Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0006143

Physical Location & Seq

Genomic Coordinates Reverse (-)

14613021 .. 14618470

Gene Structure 5450 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00011560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGCCCCCGCAGACCAGAAGAATGCCATTTCCGAAGGTGGTGATCGAGCGAGACACCGACTCCGAGCAAAGCTCATCGGAAGAAGAAGAAGACGAAGACGAACCGGCGGTGTTGGTGGAGAGCGATAATGAAGAGAAAGCTGACGAGGCCAAGAAGAAAGGGAAAGCGCCCATTACTATTTCTCTCAAGAAAGTTTGCAAGGTTTGTAAGAAGCCTGGACATGAAGCTGGATTTAAAGGAGCTACTTATATTGATTGCCCAATGAAACCTTGCTTTCTCTGCAAAATGCCTGGCCATACTACAGTGACATGCCCGCATCGAGTAGCTACCGAGTATGGGGTCATCCCAGCAAAACGTAAAAATACCCGAAATGCATTGGAATATGCGTTGGAACGACAGATTAGACCTCAGATTCCTCCGATCAAGCCAGCATATGTGATCCCTGATCAAGTAAGTTGTGCGGTTATCAGATATCATAGTAGACGGGTAACTTGCTTGGAATTCCATCCAACAAACAATAATATCCTTTTATCAGGAGATAAGAAAGGACAGCTTGGAGTCTGGGATTTTCGCAAAGTATATGAGAAGGTTGTTTATGGAAATGTACACTCATGTATACTAAACAATATGAAGTTTAGCCCTGCAAATGATGGTACGGTATATGCTGCATCCTCAGATGGAACCGTTAGTTGCACTGATGTCGAGACTGGAATTGCATTGTCTCTGATGAATCTCAACCCTGCCGGTTGGCAGGGTCCAAGCACCTGGAGAATGCTGTATGGCATGGATATCAATGCAGAGAAAGGTGCCGTGCTTGTTGCTGATAACTTTGGTTTCCTCTACTTGGTTGATACTCGCTCAAATAACAGAACAGGGAAACCAATTTTGATCCATAAGAAAGGTAGCAAAGTTGTTGGACTTCACTGCAATCCTGTTCAACCAGACCTTCTCTTGAGTTGTGGAAATGATCATTTTGCTCGCATATGGGACATTCGTCGAATTGAAGATGGTTCCTCCATTTATGACCTTCCACACAGCCGTGTTGTTAACTCTGCGTATTTTTCTCCAGTATCCGGCAGTAAAATTCTTACCACTTCACAGGACAACCGTCTTTGTATATGGGATTCCATATTTGGCAATATGGATTCCCCAAGCCGAGAGATTGTACACAGTCATGATTTTAATCGGTATCTGACTCCTTTCCGAGCCGAATGGGATCCAAAGGACCCGTCAGAGTCACTTGCAGTTATTGGTCGTTATATAAGTGAAAACTATAATGGAGCTGCTCTGCATCCCATTGATTTCATAGACATCAGTACAGGGCAACTAGTTGCTGAGATCATGGATCCAAACATTACTACAATCACTCCAGTGAACAAGCTACATCCACGTGATGATGTTTTGGCATCTGGTAGTTCAAGGTCACTTTTCATTTGGCGGCCAAAGGAAAAGTCTGAGCCTGTGGAACAGATGGATGTTGGGAAGATTTTTGTTTGCGACAGAGATGATAAAAAGAGAAGAAAACGGAAGTTTGGGGGTGAAAGTGATGATTCTGATGATGACAAGTCCATCCCCAAGGGCAAGCGGTTTAAGTCCCAAAAGAAATCTCAGTCCAAGTCAAGTCTATCTGTTAAGGTCAGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0031461 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04115 ko04120 ko05161 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03420 map04115 map04120 map05161 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

WD40

Protein Analysis

548

Amino Acids

61.45

Weight (kDa)

8.66

Isoelectric Point (pI)

