Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0006143

Physical Location & Seq

Genomic Coordinates Forward (+)

75308630 .. 75313345

Gene Structure 4716 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036049

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGCCCCCGCAGACCAGAAGAATGCCATTTCCGAATGTGGTGATCGAGAGAGACACCGACTCCGAGCAAAGCTCGTCGGAAGAAGAAGAAGAAGAAGAAGAAGACGAACCGGCGGTGTTGGTGGAGAGCGAAAATGAAGAGAAAGCTGACGAGGCCAAGAAGAAAGGGAAAGCGCCCATTACTATTTCTCTCAAGAAAGTTTGCAAGGTTTGTAAGAAGCCTGGACATGAAGCTGGATTTAAAGGAGCTACTTATATTGATTGCCCAATGAAACCTTGCTTTCTTTGCAAAATGCCTGGCCATACTACAGTGACATGCCCGCATCGAGTAGCTACCGAGTATGGGGTCATCCCAGCAAAACGTAAAAATACCCGAAATGCATTGGAATATGCGTTCGAACGACAGATTAGACCTCGGATTCCTCCGATCAAGCCAGCATATGTGATCCCTGATCAAGTAAGTTGTGCGGTTATCAGATATCATAGTAGACGGGTAACTTGTTTGGAATTCCATCCAACAAACAATAATATCCTTTTATCAGGAGATAAGAAAGGACAGCTTGGAGTCTGGGATTTTCACAAAGTATATGAGAAGGTTGTTTATGGAAATGTACACTCATGTATACTAAACAATATGAAGTTTAGCCCTGCAAATGATGGTACAGTATATGCTGCATCCTCAGATGGAACCGTTAGTTGCACTGATGTCGAGACTGGAATTGCATTGTCTCTGATGAACCTCAACCCTGCCGGTTGGCAGGGTCCAAGCACCTGGAGAATGCTGTATGGCATGGATATCAATGCAGAGAAAGGTGCCGTACTTGTTGCTGATAACTTTGGTTTCCTCTACTTGGTTGATACTCGCTCAAATAACAGAACAGGGAAACCAATTTTGATCCATAAGAAAGGTAGCAAAGTTGTTGGACTTCACTGCAATCCTGTTCAACCAGACCTTCTCTTGAGTTGTGGAAATGATCATTTTGCTCGCATATGGGACATTCGTCGAATTGAAGATGGTTCCTCCATTTATGACCTTGCACACAGCCGTGTTGTTAACTCTGCATATTTTTCTCCAGTATCTGGCAGTAAAATTCTTACCACTTCACAGGACAACCGTCTTTGTATATGGGATTCCATATTTGGCAATATGGATTCCCCAAGCCGAGAGATTGTACACAGTCATGATTTTAATCGGTATCTGACTCCTTTCCGAGCCGAATGGGATCCAAAGGACCCGTCAGAGTCACTTGCAGTTATTGGTCGTTATATAAGTGAAAACTATAATGGAGCTGCTCTGCATCCCATTGATTTCATAGACATCAGTACAGGGCAACTAGTTGCTGAGATCATGGATCCAAACATTACTACAATCACTCCAGTGAACAAGCTACATCCACGTGATGATGTTTTGGCATCTGGTAGTTCAAGGTCACTTTTCATTTGGCGGCCAAAGGAAGAGTCTGAGCCTGTGGAACAGATGGATGTAGGGAAGATTTTTGTTTGCGACAGAGATGATAAAAAGAGAAGAAAACGGAAGTTTGGGGGTGAAAGTGATGATTCTGATGATGACAAGTCCATCCCCAAGGGCAAGAGGTTTAAGTCCCAAAAGAAATCTCAGTCCAAGTCAAGTCTCTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0031461 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04115 ko04120 ko05161 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03420 map04115 map04120 map05161 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

WD40

Protein Analysis

546

Amino Acids

61.12

Weight (kDa)

7.2

Isoelectric Point (pI)

