)	426, 444, 451, 894, 973, 1222, 1351
BstMCI	CGRYCG	1 cut(s)	1448
BstMWI	GCNNNNNNNGC	1 cut(s)	210
BstNI	CCWGG	1 cut(s)	297
BstNSI	RCATGY	2 cut(s)	318, 443
BstPAI	GACNNNNGTC	1 cut(s)	999
BstSCI	CCNGG	2 cut(s)	220, 295
BstSFI	CTRYAG	1 cut(s)	306
BstUI	CGCG	1 cut(s)	380
BstV1I	GCAGC	3 cut(s)	930, 1095, 1276
BstX2I	RGATCY	2 cut(s)	1222, 1351
BstXI	CCANNNNNNTGG	1 cut(s)	771
BstYI	RGATCY	2 cut(s)	1222, 1351
BstZ17I	GTATAC	1 cut(s)	623
BstZI	CGGCCG	1 cut(s)	1445
Bsu36I	CCTNAGG	1 cut(s)	1578
BsuI	GTATCC	1 cut(s)	1144
BsuRI	GGCC	3 cut(s)	300, 763, 1447
BtsCI	GGATG	8 cut(s)	511, 528, 674, 758, 1297, 1390, 1486, 1546
BtsI	GCAGTG	1 cut(s)	928
BtsIMutI	CAGTG	4 cut(s)	315, 699, 928, 1383
BveI	ACCTGC	1 cut(s)	655
Cac8I	GCNNGC	2 cut(s)	316, 1463
CaiI	CAGNNNCTG	1 cut(s)	62
CciI	TCATGA	1 cut(s)	1180
CfoI	GCGC	1 cut(s)	382
Cfr13I	GGNCC	1 cut(s)	761
Csp6I	GTAC	4 cut(s)	584, 611, 847, 1172
CviAII	CATG	9 cut(s)	227, 315, 341, 440, 587, 634, 850, 1181, 1348
CviQI	GTAC	4 cut(s)	584, 611, 847, 1172
DpnI	GATC	7 cut(s)	428, 446, 453, 896, 975, 1224, 1353
DpnII	GATC	7 cut(s)	426, 444, 451, 894, 973, 1222, 1351
DraI	TTTAAA	2 cut(s)	643, 1593
DraIII	CACNNNGTG	1 cut(s)	328
EaeI	YGGCCR	2 cut(s)	298, 1445
EagI	CGGCCG	1 cut(s)	1445
Eam1104I	CTCTTC	2 cut(s)	96, 1514
EarI	CTCTTC	2 cut(s)	96, 1514
Ecl136II	GAGCTC	1 cut(s)	72
EclXI	CGGCCG	1 cut(s)	1445
Eco24I	GRGCYC	1 cut(s)	74
Eco32I	GATATC	1 cut(s)	796
Eco52I	CGGCCG	1 cut(s)	1445
Eco53kI	GAGCTC	1 cut(s)	72
Eco57I	CTGAAG	2 cut(s)	99, 1496
Eco72I	CACGTG	1 cut(s)	1397
Eco81I	CCTNAGG	1 cut(s)	1578
EcoICRI	GAGCTC	1 cut(s)	72
EcoRII	CCWGG	1 cut(s)	295
EcoRV	GATATC	1 cut(s)	796
EcoT38I	GRGCYC	1 cut(s)	74
FaeI	CATG	9 cut(s)	230, 318, 344, 443, 590, 637, 853, 1184, 1351
FalI	AAGNNNNNCTT	4 cut(s)	263, 295, 543, 575
FaqI	GGGAC	4 cut(s)	335, 1007, 1142, 1228
FatI	CATG	9 cut(s)	226, 314, 340, 439, 586, 633, 849, 1180, 1347
FauI	CCCGC	1 cut(s)	15
FbaI	TGATCA	1 cut(s)	973
FblI	GTMKAC	2 cut(s)	487, 622
Fnu4HI	GCNGC	4 cut(s)	944, 1084, 1290, 1445
FokI	GGATG	8 cut(s)	498, 515, 661, 765, 1284, 1377, 1493, 1553
FriOI	GRGCYC	1 cut(s)	74
Fsp4HI	GCNGC	4 cut(s)	944, 1084, 1290, 1445
FspBI	CTAG	2 cut(s)	498, 1334
GlaI	GCGC	1 cut(s)	381
GluI	GCNGC	4 cut(s)	944, 1084, 1290, 1445
GsaI	CCCAGC	2 cut(s)	237, 356
GsuI	CTGGAG	3 cut(s)	404, 561, 793
HaeIII	GGCC	3 cut(s)	300, 763, 1447
HapII	CCGG	3 cut(s)	221, 1506, 1528