48.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	156 - 239	1.5e-06	THOC3 beta-propeller domain
Beta-prop_EIPR1	PF23609	159 - 229	6.8e-06	EIPR1 beta-propeller
WD40_CDC20-Fz	PF24807	210 - 378	6.4e-08	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	271 - 374	3.6e-06	EIPR1 beta-propeller
Beta-prop_THOC3	PF25174	300 - 376	3.7e-06	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58760 AT5G58760
fragaria_vesca	FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500
malus_domestica	MD11G1075200.v1.1
prunus_persica	Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1
pyrus_communis	pycom03g05740 pycom11g06250
rosa_chinensis	RchiOBHm_Chr5g0069361
rosa_laevigata	RLG00000036049
rosa_multiflora	Rmu_sc0002658.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011560
rosa_rugosa	Rorug05G0397300
rosa_samantha	Rh5AG453900 Rh5BG472900 Rh5CG495500 Rh5DG485300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	806
AccI	GTMKAC	2 cut(s)	481, 616
AciI	CCGC	6 cut(s)	8, 107, 314, 461, 1438, 1585
AclWI	GGATC	6 cut(s)	433, 883, 1211, 1224, 1340, 1353
AcoI	YGGCCR	2 cut(s)	292, 1439
AcsI	RAATTY	2 cut(s)	500, 1083
AcvI	CACGTG	1 cut(s)	1391
AfaI	GTAC	4 cut(s)	606, 655, 1167, 1318
AfiI	CCNNNNNNNGG	3 cut(s)	336, 844, 1073
AgsI	TTSAA	3 cut(s)	938, 1004, 1419
AhlI	ACTAGT	1 cut(s)	1327
AjnI	CCWGG	3 cut(s)	214, 289, 764
AleI	CACNNNNGTG	2 cut(s)	1038, 1370
AluBI	AGCT	8 cut(s)	72, 140, 227, 242, 326, 553, 1283, 1381
AluI	AGCT	8 cut(s)	72, 140, 227, 242, 326, 553, 1283, 1381
Alw26I	GTCTC	3 cut(s)	45, 698, 726
AlwI	GGATC	6 cut(s)	433, 883, 1211, 1224, 1340, 1353
AlwNI	CAGNNNCTG	1 cut(s)	1644
AoxI	GGCC	3 cut(s)	147, 292, 1439
ApeKI	GCWGC	2 cut(s)	665, 1283
ApoI	RAATTY	2 cut(s)	500, 1083
ArsI	GACNNNNNNTTYG	4 cut(s)	1214, 1246, 1436, 1468
AspLEI	GCGC	1 cut(s)	169
AspS9I	GGNCC	2 cut(s)	755, 1225
AsuHPI	GGTGA	2 cut(s)	52, 1550
AvaII	GGWCC	2 cut(s)	755, 1225
BalI	TGGCCA	1 cut(s)	294
BamHI	GGATCC	2 cut(s)	1216, 1345
BanI	GGYRCC	1 cut(s)	806
BbrPI	CACGTG	1 cut(s)	1391
BbsI	GAAGAC	2 cut(s)	96, 102
BbvI	GCAGC	2 cut(s)	652, 1270
BccI	CCATC	6 cut(s)	513, 644, 671, 1001, 1465, 1577
BceAI	ACGGC	2 cut(s)	794, 1023
BcgI	CGANNNNNNTGC	2 cut(s)	682, 716
BciT130I	CCWGG	3 cut(s)	216, 291, 766
BciVI	GTATCC	1 cut(s)	1081
BclI	TGATCA	2 cut(s)	445, 967
BcoDI	GTCTC	3 cut(s)	45, 698, 726
BcuI	ACTAGT	1 cut(s)	1327
BfaI	CTAG	1 cut(s)	1328
BfmI	CTRYAG	1 cut(s)	300
BfoI	RGCGCY	1 cut(s)	170