50.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	158 - 240	5.7e-06	THOC3 beta-propeller domain
WDR55	PF24796	163 - 377	1.9e-06	WDR55
WD40_CDC20-Fz	PF24807	219 - 380	8.3e-08	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	273 - 376	7.4e-07	EIPR1 beta-propeller
Beta-prop_THOC3	PF25174	304 - 378	2.4e-06	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	315 - 379	9.3e-06	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0006143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58760 AT5G58760
fragaria_vesca	FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500 FvH4_3g38500
malus_domestica	MD11G1075200.v1.1
prunus_persica	Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1 Prupe.6G058000_v2.0.a1
pyrus_communis	pycom03g05740 pycom11g06250
rosa_chinensis	RchiOBHm_Chr5g0069361
rosa_laevigata	RLG00000036049
rosa_multiflora	Rmu_sc0002658.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011560
rosa_rugosa	Rorug05G0397300
rosa_samantha	Rh5AG453900 Rh5BG472900 Rh5CG495500 Rh5DG485300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	812
AccB7I	CCANNNNNTGG	1 cut(s)	1079
AccI	GTMKAC	2 cut(s)	487, 622
AciI	CCGC	5 cut(s)	8, 113, 320, 467, 1444
AclWI	GGATC	6 cut(s)	439, 889, 1217, 1230, 1346, 1359
AcoI	YGGCCR	2 cut(s)	298, 1445
AcsI	RAATTY	2 cut(s)	506, 1089
AcvI	CACGTG	1 cut(s)	1397
AfaI	GTAC	5 cut(s)	612, 661, 819, 1173, 1324
AfiI	CCNNNNNNNGG	3 cut(s)	342, 850, 1079
AgsI	TTSAA	3 cut(s)	944, 1010, 1425
AhlI	ACTAGT	1 cut(s)	1333
AjnI	CCWGG	3 cut(s)	220, 295, 770
AleI	CACNNNNGTG	2 cut(s)	1044, 1376
AloI	GAACNNNNNNTCC	2 cut(s)	377, 409
AluBI	AGCT	8 cut(s)	72, 146, 233, 248, 332, 559, 1289, 1387
AluI	AGCT	8 cut(s)	72, 146, 233, 248, 332, 559, 1289, 1387
Alw26I	GTCTC	4 cut(s)	45, 704, 732, 1634
AlwI	GGATC	6 cut(s)	439, 889, 1217, 1230, 1346, 1359
AlwNI	CAGNNNCTG	1 cut(s)	1079
AoxI	GGCC	3 cut(s)	153, 298, 1445
ApeKI	GCWGC	2 cut(s)	671, 1289
ApoI	RAATTY	2 cut(s)	506, 1089
ArsI	GACNNNNNNTTYG	4 cut(s)	1220, 1252, 1442, 1474
AspLEI	GCGC	1 cut(s)	175
AspS9I	GGNCC	2 cut(s)	761, 1231
AsuHPI	GGTGA	2 cut(s)	52, 1556
AsuII	TTCGAA	1 cut(s)	396
AvaII	GGWCC	2 cut(s)	761, 1231
BalI	TGGCCA	1 cut(s)	300
BamHI	GGATCC	2 cut(s)	1222, 1351
BanI	GGYRCC	1 cut(s)	812
BbrPI	CACGTG	1 cut(s)	1397
BbsI	GAAGAC	1 cut(s)	108
BbvI	GCAGC	2 cut(s)	658, 1276
BccI	CCATC	6 cut(s)	519, 650, 677, 1007, 1471, 1583
BceAI	ACGGC	2 cut(s)	800, 1029
BcgI	CGANNNNNNTGC	2 cut(s)	688, 722
BciT130I	CCWGG	3 cut(s)	222, 297, 772
BclI	TGATCA	2 cut(s)	451, 973