HhaI	GCGC	1 cut(s)	382
Hin1II	CATG	9 cut(s)	230, 318, 344, 443, 590, 637, 853, 1184, 1351
Hin6I	GCGC	1 cut(s)	380
HinP1I	GCGC	1 cut(s)	380
HincII	GTYRAC	1 cut(s)	1054
HindII	GTYRAC	1 cut(s)	1054
HinfI	GANTC	9 cut(s)	53, 59, 857, 924, 1130, 1201, 1232, 1241, 1553
HpaI	GTTAAC	1 cut(s)	1054
HpaII	CCGG	3 cut(s)	221, 1506, 1528
HphI	GGTGA	1 cut(s)	505
Hpy166II	GTNNAC	6 cut(s)	488, 613, 623, 1054, 1174, 1381
Hpy188I	TCNGA	9 cut(s)	58, 64, 79, 426, 682, 732, 1074, 1200, 1558
Hpy188III	TCNNGA	6 cut(s)	31, 193, 430, 540, 1181, 1506
Hpy8I	GTNNAC	6 cut(s)	488, 613, 623, 1054, 1174, 1381
Hpy99I	CGWCG	1 cut(s)	1005
HpyAV	CCTTC	5 cut(s)	28, 962, 1444, 1471, 1478
HpyCH4III	ACNGT	5 cut(s)	310, 485, 664, 1115, 1178
HpyCH4IV	ACGT	2 cut(s)	26, 1396
HpyF10VI	GCNNNNNNNGC	1 cut(s)	210
HpySE526I	ACGT	2 cut(s)	26, 1396
Hsp92II	CATG	9 cut(s)	230, 318, 344, 443, 590, 637, 853, 1184, 1351
HspAI	GCGC	1 cut(s)	380
Kpn2I	TCCGGA	1 cut(s)	1505
Ksp22I	TGATCA	1 cut(s)	973
KspAI	GTTAAC	1 cut(s)	1054
Kzo9I	GATC	7 cut(s)	426, 444, 451, 894, 973, 1222, 1351
LmnI	GCTCC	4 cut(s)	427, 869, 1286, 1508
Lsp1109I	GCAGC	3 cut(s)	930, 1095, 1276
LweI	GCATC	3 cut(s)	683, 1306, 1421
MaeI	CTAG	2 cut(s)	498, 1334
MaeII	ACGT	2 cut(s)	26, 1396
MaeIII	GTNAC	4 cut(s)	374, 493, 1262, 1428
MalI	GATC	7 cut(s)	428, 446, 453, 896, 975, 1224, 1353
MboI	GATC	7 cut(s)	426, 444, 451, 894, 973, 1222, 1351
MflI	RGATCY	2 cut(s)	1222, 1351
MhlI	GDGCHC	1 cut(s)	74
MlsI	TGGCCA	1 cut(s)	300
MluCI	AATT	5 cut(s)	717, 888, 1005, 1089, 1588
MluNI	TGGCCA	1 cut(s)	300
MlyI	GAGTC	7 cut(s)	47, 53, 918, 1124, 1195, 1226, 1250
MmeI	TCCRAC	3 cut(s)	93, 539, 901
Mox20I	TGGCCA	1 cut(s)	300
MroI	TCCGGA	1 cut(s)	1505
MscI	TGGCCA	1 cut(s)	300
MseI	TTAA	4 cut(s)	642, 741, 1053, 1592
MslI	CAYNNNNRTG	4 cut(s)	308, 1044, 1179, 1395
Msp20I	TGGCCA	1 cut(s)	300
MspA1I	CMGCKG	1 cut(s)	771
MspI	CCGG	3 cut(s)	221, 1506, 1528
MspR9I	CCNGG	2 cut(s)	222, 297
MssI	GTTTAAAC	1 cut(s)	643
Mva1269I	GAATGC	1 cut(s)	783
MvaI	CCWGG	1 cut(s)	297
MvnI	CGCG	1 cut(s)	380
MwoI	GCNNNNNNNGC	1 cut(s)	210
NciI	CCSGG	1 cut(s)	222
NdeII	GATC	7 cut(s)	426, 444, 451, 894, 973, 1222, 1351
NlaIII	CATG	9 cut(s)	230, 318, 344, 443, 590, 637, 853, 1184, 1351
NlaIV	GGNNCC	4 cut(s)	762, 1224, 1353, 1526
NmeAIII	GCCGAG	2 cut(s)	1187, 1214
NmuCI	GTSAC	2 cut(s)	493, 1428
NspI	RCATGY	2 cut(s)	318, 443
NspV	TTCGAA	1 cut(s)	396