BfuI	GTATCC	1 cut(s)	1081
BisI	GCNGC	3 cut(s)	666, 1284, 1439
BlsI	GCNGC	3 cut(s)	667, 1285, 1440
Bme1390I	CCNGG	3 cut(s)	216, 291, 766
Bme18I	GGWCC	2 cut(s)	755, 1225
BmgT120I	GGNCC	2 cut(s)	755, 1225
BmiI	GGNNCC	7 cut(s)	682, 756, 808, 1012, 1218, 1227, 1347
BmrFI	CCNGG	3 cut(s)	216, 291, 766
BmsI	GCATC	4 cut(s)	325, 677, 1300, 1415
BoxI	GACNNNNGTC	2 cut(s)	993, 1107
BpiI	GAAGAC	2 cut(s)	96, 102
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	3 cut(s)	787, 1050, 1353
BpuEI	CTTGAG	2 cut(s)	170, 973
BsaAI	YACGTR	1 cut(s)	1391
BsaBI	GATNNNNATC	1 cut(s)	1182
BsaJI	CCNNGG	1 cut(s)	1575
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 1351, 1381
Bsc4I	CCNNNNNNNGG	3 cut(s)	336, 844, 1073
Bse118I	RCCGGY	2 cut(s)	103, 743
Bse1I	ACTGG	3 cut(s)	712, 1067, 1370
Bse8I	GATNNNNATC	1 cut(s)	1182
BseBI	CCWGG	3 cut(s)	216, 291, 766
BseDI	CCNNGG	1 cut(s)	1575
BseGI	GGATG	7 cut(s)	342, 505, 668, 1291, 1384, 1480, 1569
BseJI	GATNNNNATC	1 cut(s)	1182
BseLI	CCNNNNNNNGG	3 cut(s)	336, 844, 1073
BseMII	CTCAG	5 cut(s)	422, 687, 1326, 1446, 1622
BseNI	ACTGG	3 cut(s)	712, 1067, 1370
BseXI	GCAGC	2 cut(s)	652, 1270
BseYI	CCCAGC	1 cut(s)	346
BshFI	GGCC	3 cut(s)	149, 294, 1441
BshNI	GGYRCC	1 cut(s)	806
BsiSI	CCGG	3 cut(s)	104, 744, 1074
BslFI	GGGAC	2 cut(s)	1001, 1579
BslI	CCNNNNNNNGG	3 cut(s)	336, 844, 1073
BsmAI	GTCTC	3 cut(s)	45, 698, 726
BsmFI	GGGAC	2 cut(s)	1001, 1579
BsmI	GAATGC	2 cut(s)	27, 777
BsnI	GGCC	3 cut(s)	149, 294, 1441
Bsp1407I	TGTACA	2 cut(s)	604, 1165
Bsp143I	GATC	9 cut(s)	42, 420, 438, 445, 888, 967, 1216, 1338, 1345
BspACI	CCGC	6 cut(s)	8, 107, 314, 461, 1438, 1585
BspANI	GGCC	3 cut(s)	149, 294, 1441
BspCNI	CTCAG	5 cut(s)	421, 686, 1327, 1447, 1621
BspHI	TCATGA	1 cut(s)	1174
BspLI	GGNNCC	7 cut(s)	682, 756, 808, 1012, 1218, 1227, 1347
BspPI	GGATC	6 cut(s)	433, 883, 1211, 1224, 1340, 1353
BspT107I	GGYRCC	1 cut(s)	806
BsrFI	RCCGGY	2 cut(s)	103, 743
BsrGI	TGTACA	2 cut(s)	604, 1165
BsrI	ACTGG	3 cut(s)	712, 1067, 1370
BssAI	RCCGGY	2 cut(s)	103, 743
BssECI	CCNNGG	1 cut(s)	1575
BssMI	GATC	9 cut(s)	42, 420, 438, 445, 888, 967, 1216, 1338, 1345
BssNAI	GTATAC	1 cut(s)	617
BssT1I	CCWWGG	1 cut(s)	1575
Bst1107I	GTATAC	1 cut(s)	617
Bst2UI	CCWGG	3 cut(s)	216, 291, 766
Bst4CI	ACNGT	5 cut(s)	304, 658, 685, 1109, 1172
Bst6I	CTCTTC	1 cut(s)	126
BstAUI	TGTACA	2 cut(s)	604, 1165
BstBAI	YACGTR	1 cut(s)	1391
BstC8I	GCNNGC	4 cut(s)	314, 429, 979, 1583