BcoDI	GTCTC	4 cut(s)	45, 704, 732, 1634
BcuI	ACTAGT	1 cut(s)	1333
BfaI	CTAG	1 cut(s)	1334
BfmI	CTRYAG	1 cut(s)	306
BfoI	RGCGCY	1 cut(s)	176
BisI	GCNGC	3 cut(s)	672, 1290, 1445
BlsI	GCNGC	3 cut(s)	673, 1291, 1446
Bme1390I	CCNGG	3 cut(s)	222, 297, 772
Bme18I	GGWCC	2 cut(s)	761, 1231
BmgT120I	GGNCC	2 cut(s)	761, 1231
BmiI	GGNNCC	7 cut(s)	688, 762, 814, 1018, 1224, 1233, 1353
BmrFI	CCNGG	3 cut(s)	222, 297, 772
BmsI	GCATC	4 cut(s)	331, 683, 1306, 1421
BoxI	GACNNNNGTC	2 cut(s)	999, 1113
BpiI	GAAGAC	1 cut(s)	108
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	3 cut(s)	793, 1056, 1359
Bpu14I	TTCGAA	1 cut(s)	396
BpuEI	CTTGAG	2 cut(s)	176, 979
BsaAI	YACGTR	1 cut(s)	1397
BsaBI	GATNNNNATC	1 cut(s)	1188
BsaJI	CCNNGG	2 cut(s)	413, 1581
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 1357, 1387
Bsc4I	CCNNNNNNNGG	3 cut(s)	342, 850, 1079
Bse118I	RCCGGY	2 cut(s)	109, 749
Bse1I	ACTGG	3 cut(s)	718, 1073, 1376
Bse8I	GATNNNNATC	1 cut(s)	1188
BseBI	CCWGG	3 cut(s)	222, 297, 772
BseDI	CCNNGG	2 cut(s)	413, 1581
BseGI	GGATG	7 cut(s)	348, 511, 674, 1297, 1390, 1486, 1575
BseJI	GATNNNNATC	1 cut(s)	1188
BseLI	CCNNNNNNNGG	3 cut(s)	342, 850, 1079
BseMII	CTCAG	4 cut(s)	693, 1332, 1452, 1628
BseNI	ACTGG	3 cut(s)	718, 1073, 1376
BseXI	GCAGC	2 cut(s)	658, 1276
BseYI	CCCAGC	1 cut(s)	352
BshFI	GGCC	3 cut(s)	155, 300, 1447
BshNI	GGYRCC	1 cut(s)	812
BsiSI	CCGG	2 cut(s)	110, 750
BslFI	GGGAC	2 cut(s)	1007, 1585
BslI	CCNNNNNNNGG	3 cut(s)	342, 850, 1079
BsmAI	GTCTC	4 cut(s)	45, 704, 732, 1634
BsmFI	GGGAC	2 cut(s)	1007, 1585
BsmI	GAATGC	2 cut(s)	27, 783
BsnI	GGCC	3 cut(s)	155, 300, 1447
Bsp119I	TTCGAA	1 cut(s)	396
Bsp1407I	TGTACA	2 cut(s)	610, 1171
Bsp143I	GATC	9 cut(s)	42, 426, 444, 451, 894, 973, 1222, 1344, 1351
BspACI	CCGC	5 cut(s)	8, 113, 320, 467, 1444
BspANI	GGCC	3 cut(s)	155, 300, 1447
BspCNI	CTCAG	4 cut(s)	692, 1333, 1453, 1627
BspHI	TCATGA	1 cut(s)	1180
BspLI	GGNNCC	7 cut(s)	688, 762, 814, 1018, 1224, 1233, 1353
BspPI	GGATC	6 cut(s)	439, 889, 1217, 1230, 1346, 1359
BspT104I	TTCGAA	1 cut(s)	396
BspT107I	GGYRCC	1 cut(s)	812
BsrFI	RCCGGY	2 cut(s)	109, 749
BsrGI	TGTACA	2 cut(s)	610, 1171
BsrI	ACTGG	3 cut(s)	718, 1073, 1376
BssAI	RCCGGY	2 cut(s)	109, 749
BssECI	CCNNGG	2 cut(s)	413, 1581
BssMI	GATC	9 cut(s)	42, 426, 444, 451, 894, 973, 1222, 1344, 1351
BssNAI	GTATAC	1 cut(s)	623
BssT1I	CCWWGG	1 cut(s)	1581
Bst1107I	GTATAC	1 cut(s)	623
Bst2UI	CCWGG	3 cut(s)	222, 297, 772
Bst4CI	ACNGT	5 cut(s)	310, 664, 691, 1115, 1178
Bst6I	CTCTTC	2 cut(s)	132, 1449