OliI	CACNNNNGTG	2 cut(s)	308, 1044
PaeI	GCATGC	1 cut(s)	318
PagI	TCATGA	1 cut(s)	1180
PciI	ACATGT	1 cut(s)	439
PctI	GAATGC	1 cut(s)	783
PfeI	GAWTC	2 cut(s)	857, 1553
PkrI	GCNGC	4 cut(s)	945, 1085, 1291, 1446
PleI	GAGTC	7 cut(s)	47, 53, 918, 1124, 1195, 1226, 1249
PmaCI	CACGTG	1 cut(s)	1397
PmeI	GTTTAAAC	1 cut(s)	643
PmlI	CACGTG	1 cut(s)	1397
PpsI	GAGTC	7 cut(s)	47, 53, 918, 1124, 1195, 1226, 1249
Ppu21I	YACGTR	1 cut(s)	1397
PscI	ACATGT	1 cut(s)	439
PshAI	GACNNNNGTC	1 cut(s)	999
Psp124BI	GAGCTC	1 cut(s)	74
Psp6I	CCWGG	1 cut(s)	295
PspCI	CACGTG	1 cut(s)	1397
PspFI	CCCAGC	2 cut(s)	233, 352
PspGI	CCWGG	1 cut(s)	295
PspN4I	GGNNCC	4 cut(s)	762, 1224, 1353, 1526
PspPI	GGNCC	1 cut(s)	761
PstNI	CAGNNNCTG	1 cut(s)	62
PsuI	RGATCY	2 cut(s)	1222, 1351
PvuII	CAGCTG	1 cut(s)	771
RsaI	GTAC	4 cut(s)	585, 612, 848, 1173
RsaNI	GTAC	4 cut(s)	584, 611, 847, 1172
RseI	CAYNNNNRTG	4 cut(s)	308, 1044, 1179, 1395
SacI	GAGCTC	1 cut(s)	74
SaqAI	TTAA	4 cut(s)	642, 741, 1053, 1592
SatI	GCNGC	4 cut(s)	944, 1084, 1290, 1445
Sau3AI	GATC	7 cut(s)	426, 444, 451, 894, 973, 1222, 1351
Sau96I	GGNCC	1 cut(s)	761
SchI	GAGTC	7 cut(s)	47, 53, 918, 1124, 1195, 1226, 1250
ScrFI	CCNGG	2 cut(s)	222, 297
SduI	GDGCHC	1 cut(s)	74
SfaNI	GCATC	3 cut(s)	683, 1306, 1421
SfcI	CTRYAG	1 cut(s)	306
SfuI	TTCGAA	1 cut(s)	396
SmiMI	CAYNNNNRTG	4 cut(s)	308, 1044, 1179, 1395
SmlI	CTYRAG	2 cut(s)	191, 1634
SmoI	CTYRAG	2 cut(s)	191, 1634
SpeI	ACTAGT	1 cut(s)	1333
SphI	GCATGC	1 cut(s)	318
Sse9I	AATT	5 cut(s)	717, 888, 1005, 1089, 1588
SsiI	CCGC	3 cut(s)	8, 467, 1444
SspMI	CTAG	2 cut(s)	498, 1334
SstI	GAGCTC	1 cut(s)	74
StyD4I	CCNGG	2 cut(s)	220, 295
TaaI	ACNGT	5 cut(s)	310, 485, 664, 1115, 1178
TaiI	ACGT	2 cut(s)	29, 1399
TaqI	TCGA	3 cut(s)	138, 396, 1003
TasI	AATT	5 cut(s)	717, 888, 1005, 1089, 1588
TatI	WGTACW	4 cut(s)	583, 610, 846, 1171
TauI	GCSGC	1 cut(s)	1447
TfiI	GAWTC	2 cut(s)	857, 1553
Tru1I	TTAA	4 cut(s)	642, 741, 1053, 1592
Tru9I	TTAA	4 cut(s)	642, 741, 1053, 1592
TscAI	CASTG	4 cut(s)	315, 706, 935, 1383
TseFI	GTSAC	2 cut(s)	493, 1428
TseI	GCWGC	3 cut(s)	943, 1083, 1289
Tsp45I	GTSAC	2 cut(s)	493, 1428
TspGWI	ACGGA	1 cut(s)	1299
TspRI	CASTG	4 cut(s)	315, 706, 935, 1383
XapI	RAATTY	3 cut(s)	717, 1089, 1588
XceI	RCATGY	2 cut(s)	318, 443
XmiI	GTMKAC	2 cut(s)	487, 622
XspI	CTAG	2 cut(s)	498, 1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.