BstDEI	CTNAG	5 cut(s)	408, 673, 1335, 1455, 1608
BstF5I	GGATG	7 cut(s)	342, 505, 668, 1291, 1384, 1480, 1569
BstH2I	RGCGCY	1 cut(s)	170
BstHHI	GCGC	1 cut(s)	169
BstKTI	GATC	9 cut(s)	45, 423, 441, 448, 891, 970, 1219, 1341, 1348
BstMAI	GTCTC	3 cut(s)	45, 698, 726
BstMBI	GATC	9 cut(s)	42, 420, 438, 445, 888, 967, 1216, 1338, 1345
BstMWI	GCNNNNNNNGC	2 cut(s)	146, 279
BstNI	CCWGG	3 cut(s)	216, 291, 766
BstNSI	RCATGY	1 cut(s)	312
BstPAI	GACNNNNGTC	2 cut(s)	993, 1107
BstSCI	CCNGG	3 cut(s)	214, 289, 764
BstSFI	CTRYAG	1 cut(s)	300
BstV1I	GCAGC	2 cut(s)	652, 1270
BstV2I	GAAGAC	2 cut(s)	96, 102
BstX2I	RGATCY	2 cut(s)	1216, 1345
BstXI	CCANNNNNNTGG	1 cut(s)	765
BstYI	RGATCY	2 cut(s)	1216, 1345
BstZ17I	GTATAC	1 cut(s)	617
BsuI	GTATCC	1 cut(s)	1081
BsuRI	GGCC	3 cut(s)	149, 294, 1441
BtsCI	GGATG	7 cut(s)	342, 505, 668, 1291, 1384, 1480, 1569
BtsI	GCAGTG	1 cut(s)	922
BtsIMutI	CAGTG	4 cut(s)	309, 693, 922, 1377
Cac8I	GCNNGC	4 cut(s)	314, 429, 979, 1583
CaiI	CAGNNNCTG	1 cut(s)	1644
CciI	TCATGA	1 cut(s)	1174
CfoI	GCGC	1 cut(s)	169
Cfr10I	RCCGGY	2 cut(s)	103, 743
Cfr13I	GGNCC	2 cut(s)	755, 1225
Csp6I	GTAC	4 cut(s)	605, 654, 1166, 1317
CviAII	CATG	6 cut(s)	221, 309, 612, 784, 1175, 1342
CviQI	GTAC	4 cut(s)	605, 654, 1166, 1317
DdeI	CTNAG	5 cut(s)	408, 673, 1335, 1455, 1608
DpnI	GATC	9 cut(s)	44, 422, 440, 447, 890, 969, 1218, 1340, 1347
DpnII	GATC	9 cut(s)	42, 420, 438, 445, 888, 967, 1216, 1338, 1345
DraI	TTTAAA	1 cut(s)	235
EaeI	YGGCCR	2 cut(s)	292, 1439
Eam1104I	CTCTTC	1 cut(s)	126
EarI	CTCTTC	1 cut(s)	126
Eco130I	CCWWGG	1 cut(s)	1575
Eco32I	GATATC	2 cut(s)	473, 790
Eco47I	GGWCC	2 cut(s)	755, 1225
Eco72I	CACGTG	1 cut(s)	1391
EcoO109I	RGGNCCY	1 cut(s)	1225
EcoRI	GAATTC	1 cut(s)	500
EcoRII	CCWGG	3 cut(s)	214, 289, 764
EcoRV	GATATC	2 cut(s)	473, 790
EcoT14I	CCWWGG	1 cut(s)	1575
EcoT22I	ATGCAT	1 cut(s)	376
ErhI	CCWWGG	1 cut(s)	1575
FaeI	CATG	6 cut(s)	224, 312, 615, 787, 1178, 1345
FalI	AAGNNNNNCTT	2 cut(s)	537, 569
FaqI	GGGAC	2 cut(s)	1001, 1579
FatI	CATG	6 cut(s)	220, 308, 611, 783, 1174, 1341
FauI	CCCGC	2 cut(s)	15, 321
FauNDI	CATATG	2 cut(s)	433, 983
FbaI	TGATCA	2 cut(s)	445, 967
FblI	GTMKAC	2 cut(s)	481, 616
Fnu4HI	GCNGC	3 cut(s)	666, 1284, 1439
FokI	GGATG	7 cut(s)	329, 492, 655, 1278, 1371, 1487, 1556
Fsp4HI	GCNGC	3 cut(s)	666, 1284, 1439
FspBI	CTAG	1 cut(s)	1328
GlaI	GCGC	1 cut(s)	168
GluI	GCNGC	3 cut(s)	666, 1284, 1439
GsaI	CCCAGC	1 cut(s)	350