BstAUI	TGTACA	2 cut(s)	610, 1171
BstBAI	YACGTR	1 cut(s)	1397
BstBI	TTCGAA	1 cut(s)	396
BstC8I	GCNNGC	3 cut(s)	320, 435, 985
BstDEI	CTNAG	4 cut(s)	679, 1341, 1461, 1614
BstF5I	GGATG	7 cut(s)	348, 511, 674, 1297, 1390, 1486, 1575
BstH2I	RGCGCY	1 cut(s)	176
BstHHI	GCGC	1 cut(s)	175
BstKTI	GATC	9 cut(s)	45, 429, 447, 454, 897, 976, 1225, 1347, 1354
BstMAI	GTCTC	4 cut(s)	45, 704, 732, 1634
BstMBI	GATC	9 cut(s)	42, 426, 444, 451, 894, 973, 1222, 1344, 1351
BstMWI	GCNNNNNNNGC	2 cut(s)	152, 285
BstNI	CCWGG	3 cut(s)	222, 297, 772
BstNSI	RCATGY	1 cut(s)	318
BstPAI	GACNNNNGTC	2 cut(s)	999, 1113
BstSCI	CCNGG	3 cut(s)	220, 295, 770
BstSFI	CTRYAG	1 cut(s)	306
BstV1I	GCAGC	2 cut(s)	658, 1276
BstV2I	GAAGAC	1 cut(s)	108
BstX2I	RGATCY	2 cut(s)	1222, 1351
BstXI	CCANNNNNNTGG	1 cut(s)	771
BstYI	RGATCY	2 cut(s)	1222, 1351
BstZ17I	GTATAC	1 cut(s)	623
BsuRI	GGCC	3 cut(s)	155, 300, 1447
BtsCI	GGATG	7 cut(s)	348, 511, 674, 1297, 1390, 1486, 1575
BtsI	GCAGTG	1 cut(s)	928
BtsIMutI	CAGTG	4 cut(s)	315, 699, 928, 1383
Cac8I	GCNNGC	3 cut(s)	320, 435, 985
CaiI	CAGNNNCTG	1 cut(s)	1079
CciI	TCATGA	1 cut(s)	1180
CfoI	GCGC	1 cut(s)	175
Cfr10I	RCCGGY	2 cut(s)	109, 749
Cfr13I	GGNCC	2 cut(s)	761, 1231
Csp6I	GTAC	5 cut(s)	611, 660, 818, 1172, 1323
CviAII	CATG	6 cut(s)	227, 315, 618, 790, 1181, 1348
CviQI	GTAC	5 cut(s)	611, 660, 818, 1172, 1323
DdeI	CTNAG	4 cut(s)	679, 1341, 1461, 1614
DpnI	GATC	9 cut(s)	44, 428, 446, 453, 896, 975, 1224, 1346, 1353
DpnII	GATC	9 cut(s)	42, 426, 444, 451, 894, 973, 1222, 1344, 1351
DraI	TTTAAA	1 cut(s)	241
EaeI	YGGCCR	2 cut(s)	298, 1445
Eam1104I	CTCTTC	2 cut(s)	132, 1449
EarI	CTCTTC	2 cut(s)	132, 1449
Eco130I	CCWWGG	1 cut(s)	1581
Eco32I	GATATC	2 cut(s)	479, 796
Eco47I	GGWCC	2 cut(s)	761, 1231
Eco72I	CACGTG	1 cut(s)	1397
EcoO109I	RGGNCCY	1 cut(s)	1231
EcoRI	GAATTC	1 cut(s)	506
EcoRII	CCWGG	3 cut(s)	220, 295, 770
EcoRV	GATATC	2 cut(s)	479, 796
EcoT14I	CCWWGG	1 cut(s)	1581
EcoT22I	ATGCAT	1 cut(s)	382
ErhI	CCWWGG	1 cut(s)	1581
FaeI	CATG	6 cut(s)	230, 318, 621, 793, 1184, 1351
FalI	AAGNNNNNCTT	2 cut(s)	543, 575
FaqI	GGGAC	2 cut(s)	1007, 1585
FatI	CATG	6 cut(s)	226, 314, 617, 789, 1180, 1347
FauI	CCCGC	2 cut(s)	15, 327
FauNDI	CATATG	2 cut(s)	439, 989
FbaI	TGATCA	2 cut(s)	451, 973
FblI	GTMKAC	2 cut(s)	487, 622
Fnu4HI	GCNGC	3 cut(s)	672, 1290, 1445
FokI	GGATG	7 cut(s)	335, 498, 661, 1284, 1377, 1493, 1562
Fsp4HI	GCNGC	3 cut(s)	672, 1290, 1445
FspBI	CTAG	1 cut(s)	1334
GlaI	GCGC	1 cut(s)	174
GluI	GCNGC	3 cut(s)	672, 1290, 1445