GsuI	CTGGAG	3 cut(s)	787, 1050, 1353
HaeII	RGCGCY	1 cut(s)	170
HaeIII	GGCC	3 cut(s)	149, 294, 1441
HapII	CCGG	3 cut(s)	104, 744, 1074
HhaI	GCGC	1 cut(s)	169
Hin1II	CATG	6 cut(s)	224, 312, 615, 787, 1178, 1345
Hin6I	GCGC	1 cut(s)	167
HinP1I	GCGC	1 cut(s)	167
HincII	GTYRAC	1 cut(s)	1048
HindII	GTYRAC	1 cut(s)	1048
HinfI	GANTC	9 cut(s)	59, 412, 558, 730, 1124, 1145, 1195, 1235, 1550
HpaI	GTTAAC	1 cut(s)	1048
HpaII	CCGG	3 cut(s)	104, 744, 1074
HphI	GGTGA	2 cut(s)	52, 1550
Hpy166II	GTNNAC	6 cut(s)	482, 607, 617, 1048, 1168, 1375
Hpy188III	TCNNGA	5 cut(s)	187, 534, 703, 952, 1175
Hpy8I	GTNNAC	6 cut(s)	482, 607, 617, 1048, 1168, 1375
Hpy99I	CGWCG	1 cut(s)	999
HpyAV	CCTTC	4 cut(s)	28, 580, 956, 1037
HpyCH4III	ACNGT	5 cut(s)	304, 658, 685, 1109, 1172
HpyCH4IV	ACGT	2 cut(s)	355, 1390
HpyF10VI	GCNNNNNNNGC	2 cut(s)	146, 279
HpyF3I	CTNAG	5 cut(s)	408, 673, 1335, 1455, 1608
HpySE526I	ACGT	2 cut(s)	355, 1390
Hsp92II	CATG	6 cut(s)	224, 312, 615, 787, 1178, 1345
HspAI	GCGC	1 cut(s)	167
Ksp22I	TGATCA	2 cut(s)	445, 967
KspAI	GTTAAC	1 cut(s)	1048
Kzo9I	GATC	9 cut(s)	42, 420, 438, 445, 888, 967, 1216, 1338, 1345
LmnI	GCTCC	2 cut(s)	239, 1280
Lsp1109I	GCAGC	2 cut(s)	652, 1270
LweI	GCATC	4 cut(s)	325, 677, 1300, 1415
MaeI	CTAG	1 cut(s)	1328
MaeII	ACGT	2 cut(s)	355, 1390
MaeIII	GTNAC	4 cut(s)	304, 487, 1236, 1422
MalI	GATC	9 cut(s)	44, 422, 440, 447, 890, 969, 1218, 1340, 1347
MboI	GATC	9 cut(s)	42, 420, 438, 445, 888, 967, 1216, 1338, 1345
MflI	RGATCY	2 cut(s)	1216, 1345
MlsI	TGGCCA	1 cut(s)	294
MluCI	AATT	5 cut(s)	500, 711, 882, 999, 1083
MluNI	TGGCCA	1 cut(s)	294
MlyI	GAGTC	4 cut(s)	53, 567, 1189, 1244
MmeI	TCCRAC	3 cut(s)	369, 533, 895
MnlI	CCTC	6 cut(s)	139, 417, 426, 682, 848, 1024
Mox20I	TGGCCA	1 cut(s)	294
Mph1103I	ATGCAT	1 cut(s)	376
MscI	TGGCCA	1 cut(s)	294
MseI	TTAA	5 cut(s)	234, 1047, 1182, 1590, 1632
MslI	CAYNNNNRTG	4 cut(s)	1038, 1173, 1370, 1389
Msp20I	TGGCCA	1 cut(s)	294
MspI	CCGG	3 cut(s)	104, 744, 1074
MspR9I	CCNGG	3 cut(s)	216, 291, 766
Mva1269I	GAATGC	2 cut(s)	27, 777
MvaI	CCWGG	3 cut(s)	216, 291, 766
MwoI	GCNNNNNNNGC	2 cut(s)	146, 279
NdeI	CATATG	2 cut(s)	433, 983
NdeII	GATC	9 cut(s)	42, 420, 438, 445, 888, 967, 1216, 1338, 1345
NlaIII	CATG	6 cut(s)	224, 312, 615, 787, 1178, 1345
NlaIV	GGNNCC	7 cut(s)	682, 756, 808, 1012, 1218, 1227, 1347
NmeAIII	GCCGAG	1 cut(s)	1181
NmuCI	GTSAC	3 cut(s)	304, 1236, 1422
NsiI	ATGCAT	1 cut(s)	376
NspI	RCATGY	1 cut(s)	312