GsaI	CCCAGC	1 cut(s)	356
GsuI	CTGGAG	3 cut(s)	793, 1056, 1359
HaeII	RGCGCY	1 cut(s)	176
HaeIII	GGCC	3 cut(s)	155, 300, 1447
HapII	CCGG	2 cut(s)	110, 750
HhaI	GCGC	1 cut(s)	175
Hin1II	CATG	6 cut(s)	230, 318, 621, 793, 1184, 1351
Hin6I	GCGC	1 cut(s)	173
HinP1I	GCGC	1 cut(s)	173
HincII	GTYRAC	1 cut(s)	1054
HindII	GTYRAC	1 cut(s)	1054
HinfI	GANTC	9 cut(s)	59, 418, 564, 1130, 1151, 1201, 1241, 1457, 1556
HpaI	GTTAAC	1 cut(s)	1054
HpaII	CCGG	2 cut(s)	110, 750
HphI	GGTGA	2 cut(s)	52, 1556
Hpy166II	GTNNAC	6 cut(s)	488, 613, 623, 1054, 1174, 1381
Hpy188III	TCNNGA	6 cut(s)	46, 193, 540, 709, 958, 1181
Hpy8I	GTNNAC	6 cut(s)	488, 613, 623, 1054, 1174, 1381
Hpy99I	CGWCG	2 cut(s)	79, 1005
HpyAV	CCTTC	2 cut(s)	586, 962
HpyCH4III	ACNGT	5 cut(s)	310, 664, 691, 1115, 1178
HpyCH4IV	ACGT	2 cut(s)	361, 1396
HpyF10VI	GCNNNNNNNGC	2 cut(s)	152, 285
HpyF3I	CTNAG	4 cut(s)	679, 1341, 1461, 1614
HpySE526I	ACGT	2 cut(s)	361, 1396
Hsp92II	CATG	6 cut(s)	230, 318, 621, 793, 1184, 1351
HspAI	GCGC	1 cut(s)	173
Ksp22I	TGATCA	2 cut(s)	451, 973
KspAI	GTTAAC	1 cut(s)	1054
Kzo9I	GATC	9 cut(s)	42, 426, 444, 451, 894, 973, 1222, 1344, 1351
LmnI	GCTCC	2 cut(s)	245, 1286
Lsp1109I	GCAGC	2 cut(s)	658, 1276
LweI	GCATC	4 cut(s)	331, 683, 1306, 1421
MaeI	CTAG	1 cut(s)	1334
MaeII	ACGT	2 cut(s)	361, 1396
MaeIII	GTNAC	4 cut(s)	310, 493, 1242, 1428
MalI	GATC	9 cut(s)	44, 428, 446, 453, 896, 975, 1224, 1346, 1353
MboI	GATC	9 cut(s)	42, 426, 444, 451, 894, 973, 1222, 1344, 1351
MflI	RGATCY	2 cut(s)	1222, 1351
MlsI	TGGCCA	1 cut(s)	300
MluCI	AATT	5 cut(s)	506, 717, 888, 1005, 1089
MluNI	TGGCCA	1 cut(s)	300
MlyI	GAGTC	5 cut(s)	53, 573, 1195, 1250, 1466
MmeI	TCCRAC	3 cut(s)	57, 539, 901
MnlI	CCTC	8 cut(s)	145, 423, 432, 688, 749, 854, 1030, 1584
Mox20I	TGGCCA	1 cut(s)	300
Mph1103I	ATGCAT	1 cut(s)	382
MscI	TGGCCA	1 cut(s)	300
MseI	TTAA	5 cut(s)	240, 1053, 1188, 1596, 1636
MslI	CAYNNNNRTG	4 cut(s)	1044, 1179, 1376, 1395
Msp20I	TGGCCA	1 cut(s)	300
MspI	CCGG	2 cut(s)	110, 750
MspR9I	CCNGG	3 cut(s)	222, 297, 772
Mva1269I	GAATGC	2 cut(s)	27, 783
MvaI	CCWGG	3 cut(s)	222, 297, 772
MwoI	GCNNNNNNNGC	2 cut(s)	152, 285
NdeI	CATATG	2 cut(s)	439, 989
NdeII	GATC	9 cut(s)	42, 426, 444, 451, 894, 973, 1222, 1344, 1351
NlaIII	CATG	6 cut(s)	230, 318, 621, 793, 1184, 1351
NlaIV	GGNNCC	7 cut(s)	688, 762, 814, 1018, 1224, 1233, 1353
NmeAIII	GCCGAG	1 cut(s)	1187
NmuCI	GTSAC	3 cut(s)	310, 1242, 1428
NsiI	ATGCAT	1 cut(s)	382
NspI	RCATGY	1 cut(s)	318
NspV	TTCGAA	1 cut(s)	396
OliI	CACNNNNGTG	2 cut(s)	1044, 1376