OliI	CACNNNNGTG	2 cut(s)	1038, 1370
PagI	TCATGA	1 cut(s)	1174
PctI	GAATGC	2 cut(s)	27, 777
PfeI	GAWTC	5 cut(s)	412, 730, 1124, 1145, 1550
PkrI	GCNGC	3 cut(s)	667, 1285, 1440
PleI	GAGTC	4 cut(s)	53, 566, 1189, 1243
PmaCI	CACGTG	1 cut(s)	1391
PmlI	CACGTG	1 cut(s)	1391
PpsI	GAGTC	4 cut(s)	53, 566, 1189, 1243
Ppu21I	YACGTR	1 cut(s)	1391
PpuMI	RGGWCCY	1 cut(s)	1225
PshAI	GACNNNNGTC	2 cut(s)	993, 1107
Psp5II	RGGWCCY	1 cut(s)	1225
Psp6I	CCWGG	3 cut(s)	214, 289, 764
PspCI	CACGTG	1 cut(s)	1391
PspFI	CCCAGC	1 cut(s)	346
PspGI	CCWGG	3 cut(s)	214, 289, 764
PspN4I	GGNNCC	7 cut(s)	682, 756, 808, 1012, 1218, 1227, 1347
PspPI	GGNCC	2 cut(s)	755, 1225
PspPPI	RGGWCCY	1 cut(s)	1225
PstNI	CAGNNNCTG	1 cut(s)	1644
PsuI	RGATCY	2 cut(s)	1216, 1345
RsaI	GTAC	4 cut(s)	606, 655, 1167, 1318
RsaNI	GTAC	4 cut(s)	605, 654, 1166, 1317
RseI	CAYNNNNRTG	4 cut(s)	1038, 1173, 1370, 1389
SaqAI	TTAA	5 cut(s)	234, 1047, 1182, 1590, 1632
SatI	GCNGC	3 cut(s)	666, 1284, 1439
Sau3AI	GATC	9 cut(s)	42, 420, 438, 445, 888, 967, 1216, 1338, 1345
Sau96I	GGNCC	2 cut(s)	755, 1225
SchI	GAGTC	4 cut(s)	53, 567, 1189, 1244
ScrFI	CCNGG	3 cut(s)	216, 291, 766
SfaNI	GCATC	4 cut(s)	325, 677, 1300, 1415
SfcI	CTRYAG	1 cut(s)	300
SinI	GGWCC	2 cut(s)	755, 1225
SmiMI	CAYNNNNRTG	4 cut(s)	1038, 1173, 1370, 1389
SmlI	CTYRAG	2 cut(s)	185, 952
SmoI	CTYRAG	2 cut(s)	185, 952
SpeI	ACTAGT	1 cut(s)	1327
Sse9I	AATT	5 cut(s)	500, 711, 882, 999, 1083
SsiI	CCGC	6 cut(s)	8, 107, 314, 461, 1438, 1585
SspMI	CTAG	1 cut(s)	1328
StyD4I	CCNGG	3 cut(s)	214, 289, 764
StyI	CCWWGG	1 cut(s)	1575
TaaI	ACNGT	5 cut(s)	304, 658, 685, 1109, 1172
TaiI	ACGT	2 cut(s)	358, 1393
TaqI	TCGA	4 cut(s)	45, 319, 702, 997
TasI	AATT	5 cut(s)	500, 711, 882, 999, 1083
TatI	WGTACW	3 cut(s)	604, 1165, 1316
TauI	GCSGC	1 cut(s)	1441
TfiI	GAWTC	5 cut(s)	412, 730, 1124, 1145, 1550
Tru1I	TTAA	5 cut(s)	234, 1047, 1182, 1590, 1632
Tru9I	TTAA	5 cut(s)	234, 1047, 1182, 1590, 1632
TscAI	CASTG	4 cut(s)	309, 700, 929, 1377
TseFI	GTSAC	3 cut(s)	304, 1236, 1422
TseI	GCWGC	2 cut(s)	665, 1283
Tsp45I	GTSAC	3 cut(s)	304, 1236, 1422
TspDTI	ATGAA	7 cut(s)	144, 237, 278, 644, 743, 1294, 1420
TspGWI	ACGGA	1 cut(s)	1540
TspRI	CASTG	4 cut(s)	309, 700, 929, 1377
VpaK11BI	GGWCC	2 cut(s)	755, 1225
XapI	RAATTY	2 cut(s)	500, 1083
XceI	RCATGY	1 cut(s)	312
XmiI	GTMKAC	2 cut(s)	481, 616
XspI	CTAG	1 cut(s)	1328
Zsp2I	ATGCAT	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.