PagI	TCATGA	1 cut(s)	1180
PctI	GAATGC	2 cut(s)	27, 783
PfeI	GAWTC	4 cut(s)	418, 1130, 1151, 1556
PflMI	CCANNNNNTGG	1 cut(s)	1079
PkrI	GCNGC	3 cut(s)	673, 1291, 1446
PleI	GAGTC	5 cut(s)	53, 572, 1195, 1249, 1465
PmaCI	CACGTG	1 cut(s)	1397
PmlI	CACGTG	1 cut(s)	1397
PpsI	GAGTC	5 cut(s)	53, 572, 1195, 1249, 1465
Ppu21I	YACGTR	1 cut(s)	1397
PpuMI	RGGWCCY	1 cut(s)	1231
PshAI	GACNNNNGTC	2 cut(s)	999, 1113
Psp5II	RGGWCCY	1 cut(s)	1231
Psp6I	CCWGG	3 cut(s)	220, 295, 770
PspCI	CACGTG	1 cut(s)	1397
PspFI	CCCAGC	1 cut(s)	352
PspGI	CCWGG	3 cut(s)	220, 295, 770
PspN4I	GGNNCC	7 cut(s)	688, 762, 814, 1018, 1224, 1233, 1353
PspPI	GGNCC	2 cut(s)	761, 1231
PspPPI	RGGWCCY	1 cut(s)	1231
PstNI	CAGNNNCTG	1 cut(s)	1079
PsuI	RGATCY	2 cut(s)	1222, 1351
RsaI	GTAC	5 cut(s)	612, 661, 819, 1173, 1324
RsaNI	GTAC	5 cut(s)	611, 660, 818, 1172, 1323
RseI	CAYNNNNRTG	4 cut(s)	1044, 1179, 1376, 1395
SaqAI	TTAA	5 cut(s)	240, 1053, 1188, 1596, 1636
SatI	GCNGC	3 cut(s)	672, 1290, 1445
Sau3AI	GATC	9 cut(s)	42, 426, 444, 451, 894, 973, 1222, 1344, 1351
Sau96I	GGNCC	2 cut(s)	761, 1231
SchI	GAGTC	5 cut(s)	53, 573, 1195, 1250, 1466
ScrFI	CCNGG	3 cut(s)	222, 297, 772
SfaNI	GCATC	4 cut(s)	331, 683, 1306, 1421
SfcI	CTRYAG	1 cut(s)	306
SfuI	TTCGAA	1 cut(s)	396
SinI	GGWCC	2 cut(s)	761, 1231
SmiMI	CAYNNNNRTG	4 cut(s)	1044, 1179, 1376, 1395
SmlI	CTYRAG	2 cut(s)	191, 958
SmoI	CTYRAG	2 cut(s)	191, 958
SpeI	ACTAGT	1 cut(s)	1333
Sse9I	AATT	5 cut(s)	506, 717, 888, 1005, 1089
SsiI	CCGC	5 cut(s)	8, 113, 320, 467, 1444
SspMI	CTAG	1 cut(s)	1334
StyD4I	CCNGG	3 cut(s)	220, 295, 770
StyI	CCWWGG	1 cut(s)	1581
TaaI	ACNGT	5 cut(s)	310, 664, 691, 1115, 1178
TaiI	ACGT	2 cut(s)	364, 1399
TaqI	TCGA	5 cut(s)	45, 325, 396, 708, 1003
TasI	AATT	5 cut(s)	506, 717, 888, 1005, 1089
TatI	WGTACW	3 cut(s)	610, 1171, 1322
TauI	GCSGC	1 cut(s)	1447
TfiI	GAWTC	4 cut(s)	418, 1130, 1151, 1556
Tru1I	TTAA	5 cut(s)	240, 1053, 1188, 1596, 1636
Tru9I	TTAA	5 cut(s)	240, 1053, 1188, 1596, 1636
TscAI	CASTG	4 cut(s)	315, 706, 935, 1383
TseFI	GTSAC	3 cut(s)	310, 1242, 1428
TseI	GCWGC	2 cut(s)	671, 1289
Tsp45I	GTSAC	3 cut(s)	310, 1242, 1428
TspDTI	ATGAA	7 cut(s)	150, 243, 284, 650, 749, 1300, 1426
TspGWI	ACGGA	1 cut(s)	1546
TspRI	CASTG	4 cut(s)	315, 706, 935, 1383
Van91I	CCANNNNNTGG	1 cut(s)	1079
VpaK11BI	GGWCC	2 cut(s)	761, 1231
XapI	RAATTY	2 cut(s)	506, 1089
XceI	RCATGY	1 cut(s)	318
XmiI	GTMKAC	2 cut(s)	487, 622
XspI	CTAG	1 cut(s)	1334
Zsp2I	ATGCAT	1 cut(s)	382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.